Pregenerated sensors for IGHV1-84 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094940

Ensembl transcript IDs: ENSMUST00000103551.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	AGCTCAGGTCCAGACTGCTGCAGCTGGATCTGGCAATaGACACCTGCAGTTCCTGACAGGAGGAAAAGAAAG	+
Preference number: 6 (lower is better) Translates to: SSGPDCCSWIWQ*TPAVPDRRKRK Trigger: CTTTCTTTTCCTCCTGTCAGGAACTGCAGGTGTCCATTGCCAGATCCAGCTGCAGCAGTCTGGACCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103551.2
CDS CAA 72 bp	GCTGTGCTGGAGGATGTGTCTACAGTCAATGTGGCCTaGCCCTTGAACTTCTCATTGTACTTAGTATTACCG	+
Preference number: 6 (lower is better) Translates to: AVLEDVSTVNVA*PLNFSLYLVLP Trigger: CGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAGCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103551.2
CDS CAA 72 bp	CTGGAGGATGTGTCTACAGTCAATGTGGCCTTGCCCTaGAACTTCTCATTGTACTTAGTATTACCGCTTCCA	+
Preference number: 6 (lower is better) Translates to: LEDVSTVNVALP*NFSLYLVLPLP Trigger: TGGAAGCGGTAATACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGTAGACACATCCTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103551.2

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