Pregenerated sensors for IGHV1-19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096410

Ensembl transcript IDs: ENSMUST00000103505.3, ENSMUST00000193855.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	AGCACAGGTCCAGACTGTTGCAGCTGGACCTCAGAGTaGACACCTGCAGTTCCTGACAGGAGGAAGAGAAAG	+
Preference number: 6 (lower is better) Translates to: STGPDCCSWTSE*TPAVPDRRKRK Trigger: CTTTCTCTTCCTCCTGTCAGGAACTGCAGGTGTCCACTCTGAGGTCCAGCTGCAACAGTCTGGACCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193855.2
CDS TCA 72 bp	CTGTTGCAGCTGGACCTCAGAGTGGACTGCAGTTCCTaGCAGGAGGAAGAGAAAGATCCAGCTCCATCCCAT	+
Preference number: 6 (lower is better) Translates to: LLQLDLRVDCSS*QEEEKDPAPSH Trigger: ATGGGATGGAGCTGGATCTTTCTCTTCCTCCTGTCAGGAACTGCAGTCCACTCTGAGGTCCAGCTGCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103505.3
CDS CCA 72 bp	AGCACAGGTCCAGACTGTTGCAGCTGGACCTCAGAGTaGACTGCAGTTCCTGACAGGAGGAAGAGAAAGATC	+
Preference number: 6 (lower is better) Translates to: STGPDCCSWTSE*TAVPDRRKRKI Trigger: GATCTTTCTCTTCCTCCTGTCAGGAACTGCAGTCCACTCTGAGGTCCAGCTGCAACAGTCTGGACCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103505.3

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