Pregenerated sensors for IGHV16-1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076661

Ensembl transcript IDs: ENSMUST00000103470.2, ENSMUST00000195641.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CCAGGCTGTCCCAAGCTGCCTCCAGATTCCACCAGCTaGACCTCACCCTGTATGCCTTTTAAAATAACAAGG	+
Preference number: 6 (lower is better) Translates to: PGCPKLPPDSTS*TSPCMPFKITR Trigger: CCTTGTTATTTTAAAAGGCATACAGGGTGAGGTGCAGCTGGTGGAATCTGGAGGCAGCTTGGGACAGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195641.2
CDS GCA 72 bp	CATCATGGTTTGTATTTGCTAACCATTCTAGCCTCATaGCTGGGGCTTGGCGAAACCAGTCCATCCAATGAT	+
Preference number: 6 (lower is better) Translates to: HHGLYLLTILAS*LGLGETSPSND Trigger: ATCATTGGATGGACTGGTTTCGCCAAGCCCCAGGCATGAGGCTAGAATGGTTAGCAAATACAAACCATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103470.2 ENSMUST00000195641.2

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