Pregenerated sensors for IGHV2-7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096824

Ensembl transcript IDs: ENSMUST00000103456.4

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ACAGCCGTGTCTTCACTTTGCAGACTGCTCATTTTAAAGAAAACTTaGCTCTTAGAGGTGTCCCTGCTGACACTCAGTCGGGAACTGAGA	+
Preference number: 5 (lower is better) Translates to: TAVSSLCRLLILKKT*LLEVSLLTLSRELR Trigger: TCTCAGTTCCCGACTGAGTGTCAGCAGGGACACCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103456.4
CDS CAA 90 bp	CACAGCCGTGTCTTCACTTTGCAGACTGCTCATTTTAAAGAAAACTaGGCTCTTAGAGGTGTCCCTGCTGACACTCAGTCGGGAACTGAG	+
Preference number: 6 (lower is better) Translates to: HSRVFTLQTAHFKEN*ALRGVPADTQSGTE Trigger: CTCAGTTCCCGACTGAGTGTCAGCAGGGACACCTCTAAGAGCCAAGTTTTCTTTAAAATGAGCAGTCTGCAAAGTGAAGACACGGCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103456.4
CDS GCA 72 bp	TTCCTCCCAACCATTCCAATCCCTTTCTCGGAGGCTTaGGAAACCAATGTACACCATAGCTACTTAATGAGA	+
Preference number: 6 (lower is better) Translates to: FLPTIPIPFSEA*ETNVHHSYLMR Trigger: TCTCATTAAGTAGCTATGGTGTACATTGGTTTCGCAAGCCTCCGAGAAAGGGATTGGAATGGTTGGGAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103456.4

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