Pregenerated sensors for IGHV1-11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000102888

Ensembl transcript IDs: ENSMUST00000191801.2

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 72 bp	CTGTTGCAGCTGGATCTGGGAGTAGGCACATGTAATTaGTGCCACCAGAAAGAGGGTGATCTGGCTCCATCC	+
Preference number: 6 (lower is better) Translates to: LLQLDLGVGTCN*CHQKEGDLAPS Trigger: GGATGGAGCCAGATCACCCTCTTTCTGGTGGCAGCAATTACATGTGCCTACTCCCAGATCCAGCTGCAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191801.2
CDS GCA 72 bp	TTGCAGCTGGATCTGGGAGTAGGCACATGTAATTGCTaGCACCAGAAAGAGGGTGATCTGGCTCCATCCCAT	+
Preference number: 6 (lower is better) Translates to: LQLDLGVGTCNC*HQKEGDLAPSH Trigger: ATGGGATGGAGCCAGATCACCCTCTTTCTGGTGGCAGCAATTACATGTGCCTACTCCCAGATCCAGCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191801.2
CDS CAA 90 bp	GCTGGAGGACCGGTCTACAGAGAATGTGGCCTTGCCCATGAACTTTaGATTGTAGTTAGTTTCACCACTTACTGGATAAATCCTTCCAAT	+
Preference number: 6 (lower is better) Translates to: AGGPVYRECGLAHEL*IVVSFTTYWINPSN Trigger: ATTGGAAGGATTTATCCAGTAAGTGGTGAAACTAACTACAATCAAAAGTTCATGGGCAAGGCCACATTCTCTGTAGACCGGTCCTCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191801.2
CDS CAA 72 bp	CCGGTCTACAGAGAATGTGGCCTTGCCCATGAACTTTaGATTGTAGTTAGTTTCACCACTTACTGGATAAAT	+
Preference number: 6 (lower is better) Translates to: PVYRECGLAHEL*IVVSFTTYWIN Trigger: ATTTATCCAGTAAGTGGTGAAACTAACTACAATCAAAAGTTCATGGGCAAGGCCACATTCTCTGTAGACCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191801.2

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