Pregenerated sensors for IGLC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000105906Ensembl transcript IDs: ENSMUST00000200568.2
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ATACACTTGGGCATGTTTCTGATCTCAGCCTCTGTGGGTAAAATGAAGGTTAGAGCTATGCCTTTCCCATaGTCTTGCTGTCAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IHLGMFLISASVGKMKVRAMPFP*SCCQGQ Trigger: CTGACCCTGACAGCAAGAGCATGGGAAAGGCATAGC...TCTAACCTTCATTTTACCCACAGAGGCTGAGATCAGAAACATGCCCAAGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200568.2 |
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| CDS-3UTR CAA 90 bp | GCACCAAGGATACACTTGGGCATGTTTCTGATCTCAGCCTCTGTGGGTAAAATGCACACCAGTGTGGCCTaGTTAGTCTCGAGCTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: APRIHLGMFLISASVGKMHTSVA*LVSSSS Trigger: TGAAGAGCTCGAGACTAACAAGGCCACACTGGTGTG...CATTTTACCCACAGAGGCTGAGATCAGAAACATGCCCAAGTGTATCCTTGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200568.2 |
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| CDS-3UTR CAA 90 bp | ATACACTTGGGCATGTTTCTGATCTCAGCCTCTGTGGGTAAAATGAAGGTTAGAGCCTTTCCCATGCTCTaGCTGTCAGGGTCAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: IHLGMFLISASVGKMKVRAFPML*LSGSGS Trigger: GCTACCTGACCCTGACAGCAAGAGCATGGGAAAGGC...TCTAACCTTCATTTTACCCACAGAGGCTGAGATCAGAAACATGCCCAAGTGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200568.2 |
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