Pregenerated sensors for IGHV1-69 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094502

Ensembl transcript IDs: ENSMUST00000103539.3, ENSMUST00000199933.5

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	GCTGGAGGATTTGTCTACAGTCAATGTGGACTTGCCCTTGAACTTTaGATTGTAGTTAGTATAACTATCAGAAGGATCAATCTCTCCGAT	+
Preference number: 6 (lower is better) Translates to: AGGFVYSQCGLALEL*IVVSITIRRINLSD Trigger: ATCGGAGAGATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGTCCACATTGACTGTAGACAAATCCTCCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103539.3 ENSMUST00000199933.5
CDS CAA 72 bp	TTTGTCTACAGTCAATGTGGACTTGCCCTTGAACTTTaGATTGTAGTTAGTATAACTATCAGAAGGATCAAT	+
Preference number: 6 (lower is better) Translates to: FVYSQCGLALEL*IVVSITIRRIN Trigger: ATTGATCCTTCTGATAGTTATACTAACTACAATCAAAAGTTCAAGGGCAAGTCCACATTGACTGTAGACAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103539.3 ENSMUST00000199933.5

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