Pregenerated sensors for IGHV11-2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096108

Ensembl transcript IDs: ENSMUST00000103468.3

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TCTGAAGATAGTGAATCGATCCTTTATGGATGGTGCGTAGTTTATTaGACTGCCATCAGAATTAATGTCTCCAATCCACTCCAGGGTCTT	+
Preference number: 5 (lower is better) Translates to: SEDSESILYGWCVVY*TAIRINVSNPLQGL Trigger: AAGACCCTGGAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACTATCTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103468.3
CDS CAA 72 bp	ACATTGCTCATCTGCAGGTACAGGGTGCTCTTGTCATaGTCTCTGAAGATAGTGAATCGATCCTTTATGGAT	+
Preference number: 6 (lower is better) Translates to: TLLICRYRVLLS*SLKIVNRSFMD Trigger: ATCCATAAAGGATCGATTCACTATCTTCAGAGACAATGACAAGAGCACCCTGTACCTGCAGATGAGCAATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103468.3
CDS GCA 72 bp	AGTGAATCGATCCTTTATGGATGGTGCGTAGTTTATTaGACTGCCATCAGAATTAATGTCTCCAATCCACTC	+
Preference number: 6 (lower is better) Translates to: SESILYGWCVVY*TAIRINVSNPL Trigger: GAGTGGATTGGAGACATTAATTCTGATGGCAGTGCAATAAACTACGCACCATCCATAAAGGATCGATTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103468.3

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