Pregenerated sensors for IGHV8-2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000102301

Ensembl transcript IDs: ENSMUST00000195037.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGTGATGGCTGCAATATCCCAGGGCCAGACACTTTCAGAGTAACCTaGGATAGGACATATGCAGGGACAGGCAGCAGCAGCAGGAATGAG	+
Preference number: 5 (lower is better) Translates to: CDGCNIPGPDTFRVT*DRTYAGTGSSSRNE Trigger: CTCATTCCTGCTGCTGCTGCCTGTCCCTGCATATGTCCTATCTCAGGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS TCA 90 bp	TACCAGAAGTACTCAGTGAAATCCCAGAGAAAGTACAGGCCAGGCTaGGAGTCTGTGATGGCTGCAATATCCCAGGGCCAGACACTTTCA	+
Preference number: 5 (lower is better) Translates to: YQKYSVKSQRKYRPG*ESVMAAISQGQTLS Trigger: TGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTACTTCTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS TCA 72 bp	TGCAATATCCCAGGGCCAGACACTTTCAGAGTAACCTaGGATAGGACATATGCAGGGACAGGCAGCAGCAGC	+
Preference number: 6 (lower is better) Translates to: CNIPGPDTFRVT*DRTYAGTGSSS Trigger: GCTGCTGCTGCCTGTCCCTGCATATGTCCTATCTCAGGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS TCA 72 bp	TACTCAGTGAAATCCCAGAGAAAGTACAGGCCAGGCTaGGAGTCTGTGATGGCTGCAATATCCCAGGGCCAG	+
Preference number: 6 (lower is better) Translates to: YSVKSQRKYRPG*ESVMAAISQGQ Trigger: CTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS GCA 72 bp	GAGAAAGTACAGGCCAGGCTGAGAGTCTGTGATGGCTaGAATATCCCAGGGCCAGACACTTTCAGAGTAACC	+
Preference number: 6 (lower is better) Translates to: EKVQARLRVCDG*NIPGPDTFRVT Trigger: GGTTACTCTGAAAGTGTCTGGCCCTGGGATATTGCAGCCATCACAGACTCTCAGCCTGGCCTGTACTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS TCA 72 bp	ACGAAGCCAGCTCAAACCCATACCAGAAGTACTCAGTaGAATCCCAGAGAAAGTACAGGCCAGGCTGAGAGT	+
Preference number: 6 (lower is better) Translates to: TKPAQTHTRSTQ*NPRESTGQAES Trigger: ACTCTCAGCCTGGCCTGTACTTTCTCTGGGATTTCACTGAGTACTTCTGGTATGGGTTTGAGCTGGCTTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2
CDS CAA 72 bp	AAGATGGGTTGTAGTAGTTATCATTATTCCAAATGCTaGCCAGCCACTCTAAAGCCTTCCCTGAGGGCTTAC	+
Preference number: 6 (lower is better) Translates to: KMGCSSYHYSKC*PATLKPSLRAY Trigger: GTAAGCCCTCAGGGAAGGCTTTAGAGTGGCTGGCAAGCATTTGGAATAATGATAACTACTACAACCCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195037.2

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