Pregenerated sensors for IGHV1-78 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096326

Ensembl transcript IDs: ENSMUST00000163670.2, ENSMUST00000199373.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	GCTGTGCTGGAGGATTTGTCTGCAGTCAATGTGGCCTaGCCCTTGAACTTCTCATTGTACTTAGTACTACCA	+
Preference number: 6 (lower is better) Translates to: AVLEDLSAVNVA*PLNFSLYLVLP Trigger: TGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAGCACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163670.2 ENSMUST00000199373.2
CDS CAA 72 bp	CTGGAGGATTTGTCTGCAGTCAATGTGGCCTTGCCCTaGAACTTCTCATTGTACTTAGTACTACCATCTCTA	+
Preference number: 6 (lower is better) Translates to: LEDLSAVNVALP*NFSLYLVLPSL Trigger: TAGAGATGGTAGTACTAAGTACAATGAGAAGTTCAAGGGCAAGGCCACATTGACTGCAGACAAATCCTCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163670.2 ENSMUST00000199373.2

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