Pregenerated sensors for IGHV1-49 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000076710

Ensembl transcript IDs: ENSMUST00000103519.2, ENSMUST00000192724.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	AAAGATCCTATCCATTCCAGGCCATGTCCAGGTCTTTaGTTCACCCAGTGCATAGCACTGGCCATGAAGGCA	+
Preference number: 6 (lower is better) Translates to: KDPIHSRPCPGL*FTQCIALAMKA Trigger: TGCCTTCATGGCCAGTGCTATGCACTGGGTGAAGCAAAGACCTGGACATGGCCTGGAATGGATAGGATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103519.2 ENSMUST00000192724.2
CDS CAA 72 bp	GCTGTGCTCGAGGATGTGTTTGCAGTCAATGTGGCCTaGCCCTTGAAGTTTTCACTGTACTCAGTAGCATCA	+
Preference number: 6 (lower is better) Translates to: AVLEDVFAVNVA*PLKFSLYSVAS Trigger: TGATGCTACTGAGTACAGTGAAAACTTCAAGGGCAAGGCCACATTGACTGCAAACACATCCTCGAGCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103519.2 ENSMUST00000192724.2
CDS CAA 72 bp	CTCGAGGATGTGTTTGCAGTCAATGTGGCCTTGCCCTaGAAGTTTTCACTGTACTCAGTAGCATCACTGTAC	+
Preference number: 6 (lower is better) Translates to: LEDVFAVNVALP*KFSLYSVASLY Trigger: GTACAGTGATGCTACTGAGTACAGTGAAAACTTCAAGGGCAAGGCCACATTGACTGCAAACACATCCTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103519.2 ENSMUST00000192724.2

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