Pregenerated sensors for IGHV8-11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095170

Ensembl transcript IDs: ENSMUST00000103536.4

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 72 bp	TGGGAGGGCTGCAATATCCCAGGGCCAGACTCTTTCTaGGTAATCTGGGAGAGGACATATGCAGGAACAATC	+
Preference number: 6 (lower is better) Translates to: WEGCNIPGPDSF*VIWERTYAGTI Trigger: GATTGTTCCTGCATATGTCCTCTCCCAGATTACTCAGAAAGAGTCTGGCCCTGGGATATTGCAGCCCTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103536.4
CDS CAA 72 bp	GCGATCTTGAGGAATACCTGGTTGTTGGAGGTATCCTaGGAGATTGTGAGCCGGCTCTTCAGGGCTGTGTTA	+
Preference number: 6 (lower is better) Translates to: AILRNTWLLEVS*EIVSRLFRAVL Trigger: TAACACAGCCCTGAAGAGCCGGCTCACAATCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103536.4
CDS TCA 72 bp	ATGTGGCAGTATCTGCAGTGTCCACACTGGCGATCTTaGGGAATACCTGGTTGTTGGAGGTATCCTTGGAGA	+
Preference number: 6 (lower is better) Translates to: MWQYLQCPHWRS*GIPGCWRYPWR Trigger: TCTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103536.4
CDS CAA 72 bp	TATGTGGCAGTATCTGCAGTGTCCACACTGGCGATCTaGAGGAATACCTGGTTGTTGGAGGTATCCTTGGAG	+
Preference number: 6 (lower is better) Translates to: YVAVSAVSTLAI*RNTWLLEVSLE Trigger: CTCCAAGGATACCTCCAACAACCAGGTATTCCTCAAGATCGCCAGTGTGGACACTGCAGATACTGCCACATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103536.4

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