Pregenerated sensors for IGHV3-1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000093838Ensembl transcript IDs: ENSMUST00000103478.4
Found 1 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | GTTCTTAGATGTGTCATGAGTGATGGAGATTCGACTTTTGAGGGATaGGTTGTAGTTAGTGCTACCACTGTAGCTTATGTAGCCCATCCA | + |
Preference number: 5 (lower is better) Translates to: VLRCVMSDGDSTFEG*VVVSATTVAYVAHP Trigger: TGGATGGGCTACATAAGCTACAGTGGTAGCACTAACTACAACCCATCCCTCAAAAGTCGAATCTCCATCACTCATGACACATCTAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103478.4 |