Pregenerated sensors for IGHV1-77 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096452

Ensembl transcript IDs: ENSMUST00000170551.2, ENSMUST00000198777.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGGCTGTGCTGGAGGATTTGTCTGCAGTCAGTGTGGCCTTGCCCTTaGACTTCTCATTGTAGTAAGTACTACCACTTCCAGGACCAATCT	+
Preference number: 5 (lower is better) Translates to: RLCWRICLQSVWPCP*TSHCSKYYHFQDQS Trigger: AGATTGGTCCTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCAGCACAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170551.2 ENSMUST00000198777.2
CDS TCA 72 bp	TGGAGGATTTGTCTGCAGTCAGTGTGGCCTTGCCCTTaGACTTCTCATTGTAGTAAGTACTACCACTTCCAG	+
Preference number: 6 (lower is better) Translates to: WRICLQSVWPCP*TSHCSKYYHFQ Trigger: CTGGAAGTGGTAGTACTTACTACAATGAGAAGTTCAAGGGCAAGGCCACACTGACTGCAGACAAATCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170551.2 ENSMUST00000198777.2

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