Pregenerated sensors for IGHV2-9-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095565

Ensembl transcript IDs: ENSMUST00000180013.3

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ACTCTTGGAGTTGTCTTTGCTGATGCTCAGTCTGGATTTGAGAGCTaGATTATAATTTGTGCCTCCACCAGTCCATATTACTCCAAGCCA	+
Preference number: 5 (lower is better) Translates to: TLGVVFADAQSGFES*IIICASTSPYYSKP Trigger: TGGCTTGGAGTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAACTCCAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180013.3
CDS TCA 72 bp	GTTGTCTTTGCTGATGCTCAGTCTGGATTTGAGAGCTaGATTATAATTTGTGCCTCCACCAGTCCATATTAC	+
Preference number: 6 (lower is better) Translates to: VVFADAQSGFES*IIICASTSPYY Trigger: GTAATATGGACTGGTGGAGGCACAAATTATAATTCAGCTCTCAAATCCAGACTGAGCATCAGCAAAGACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180013.3

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