Pregenerated sensors for IGHV9-2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094102

Ensembl transcript IDs: ENSMUST00000103472.4

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGGCAGTGCTGGCAGAGGTTTCCAAAGAAAAGGCAAACCGTCCCTTaGAGTCGTCAGCATATGTTGGCTCTCCAGAGTAGGTGTTTATCC	+
Preference number: 5 (lower is better) Translates to: RQCWQRFPKKRQTVP*SRQHMLALQSRCLS Trigger: GGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAAACCTCTGCCAGCACTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103472.4
CDS CCA 90 bp	TTCCAAAGAAAAGGCAAACCGTCCCTTGAAGTCGTCAGCATATGTTaGCTCTCCAGAGTAGGTGTTTATCCAGCCCATCCACTTGAAACC	+
Preference number: 5 (lower is better) Translates to: FQRKGKPSLEVVSIC*LSRVGVYPAHPLET Trigger: GGTTTCAAGTGGATGGGCTGGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTTTCTTTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103472.4
CDS TCA 72 bp	AGCTCAGGTCCAGACTGCACGAACTGGATCTGTGCTTaGGCCCTTTGGGCAGCTGCCATCAGGAATAGCAAG	+
Preference number: 6 (lower is better) Translates to: SSGPDCTNWICA*ALWAAAIRNSK Trigger: CTTGCTATTCCTGATGGCAGCTGCCCAAAGGGCTCAAGCACAGATCCAGTTCGTGCAGTCTGGACCTGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103472.4
CDS CCA 72 bp	AAAGGCAAACCGTCCCTTGAAGTCGTCAGCATATGTTaGCTCTCCAGAGTAGGTGTTTATCCAGCCCATCCA	+
Preference number: 6 (lower is better) Translates to: KGKPSLEVVSIC*LSRVGVYPAHP Trigger: TGGATGGGCTGGATAAACACCTACTCTGGAGAGCCAACATATGCTGACGACTTCAAGGGACGGTTTGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103472.4

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