Pregenerated sensors for IGHV8-5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000102364Ensembl transcript IDs: ENSMUST00000194257.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CAA 72 bp | GTGATCTTGAGGAATACCTGGTTGTTGGAGGTATCCTaGGAGATTGTGAGCCGGCTCTTCAGGGATGGGTTA | + |
Preference number: 6 (lower is better) Translates to: VILRNTWLLEVS*EIVSRLFRDGL Trigger: TAACCCATCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194257.2 |
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CDS CAA 72 bp | TATGTGGCAGTATCTGCAGTGTCCACACTGGTGATCTaGAGGAATACCTGGTTGTTGGAGGTATCCTTGGAG | + |
Preference number: 6 (lower is better) Translates to: YVAVSAVSTLVI*RNTWLLEVSLE Trigger: CTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCACCAGTGTGGACACTGCAGATACTGCCACATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194257.2 |