RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGHMBP2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024831

Ensembl transcript IDs: ENSMUST00000025751.11, ENSMUST00000119292.8, ENSMUST00000154537.8

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCCTTCAGATCCAGCTGTACAGGGCAATGTGCCTGCACGACGGTaGCGGGCTCCTCTGCCCGAGGCTCAGGCTCAGCCTGTGCAGGGC +
Preference number: 1 (lower is better)
Translates to: VPSDPAVQGNVPARR*RAPLPEAQAQPVQG
Trigger: GCCCTGCACAGGCTGAGCCTGAGCCTCGGGCAGAGGAGCCCGTCACCGTCGTGCAGGCACATTGCCCTGTACAGCTGGATCTGAAGGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp GCCCGGGGGCTTCTCGCTTGGCTTCCTGCGGCCATGTCTAGGGGCTaGTCTGGTCTCCTGGCCACTCTCCTGATCACTGGCAGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: ARGLLAWLPAAMSRG*SGLLATLLITGRLP
Trigger: AGGAAGCCTGCCAGTGATCAGGAGAGTGGCCAGGAGACCAGAGCAGCCCCTAGACATGGCCGCAGGAAGCCAAGCGAGAAGCCCCCGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp GTCACGCCTGGGAGGTCCTTCAGGAGGTGTCCTGCCACAGAGGGATaGGAAGTAAGCTGCCCGTGGTACATGGCCTCCGAGGCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: VTPGRSFRRCPATEG*EVSCPWYMASEAQH
Trigger: GTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCCAGGCGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 90 bp CTGCTCTGGTCTCCTGGCCACTCTCCTGATCACTGGCAGGCTTCCTaGTGGAGGTGCTGGGGCACTTGGGTTTGGGGACACGGCTGTGGC +
Preference number: 1 (lower is better)
Translates to: LLWSPGHSPDHWQAS*WRCWGTWVWGHGCG
Trigger: GCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTCCATCAGGAAGCCTGCCAGTGATCAGGAGAGTGGCCAGGAGACCAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 90 bp CTGCGGCCATGTCTAGGGGCTGCTCTGGTCTCCTGGCCACTCTCCTaGTCACTGGCAGGCTTCCTGATGGAGGTGCTGGGGCACTTGGGT +
Preference number: 1 (lower is better)
Translates to: LRPCLGAALVSWPLS*SLAGFLMEVLGHLG
Trigger: ACCCAAGTGCCCCAGCACCTCCATCAGGAAGCCTGCCAGTGATCAGGAGAGTGGCCAGGAGACCAGAGCAGCCCCTAGACATGGCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp GCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTaGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: AGEGAVSEGEQCMGP*KDYFPPVTKQQRPG
Trigger: GCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR TCA 90 bp TGTCCTCCTCCTCCAGCTCCAGAAGCCCACAGCCAGCGGTGTCTATaGGCAGCAGCGGGACACGTGTCTCCTCTGTGTCAGTCACGCCTG +
Preference number: 1 (lower is better)
Translates to: CPPPPAPEAHSQRCL*AAAGHVSPLCQSRL
Trigger: CAGGCGTGACTGACACAGAGGAGACACGTGTCCCGCTGCTGCTCATAGACACCGCTGGCTGTGGGCTTCTGGAGCTGGAGGAGGAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp AGGTCCTTCAGGAGGTGTCCTGCCACAGAGGGATGGGAAGTAAGCTaGCCGTGGTACATGGCCTCCGAGGCCCAGCACATGATGGCCTGG +
Preference number: 1 (lower is better)
Translates to: RSFRRCPATEGWEVS*PWYMASEAQHMMAW
Trigger: CCAGGCCATCATGTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp CCCTCCCCGGTGCTGTCGTGCCTCAGCCCGAACTCCTCAGCTAACTaGTGGACTCGCAGCCTGTCATGGGAACTCAGGGATGTGGGAAAC +
Preference number: 1 (lower is better)
Translates to: PSPVLSCLSPNSSAN*WTRSLSWELRDVGN
Trigger: GTTTCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTTCGGGCTGAGGCACGACAGCACCGGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp CTCCTCTGTGTCAGTCACGCCTGGGAGGTCCTTCAGGAGGTGTCCTaGCACAGAGGGATGGGAAGTAAGCTGCCCGTGGTACATGGCCTC +
Preference number: 1 (lower is better)
Translates to: LLCVSHAWEVLQEVS*HRGMGSKLPVVHGL
Trigger: GAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCCAGGCGTGACTGACACAGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp CTGAGCCTGGGAGCTTTGCTGCCGCTGCAGCCTCTCCAGATGCAGTaGCTTCAGATCCAGCTGTACAGGGCAATGTGCCTGCACGACGGT +
Preference number: 1 (lower is better)
Translates to: LSLGALLPLQPLQMQ*LQIQLYRAMCLHDG
Trigger: ACCGTCGTGCAGGCACATTGCCCTGTACAGCTGGATCTGAAGGCACTGCATCTGGAGAGGCTGCAGCGGCAGCAAAGCTCCCAGGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp TCCCCGGTGCTGTCGTGCCTCAGCCCGAACTCCTCAGCTAACTGGTaGACTCGCAGCCTGTCATGGGAACTCAGGGATGTGGGAAACTCC +
Preference number: 1 (lower is better)
Translates to: SPVLSCLSPNSSANW*TRSLSWELRDVGNS
Trigger: GGAGTTTCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTTCGGGCTGAGGCACGACAGCACCGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp CAGCTAGGATGCACTTTGGGGCCTTCAGCAGGGGGATCCAGCAGCTaGCTTCTAGGGCCTGGGCACATTCGTCCACCACCACCACATCAA +
Preference number: 1 (lower is better)
Translates to: QLGCTLGPSAGGSSS*LLGPGHIRPPPPHQ
Trigger: TTGATGTGGTGGTGGTGGACGAATGTGCCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCCTGCTGAAGGCCCCAAAGTGCATCCTAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp TTCAGGAGGTGTCCTGCCACAGAGGGATGGGAAGTAAGCTGCCCGTaGTACATGGCCTCCGAGGCCCAGCACATGATGGCCTGGTGCATT +
Preference number: 1 (lower is better)
Translates to: FRRCPATEGWEVSCP*YMASEAQHMMAWCI
Trigger: AATGCACCAGGCCATCATGTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp TATGAGCAGCAGCGGGACACGTGTCTCCTCTGTGTCAGTCACGCCTaGGAGGTCCTTCAGGAGGTGTCCTGCCACAGAGGGATGGGAAGT +
Preference number: 1 (lower is better)
Translates to: YEQQRDTCLLCVSHA*EVLQEVSCHRGMGS
Trigger: ACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCCAGGCGTGACTGACACAGAGGAGACACGTGTCCCGCTGCTGCTCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 90 bp ACATCCAGGACAGGGCTTGTGGGACCCAAAGGCACACTACAGGCGTaGAGACCCGTGTGCAGGGGCCCAAACCACACATGCTCACTTCCA +
Preference number: 1 (lower is better)
Translates to: TSRTGLVGPKGTLQA*RPVCRGPNHTCSLP
Trigger: TGGAAGTGAGCATGTGTGGTTTGGGCCCCTGCACACGGGTCTTCACGCCTGTAGTGTGCCTTTGGGTCCCACAAGCCCTGTCCTGGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 90 bp AGGAGCCCGTACAGCCATTCCCGCATCCCTAGACCACACAATCCATaGCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCATGGC +
Preference number: 1 (lower is better)
Translates to: RSPYSHSRIPRPHNP*PLCHCRRQDDGGHG
Trigger: GCCATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCGGGAATGGCTGTACGGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR GCA 90 bp TCCATGCCAGGACGCAGACCCTGTGTAAGGGCAGTGCAGACCCTGTaGAAGAGCAGATGTGCTGGGCTGGGGAAACAGCTGAGTAGGCAA +
Preference number: 1 (lower is better)
Translates to: SMPGRRPCVRAVQTL*KSRCAGLGKQLSRQ
Trigger: TTGCCTACTCAGCTGTTTCCCCAGCCCAGCACATCTGCTCTTGCACAGGGTCTGCACTGCCCTTACACAGGGTCTGCGTCCTGGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 90 bp TGGCAAGGTCAATCTTCCACTGTGCTTTGGACCACACATGGGAGCTaGTCCCAGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAG +
Preference number: 1 (lower is better)
Translates to: WQGQSSTVLWTTHGS*SQWQSETSSLPSGQ
Trigger: CTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACTGGGAGCAGCTCCCATGTGTGGTCCAAAGCACAGTGGAAGATTGACCTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 90 bp GTTGGAGAGGCTCTGTCTGAGCAGATCCACCTGAAGGTTGTAGGGTaGGATGACGGCAATGTCACCTGCCTGGACCCCAGCATCCACCAG +
Preference number: 1 (lower is better)
Translates to: VGEALSEQIHLKVVG*DDGNVTCLDPSIHQ
Trigger: CTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGCCGTCATCGCACCCTACAACCTTCAGGTGGATCTGCTCAGACAGAGCCTCTCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp CACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTaGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCA +
Preference number: 1 (lower is better)
Translates to: HCVTAEDRMTVAMAS*PCKALKASMGPGQA
Trigger: TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CCA 90 bp TACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATaGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGA +
Preference number: 1 (lower is better)
Translates to: YRVLARVQSLRVSSV*GPGRTTSHQSPSSR
Trigger: TCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR GCA 90 bp CGAGTGATTCCTGGGACCACACCATGGAAGGAGAGGCCTGATGGCTaGTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTAT +
Preference number: 1 (lower is better)
Translates to: RVIPGTTPWKERPDG*WRLDSHTHADLSKY
Trigger: ATACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCCCAGGAATCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 90 bp CAGATCCACCTGAAGGTTGTAGGGTGCGATGACGGCAATGTCACCTaGCTGGACCCCAGCATCCACCAGAGCCTGGATGTGCAAAGTGAC +
Preference number: 1 (lower is better)
Translates to: QIHLKVVGCDDGNVT*LDPSIHQSLDVQSD
Trigger: GTCACTTTGCACATCCAGGCTCTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGCCGTCATCGCACCCTACAACCTTCAGGTGGATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp GTGATTCCTGGGACCACACCATGGAAGGAGAGGCCTGATGGCTGCTaGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTATGCA +
Preference number: 1 (lower is better)
Translates to: VIPGTTPWKERPDGC*RLDSHTHADLSKYA
Trigger: TGCATACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCCCAGGAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 90 bp CCAGGAATGGCAAGGTCAATCTTCCACTGTGCTTTGGACCACACATaGGAGCTGCTCCCAGTGGCAATCCGAGACCTCGTCTCTCCCCAG +
Preference number: 1 (lower is better)
Translates to: PGMARSIFHCALDHT*ELLPVAIRDLVSPQ
Trigger: CTGGGGAGAGACGAGGTCTCGGATTGCCACTGGGAGCAGCTCCCATGTGTGGTCCAAAGCACAGTGGAAGATTGACCTTGCCATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 90 bp CTCAGCCCGAACTCCTCAGCTAACTGGTGGACTCGCAGCCTGTCATaGGAACTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTA +
Preference number: 1 (lower is better)
Translates to: LSPNSSANWWTRSLS*ELRDVGNSNWDSLL
Trigger: TAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTTCGGGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp AGCAGATGTGCTGGGCTGGGGAAACAGCTGAGTAGGCAAACCACTTaGCATTCAAACAGGAGAACCCGAGTTCAGATCCCCAGCACCCAC +
Preference number: 1 (lower is better)
Translates to: SRCAGLGKQLSRQTT*HSNRRTRVQIPSTH
Trigger: GTGGGTGCTGGGGATCTGAACTCGGGTTCTCCTGTTTGAATGGCAAGTGGTTTGCCTACTCAGCTGTTTCCCCAGCCCAGCACATCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 90 bp GCACCTGTGTTGGTGGCTAGAACCACATCTGCCGCAGTGAGGCTCTaGACTATGGCTGCTTCTTCCCTCTCCTTCAGTTCCTTCCTTAGC +
Preference number: 1 (lower is better)
Translates to: APVLVARTTSAAVRL*TMAASSLSFSSFLS
Trigger: GCTAAGGAAGGAACTGAAGGAGAGGGAAGAAGCAGCCATAGTTCAGAGCCTCACTGCGGCAGATGTGGTTCTAGCCACCAACACAGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 90 bp AAAGCATGGTTGTTGACAGTGTGGGAATCACAGATGACTGCCACGTaGCGCCGAGCACGGGTAACAGCAACATTAATCCGCCTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: KAWLLTVWESQMTAT*RRARVTATLIRLSS
Trigger: TGAGGACAGGCGGATTAATGTTGCTGTTACCCGTGCTCGGCGGCACGTGGCAGTCATCTGTGATTCCCACACTGTCAACAACCATGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 90 bp ACTCGCAGCCTGTCATGGGAACTCAGGGATGTGGGAAACTCCAACTaGGACTCCTTGCTAGCCACAAACTCCTCAATCGTAGCCCTAAAG +
Preference number: 1 (lower is better)
Translates to: TRSLSWELRDVGNSN*DSLLATNSSIVALK
Trigger: CTTTAGGGCTACGATTGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 90 bp TGTTGGACATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTTaGGCATGGTATCTGAGGAAGGCACACTATAGAGCATGGTGTCTG +
Preference number: 1 (lower is better)
Translates to: CWTSMGGEALGPVKA*AWYLRKAHYRAWCL
Trigger: CAGACACCATGCTCTATAGTGTGCCTTCCTCAGATACCATGCTCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGTCCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 90 bp GGCTTCCTTTTCTTCTACAGAGGGGTTTCTAGAAGGCGGGCAGAGTaGTCACTAGCCTCCAGTGCAACAAGAGCCAGTGTCTTTCCTCAA +
Preference number: 1 (lower is better)
Translates to: GFLFFYRGVSRRRAE*SLASSATRASVFPQ
Trigger: TTGAGGAAAGACACTGGCTCTTGTTGCACTGGAGGCTAGTGACCACTCTGCCCGCCTTCTAGAAACCCCTCTGTAGAAGAAAAGGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 90 bp AACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGGTaGGGAACATCCAGGACAGGGCTTGTGGGACCCAAAGGCACACTA +
Preference number: 1 (lower is better)
Translates to: NTNLESSILTKQQSG*GTSRTGLVGPKGTL
Trigger: TAGTGTGCCTTTGGGTCCCACAAGCCCTGTCCTGGATGTTCCCCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 90 bp GCACACTGTAGAGCATGGTATCTGAGGGAGGCACACTGTAGAGCATaGTGTCTGAGGGAGGCCATAAGACATTTTTCAAGCAATCAGACA +
Preference number: 1 (lower is better)
Translates to: AHCRAWYLREAHCRA*CLREAIRHFSSNQT
Trigger: TGTCTGATTGCTTGAAAAATGTCTTATGGCCTCCCTCAGACAGCATGCTCTACAGTGTGCCTCCCTCAGATACCATGCTCTACAGTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 90 bp GCACAAAGTCCCCAATGGAGGAGTTTGAGAGGGGACCAAAGAAGCTaGAGTGGTTTGCAACCCTATAGGAGGAACAACAGTATGAACACT +
Preference number: 1 (lower is better)
Translates to: AQSPQWRSLRGDQRS*SGLQPYRRNNSMNT
Trigger: AGTGTTCATACTGTTGTTCCTCCTATAGGGTTGCAAACCACTTCAGCTTCTTTGGTCCCCTCTCAAACTCCTCCATTGGGGACTTTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 90 bp CAAACCCATTGGAGGAGACACAGAGACAAAATGTGGAGTAGAGACTaGAGGAAAGGCCATCCAGAGACCTGGGCATCCATCTCATATAGT +
Preference number: 1 (lower is better)
Translates to: QTHWRRHRDKMWSRD*RKGHPETWASISYS
Trigger: ACTATATGAGATGGATGCCCAGGTCTCTGGATGGCCTTTCCTTCAGTCTCTACTCCACATTTTGTCTCTGTGTCTCCTCCAATGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 90 bp AGTGAGGTAACCCAATCACAAAGAACACACACCGTATGCGCTCTCTaGTCAGTAGATATTGGCCCTGAAGTCACACCACACACCCATGAA +
Preference number: 1 (lower is better)
Translates to: SEVTQSQRTHTVCAL*SVDIGPEVTPHTHE
Trigger: TTCATGGGTGTGTGGTGTGACTTCAGGGCCAATATCTACTGATCAGAGAGCGCATACGGTGTGTGTTCTTTGTGATTGGGTTACCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 90 bp ATTCTAAAGAATGCTGGAAAGGATGAGTTGGAGATGAAGCGTGGCTaGATCCAGAGACTCCAGGATAATATCACCAGGTCAACCTGCAGC +
Preference number: 1 (lower is better)
Translates to: ILKNAGKDELEMKRG*IQRLQDNITRSTCS
Trigger: GCTGCAGGTTGACCTGGTGATATTATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTCATCCTTTCCAGCATTCTTTAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR CCA 90 bp GCGGGACAGCCCAGCCAGTGCCGCCCTGTGAGAGACGGTGGTGGGTGGCAGCTGCTGGCTTCTAGGGCCTaGGCACATTCGTCCACCACC +
Preference number: 2 (lower is better)
Translates to: AGQPSQCRPVRDGGGWQLLASRA*AHSSTT
Trigger: GGTGGTGGACGAATGTGCCCAGGCCCTAGAAGCCAG...CAGCTGCCACCCACCACCGTCTCTCACAGGGCGGCACTGGCTGGGCTGTCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp TTCCTGATGGAGGTGCTGGGGCACTTGGGTTTGGGGACACGGCTGTGGCCCTGGCCGAGGCCCAGCACATaGTGGCCTGGTGCATTCGGT +
Preference number: 2 (lower is better)
Translates to: FLMEVLGHLGLGTRLWPWPRPST*WPGAFG
Trigger: ACCGAATGCACCAGGCCATCATGTGCTGGGCCTCGG...CCAGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTCCATCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCAGCAGCTGGGCCCTCTTaGCCGGGTCCAGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VTAEDRMTVAMASWPCKAAAGPS*PGPGPC
Trigger: ACAGGGCCCTGGACCCGGCCAAGAGGGCCCAGCTGC...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GGCGGTGAGGAAGGCTGTGGGGCTACACTGCCAGAGCTGGCAGGGCTCCTCCTGTGTGAGAGACGGTGGTaGGTGGCAGCTGTCTGTGGT +
Preference number: 2 (lower is better)
Translates to: GGEEGCGATLPELAGLLLCERRW*VAAVCG
Trigger: ACCACAGACAGCTGCCACCCACCACCGTCTCTCACA...CAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGCCTTCCTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp GGCGGTGAGGAAGGCTGTGGGGCTACACTGCCAGAGCTGGCAGGGCTCCTCCTGGCAATGTCACCTGCCTaGACCCCAGCATCCACCAGA +
Preference number: 2 (lower is better)
Translates to: GGEEGCGATLPELAGLLLAMSPA*TPASTR
Trigger: TCTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGC...CAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGCCTTCCTCACCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CAA 90 bp CGAGTCCCCACCTGGCTGACCCTTGGCTGTCTGAGCCTGGGAGCTTaGCTGCCGCTGCAGCCTCTCCAGATGCAGTGCCTTCAGATCCAG +
Preference number: 2 (lower is better)
Translates to: RVPTWLTLGCLSLGA*LPLQPLQMQCLQIQ
Trigger: CTGGATCTGAAGGCACTGCATCTGGAGAGGCTGCAGCGGCAGCAAAGCTCCCAGGCTCAGACAGCCAAGGGTCAGCCAGGTGGGGACTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp GGCGGTGAGGAAGGCTGTGGGGCTACACTGCCAGAGCTGGCAGGGCTCCTCCTGTGGAGAGGCTCTGTCTaGGCAGATCCACCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: GGEEGCGATLPELAGLLLWRGSV*ADPPEG
Trigger: ACCTTCAGGTGGATCTGCTCAGACAGAGCCTCTCCA...CAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGCCTTCCTCACCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp TGCCTCTGTCCCACACAGCCCTCCCTGAGGGTGTGGCTTCATGTCCCCCTCTCCCCAGGGCCCTGTCCTTaGTCCCACTGCCTGCATACA +
Preference number: 2 (lower is better)
Translates to: CLCPTQPSLRVWLHVPLSPGPCP*SHCLHT
Trigger: TGTATGCAGGCAGTGGGACCAAGGACAGGGCCCTGG...GGAGAGGGGGACATGAAGCCACACCCTCAGGGAGGGCTGTGTGGGACAGAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp TTCCTGATGGAGGTGCTGGGGCACTTGGGTTTGGGGACACGGCTGTGGCCCTGGGGTGGCAGCTGTCTGTaGTCCCCAGCTAGGATGCAC +
Preference number: 2 (lower is better)
Translates to: FLMEVLGHLGLGTRLWPWGGSCL*SPARMH
Trigger: GTGCATCCTAGCTGGGGACCACAGACAGCTGCCACC...CCAGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTCCATCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp CAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCGTGTCCCCACCTGCTaGCTCTGTCCCACACAGCCC +
Preference number: 2 (lower is better)
Translates to: QCMGPWKDYFPPVTKQQRRVPTC*LCPTQP
Trigger: GGGCTGTGTGGGACAGAGGCAGCAGGTGGGGACACG...CCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR TCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTTGTCCTCTGGCTGCTaGGCTCGCCCAGCTTCTTGT +
Preference number: 2 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPLSSGC*ARPASC
Trigger: ACAAGAAGCTGGGCGAGCTCAGCAGCCAGAGGACAA...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR TCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACCACACAGCCCTCCCTaGGGGTGTGGCTTCATGTCC +
Preference number: 2 (lower is better)
Translates to: VTAEDRMTVAMASWPCKAPHSPP*GCGFMS
Trigger: GGACATGAAGCCACACCCTCAGGGAGGGCTGTGTGG...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAAGCCTCCTCTGCAGCTaGGCCCTCTTGGCCGGGTCC +
Preference number: 2 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVSLLCS*ALLAGS
Trigger: GGACCCGGCCAAGAGGGCCCAGCTGCAGAGGAGGCT...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR CAA 90 bp CTGGGACCACACCATGGAAGGAGAGGCCTGATGGCTGCTGGCGGCTaGACTCCCACACACATGCTGACCTCTCCAAGTATGCACACCTCC +
Preference number: 2 (lower is better)
Translates to: LGPHHGRRGLMAAGG*TPTHMLTSPSMHTS
Trigger: GGAGGTGTGCATACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR CCA 90 bp AGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCACACTCAAAGCATCAATaGGGCCTGGCCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: SGNPRPRLSPVARDSGSAHSKHQ*GLARQG
Trigger: GCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTG...TGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR GCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGCGTGTCCCCACCTGCTaGCTCTGTCCCACACAGCCC +
Preference number: 2 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVRVPTC*LCPTQP
Trigger: GGGCTGTGTGGGACAGAGGCAGCAGGTGGGGACACG...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGCACTCAAAGCATCAATaGGGCCTGGCCAGGCAAGGC +
Preference number: 2 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQHSKHQ*GLARQG
Trigger: GCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTG...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTTCCTGCTTGTCCTCTaGCTGCTGAGCTCGCCCAGC +
Preference number: 2 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDFLLVL*LLSSPS
Trigger: GCTGGGCGAGCTCAGCAGCCAGAGGACAAGCAGGAA...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GGCGGTGAGGAAGGCTGTGGGGCTACACTGCCAGAGCTGGCAGGGCTCCTCCTGTTCTTGCCAAAGACCTaGTCTATGTCCCTTCTGATG +
Preference number: 2 (lower is better)
Translates to: GGEEGCGATLPELAGLLLFLPKT*SMSLLM
Trigger: CATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAA...CAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGCCTTCCTCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAACTGCAGAAGACAGGATaGCGGTGGCCATGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: AEDRMTVAMASWPCKALKLQKTG*RWPWLA
Trigger: AGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAG...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR GCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACCACAAACAGCACCCTTaGCATGGGAGGACTAGGGGC +
Preference number: 2 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDHKQHP*HGRTRG
Trigger: GCCCCTAGTCCTCCCATGGCAAGGGTGCTGTTTGTG...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp CTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTAGCCACAAACTCCTCATGGGGCACTTGGGTTTaGGGACACGGCTGTGGCCCT +
Preference number: 2 (lower is better)
Translates to: LRDVGNSNWDSLLATNSSWGTWV*GHGCGP
Trigger: AGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCA...TGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCCTGCAGAAGACAGGATaGCGGTGGCCATGGCTAGCT +
Preference number: 2 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSLQKTG*RWPWLA
Trigger: AGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAG...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR GCA 90 bp GCTAGGATGCACTTTGGGGCCTTCAGCAGGGGGATCCAGCAGCTGGCTTCTAGGGCTCTGAACTATGGCTaGTTCTTCCCTCTCCTTCAG +
Preference number: 2 (lower is better)
Translates to: ARMHFGAFSRGIQQLASRALNYG*FFPLLQ
Trigger: CTGAAGGAGAGGGAAGAAGCAGCCATAGTTCAGAGC...CCTAGAAGCCAGCTGCTGGATCCCCCTGCTGAAGGCCCCAAAGTGCATCCTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp CCGCCTGTCCTCAGCCAGAAAACCAACTTCACCTTTCCTATTGGACCTGACAAAGGGGGATCCAGCAGCTaGCTTCTAGGGCCTGGGCAC +
Preference number: 2 (lower is better)
Translates to: PPVLSQKTNFTFPIGPDKGGSSS*LLGPGH
Trigger: GTGCCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCC...TTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTGAGGACAGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp CTTAATCTCCAGCTCAGGGTGCTTGTTGGAGAGGCTCTGTCTGAGCAGATCCACCCTGCCACAGAGGGATaGGAAGTAAGCTGCCCGTGG +
Preference number: 2 (lower is better)
Translates to: LNLQLRVLVGEALSEQIHPATEG*EVSCPW
Trigger: CCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGG...GTGGATCTGCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCTGGAGATTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATCACAAACAGCACCCTTaGCATGGGAGGACTAGGGGC +
Preference number: 2 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDHKQHP*HGRTRG
Trigger: GCCCCTAGTCCTCCCATGGCAAGGGTGCTGTTTGTG...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR GCA 90 bp TTCCTGATGGAGGTGCTGGGGCACTTGGGTTTGGGGACACGGCTGTGGCCCTGGGCGTCTTTTTGTTCTTaGCAAAGACCTGGTCTATGT +
Preference number: 2 (lower is better)
Translates to: FLMEVLGHLGLGTRLWPWASFCS*QRPGLC
Trigger: ACATAGACCAGGTCTTTGGCAAGAACAAAAAGACGC...CCAGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTCCATCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp AGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGAGCATCAATGGGGCCTaGCCAGGCAAGGCAGTTACT +
Preference number: 2 (lower is better)
Translates to: RMTVAMASWPCKALKASMSINGA*PGKAVT
Trigger: AGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCT...CATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp GAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTAGCATCAATGGGGCCTaGCCAGGCAAGGCAGTTACT +
Preference number: 2 (lower is better)
Translates to: EGLLPTSHQAAEARPLQTSINGA*PGKAVT
Trigger: AGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCT...AGTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR CCA 90 bp AGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGTGGCCATGGCTAGCTaGCCATGCAAGGCACTCAAA +
Preference number: 2 (lower is better)
Translates to: RMTVAMASWPCKALKASMVAMAS*PCKALK
Trigger: TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCAC...CATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR GCA 90 bp CGAGCACGGGTAACAGCAACATTAATCCGCCTGTCCTCAGCCAGAAAACCAACTACCACACCAGCACCATaGTTCTCTGCCAGACGCTCC +
Preference number: 2 (lower is better)
Translates to: RARVTATLIRLSSARKPTTTPAP*FSARRS
Trigger: GGAGCGTCTGGCAGAGAAGCATGGTGCTGGTGTGGT...AGTTGGTTTTCTGGCTGAGGACAGGCGGATTAATGTTGCTGTTACCCGTGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp CTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTAGCCACAAACTCCTCACTTCAGGAGGTGTCCTaGCACAGAGGGATGGGAAGT +
Preference number: 2 (lower is better)
Translates to: LRDVGNSNWDSLLATNSSLQEVS*HRGMGS
Trigger: ACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAG...TGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp AACAGACTTAATCTCCAGCTCAGGGTGCTTGTTGGAGAGGCTCTGTCTGAGCAGGGATTTCCCTTGGACTaGCTGTCCTCCTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: NRLNLQLRVLVGEALSEQGFPLD*LSSSSS
Trigger: GCTGGAGGAGGAGGACAGCCAGTCCAAGGGAAATCC...CTGCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCTGGAGATTAAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCAGACCACACAATCCATaGCCACTGTGTCACTGCAGA +
Preference number: 2 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSRPHNP*PLCHCR
Trigger: TCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCT...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 90 bp CTGTCATGGGAACTCAGGGATGTGGGAAACTCCAACTGGGACTCCTaGCTAGCCACAAACTCCTCAATCGTAGCCCTAAAGTGCTCTGTC +
Preference number: 2 (lower is better)
Translates to: LSWELRDVGNSNWDS*LATNSSIVALKCSV
Trigger: GACAGAGCACTTTAGGGCTACGATTGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCCATGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp GATGTCATCCAGGTATTCAAAGGCTGTGCGTACCTCCCCATGCTCTGTGAAATAGCCGCAGTGAGGCTCTaGACTATGGCTGCTTCTTCC +
Preference number: 2 (lower is better)
Translates to: DVIQVFKGCAYLPMLCEIAAVRL*TMAASS
Trigger: GGAAGAAGCAGCCATAGTTCAGAGCCTCACTGCGGC...TATTTCACAGAGCATGGGGAGGTACGCACAGCCTTTGAATACCTGGATGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATAGACCACACAATCCATaGCCACTGTGTCACTGCAGA +
Preference number: 2 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDRPHNP*PLCHCR
Trigger: TCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCT...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR-3UTR GCA 90 bp GAGGTCCTTCAGGAGGTGTCCTGCCACAGAGGGATGGGAAGTAAGCTGCCCGTGTTCTCTCTCTTATCCTaGGTCTTTTTGTTCTTGCCA +
Preference number: 2 (lower is better)
Translates to: EVLQEVSCHRGMGSKLPVFSLLS*VFLFLP
Trigger: TGGCAAGAACAAAAAGACGCAGGATAAGAGAGAGAA...CACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp CTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTAGCCACAAACTCCTCAACGATGCACCTGTGTTaGTGGCTAGAACCACATCTG +
Preference number: 2 (lower is better)
Translates to: LRDVGNSNWDSLLATNSSTMHLC*WLEPHL
Trigger: CAGATGTGGTTCTAGCCACCAACACAGGTGCATCGT...TGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp CCGCCTGTCCTCAGCCAGAAAACCAACTTCACCTTTCCTATTGGACCTGACAAAACCAGAGCCTGGATGTaGAAAGTGACGAGGCGAACT +
Preference number: 2 (lower is better)
Translates to: PPVLSQKTNFTFPIGPDKTRAWM*KVTRRT
Trigger: AGTTCGCCTCGTCACTTTGCACATCCAGGCTCTGGT...TTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTGAGGACAGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CCA 90 bp CAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAACCCATTGGAGAGAAGGCGGGCAGAGTaGTCACTAGCCTCCAGTGCA +
Preference number: 2 (lower is better)
Translates to: QSVDTSVLLRRGNTNPLERRRAE*SLASSA
Trigger: TGCACTGGAGGCTAGTGACCACTCTGCCCGCCTTCT...CTCCAATGGGTTTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 90 bp ATTGGACCTGACAAAGGTCAGGAGCACAGCCTCTTTCTCTCGGCCTaGAAAGCCATCAACAGACTTAATCTCCAGCTCAGGGTGCTTGTT +
Preference number: 2 (lower is better)
Translates to: IGPDKGQEHSLFLSA*KAINRLNLQLRVLV
Trigger: AACAAGCACCCTGAGCTGGAGATTAAGTCTGTTGATGGCTTTCAAGGCCGAGAGAAAGAGGCTGTGCTCCTGACCTTTGTCAGGTCCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR TCA 90 bp CCGCCTGTCCTCAGCCAGAAAACCAACTTCACCTTTCCTATTGGACCTGACAAAGGTCTATGTCCCTTCTaGTGTCAGCAACAATCTGGG +
Preference number: 2 (lower is better)
Translates to: PPVLSQKTNFTFPIGPDKGLCPF*CQQQSG
Trigger: CCCAGATTGTTGCTGACATCAGAAGGGACATAGACC...TTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTGAGGACAGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR GCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCAATAAGATATACAGCTaGAGGCACAACTGGATCAGC +
Preference number: 2 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSNKIYS*RHNWIS
Trigger: GCTGATCCAGTTGTGCCTGCAGCTGTATATCTTATT...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR CCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCTCAGCAAAGAATCTTTaGCAGCAAGTGACAGAAACC +
Preference number: 2 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSSAKNL*QQVTET
Trigger: GGTTTCTGTCACTTGCTGCCAAAGATTCTTTGCTGA...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR GCA 90 bp CAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAACCCATTGGAGTGCCCACTGTGTCACTaGAGAAGACAGGATGACGGT +
Preference number: 2 (lower is better)
Translates to: QSVDTSVLLRRGNTNPLECPLCH*RRQDDG
Trigger: ACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCA...CTCCAATGGGTTTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 90 bp CAGGATAATATCACCAGGTCAACCTGCAGCCTTATTTGTTTCTCTTaGGCTTCCTTTTCTTCTACAGAGGGGTTTCTAGAAGGCGGGCAG +
Preference number: 2 (lower is better)
Translates to: QDNITRSTCSLICFS*ASFSSTEGFLEGGQ
Trigger: CTGCCCGCCTTCTAGAAACCCCTCTGTAGAAGAAAAGGAAGCCAAAGAGAAACAAATAAGGCTGCAGGTTGACCTGGTGATATTATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR GCA 90 bp GCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTTCAGCACAATCTCCATaGCAGGACGCAGACCCTGTG +
Preference number: 2 (lower is better)
Translates to: AIRHIFLMRVLWDGKHKLSAQSP*QDADPV
Trigger: CACAGGGTCTGCGTCCTGGCATGGAGATTGTGCTGA...AAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR GCA 90 bp AGACATTTTTCAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGGCCAGAAGGAAAGAATaGTCACCTCCAACACAAGCA +
Preference number: 2 (lower is better)
Translates to: RHFSSNQTHFPNESSLGWARRKE*SPPTQA
Trigger: TGCTTGTGTTGGAGGTGAGCATTCTTTCCTTCTGGC...CCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTGAAAAATGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CAGACGCTCCATCAGGCTGCGGGACAGCCCAGCCAGTaGCGCCCTGTGAGAGACGGTGGTGGGTGGCAGCTG +
Preference number: 3 (lower is better)
Translates to: QTLHQAAGQPSQ*RPVRDGGGWQL
Trigger: CAGCTGCCACCCACCACCGTCTCTCACAGGGCGGCACTGGCTGGGCTGTCCCGCAGCCTGATGGAGCGTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp AGGGCAATGTGCCTGCACGACGGTGACGGGCTCCTCTaGCCGAGGCTCAGGCTCAGCCTGTGCAGGGCTGGG +
Preference number: 3 (lower is better)
Translates to: RAMCLHDGDGLL*PRLRLSLCRAG
Trigger: CCCAGCCCTGCACAGGCTGAGCCTGAGCCTCGGGCAGAGGAGCCCGTCACCGTCGTGCAGGCACATTGCCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp CTGGGACTGGACGTGAGAGCCCGGGGGCTTCTCGCTTaGCTTCCTGCGGCCATGTCTAGGGGCTGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: LGLDVRARGLLA*LPAAMSRGCSG
Trigger: ACCAGAGCAGCCCCTAGACATGGCCGCAGGAAGCCAAGCGAGAAGCCCCCGGGCTCTCACGTCCAGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp CCTTCTGTGGCCTCGAGTCCCCACCTGGCTGACCCTTaGCTGTCTGAGCCTGGGAGCTTTGCTGCCGCTGCA +
Preference number: 3 (lower is better)
Translates to: PSVASSPHLADP*LSEPGSFAAAA
Trigger: TGCAGCGGCAGCAAAGCTCCCAGGCTCAGACAGCCAAGGGTCAGCCAGGTGGGGACTCGAGGCCACAGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp CAGCGGGACACGTGTCTCCTCTGTGTCAGTCACGCCTaGGAGGTCCTTCAGGAGGTGTCCTGCCACAGAGGG +
Preference number: 3 (lower is better)
Translates to: QRDTCLLCVSHA*EVLQEVSCHRG
Trigger: CCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCCAGGCGTGACTGACACAGAGGAGACACGTGTCCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CAA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGTGCAGCTGGGCCCTCTaGGCCGGGTCCAGGGCCCTG +
Preference number: 3 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLCSWAL*AGSRAL
Trigger: CAGGGCCCTGGACCCGGCCAAGAGGGCCCAGCTGCA...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR-3UTR CAA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTTCCAGGGCCCTGTCCTaGGTCCCACTGCCTGCATAC +
Preference number: 3 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAISRALS*VPLPAY
Trigger: GTATGCAGGCAGTGGGACCAAGGACAGGGCCCTGGA...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000119292.8
3UTR TCA 72 bp GCTGCCCGTGGTACATGGCCTCCGAGGCCCAGCACATaGTGGCCTGGTGCATTCGGTACTGTACCGTCAGCA +
Preference number: 3 (lower is better)
Translates to: AARGTWPPRPST*WPGAFGTVPSA
Trigger: TGCTGACGGTACAGTACCGAATGCACCAGGCCATCATGTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp AGGAGGTGTCCTGCCACAGAGGGATGGGAAGTAAGCTaGCCGTGGTACATGGCCTCCGAGGCCCAGCACATG +
Preference number: 3 (lower is better)
Translates to: RRCPATEGWEVS*PWYMASEAQHM
Trigger: CATGTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp CTTCTCGCTTGGCTTCCTGCGGCCATGTCTAGGGGCTaGTCTGGTCTCCTGGCCACTCTCCTGATCACTGGC +
Preference number: 3 (lower is better)
Translates to: LLAWLPAAMSRG*SGLLATLLITG
Trigger: GCCAGTGATCAGGAGAGTGGCCAGGAGACCAGAGCAGCCCCTAGACATGGCCGCAGGAAGCCAAGCGAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp GGGACCACACCATGGAAGGAGAGGCCTGATGGCTGCTaGCGGCTTGACTCCCACACACATGCTGACCTCTCC +
Preference number: 3 (lower is better)
Translates to: GTTPWKERPDGC*RLDSHTHADLS
Trigger: GGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp TGTCCTGCCACAGAGGGATGGGAAGTAAGCTGCCCGTaGTACATGGCCTCCGAGGCCCAGCACATGATGGCC +
Preference number: 3 (lower is better)
Translates to: CPATEGWEVSCP*YMASEAQHMMA
Trigger: GGCCATCATGTGCTGGGCCTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp GGGAGGTCCTTCAGGAGGTGTCCTGCCACAGAGGGATaGGAAGTAAGCTGCCCGTGGTACATGGCCTCCGAG +
Preference number: 3 (lower is better)
Translates to: GRSFRRCPATEG*EVSCPWYMASE
Trigger: CTCGGAGGCCATGTACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 72 bp ACAGGGCTTGTGGGACCCAAAGGCACACTACAGGCGTaGAGACCCGTGTGCAGGGGCCCAAACCACACATGC +
Preference number: 3 (lower is better)
Translates to: TGLVGPKGTLQA*RPVCRGPNHTC
Trigger: GCATGTGTGGTTTGGGCCCCTGCACACGGGTCTTCACGCCTGTAGTGTGCCTTTGGGTCCCACAAGCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp GTCAGTCACGCCTGGGAGGTCCTTCAGGAGGTGTCCTaGCACAGAGGGATGGGAAGTAAGCTGCCCGTGGTA +
Preference number: 3 (lower is better)
Translates to: VSHAWEVLQEVS*HRGMGSKLPVV
Trigger: TACCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAGGACCTCCCAGGCGTGACTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp TGTCCGGTCTGGGCCTCCAGTTCTGTCAGAGCCATTTaGACTGGAGCTGTGCTGGGACTGGACGTGAGAGCC +
Preference number: 3 (lower is better)
Translates to: CPVWASSSVRAI*TGAVLGLDVRA
Trigger: GGCTCTCACGTCCAGTCCCAGCACAGCTCCAGTGCAAATGGCTCTGACAGAACTGGAGGCCCAGACCGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp AGCCTGAAGACCCGAGTGATTCCTGGGACCACACCATaGAAGGAGAGGCCTGATGGCTGCTGGCGGCTTGAC +
Preference number: 3 (lower is better)
Translates to: SLKTRVIPGTTP*KERPDGCWRLD
Trigger: GTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCCCAGGAATCACTCGGGTCTTCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CTGAAGGTTGTAGGGTGCGATGACGGCAATGTCACCTaGCTGGACCCCAGCATCCACCAGAGCCTGGATGTG +
Preference number: 3 (lower is better)
Translates to: LKVVGCDDGNVT*LDPSIHQSLDV
Trigger: CACATCCAGGCTCTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGCCGTCATCGCACCCTACAACCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp GCTCTGTCTGAGCAGATCCACCTGAAGGTTGTAGGGTaGGATGACGGCAATGTCACCTGCCTGGACCCCAGC +
Preference number: 3 (lower is better)
Translates to: ALSEQIHLKVVG*DDGNVTCLDPS
Trigger: GCTGGGGTCCAGGCAGGTGACATTGCCGTCATCGCACCCTACAACCTTCAGGTGGATCTGCTCAGACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp GGAGCTTTGCTGCCGCTGCAGCCTCTCCAGATGCAGTaGCTTCAGATCCAGCTGTACAGGGCAATGTGCCTG +
Preference number: 3 (lower is better)
Translates to: GALLPLQPLQMQ*LQIQLYRAMCL
Trigger: CAGGCACATTGCCCTGTACAGCTGGATCTGAAGGCACTGCATCTGGAGAGGCTGCAGCGGCAGCAAAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp GGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTaGAAGGACTACTTCCCACCAGTCACCAAGCAGCAG +
Preference number: 3 (lower is better)
Translates to: GAVSEGEQCMGP*KDYFPPVTKQQ
Trigger: CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CCA 72 bp GTGCTGTCGTGCCTCAGCCCGAACTCCTCAGCTAACTaGTGGACTCGCAGCCTGTCATGGGAACTCAGGGAT +
Preference number: 3 (lower is better)
Translates to: VLSCLSPNSSAN*WTRSLSWELRD
Trigger: ATCCCTGAGTTCCCATGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTTCGGGCTGAGGCACGACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 72 bp CAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATaGCGGTGGCCATGGCTAGCTGGCCATGCAAGGCAC +
Preference number: 3 (lower is better)
Translates to: QSMPTVSLQKTG*RWPWLAGHARH
Trigger: GTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR TCA 72 bp TCCTCAAGTGCCCACATCTGCTCCCATGCCTGTCCATaGTGCCAGGCTGTCATCACGATTGGATGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: SSSAHICSHACP*CQAVITIGCPG
Trigger: CCCAGGGCATCCAATCGTGATGACAGCCTGGCATCATGGACAGGCATGGGAGCAGATGTGGGCACTTGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp TACATGGCCTCCGAGGCCCAGCACATGATGGCCTGGTaGATTCGGTACTGTACCGTCAGCATCCTCACCACA +
Preference number: 3 (lower is better)
Translates to: YMASEAQHMMAW*IRYCTVSILTT
Trigger: TGTGGTGAGGATGCTGACGGTACAGTACCGAATGCACCAGGCCATCATGTGCTGGGCCTCGGAGGCCATGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp CCATGCCTGTCCATGATGCCAGGCTGTCATCACGATTaGATGCCCTGGGGAGGTGCTACCACTACCCAGTCA +
Preference number: 3 (lower is better)
Translates to: PCLSMMPGCHHD*MPWGGATTTQS
Trigger: TGACTGGGTAGTGGTAGCACCTCCCCAGGGCATCCAATCGTGATGACAGCCTGGCATCATGGACAGGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR CAA 90 bp TGCACTTTGGGGCCTTCAGCAGGGGGATCCAGCAGCTGGCTTCTAGGGCCTGGGTGCGTCTTTTTGTTCTaGCCAAAGACCTGGTCTATG +
Preference number: 3 (lower is better)
Translates to: CTLGPSAGGSSSWLLGPGCVFLF*PKTWSM
Trigger: CATAGACCAGGTCTTTGGCAAGAACAAAAAGACGCA...CCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCCTGCTGAAGGCCCCAAAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR-3UTR CAA 90 bp TGCACTTTGGGGCCTTCAGCAGGGGGATCCAGCAGCTGGCTTCTAGGGCCTGGGTTATCCTGCGTCTTTTaGTTCTTGCCAAAGACCTGG +
Preference number: 3 (lower is better)
Translates to: CTLGPSAGGSSSWLLGPGLSCVF*FLPKTW
Trigger: CCAGGTCTTTGGCAAGAACAAAAAGACGCAGGATAA...CCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCCTGCTGAAGGCCCCAAAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp TGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATaGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGT +
Preference number: 3 (lower is better)
Translates to: WLAGHARHSKHQ*GLARQGSYSDG
Trigger: ACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CCA 72 bp ACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTaGCCATGCAAGGCACTCAAAGCATCAATGGGGCCT +
Preference number: 3 (lower is better)
Translates to: TAEDRMTVAMAS*PCKALKASMGP
Trigger: AGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CCA 72 bp GCAAGGTCAATCTTCCACTGTGCTTTGGACCACACATaGGAGCTGCTCCCAGTGGCAATCCGAGACCTCGTC +
Preference number: 3 (lower is better)
Translates to: ARSIFHCALDHT*ELLPVAIRDLV
Trigger: GACGAGGTCTCGGATTGCCACTGGGAGCAGCTCCCATGTGTGGTCCAAAGCACAGTGGAAGATTGACCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CCAGTGTCTTTCCTCAAGTGCCCACATCTGCTCCCATaGCTGTCCATGATGCCAGGCTGTCATCACGATTGG +
Preference number: 3 (lower is better)
Translates to: PVSFLKCPHLLP*LSMMPGCHHDW
Trigger: CCAATCGTGATGACAGCCTGGCATCATGGACAGGCATGGGAGCAGATGTGGGCACTTGAGGAAAGACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CCTCCAGTGCAACAAGAGCCAGTGTCTTTCCTCAAGTaGCCACATCTGCTCCCATGCCTGTCCATGATGCCA +
Preference number: 3 (lower is better)
Translates to: PPVQQEPVSFLK*PHLLPCLSMMP
Trigger: TGGCATCATGGACAGGCATGGGAGCAGATGTGGGCACTTGAGGAAAGACACTGGCTCTTGTTGCACTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp GCTGGGCTGGGGAAACAGCTGAGTAGGCAAACCACTTaGCATTCAAACAGGAGAACCCGAGTTCAGATCCCC +
Preference number: 3 (lower is better)
Translates to: AGLGKQLSRQTT*HSNRRTRVQIP
Trigger: GGGGATCTGAACTCGGGTTCTCCTGTTTGAATGGCAAGTGGTTTGCCTACTCAGCTGTTTCCCCAGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CTCACTTCCAGGAATGGCAAGGTCAATCTTCCACTGTaGTTTGGACCACACATGGGAGCTGCTCCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: LTSRNGKVNLPL*FGPHMGAAPSG
Trigger: GCCACTGGGAGCAGCTCCCATGTGTGGTCCAAAGCACAGTGGAAGATTGACCTTGCCATTCCTGGAAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp CTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTaGCCAGGCAAGGCAGTTACTCTGATGGTAACTAGG +
Preference number: 3 (lower is better)
Translates to: LAMQGTQSINGA*PGKAVTLMVTR
Trigger: CCTAGTTACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CCA 72 bp TCCATGATGCCAGGCTGTCATCACGATTGGATGCCCTaGGGAGGTGCTACCACTACCCAGTCACAGCATGTA +
Preference number: 3 (lower is better)
Translates to: SMMPGCHHDWMP*GGATTTQSQHV
Trigger: TACATGCTGTGACTGGGTAGTGGTAGCACCTCCCCAGGGCATCCAATCGTGATGACAGCCTGGCATCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp AACTCCTCAGCTAACTGGTGGACTCGCAGCCTGTCATaGGAACTCAGGGATGTGGGAAACTCCAACTGGGAC +
Preference number: 3 (lower is better)
Translates to: NSSANWWTRSLS*ELRDVGNSNWD
Trigger: GTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 72 bp AGGTGCTACCACTACCCAGTCACAGCATGTACAGGGTaGCATCTGGGCCAGAAGGAAAGAATGCTCACCTCC +
Preference number: 3 (lower is better)
Translates to: RCYHYPVTACTG*HLGQKERMLTS
Trigger: GGAGGTGAGCATTCTTTCCTTCTGGCCCAGATGTCACCCTGTACATGCTGTGACTGGGTAGTGGTAGCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp TTGGTGGCTAGAACCACATCTGCCGCAGTGAGGCTCTaGACTATGGCTGCTTCTTCCCTCTCCTTCAGTTCC +
Preference number: 3 (lower is better)
Translates to: LVARTTSAAVRL*TMAASSLSFSS
Trigger: GGAACTGAAGGAGAGGGAAGAAGCAGCCATAGTTCAGAGCCTCACTGCGGCAGATGTGGTTCTAGCCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp TACAGCCATTCCCGCATCCCTAGACCACACAATCCATaGCCACTGTGTCACTGCAGAAGACAGGATGACGGT +
Preference number: 3 (lower is better)
Translates to: YSHSRIPRPHNP*PLCHCRRQDDG
Trigger: ACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCGGGAATGGCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR GCA 72 bp TTGTTGACAGTGTGGGAATCACAGATGACTGCCACGTaGCGCCGAGCACGGGTAACAGCAACATTAATCCGC +
Preference number: 3 (lower is better)
Translates to: LLTVWESQMTAT*RRARVTATLIR
Trigger: GCGGATTAATGTTGCTGTTACCCGTGCTCGGCGGCACGTGGCAGTCATCTGTGATTCCCACACTGTCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR GCA 72 bp AGCATGGTTGTTGACAGTGTGGGAATCACAGATGACTaGCACGTGCCGCCGAGCACGGGTAACAGCAACATT +
Preference number: 3 (lower is better)
Translates to: SMVVDSVGITDD*HVPPSTGNSNI
Trigger: AATGTTGCTGTTACCCGTGCTCGGCGGCACGTGGCAGTCATCTGTGATTCCCACACTGTCAACAACCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp TTCTTCTACAGAGGGGTTTCTAGAAGGCGGGCAGAGTaGTCACTAGCCTCCAGTGCAACAAGAGCCAGTGTC +
Preference number: 3 (lower is better)
Translates to: FFYRGVSRRRAE*SLASSATRASV
Trigger: GACACTGGCTCTTGTTGCACTGGAGGCTAGTGACCACTCTGCCCGCCTTCTAGAAACCCCTCTGTAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp GAGCCTGAGGCTAAATTGCATCTGTCAAAGTTCCCATaGGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: EPEAKLHLSKFP*ATGTECWRGCS
Trigger: ACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGACAGATGCAATTTAGCCTCAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR TCA 72 bp TCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTTaGGCATGGTATCTGAGGAAGGCACACTATAGAGCA +
Preference number: 3 (lower is better)
Translates to: SMGGEALGPVKA*AWYLRKAHYRA
Trigger: TGCTCTATAGTGTGCCTTCCTCAGATACCATGCTCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp TGGAGGAGACACAGAGACAAAATGTGGAGTAGAGACTaGAGGAAAGGCCATCCAGAGACCTGGGCATCCATC +
Preference number: 3 (lower is better)
Translates to: WRRHRDKMWSRD*RKGHPETWASI
Trigger: GATGGATGCCCAGGTCTCTGGATGGCCTTTCCTTCAGTCTCTACTCCACATTTTGTCTCTGTGTCTCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp CAGCCAGAAAACCAACTTCACCTTTCCTATTGGACCTaGCAAAGGTCAGGAGCACAGCCTCTTTCTCTCGGC +
Preference number: 3 (lower is better)
Translates to: QPENQLHLSYWT*QRSGAQPLSLG
Trigger: GCCGAGAGAAAGAGGCTGTGCTCCTGACCTTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR CCA 72 bp ACCACTACCCAGTCACAGCATGTACAGGGTGACATCTaGGCCAGAAGGAAAGAATGCTCACCTCCAACACAA +
Preference number: 3 (lower is better)
Translates to: TTTQSQHVQGDI*ARRKECSPPTQ
Trigger: TTGTGTTGGAGGTGAGCATTCTTTCCTTCTGGCCCAGATGTCACCCTGTACATGCTGTGACTGGGTAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp ATGACCTTGTTGGACATCAATGGGAGGAGAGGCCCTTaGTCCTGTGAAGGCTTGAGCATGGTATCTGAGGAA +
Preference number: 3 (lower is better)
Translates to: MTLLDINGRRGP*SCEGLSMVSEE
Trigger: TTCCTCAGATACCATGCTCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGTCCAACAAGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp CTGTCATGGGAACTCAGGGATGTGGGAAACTCCAACTaGGACTCCTTGCTAGCCACAAACTCCTCAATCGTA +
Preference number: 3 (lower is better)
Translates to: LSWELRDVGNSN*DSLLATNSSIV
Trigger: TACGATTGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCCATGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
3UTR TCA 72 bp CCCCAATGGAGGAGTTTGAGAGGGGACCAAAGAAGCTaGAGTGGTTTGCAACCCTATAGGAGGAACAACAGT +
Preference number: 3 (lower is better)
Translates to: PQWRSLRGDQRS*SGLQPYRRNNS
Trigger: ACTGTTGTTCCTCCTATAGGGTTGCAAACCACTTCAGCTTCTTTGGTCCCCTCTCAAACTCCTCCATTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp AGAGCATGGTATCTGAGGGAGGCACACTGTAGAGCATaGTGTCTGAGGGAGGCCATAAGACATTTTTCAAGC +
Preference number: 3 (lower is better)
Translates to: RAWYLREAHCRA*CLREAIRHFSS
Trigger: GCTTGAAAAATGTCTTATGGCCTCCCTCAGACAGCATGCTCTACAGTGTGCCTCCCTCAGATACCATGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR-3UTR CAA 90 bp CAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAACCCATTGGAGATCTTCCACTGTGCTTaGGACCACACATGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: QSVDTSVLLRRGNTNPLEIFHCA*DHTWEL
Trigger: CAGCTCCCATGTGTGGTCCAAAGCACAGTGGAAGAT...CTCCAATGGGTTTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp ACCCAATCACAAAGAACACACACCGTATGCGCTCTCTaGTCAGTAGATATTGGCCCTGAAGTCACACCACAC +
Preference number: 3 (lower is better)
Translates to: TQSQRTHTVCAL*SVDIGPEVTPH
Trigger: GTGTGGTGTGACTTCAGGGCCAATATCTACTGATCAGAGAGCGCATACGGTGTGTGTTCTTTGTGATTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp CATGTACAGGGTGACATCTGGGCCAGAAGGAAAGAATaGTCACCTCCAACACAAGCAAATATCCACTGTGTG +
Preference number: 3 (lower is better)
Translates to: HVQGDIWARRKE*SPPTQANIHCV
Trigger: CACACAGTGGATATTTGCTTGTGTTGGAGGTGAGCATTCTTTCCTTCTGGCCCAGATGTCACCCTGTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp AATGCTGGAAAGGATGAGTTGGAGATGAAGCGTGGCTaGATCCAGAGACTCCAGGATAATATCACCAGGTCA +
Preference number: 3 (lower is better)
Translates to: NAGKDELEMKRG*IQRLQDNITRS
Trigger: TGACCTGGTGATATTATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTCATCCTTTCCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp ATTGTGGATGCCAACAAGTACTTGATGATGGGAGTCTaGTATAACAGTCTCCTGAAAGGTTCTATCGGTGCC +
Preference number: 3 (lower is better)
Translates to: IVDANKYLMMGV*YNSLLKGSIGA
Trigger: GGCACCGATAGAACCTTTCAGGAGACTGTTATATCAGACTCCCATCATCAAGTACTTGTTGGCATCCACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR TCA 72 bp AGGCAAACAGATGGAACTAGAAAATATCATGCTGAGTaGGGTAACCCAATCACAAAGAACACACACCGTATG +
Preference number: 3 (lower is better)
Translates to: RQTDGTRKYHAE*GNPITKNTHRM
Trigger: CATACGGTGTGTGTTCTTTGTGATTGGGTTACCTCACTCAGCATGATATTTTCTAGTTCCATCTGTTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp ACATGCTTTAATAAGATATACAGCTGCAGGCACAACTaGATCAGCAAAGAATCTTTGGCAGCAAGTGACAGA +
Preference number: 3 (lower is better)
Translates to: TCFNKIYSCRHN*ISKESLAASDR
Trigger: TCTGTCACTTGCTGCCAAAGATTCTTTGCTGATCCAGTTGTGCCTGCAGCTGTATATCTTATTAAAGCATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CCA 72 bp CAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTaGGATGGGAAACACAAACTTGGAATCCAGCATTTT +
Preference number: 3 (lower is better)
Translates to: QAIRHIFLMRVL*DGKHKLGIQHF
Trigger: AAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR GCA 72 bp TTTATATTATTTTGGAACAAGAGCCTGAGGCTAAATTaGATCTGTCAAAGTTCCCATGAGCAACAGGTACAG +
Preference number: 3 (lower is better)
Translates to: FILFWNKSLRLN*ICQSSHEQQVQ
Trigger: CTGTACCTGTTGCTCATGGGAACTTTGACAGATGCAATTTAGCCTCAGGCTCTTGTTCCAAAATAATATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAAGGAGGCGGGCGGGGTaGCCCAGGCGCAGAATCCGC +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKRRRAG*PRRRIR
Trigger: GCGGATTCTGCGCCTGGGTCACCCCGCCCGCCTCCT...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GCACACTACAGGCGTGAAGACCCGTGTGCAGGGGCCCAAACCACACATGCTCACTGCTGGGACTGGACGTaGGAGCCCGGGGGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AHYRREDPCAGAQTTHAHCWDWT*EPGGFS
Trigger: CGAGAAGCCCCCGGGCTCTCACGTCCAGTCCCAGCA...GTGAGCATGTGTGGTTTGGGCCCCTGCACACGGGTCTTCACGCCTGTAGTGTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTGCTGGGACTGGACGTaGGAGCCCGGGGGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSCWDWT*EPGGFS
Trigger: CGAGAAGCCCCCGGGCTCTCACGTCCAGTCCCAGCA...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGCCGAGGCCCAGCACATaGTGGCCTGGTGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKPRPST*WPGAFG
Trigger: ACCGAATGCACCAGGCCATCATGTGCTGGGCCTCGG...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACCTTCCCCTCCCCGGTaGTGTCGTGCCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: VTAEDRMTVAMASWPCKAPSPPR*CRASAR
Trigger: TCGGGCTGAGGCACGACAGCACCGGGGAGGGGAAGG...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTGCTGTGGGGCTACACTaGCAGAGCTGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAIAVGLH*QSWQGS
Trigger: GGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGC...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCGGGACAGCCCAGCCAGTGCCGCCCTGTGAGAGACGGTGGTGGGTGGCAGCTGCTGTCCAGGTTCAGCTaGAGATCATGGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: AGQPSQCRPVRDGGGWQLLSRFS*RSWDSS
Trigger: TGATGAGTCCCATGATCTCCAGCTGAACCTGGACAG...CAGCTGCCACCCACCACCGTCTCTCACAGGGCGGCACTGGCTGGGCTGTCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp TCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCACAATCTCCGGGGGATCCAGCAGCTaGCTTCTAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: SETSSLPSGQGLWFSTISGGSSS*LLGPGH
Trigger: GTGCCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCC...GGAGATTGTGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGTTGGGGACACGGCTGTaGCCCTGGGAACCCTCATGG +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKLGTRL*PWEPSW
Trigger: CCATGAGGGTTCCCAGGGCCACAGCCGTGTCCCCAA...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTCAGCCTGTGCAGGGCTaGGCGGTGAGGAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSQPVQG*AVRKAV
Trigger: CACAGCCTTCCTCACCGCCCAGCCCTGCACAGGCTG...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GGCCTGATGGCTGCTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTCAGGCAGATGGTGGCTaGGGCAGTAGCGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: GLMAAGGLTPTHMLTSPSQADGG*GSSGGY
Trigger: GTAGCCACCGCTACTGCCTCAGCCACCATCTGCCTG...ACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGCTGGCTTCTAGGGCCTaGGCACATTCGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKLASRA*AHSSTT
Trigger: GGTGGTGGACGAATGTGCCCAGGCCCTAGAAGCCAG...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCGGTGGCAGCTGTCTGTaGTCCCCAGCTAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPGGSCL*SPARMH
Trigger: GTGCATCCTAGCTGGGGACCACAGACAGCTGCCACC...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTAGAGACGGTGGTGGGTaGCAGCTGTCTGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSRDGGG*QLSVVP
Trigger: GGGGACCACAGACAGCTGCCACCCACCACCGTCTCT...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGCCCTGTGAGAGACGGTaGTGGGTGGCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKPCERR*WVAAVC
Trigger: ACAGACAGCTGCCACCCACCACCGTCTCTCACAGGG...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTTGGGGACACGGCTGTaGCCCTGGGAACCCTCATGG +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSLGTRL*PWEPSW
Trigger: CCATGAGGGTTCCCAGGGCCACAGCCGTGTCCCCAA...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTCACCTGGCTGACCCTTaGCTGTCTGAGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSHLADP*LSEPGS
Trigger: GCTCCCAGGCTCAGACAGCCAAGGGTCAGCCAGGTG...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCATCCCGGCTAATCCTCTaGCGGGCATGGGCACGAGCC +
Preference number: 4 (lower is better)
Translates to: VTAEDRMTVAMASWPCKASRLIL*RAWARA
Trigger: GGCTCGTGCCCATGCCCGCCAGAGGATTAGCCGGGA...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAAGCCTCCTCTGCAGCTaGGCCCTCTTGGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKSLLCS*ALLAGS
Trigger: GGACCCGGCCAAGAGGGCCCAGCTGCAGAGGAGGCT...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp AACAGACTTAATCTCCAGCTCAGGGTGCTTGTTGGAGAGGCTCTGTCTGAGCAGAGGAGGCGGGCGGGGTaGCCCAGGCGCAGAATCCGC +
Preference number: 4 (lower is better)
Translates to: NRLNLQLRVLVGEALSEQRRRAG*PRRRIR
Trigger: GCGGATTCTGCGCCTGGGTCACCCCGCCCGCCTCCT...CTGCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCTGGAGATTAAGTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCTGGATGTGCAAAGTaGCGAGGCGAACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARPGCAK*RGELRP
Trigger: CGGGCGAAGTTCGCCTCGTCACTTTGCACATCCAGG...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GGCCTGATGGCTGCTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTTCCTCCTGCTCACTGTaGTGTGCCGAGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GLMAAGGLTPTHMLTSPSSSCSL*CAEPSP
Trigger: AGGGGAAGGCTCGGCACATCACAGTGAGCAGGAGGA...ACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGTTCCTGCCAGGACCTaGGCTCCTCCACCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKVPART*APPPRR
Trigger: ACGCCGAGGTGGAGGAGCGCAGGTCCTGGCAGGAAC...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCAGAGAACTGTGTTCCTaGCAGGACCTGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPRELCS*QDLRSS
Trigger: GGAGGAGCGCAGGTCCTGGCAGGAACACAGTTCTCT...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCCCTTCCCCTCCCCGGTaGTGTCGTGCCTCAGCCCGA +
Preference number: 4 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSPSPPR*CRASAR
Trigger: TCGGGCTGAGGCACGACAGCACCGGGGAGGGGAAGG...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp ATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCACTGCTCACTGTGATGTaGCGAGCCTTCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: MASWPCKALKASMGPGQALLTVM*RAFPSP
Trigger: CGGGGAGGGGAAGGCTCGGCACATCACAGTGAGCAG...TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACCTGCTCACTGTGATGTaGCGAGCCTTCCCCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYLLTVM*RAFPSP
Trigger: CGGGGAGGGGAAGGCTCGGCACATCACAGTGAGCAG...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCGAGCTTTGCTGCCGCTaGAGCCTCTCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPELCCR*SLSRCS
Trigger: ACTGCATCTGGAGAGGCTGCAGCGGCAGCAAAGCTC...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCGCCCTGTGCGCTGGCTaGATACCTGAAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPALCAG*IPEASA
Trigger: TGCTGAAGCTTCAGGTATCCAGCCAGCGCACAGGGC...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp AGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCAGGTGGCAGCTGTCTGTaGTCCCCAGCTAGGATGCAC +
Preference number: 4 (lower is better)
Translates to: SGNPRPRLSPVARDSGSAGGSCL*SPARMH
Trigger: GTGCATCCTAGCTGGGGACCACAGACAGCTGCCACC...TGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGTGAGAGACGGTGGTaGGTGGCAGCTGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPCERRW*VAAVCG
Trigger: ACCACAGACAGCTGCCACCCACCACCGTCTCTCACA...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGTGTCAGTCACGCCTaGGAGGTCCTTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPCVSHA*EVLQEV
Trigger: CACCTCCTGAAGGACCTCCCAGGCGTGACTGACACA...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTAGGTGCTGGGGCACTTaGGTTTGGGGACACGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAIRCWGT*VWGHGC
Trigger: ACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCT...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTCTACACTGCCAGAGCTaGCAGGGCTCCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAILHCQS*QGSSCS
Trigger: TGAGCAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAG...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCTCGAGTCCCCACCTaGCTGACCCTTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: QCMGPWKDYFPPVTKQQRPRVPT*LTLGCL
Trigger: CAGACAGCCAAGGGTCAGCCAGGTGGGGACTCGAGG...CCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CAA 72 bp CTGTCCGGTCTGGGCCTCCAGTTCTGTCAGAGCCATTaGCACTGGAGCTGTGCTGGGACTGGACGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: LSGLGLQFCQSH*HWSCAGTGRES
Trigger: GCTCTCACGTCCAGTCCCAGCACAGCTCCAGTGCAAATGGCTCTGACAGAACTGGAGGCCCAGACCGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp AGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCACACACCCCTCGGCTCTaGAGCTCTCTCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: SGNPRPRLSPVARDSGSAHTPRL*SSLREL
Trigger: CAGTTCTCTGAGAGAGCTTCAGAGCCGAGGGGTGTG...TGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp AGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCATTGTCCTCTGGCTGCTaGGCTCGCCCAGCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SGNPRPRLSPVARDSGSALSSGC*ARPASC
Trigger: ACAAGAAGCTGGGCGAGCTCAGCAGCCAGAGGACAA...TGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp AGTGGCAATCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCAAGAGAACTGTGTTCCTaGCAGGACCTGCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SGNPRPRLSPVARDSGSARELCS*QDLRSS
Trigger: GGAGGAGCGCAGGTCCTGGCAGGAACACAGTTCTCT...TGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGATTGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGGCCATGTCTAGGGGCTaGTCTGGTCTCCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQAMSRG*SGLLAT
Trigger: AGTGGCCAGGAGACCAGAGCAGCCCCTAGACATGGC...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGCCTGGGAGCTTTGCTaGCGCTGCAGCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITAWELC*RCSLSR
Trigger: TCTGGAGAGGCTGCAGCGGCAGCAAAGCTCCCAGGC...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGGGTGGCTACAGTGCATaGAGAACTGGCCCAGAGTGG +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARGGYSA*RTGPEW
Trigger: CCACTCTGGGCCAGTTCTGCATGCACTGTAGCCACC...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTGGGGGATCCAGCAGCTaGCTTCTAGGGCCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: EGLLPTSHQAAEARPLQTGGSSS*LLGPGH
Trigger: GTGCCCAGGCCCTAGAAGCCAGCTGCTGGATCCCCC...AGTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGCCTGCCACAGAGGGATaGGAAGTAAGCTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQPATEG*EVSCPW
Trigger: CCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGG...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAATGGGGCACTTGGGTTTaGGGACACGGCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKWGTWV*GHGCGP
Trigger: AGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCA...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCCTGATGGCTGCTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTGTGCTCTGTCCGGTCTaGGCCTCCAGTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLMAAGGLTPTHMLTSPSVLCPV*ASSSVR
Trigger: TCTGACAGAACTGGAGGCCCAGACCGGACAGAGCAC...ACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 72 bp CCCATGCCTGTCCATGATGCCAGGCTGTCATCACGATaGGATGCCCTGGGGAGGTGCTACCACTACCCAGTC +
Preference number: 4 (lower is better)
Translates to: PMPVHDARLSSR*DALGRCYHYPV
Trigger: GACTGGGTAGTGGTAGCACCTCCCCAGGGCATCCAATCGTGATGACAGCCTGGCATCATGGACAGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCACACCCCTCGGCTCTaGAGCTCTCTCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: QCMGPWKDYFPPVTKQQRHTPRL*SSLREL
Trigger: CAGTTCTCTGAGAGAGCTTCAGAGCCGAGGGGTGTG...CCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCACACTACAGGCGTGAAGACCCGTGTGCAGGGGCCCAAACCACACATGCTCACGCTAGGAAGCACCACTaGAGGTCCAAACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: AHYRREDPCAGAQTTHAHARKHH*RSKLPG
Trigger: CCCAGGAAGTTTGGACCTGCAGTGGTGCTTCCTAGC...GTGAGCATGTGTGGTTTGGGCCCCTGCACACGGGTCTTCACGCCTGTAGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCGTCTATGAGGGAGGATaGTGGCCCAGAGTGGTACTT +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPVYEGG*WPRVVL
Trigger: AAGTACCACTCTGGGCCAGCATCCTCCCTCATAGAC...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCACACTACAGGCGTGAAGACCCGTGTGCAGGGGCCCAAACCACACATGCTCACCTTCAGGAGGTGTCCTaGCACAGAGGGATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AHYRREDPCAGAQTTHAHLQEVS*HRGMGS
Trigger: ACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAG...GTGAGCATGTGTGGTTTGGGCCCCTGCACACGGGTCTTCACGCCTGTAGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp GGACCACACCATGGAAGGAGAGGCCTGATGGCTGCTGGCGGCTTGACTCCCACATCTGTCAGAGCCATTTaGACTGGAGCTGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: GPHHGRRGLMAAGGLTPTSVRAI*TGAVLG
Trigger: TCCCAGCACAGCTCCAGTGCAAATGGCTCTGACAGA...TGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTGTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGCCTCTCCAGATGCAGTaGCTTCAGATCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKPLQMQ*LQIQLY
Trigger: GTACAGCTGGATCTGAAGGCACTGCATCTGGAGAGG...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGTTCCATGGCAGGACTTaGGGTGGAGCTGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQFHGRT*GGAAQQ
Trigger: CTGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAA...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CGAGCCTTCCCCTCCCCGGTGCTGTCGTGCCTCAGCCCGAACTCCTCAGCTAACGACACAGCTTCTTTCTaGGAAAGGTCCAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: RAFPSPVLSCLSPNSSANDTASF*ERSRVV
Trigger: CACAACTCTGGACCTTTCCCAGAAAGAAGCTGTGTC...GTTAGCTGAGGAGTTCGGGCTGAGGCACGACAGCACCGGGGAGGGGAAGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp GTGTGCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCAGAGACGGTGGTGGGTaGCAGCTGTCTGTGGTCCCC +
Preference number: 4 (lower is better)
Translates to: VCRGPNHTCSLPGMARSIRDGGG*QLSVVP
Trigger: GGGGACCACAGACAGCTGCCACCCACCACCGTCTCT...GATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACTGTGTCAGTCACGCCTaGGAGGTCCTTCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYCVSHA*EVLQEV
Trigger: CACCTCCTGAAGGACCTCCCAGGCGTGACTGACACA...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTACGGGGGCTTCTCGCTTaGCTTCCTGCGGCCATGTCT +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVRGLLA*LPAAMS
Trigger: AGACATGGCCGCAGGAAGCCAAGCGAGAAGCCCCCG...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGACTCGCAGCCTGTCATaGGAACTCAGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARTRSLS*ELRDVG
Trigger: TCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGT...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATCAGCCTGTGCAGGGCTaGGCGGTGAGGAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDQPVQG*AVRKAV
Trigger: CACAGCCTTCCTCACCGCCCAGCCCTGCACAGGCTG...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp ACATCTGCTCCCATGCCTGTCCATGATGCCAGGCTGTCATCACGATTGGATGCCCACCTGGCTGACCCTTaGCTGTCTGAGCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: TSAPMPVHDARLSSRLDAHLADP*LSEPGS
Trigger: GCTCCCAGGCTCAGACAGCCAAGGGTCAGCCAGGTG...GGCATCCAATCGTGATGACAGCCTGGCATCATGGACAGGCATGGGAGCAGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTATCCTGGGCTCAAAGGTaGCCAGCCGCTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVSWAQR*PAAAHT
Trigger: TGTATGGGCAGCGGCTGGTCACCTTTGAGCCCAGGA...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGCTTTCCTATTGGACCTaGCAAAGGTCAGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKLSYWT*QRSGAQ
Trigger: CTGTGCTCCTGACCTTTGTCAGGTCCAATAGGAAAG...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTATCCTCCTGCTCACTGTaGTGTGCCGAGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVSSCSL*CAEPSP
Trigger: AGGGGAAGGCTCGGCACATCACAGTGAGCAGGAGGA...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp AGATGTGCTGGGCTGGGGAAACAGCTGAGTAGGCAAACCACTTGCCATTCAAACGTTCCTGCCAGGACCTaGGCTCCTCCACCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: RCAGLGKQLSRQTTCHSNVPART*APPPRR
Trigger: ACGCCGAGGTGGAGGAGCGCAGGTCCTGGCAGGAAC...GTTTGAATGGCAAGTGGTTTGCCTACTCAGCTGTTTCCCCAGCCCAGCACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAACCACACCAGCACCATaGTTCTCTGCCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITTTPAP*FSARRS
Trigger: GGAGCGTCTGGCAGAGAAGCATGGTGCTGGTGTGGT...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAGCCATGTCTAGGGGCTaGTCTGGTCTCCTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVAMSRG*SGLLAT
Trigger: AGTGGCCAGGAGACCAGAGCAGCCCCTAGACATGGC...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CGAGCCTTCCCCTCCCCGGTGCTGTCGTGCCTCAGCCCGAACTCCTCAGCTAACTTCAGCTGGAGATCATaGGACTCATCAAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: RAFPSPVLSCLSPNSSANFSWRS*DSSKAT
Trigger: AGTGGCTTTTGATGAGTCCCATGATCTCCAGCTGAA...GTTAGCTGAGGAGTTCGGGCTGAGGCACGACAGCACCGGGGAGGGGAAGGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACATTCCATGGCAGGACTTaGGGTGGAGCTGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITFHGRT*GGAAQQ
Trigger: CTGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAA...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCCTGGCTTCTAGGGCCTaGGCACATTCGTCCACCACC +
Preference number: 4 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSLASRA*AHSSTT
Trigger: GGTGGTGGACGAATGTGCCCAGGCCCTAGAAGCCAG...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGCCCTGTGAGAGACGGTaGTGGGTGGCAGCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLPCERR*WVAAVC
Trigger: ACAGACAGCTGCCACCCACCACCGTCTCTCACAGGG...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp AGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGCCTGCCACAGAGGGATaGGAAGTAAGCTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: RMTVAMASWPCKALKASMPATEG*EVSCPW
Trigger: CCACGGGCAGCTTACTTCCCATCCCTCTGTGGCAGG...CATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGAACTCCTCAGCTAACTaGTGGACTCGCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARNSSAN*WTRSLS
Trigger: TGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTT...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CAA 72 bp CACCATGGAAGGAGAGGCCTGATGGCTGCTGGCGGCTaGACTCCCACACACATGCTGACCTCTCCAAGTATG +
Preference number: 4 (lower is better)
Translates to: HHGRRGLMAAGG*TPTHMLTSPSM
Trigger: CATACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCCTCTCCTTCCATGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 72 bp AGCAACAGTCAGGGTGGGGAACATCCAGGACAGGGCTaGTGGGACCCAAAGGCACACTACAGGCGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: SNSQGGEHPGQG*WDPKAHYRRED
Trigger: GTCTTCACGCCTGTAGTGTGCCTTTGGGTCCCACAAGCCCTGTCCTGGATGTTCCCCACCCTGACTGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 72 bp AGCAGCTTCAGAGGGCCATCAGACGATGCACCTGTGTaGGTGGCTAGAACCACATCTGCCGCAGTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSFRGPSDDAPV*VARTTSAAVRL
Trigger: GAGCCTCACTGCGGCAGATGTGGTTCTAGCCACCAACACAGGTGCATCGTCTGATGGCCCTCTGAAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp GACATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTTGAGCATGGTATCTTCCTGGGCTCAAAGGTaGCCAGCCGCTGCCCATACA +
Preference number: 4 (lower is better)
Translates to: DINGRRGPWSCEGLSMVSSWAQR*PAAAHT
Trigger: TGTATGGGCAGCGGCTGGTCACCTTTGAGCCCAGGA...AGATACCATGCTCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACACAGGAGGCCCATGGATaGTGGCAAGTTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITQEAHG*WQVLSG
Trigger: CCCAGAAAGAACTTGCCATCATCCATGGGCCTCCTG...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp AGAAGGAAGACCAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAAGGAGGCGGGCGGGGTaGCCCAGGCGCAGAATCCGC +
Preference number: 4 (lower is better)
Translates to: RRKTKVWILQSFLEGGTQRRRAG*PRRRIR
Trigger: GCGGATTCTGCGCCTGGGTCACCCCGCCCGCCTCCT...TTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTGGTCTTCCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTGGTCTATGTCCCTTCTaGTGTCAGCAACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAIGLCPF*CQQQSG
Trigger: CCCAGATTGTTGCTGACATCAGAAGGGACATAGACC...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAGCCGCAGTGAGGCTCTaGACTATGGCTGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVAAVRL*TMAASS
Trigger: GGAAGAAGCAGCCATAGTTCAGAGCCTCACTGCGGC...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGCCTGGATGTGCAAAGTaGCGAGGCGAACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVPGCAK*RGELRP
Trigger: CGGGCGAAGTTCGCCTCGTCACTTTGCACATCCAGG...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAATGGAGAGGCTCTGTCTaGGCAGATCCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKWRGSV*ADPPEG
Trigger: ACCTTCAGGTGGATCTGCTCAGACAGAGCCTCTCCA...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCAGTCTATGAGGGAGGATaGTGGCCCAGAGTGGTACTT +
Preference number: 4 (lower is better)
Translates to: VTAEDRMTVAMASWPCKAVYEGG*WPRVVL
Trigger: AAGTACCACTCTGGGCCAGCATCCTCCCTCATAGAC...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACGCAGAATCCGCTTCTTaGACAGAGCCAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDAESAS*TEPDAP
Trigger: TGGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGC...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTGCTCTGAACTATGGCTaGTTCTTCCCTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAIALNYG*FFPLLQ
Trigger: CTGAAGGAGAGGGAAGAAGCAGCCATAGTTCAGAGC...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCGAGCTTTGCTGCCGCTaGAGCCTCTCCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSELCCR*SLSRCS
Trigger: ACTGCATCTGGAGAGGCTGCAGCGGCAGCAAAGCTC...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGCCCTGTGCGCTGGCTaGATACCTGAAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RMTVAMASWPCKALKASMALCAG*IPEASA
Trigger: TGCTGAAGCTTCAGGTATCCAGCCAGCGCACAGGGC...CATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTGATGCTGGCCCAGAGTaGTACTTCTTCAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSDAGPE*YFFSVI
Trigger: GATGACACTGAAGAAGTACCACTCTGGGCCAGCATC...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCATGTGGCAGGACTTGGGGTaGAGCTGCCCAACAGGATGT +
Preference number: 4 (lower is better)
Translates to: HTIHAHCVTAEDRMTVAMWQDLG*SCPTGC
Trigger: ACATCCTGTTGGGCAGCTCCACCCCAAGTCCTGCCA...CATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTATGGCAGGACTTGGGGTaGAGCTGCCCAACAGGATGT +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVWQDLG*SCPTGC
Trigger: ACATCCTGTTGGGCAGCTCCACCCCAAGTCCTGCCA...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp TCCGAGACCTCGTCTCTCCCCAGTGGCCAGGGACTCTGGTTCAGCACAATCTCCACGATGCACCTGTGTTaGTGGCTAGAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: SETSSLPSGQGLWFSTISTMHLC*WLEPHL
Trigger: CAGATGTGGTTCTAGCCACCAACACAGGTGCATCGT...GGAGATTGTGCTGAACCAGAGTCCCTGGCCACTGGGGAGAGACGAGGTCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACGATGCACCTGTGTTaGTGGCTAGAACCACATCTG +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAITMHLC*WLEPHL
Trigger: CAGATGTGGTTCTAGCCACCAACACAGGTGCATCGT...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTTGTGAGAGACGGTGGTaGGTGGCAGCTGTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EGLLPTSHQAAEARPLQTCERRW*VAAVCG
Trigger: ACCACAGACAGCTGCCACCCACCACCGTCTCTCACA...AGTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCATGGCAATGTCACCTGCCTaGACCCCAGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: HTIHAHCVTAEDRMTVAMAMSPA*TPASTR
Trigger: TCTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGC...CATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGTTGTTGACAGTGTaGGAATCACAGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: VQSAGEGAVSEGEQCMGPWLLTV*ESQMTA
Trigger: GGCAGTCATCTGTGATTCCCACACTGTCAACAACCA...GGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACTCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGTGGTTGTTGACAGTGTaGGAATCACAGATGACTGCC +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKWLLTV*ESQMTA
Trigger: GGCAGTCATCTGTGATTCCCACACTGTCAACAACCA...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAGTGCTCTGTCCGGTCTaGGCCTCCAGTTCTGTCAGA +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVVLCPV*ASSSVR
Trigger: TCTGACAGAACTGGAGGCCCAGACCGGACAGAGCAC...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp ACTAGCCTCCAGTGCAACAAGAGCCAGTGTCTTTCCTCAAGTGCCCACATCTGCCTACACTGCCAGAGCTaGCAGGGCTCCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TSLQCNKSQCLSSSAHICLHCQS*QGSSCS
Trigger: TGAGCAGGAGGAGCCCTGCCAGCTCTGGCAGTGTAG...GCAGATGTGGGCACTTGAGGAAAGACACTGGCTCTTGTTGCACTGGAGGCTAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCGCAGTGAGGCTCTaGACTATGGCTGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVAAVRL*TMAASS
Trigger: GGAAGAAGCAGCCATAGTTCAGAGCCTCACTGCGGC...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACCTTTCCTATTGGACCTaGCAAAGGTCAGGAGCACAG +
Preference number: 4 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYLSYWT*QRSGAQ
Trigger: CTGTGCTCCTGACCTTTGTCAGGTCCAATAGGAAAG...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCTCCCCATGCTCTGTaGAATAATCCACCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QCMGPWKDYFPPVTKQQRPPHAL*NNPPRS
Trigger: AGACCTTGGTGGATTATTTCACAGAGCATGGGGAGG...CCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CACCACCACCACATCAAAGTAGTCCTCAGGCAGCAGCTTCAGAGGGCCATCAGAGCTAGGAAGCACCACTaGAGGTCCAAACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HHHHIKVVLRQQLQRAIRARKHH*RSKLPG
Trigger: CCCAGGAAGTTTGGACCTGCAGTGGTGCTTCCTAGC...TCTGATGGCCCTCTGAAGCTGCTGCCTGAGGACTACTTTGATGTGGTGGTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR GCA 90 bp GTGTGCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCGCAGAATCCGCTTCTTaGACAGAGCCAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCRGPNHTCSLPGMARSIAESAS*TEPDAP
Trigger: TGGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGC...GATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCAGCTCTGAACTATGGCTaGTTCTTCCCTCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: VTAEDRMTVAMASWPCKAALNYG*FFPLLQ
Trigger: CTGAAGGAGAGGGAAGAAGCAGCCATAGTTCAGAGC...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAACCAGAGCCTGGATGTaGAAAGTGACGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: AEDRMTVAMASWPCKALKTRAWM*KVTRRT
Trigger: AGTTCGCCTCGTCACTTTGCACATCCAGGCTCTGGT...TTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCAGATGCTGGCCCAGAGTaGTACTTCTTCAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VTAEDRMTVAMASWPCKADAGPE*YFFSVI
Trigger: GATGACACTGAAGAAGTACCACTCTGGGCCAGCATC...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGATGGCAAGTTCTTTCTaGGCCAGTGCAAAGGACACA +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARMASSF*ASAKDT
Trigger: TGTGTCCTTTGCACTGGCCCAGAAAGAACTTGCCAT...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGGATTTCCCTTGGACTaGCTGTCCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDGFPLD*LSSSSS
Trigger: GCTGGAGGAGGAGGACAGCCAGTCCAAGGGAAATCC...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACCCCAGTGGCCAGTTaGCTGTTTTCATTAGTATCA +
Preference number: 4 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAITPVAS*LFSLVS
Trigger: TGATACTAATGAAAACAGTCAACTGGCCACTGGGGT...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGAAAAGCCACTGTGACTaGTTTTTGGGTGATTCGGGT +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARKSHCD*FLGDSG
Trigger: ACCCGAATCACCCAAAAATCAGTCACAGTGGCTTTT...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGCAGGAGGCCCATGGATaGTGGCAAGTTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVQEAHG*WQVLSG
Trigger: CCCAGAAAGAACTTGCCATCATCCATGGGCCTCCTG...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTAGCCACAAACTCCTCACAGGAGGCCCATGGATaGTGGCAAGTTCTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRDVGNSNWDSLLATNSSQEAHG*WQVLSG
Trigger: CCCAGAAAGAACTTGCCATCATCCATGGGCCTCCTG...TGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCTTGCTTCACAGCTTaGAGGATTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: YGALEGLLPTSHQAAEARPCFTA*RIISTT
Trigger: TGTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGG...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGCTAGGAAGCACCACTaGAGGTCCAAACTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDARKHH*RSKLPG
Trigger: CCCAGGAAGTTTGGACCTGCAGTGGTGCTTCCTAGC...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATCTTCAGGAGGTGTCCTaGCACAGAGGGATGGGAAGT +
Preference number: 4 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDLQEVS*HRGMGS
Trigger: ACTTCCCATCCCTCTGTGGCAGGACACCTCCTGAAG...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTACCAGAGCCTGGATGTaGAAAGTGACGAGGCGAACT +
Preference number: 4 (lower is better)
Translates to: EGLLPTSHQAAEARPLQTTRAWM*KVTRRT
Trigger: AGTTCGCCTCGTCACTTTGCACATCCAGGCTCTGGT...AGTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGCCTCTCCAGATGCAGTaGCTTCAGATCCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLPLQMQ*LQIQLY
Trigger: GTACAGCTGGATCTGAAGGCACTGCATCTGGAGAGG...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACCTGTCCAGGTTCAGCTaGAGATCATGGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDLSRFS*RSWDSS
Trigger: TGATGAGTCCCATGATCTCCAGCTGAACCTGGACAG...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGGACACAGCTTCTTTCTaGGAAAGGTCCAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQDTASF*ERSRVV
Trigger: CACAACTCTGGACCTTTCCCAGAAAGAAGCTGTGTC...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp ATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAATGGCAAGTTCTTTCTaGGCCAGTGCAAAGGACACA +
Preference number: 4 (lower is better)
Translates to: MASWPCKALKASMGPGQAMASSF*ASAKDT
Trigger: TGTGTCCTTTGCACTGGCCCAGAAAGAACTTGCCAT...TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp AGATGTGCTGGGCTGGGGAAACAGCTGAGTAGGCAAACCACTTGCCATTCAAACGCAATGTCACCTGCCTaGACCCCAGCATCCACCAGA +
Preference number: 4 (lower is better)
Translates to: RCAGLGKQLSRQTTCHSNAMSPA*TPASTR
Trigger: TCTGGTGGATGCTGGGGTCCAGGCAGGTGACATTGC...GTTTGAATGGCAAGTGGTTTGCCTACTCAGCTGTTTCCCCAGCCCAGCACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAGGGAACTCAGGGATGTaGGAAACTCCAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVGNSGM*ETPTGT
Trigger: AGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCC...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp ACTAGCCTCCAGTGCAACAAGAGCCAGTGTCTTTCCTCAAGTGCCCACATCTGCACTCGCAGCCTGTCATaGGAACTCAGGGATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSLQCNKSQCLSSSAHICTRSLS*ELRDVG
Trigger: TCCCACATCCCTGAGTTCCCATGACAGGCTGCGAGT...GCAGATGTGGGCACTTGAGGAAAGACACTGGCTCTTGTTGCACTGGAGGCTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp TTATCCTGCGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGGTTCCTGCCAGGACCTaGGCTCCTCCACCTCGGCGT +
Preference number: 4 (lower is better)
Translates to: LSCVFLFLPKTWSMSLLMVPART*APPPRR
Trigger: ACGCCGAGGTGGAGGAGCGCAGGTCCTGGCAGGAAC...CATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACGCAGGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR GCA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGTTCTTTCTGGGCCAGTaGAAAGGACACAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQFFLGQ*KGHSFF
Trigger: AAAGAAGCTGTGTCCTTTGCACTGGCCCAGAAAGAA...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTGCGTCTTTTTGTTCTTaGCAAAGACCTGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: AGHARHSKHQWGLARQGSASFCS*QRPGLC
Trigger: ACATAGACCAGGTCTTTGGCAAGAACAAAAAGACGC...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp AGTGCTGGCGAGGGTGCAGTCTCTGAGGGTGAGCAGTGTATGGGGCCCTGGAAGTTCTCTCTCTTATCCTaGGTCTTTTTGTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SAGEGAVSEGEQCMGPWKFSLLS*VFLFLP
Trigger: TGGCAAGAACAAAAAGACGCAGGATAAGAGAGAGAA...CTTCCAGGGCCCCATACACTGCTCACCCTCAGAGACTGCACCCTCGCCAGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGTCTGTCAGAGCCATTTaGACTGGAGCTGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVSVRAI*TGAVLG
Trigger: TCCCAGCACAGCTCCAGTGCAAATGGCTCTGACAGA...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAACTGTGACTGATTTTTaGGTGATTCGGGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITTVTDF*VIRVRT
Trigger: GGTCCTGACCCGAATCACCCAAAAATCAGTCACAGT...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACACTGTGACTGATTTTTaGGTGATTCGGGTCAGGACC +
Preference number: 4 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDTVTDF*VIRVRT
Trigger: GGTCCTGACCCGAATCACCCAAAAATCAGTCACAGT...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp ATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCATTCAGCTGGAGATCATaGGACTCATCAAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: MASWPCKALKASMGPGQAFSWRS*DSSKAT
Trigger: AGTGGCTTTTGATGAGTCCCATGATCTCCAGCTGAA...TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGCCATGCTGTCCAGGTTCAGCTaGAGATCATGGGACTCATCA +
Preference number: 4 (lower is better)
Translates to: HTIHAHCVTAEDRMTVAMLSRFS*RSWDSS
Trigger: TGATGAGTCCCATGATCTCCAGCTGAACCTGGACAG...CATGGCCACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACGTTGTAGAAAGAGAGTaGGGGTATTTCCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRTTSHQSPSSRGQAITDVVERE*GYFHGR
Trigger: CCTGCCATGGAAATACCCCCACTCTCTTTCTACAAC...GTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACACAGCTTCTTTCTaGGAAAGGTCCAGAGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITDTASF*ERSRVV
Trigger: CACAACTCTGGACCTTTCCCAGAAAGAAGCTGTGTC...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp TTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTGGAATCCAGCATTTTGCAGCTGGGCCCTCTTaGCCGGGTCCAGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FLMRVLWDGKHKLGIQHFAAGPS*PGPGPC
Trigger: ACAGGGCCCTGGACCCGGCCAAGAGGGCCCAGCTGC...AAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp TGGGATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGCCGAGGCCCAGCACATaGTGGCCTGGTGCATTCGGT +
Preference number: 4 (lower is better)
Translates to: WDGKHKLGIQHFNEATVRPRPST*WPGAFG
Trigger: ACCGAATGCACCAGGCCATCATGTGCTGGGCCTCGG...CCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGCCTCCCCATGCTCTGTaGAATAATCCACCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVPPHAL*NNPPRS
Trigger: AGACCTTGGTGGATTATTTCACAGAGCATGGGGAGG...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp ATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAGCGTCTTTTTGTTCTTaGCAAAGACCTGGTCTATGT +
Preference number: 4 (lower is better)
Translates to: MASWPCKALKASMGPGQAASFCS*QRPGLC
Trigger: ACATAGACCAGGTCTTTGGCAAGAACAAAAAGACGC...TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp ATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGGTGGGCCTGGGAGCTTTGCTaGCGCTGCAGCCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: MGNTNLESSILTKQQSGWAWELC*RCSLSR
Trigger: TCTGGAGAGGCTGCAGCGGCAGCAAAGCTCCCAGGC...CCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTAGTTGTAGAAAGAGAGTaGGGGTATTTCCATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVVVERE*GYFHGR
Trigger: CCTGCCATGGAAATACCCCCACTCTCTTTCTACAAC...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAGTTGGAGATGAAGCGTGGCTGGATCCAGAGACTCCAGGATAATATCACCAGGGGGAACTCAGGGATGTaGGAAACTCCAACTGGGACT +
Preference number: 4 (lower is better)
Translates to: ELEMKRGWIQRLQDNITRGNSGM*ETPTGT
Trigger: AGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTCCC...CCTGGTGATATTATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp ACTAGCCTCCAGTGCAACAAGAGCCAGTGTCTTTCCTCAAGTGCCCACATCTGCTTTTCTCCACAGCCGTaGATTTCAGGCAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TSLQCNKSQCLSSSAHICFSPQP*ISGRWW
Trigger: CCACCATCTGCCTGAAATCCACGGCTGTGGAGAAAA...GCAGATGTGGGCACTTGAGGAAAGACACTGGCTCTTGTTGCACTGGAGGCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACCACACCCCTCGGCTCTaGAGCTCTCTCAGAGAACTG +
Preference number: 4 (lower is better)
Translates to: RLFVLAKDLVYVPSDVSNHTPRL*SSLREL
Trigger: CAGTTCTCTGAGAGAGCTTCAGAGCCGAGGGGTGTG...GTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCAAAAGCCACTGTGACTaGTTTTTGGGTGATTCGGGT +
Preference number: 4 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSKSHCD*FLGDSG
Trigger: ACCCGAATCACCCAAAAATCAGTCACAGTGGCTTTT...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp AGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGTCTTTCTCTCGGCCTTaGAAGCCATCAACAGACTTA +
Preference number: 4 (lower is better)
Translates to: RMTVAMASWPCKALKASMSFSRP*KPSTDL
Trigger: TAAGTCTGTTGATGGCTTTCAAGGCCGAGAGAAAGA...CATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR TCA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAAAAAAGCATGGTTGTTaGCAGTGTGGGAATCACAGA +
Preference number: 4 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITKKHGC*QCGNHR
Trigger: TCTGTGATTCCCACACTGTCAACAACCATGCTTTTT...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp CGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACGCCCTGTGCGCTGGCTaGATACCTGAAGCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLFVLAKDLVYVPSDVSNALCAG*IPEASA
Trigger: TGCTGAAGCTTCAGGTATCCAGCCAGCGCACAGGGC...GTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp GCAGGGGCCCAAACCACACATGCTCACTTCCAGGAATGGCAAGGTCAATCTTCCTTCTTGCCAAAGACCTaGTCTATGTCCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: AGAQTTHAHFQEWQGQSSFLPKT*SMSLLM
Trigger: CATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAA...GGAAGATTGACCTTGCCATTCCTGGAAGTGAGCATGTGTGGTTTGGGCCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp ACATCTGGGCCAGAAGGAAAGAATGCTCACCTCCAACACAAGCAAATATCCACTGGATTTCCCTTGGACTaGCTGTCCTCCTCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TSGPEGKNAHLQHKQISTGFPLD*LSSSSS
Trigger: GCTGGAGGAGGAGGACAGCCAGTCCAAGGGAAATCC...AGTGGATATTTGCTTGTGTTGGAGGTGAGCATTCTTTCCTTCTGGCCCAGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
3UTR CAA 72 bp GAACTCAGGGATGTGGGAAACTCCAACTGGGACTCCTaGCTAGCCACAAACTCCTCAATCGTAGCCCTAAAG +
Preference number: 4 (lower is better)
Translates to: ELRDVGNSNWDS*LATNSSIVALK
Trigger: CTTTAGGGCTACGATTGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp GCTGGAAAGGATGAGTTGGAGATGAAGCGTGGCTGGATCCAGAGACTCCAGGATCCTTGCTTCACAGCTTaGAGGATTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: AGKDELEMKRGWIQRLQDPCFTA*RIISTT
Trigger: TGTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGG...ATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTCATCCTTTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGTTCTTTCTGGGCCAGTaGAAAGGACACAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVFFLGQ*KGHSFF
Trigger: AAAGAAGCTGTGTCCTTTGCACTGGCCCAGAAAGAA...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp CTCAGGGATGTGGGAAACTCCAACTGGGACTCCTTGCTAGCCACAAACTCCTCATTCTTTCTGGGCCAGTaGAAAGGACACAGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LRDVGNSNWDSLLATNSSFFLGQ*KGHSFF
Trigger: AAAGAAGCTGTGTCCTTTGCACTGGCCCAGAAAGAA...TGAGGAGTTTGTGGCTAGCAAGGAGTCCCAGTTGGAGTTTCCCACATCCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR GCA 90 bp CGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACGCAGAATCCGCTTCTTaGACAGAGCCAGACGCTCCA +
Preference number: 4 (lower is better)
Translates to: RLFVLAKDLVYVPSDVSNAESAS*TEPDAP
Trigger: TGGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGC...GTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR GCA 90 bp AGAAGGAAGACCAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAACCACACCAGCACCATaGTTCTCTGCCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: RRKTKVWILQSFLEGGTQTTPAP*FSARRS
Trigger: GGAGCGTCTGGCAGAGAAGCATGGTGCTGGTGTGGT...TTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTGGTCTTCCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR GCA 90 bp AGACATTTTTCAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGGCTGTGGGGCTACACTaGCAGAGCTGGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RHFSSNQTHFPNESSLGWAVGLH*QSWQGS
Trigger: GGAGCCCTGCCAGCTCTGGCAGTGTAGCCCCACAGC...CCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTGAAAAATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATTTCTTGCCAAAGACCTaGTCTATGTCCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDFLPKT*SMSLLM
Trigger: CATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAA...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
3UTR CAA 72 bp CTGTCCTCAGCCAGAAAACCAACTTCACCTTTCCTATaGGACCTGACAAAGGTCAGGAGCACAGCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSSARKPTSPFL*DLTKVRSTASF
Trigger: GAAAGAGGCTGTGCTCCTGACCTTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTGAGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp CGAGCACGGGTAACAGCAACATTAATCCGCCTGTCCTCAGCCAGAAAACCAACTAAAAGCCACTGTGACTaGTTTTTGGGTGATTCGGGT +
Preference number: 4 (lower is better)
Translates to: RARVTATLIRLSSARKPTKSHCD*FLGDSG
Trigger: ACCCGAATCACCCAAAAATCAGTCACAGTGGCTTTT...AGTTGGTTTTCTGGCTGAGGACAGGCGGATTAATGTTGCTGTTACCCGTGCTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp TGGGATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGTGGAGAGGCTCTGTCTaGGCAGATCCACCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: WDGKHKLGIQHFNEATVRWRGSV*ADPPEG
Trigger: ACCTTCAGGTGGATCTGCTCAGACAGAGCCTCTCCA...CCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGAAAAAGCATGGTTGTTaGCAGTGTGGGAATCACAGA +
Preference number: 4 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVKKHGC*QCGNHR
Trigger: TCTGTGATTCCCACACTGTCAACAACCATGCTTTTT...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR GCA 90 bp GAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACAGACTTTCTCTCTCTTATCCTaGGTCTTTTTGTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: EGLLPTSHQAAEARPLQTFSLLS*VFLFLP
Trigger: TGGCAAGAACAAAAAGACGCAGGATAAGAGAGAGAA...AGTCTGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CCA 90 bp GAGTTGGAGATGAAGCGTGGCTGGATCCAGAGACTCCAGGATAATATCACCAGGTTCAGCTGGAGATCATaGGACTCATCAAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: ELEMKRGWIQRLQDNITRFSWRS*DSSKAT
Trigger: AGTGGCTTTTGATGAGTCCCATGATCTCCAGCTGAA...CCTGGTGATATTATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGACATTTTTCAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGTGGGGCACTTGGGTTTaGGGACACGGCTGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: RHFSSNQTHFPNESSLGWWGTWV*GHGCGP
Trigger: AGGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCA...CCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTGAAAAATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp TTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTGGAATCCAGCATTTTAGGTGCTGGGGCACTTaGGTTTGGGGACACGGCTGT +
Preference number: 4 (lower is better)
Translates to: FLMRVLWDGKHKLGIQHFRCWGT*VWGHGC
Trigger: ACAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCT...AAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGACATTTTTCAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGCCTCGAGTCCCCACCTaGCTGACCCTTGGCTGTCTG +
Preference number: 4 (lower is better)
Translates to: RHFSSNQTHFPNESSLGWPRVPT*LTLGCL
Trigger: CAGACAGCCAAGGGTCAGCCAGGTGGGGACTCGAGG...CCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTGAAAAATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp AGACATTTTTCAAGCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGACTGGCCCAGAGTGGTaGTGCTGGCCGAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RHFSSNQTHFPNESSLGWTGPEW*CWPSTW
Trigger: CCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGT...CCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGCTTGAAAAATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTCCAGGGCCCTGTCCTTaGTCCCACTGCCTGCATACA +
Preference number: 4 (lower is better)
Translates to: AIRHIFLMRVLWDGKHKLPGPCP*SHCLHT
Trigger: TGTATGCAGGCAGTGGGACCAAGGACAGGGCCCTGG...AAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CCA 90 bp GATGTCATCCAGGTATTCAAAGGCTGTGCGTACCTCCCCATGCTCTGTGAAATAATGGCAAGTTCTTTCTaGGCCAGTGCAAAGGACACA +
Preference number: 4 (lower is better)
Translates to: DVIQVFKGCAYLPMLCEIMASSF*ASAKDT
Trigger: TGTGTCCTTTGCACTGGCCCAGAAAGAACTTGCCAT...TATTTCACAGAGCATGGGGAGGTACGCACAGCCTTTGAATACCTGGATGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp ATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGGTGGTGCTGGCCGAGCACTTaGAGAAGCTACAGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: MGNTNLESSILTKQQSGWCWPST*RSYRCC
Trigger: ACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCA...CCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp GATGTCATCCAGGTATTCAAAGGCTGTGCGTACCTCCCCATGCTCTGTGAAATAACCCCAGTGGCCAGTTaGCTGTTTTCATTAGTATCA +
Preference number: 4 (lower is better)
Translates to: DVIQVFKGCAYLPMLCEITPVAS*LFSLVS
Trigger: TGATACTAATGAAAACAGTCAACTGGCCACTGGGGT...TATTTCACAGAGCATGGGGAGGTACGCACAGCCTTTGAATACCTGGATGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp CCGCCTGTCCTCAGCCAGAAAACCAACTTCACCTTTCCTATTGGACCTGACAAAGTTGTAGAAAGAGAGTaGGGTTTTTCAGGCGTTTGT +
Preference number: 4 (lower is better)
Translates to: PPVLSQKTNFTFPIGPDKVVERE*GFSGVC
Trigger: ACAAACGCCTGAAAAACCCCACTCTCTTTCTACAAC...TTTGTCAGGTCCAATAGGAAAGGTGAAGTTGGTTTTCTGGCTGAGGACAGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR TCA 90 bp CGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACCCTTGCTTCACAGCTTaGAGGATTATTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: RLFVLAKDLVYVPSDVSNPCFTA*RIISTT
Trigger: TGTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGG...GTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CCA 90 bp GCAATCAGACACATTTTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTAACTCCTCAGCTAACTaGTGGACTCGCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: AIRHIFLMRVLWDGKHKLNSSAN*WTRSLS
Trigger: TGACAGGCTGCGAGTCCACCAGTTAGCTGAGGAGTT...AAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAAAATGTGTCTGATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp TTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTGGAATCCAGCATTTTGGTCTATGTCCCTTCTaGTGTCAGCAACAATCTGGG +
Preference number: 4 (lower is better)
Translates to: FLMRVLWDGKHKLGIQHFGLCPF*CQQQSG
Trigger: CCCAGATTGTTGCTGACATCAGAAGGGACATAGACC...AAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp ATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGGTGGTCTTTCTCTCGGCCTTaGAAGCCATCAACAGACTTA +
Preference number: 4 (lower is better)
Translates to: MGNTNLESSILTKQQSGWSFSRP*KPSTDL
Trigger: TAAGTCTGTTGATGGCTTTCAAGGCCGAGAGAAAGA...CCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR TCA 90 bp TTCCTAATGAGAGTTCTCTGGGATGGGAAACACAAACTTGGAATCCAGCATTTTACCCCAGTGGCCAGTTaGCTGTTTTCATTAGTATCA +
Preference number: 4 (lower is better)
Translates to: FLMRVLWDGKHKLGIQHFTPVAS*LFSLVS
Trigger: TGATACTAATGAAAACAGTCAACTGGCCACTGGGGT...AAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCAGAGAACTCTCATTAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS GCA 90 bp ACTCCAGGAGGCGGGCGGGGTGACCCAGGCGCAGAATCCGCTTCTTaGACAGAGCCAGACGCTCCACCAGGTTGTCCACAGCGATGTTGG +
Preference number: 5 (lower is better)
Translates to: TPGGGRGDPGAESAS*TEPDAPPGCPQRCW
Trigger: CCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGCGCCTGGGTCACCCCGCCCGCCTCCTGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTTCGCCCGGATTTCCCTaGGACTGGCTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAISPGFP*DWLSSS
Trigger: GGAGGAGGACAGCCAGTCCAAGGGAAATCCGGGCGA...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp ATGGCTAGCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAGAGGTGCTGGGGCACTaGGGTTTGGGGACACGGCTG +
Preference number: 5 (lower is better)
Translates to: MASWPCKALKASMGPGQAEVLGH*GLGTRL
Trigger: CAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTC...TGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGCTAGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGCTGGGGCACTTGGGTTaGGGGACACGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLLGHLG*GTRLWP
Trigger: GGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAG...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 90 bp GGCAGTAGCGGTGGCTACAGTGCATGCAGAACTGGCCCAGAGTGGTaGTGCTGGCCGAGCACTTGGAGAAGCTACAGGTGTTGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: GSSGGYSACRTGPEW*CWPSTWRSYRCCQP
Trigger: AGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTAGCCACCGCTACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 90 bp CTGCCTGCATACAGCACTCCTTCCCGGCTAATCCTCTGGCGGGCATaGGCACGAGCCTTTTCTCCACAGCCGTGGATTTCAGGCAGATGG +
Preference number: 5 (lower is better)
Translates to: LPAYSTPSRLILWRA*ARAFSPQPWISGRW
Trigger: CCATCTGCCTGAAATCCACGGCTGTGGAGAAAAGGCTCGTGCCCATGCCCGCCAGAGGATTAGCCGGGAAGGAGTGCTGTATGCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTTTTCCATGGCAGGACTaGGGGTGGAGCTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAIFPWQD*GWSCPT
Trigger: TGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAAA...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GCTGGCCATGCAAGGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTAGACGCTCCACCAGGTaGTCCACAGCGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: AGHARHSKHQWGLARQGSRRSTR*STAMLE
Trigger: CTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCT...ACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCCTTGCATGGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GTCACTGCAGAAGACAGGATGACGGTGGCCATGGCTAGCTGGCCATGCAAGGCACGCAGAATCCGCTTCTaGCACAGAGCCAGACGCTCC +
Preference number: 5 (lower is better)
Translates to: VTAEDRMTVAMASWPCKARRIRF*HRARRS
Trigger: GGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGCG...TGCCTTGCATGGCCAGCTAGCCATGGCCACCGTCATCCTGTCTTCTGCAGTGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS TCA 90 bp CACGAGCCTTTTCTCCACAGCCGTGGATTTCAGGCAGATGGTGGCTaGGGCAGTAGCGGTGGCTACAGTGCATGCAGAACTGGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: HEPFLHSRGFQADGG*GSSGGYSACRTGPE
Trigger: CTCTGGGCCAGTTCTGCATGCACTGTAGCCACCGCTACTGCCTCAGCCACCATCTGCCTGAAATCCACGGCTGTGGAGAAAAGGCTCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 90 bp AGCGGTGGCTACAGTGCATGCAGAACTGGCCCAGAGTGGTGGTGCTaGCCGAGCACTTGGAGAAGCTACAGGTGTTGTCAGCCTTCACCA +
Preference number: 5 (lower is better)
Translates to: SGGYSACRTGPEWWC*PSTWRSYRCCQPSP
Trigger: TGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTAGCCACCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 90 bp TTGGTCCCACTGCCTGCATACAGCACTCCTTCCCGGCTAATCCTCTaGCGGGCATGGGCACGAGCCTTTTCTCCACAGCCGTGGATTTCA +
Preference number: 5 (lower is better)
Translates to: LVPLPAYSTPSRLIL*RAWARAFSPQPWIS
Trigger: TGAAATCCACGGCTGTGGAGAAAAGGCTCGTGCCCATGCCCGCCAGAGGATTAGCCGGGAAGGAGTGCTGTATGCAGGCAGTGGGACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACTTGTCCACAGCGATGTaGGAGGGAGCACAGCACAGG +
Preference number: 5 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYLSTAM*EGAQHR
Trigger: CCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAA...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp CTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATGACGGTGGAGGTGCTGGGGCACTaGGGTTTGGGGACACGGCTG +
Preference number: 5 (lower is better)
Translates to: LDHTIHAHCVTAEDRMTVEVLGH*GLGTRL
Trigger: CAGCCGTGTCCCCAAACCCAAGTGCCCCAGCACCTC...CACCGTCATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS GCA 90 bp AGTAGCGGTGGCTACAGTGCATGCAGAACTGGCCCAGAGTGGTGGTaGTGGCCGAGCACTTGGAGAAGCTACAGGTGTTGTCAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: SSGGYSACRTGPEWW*WPSTWRSYRCCQPS
Trigger: TGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTAGCCACCGCTACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 90 bp AGTGCATGCAGAACTGGCCCAGAGTGGTGGTGCTGGCCGAGCACTTaGAGAAGCTACAGGTGTTGTCAGCCTTCACCACAGCAGACACCA +
Preference number: 5 (lower is better)
Translates to: SACRTGPEWWCWPST*RSYRCCQPSPQQTP
Trigger: TGGTGTCTGCTGTGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp CACACCAGCACCATGCTTCTCTGCCAGACGCTCCATCAGGCTGCGGGACAGCCCTTATTTCCACCACAGTaGTGGTTTTCCCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: HTSTMLLCQTLHQAAGQPLFPPQ*WFSQCQ
Trigger: CTGGCACTGGGAAAACCACAACTGTGGTGGAAATAA...GGGCTGTCCCGCAGCCTGATGGAGCGTCTGGCAGAGAAGCATGGTGCTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp CACCACCACCACATCAAAGTAGTCCTCAGGCAGCAGCTTCAGAGGGCCATCAGACGCAGAATCCGCTTCTaGCACAGAGCCAGACGCTCC +
Preference number: 5 (lower is better)
Translates to: HHHHIKVVLRQQLQRAIRRRIRF*HRARRS
Trigger: GGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGCG...TCTGATGGCCCTCTGAAGCTGCTGCCTGAGGACTACTTTGATGTGGTGGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GGCCTGATGGCTGCTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTGAGAAGCTACAGGTGTaGTCAGCCTTCACCACAGCA +
Preference number: 5 (lower is better)
Translates to: GLMAAGGLTPTHMLTSPSEKLQV*SAFTTA
Trigger: TGCTGTGGTGAAGGCTGACAACACCTGTAGCTTCTC...ACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS GCA 90 bp ACCCACAATATCACCAGAGGTGAAGCTGTTGCTAGGAAGCACCACTaGAGGTCCAAACTTCCTGGGCTCAAAGGTGACCAGCCGCTGCCC +
Preference number: 5 (lower is better)
Translates to: THNITRGEAVARKHH*RSKLPGLKGDQPLP
Trigger: GGGCAGCGGCTGGTCACCTTTGAGCCCAGGAAGTTTGGACCTGCAGTGGTGCTTCCTAGCAACAGCTTCACCTCTGGTGATATTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GGCACTCAAAGCATCAATGGGGCCTGGCCAGGCAAGGCAGTTACTCTGATGGTATTTCCATGGCAGGACTaGGGGTGGAGCTGCCCAACA +
Preference number: 5 (lower is better)
Translates to: GTQSINGAWPGKAVTLMVFPWQD*GWSCPT
Trigger: TGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAAA...TACCATCAGAGTAACTGCCTTGCCTGGCCAGGCCCCATTGATGCTTTGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGTTGTCCACAGCGATGTaGGAGGGAGCACAGCACAGG +
Preference number: 5 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLLSTAM*EGAQHR
Trigger: CCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAA...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GTCAAAGTTCCCATGAGCAACAGGTACAGAGTGCTGGCGAGGGTGCAGTCTCTGAGCTCAGGGTGCTTGTaGGAGAGGCTCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: VKVPMSNRYRVLARVQSLSSGCL*ERLCLS
Trigger: GCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCT...CAGAGACTGCACCCTCGCCAGCACTCTGTACCTGTTGCTCATGGGAACTTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp TGGGATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGTGCAGCTGGGCCCTCTaGGCCGGGTCCAGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: WDGKHKLGIQHFNEATVRCSWAL*AGSRAL
Trigger: CAGGGCCCTGGACCCGGCCAAGAGGGCCCAGCTGCA...CCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 90 bp TCTTGCACAGAGCCAGACGCTCCACCAGGTTGTCCACAGCGATGTTaGAGGGAGCACAGCACAGGACCTTTAAGCCTTGCTTCACAGCTT +
Preference number: 5 (lower is better)
Translates to: SCTEPDAPPGCPQRC*REHSTGPLSLASQL
Trigger: AAGCTGTGAAGCAAGGCTTAAAGGTCCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCTGTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GGCCTGATGGCTGCTGGCGGCTTGACTCCCACACACATGCTGACCTCTCCAAGTGACCCCAGTGGCCAGTaGACTGTTTTCATTAGTATC +
Preference number: 5 (lower is better)
Translates to: GLMAAGGLTPTHMLTSPSDPSGQ*TVFISI
Trigger: GATACTAATGAAAACAGTCAACTGGCCACTGGGGTC...ACTTGGAGAGGTCAGCATGTGTGTGGGAGTCAAGCCGCCAGCAGCCATCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp GGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTTTATTTCCACCACAGTaGTGGTTTTCCCAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GPGRTTSHQSPSSRGQAILFPPQ*WFSQCQ
Trigger: CTGGCACTGGGAAAACCACAACTGTGGTGGAAATAA...AATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp CGCATCCCTAGACCACACAATCCATGCCCACTGTGTCACTGCAGAAGACAGGATAGCTCAGGGTGCTTGTaGGAGAGGCTCTGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: RIPRPHNPCPLCHCRRQDSSGCL*ERLCLS
Trigger: GCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCT...ATCCTGTCTTCTGCAGTGACACAGTGGGCATGGATTGTGTGGTCTAGGGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp CAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAAACCCATTGGAGCTGGGGCACTTGGGTTaGGGGACACGGCTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: QSVDTSVLLRRGNTNPLELGHLG*GTRLWP
Trigger: GGGCCACAGCCGTGTCCCCAAACCCAAGTGCCCCAG...CTCCAATGGGTTTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp GACATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTTGAGCATGGTATCTGTGCTGGCCGAGCACTaGGAGAAGCTACAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: DINGRRGPWSCEGLSMVSVLAEH*EKLQVL
Trigger: CAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCAC...AGATACCATGCTCAAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGGACCCCAGTGGCCAGTaGACTGTTTTCATTAGTATC +
Preference number: 5 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQDPSGQ*TVFISI
Trigger: GATACTAATGAAAACAGTCAACTGGCCACTGGGGTC...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp GAGCAGTGTATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGGCCTTGCTTCACAGCTaGAAGGATTATTTCCACCAC +
Preference number: 5 (lower is better)
Translates to: EQCMGPWKDYFPPVTKQQALLHS*KDYFHH
Trigger: GTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGGC...CTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATACACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACGCCTTGCTTCACAGCTaGAAGGATTATTTCCACCAC +
Preference number: 5 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYALLHS*KDYFHH
Trigger: GTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGGC...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp AGATGTGCTGGGCTGGGGAAACAGCTGAGTAGGCAAACCACTTGCCATTCAAACAGACGCTCCACCAGGTaGTCCACAGCGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RCAGLGKQLSRQTTCHSNRRSTR*STAMLE
Trigger: CTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCT...GTTTGAATGGCAAGTGGTTTGCCTACTCAGCTGTTTCCCCAGCCCAGCACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp AACAGACTTAATCTCCAGCTCAGGGTGCTTGTTGGAGAGGCTCTGTCTGAGCAGAGACGCTCCACCAGGTaGTCCACAGCGATGTTGGAG +
Preference number: 5 (lower is better)
Translates to: NRLNLQLRVLVGEALSEQRRSTR*STAMLE
Trigger: CTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCT...CTGCTCAGACAGAGCCTCTCCAACAAGCACCCTGAGCTGGAGATTAAGTCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp TATGGGGCCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGTGCGTCTTTTTGTTCTaGCCAAAGACCTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: YGALEGLLPTSHQAAEARCVFLF*PKTWSM
Trigger: CATAGACCAGGTCTTTGGCAAGAACAAAAAGACGCA...CCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGGCCCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 90 bp AGTTGTGTTGTAGAAAGAGAGTGGGGGTATTTCCATGGCAGGACTTaGGGTGGAGCTGCCCAACAGGATGTCTATGAGGGAGGATGCTGG +
Preference number: 5 (lower is better)
Translates to: SCVVEREWGYFHGRT*GGAAQQDVYEGGCW
Trigger: CCAGCATCCTCCCTCATAGACATCCTGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAAATACCCCCACTCTCTTTCTACAACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 90 bp TTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACAATCTaGGCGTTGTCACTGCGTGCTAGCACTGCATCCAGTGAGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LPKTWSMSLLMSATI*ALSLRASTASSEWC
Trigger: GCACCACTCACTGGATGCAGTGCTAGCACGCAGTGACAACGCCCAGATTGTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp ATCATGCTGAGTGAGGTAACCCAATCACAAAGAACACACACCGTATGCGCTCTCCGCAGAATCCGCTTCTaGCACAGAGCCAGACGCTCC +
Preference number: 5 (lower is better)
Translates to: IMLSEVTQSQRTHTVCALRRIRF*HRARRS
Trigger: GGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGCG...GAGAGCGCATACGGTGTGTGTTCTTTGTGATTGGGTTACCTCACTCAGCATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp CCCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACTTATCCTGCGTCTTTTaGTTCTTGCCAAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: PWKDYFPPVTKQQRPGHYLSCVF*FLPKTW
Trigger: CCAGGTCTTTGGCAAGAACAAAAAGACGCAGGATAA...GTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS-3UTR CAA 90 bp CCTGGAAGGACTACTTCCCACCAGTCACCAAGCAGCAGAGGCCAGGCCATTACACTCTTTCTCTCGGCCTaGAAAGCCATCAACAGACTT +
Preference number: 5 (lower is better)
Translates to: PGRTTSHQSPSSRGQAITLFLSA*KAINRL
Trigger: AAGTCTGTTGATGGCTTTCAAGGCCGAGAGAAAGAG...TGTAATGGCCTGGCCTCTGCTGCTTGGTGACTGGTGGGAAGTAGTCCTTCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS TCA 90 bp TTTCCACCACAGTTGTGGTTTTCCCAGTGCCAGGAGGCCCATGGATaGTGGCAAGTTCTTTCTGGGCCAGTGCAAAGGACACAGCTTCTT +
Preference number: 5 (lower is better)
Translates to: FPPQLWFSQCQEAHG*WQVLSGPVQRTQLL
Trigger: AAGAAGCTGTGTCCTTTGCACTGGCCCAGAAAGAACTTGCCATCATCCATGGGCCTCCTGGCACTGGGAAAACCACAACTGTGGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp CACCACCACCACATCAAAGTAGTCCTCAGGCAGCAGCTTCAGAGGGCCATCAGAGCCTTGCTTCACAGCTaGAAGGATTATTTCCACCAC +
Preference number: 5 (lower is better)
Translates to: HHHHIKVVLRQQLQRAIRALLHS*KDYFHH
Trigger: GTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGGC...TCTGATGGCCCTCTGAAGCTGCTGCCTGAGGACTACTTTGATGTGGTGGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GATGTCATCCAGGTATTCAAAGGCTGTGCGTACCTCCCCATGCTCTGTGAAATATTGTCCACAGCGATGTaGGAGGGAGCACAGCACAGG +
Preference number: 5 (lower is better)
Translates to: DVIQVFKGCAYLPMLCEILSTAM*EGAQHR
Trigger: CCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAA...TATTTCACAGAGCATGGGGAGGTACGCACAGCCTTTGAATACCTGGATGACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp AGAAGGAAGACCAAAGTGTGGATACTTCAGTCCTTCTTAGAAGGGGGAACACAATCGCCCGGATTTCCCTaGGACTGGCTGTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RRKTKVWILQSFLEGGTQSPGFP*DWLSSS
Trigger: GGAGGAGGACAGCCAGTCCAAGGGAAATCCGGGCGA...TTGTGTTCCCCCTTCTAAGAAGGACTGAAGTATCCACACTTTGGTCTTCCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp ATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGGTGGTCCAGGGCCCTGTCCTaGGTCCCACTGCCTGCATAC +
Preference number: 5 (lower is better)
Translates to: MGNTNLESSILTKQQSGWSRALS*VPLPAY
Trigger: GTATGCAGGCAGTGGGACCAAGGACAGGGCCCTGGA...CCACCCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS TCA 90 bp CCTGCGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTaGTGTCAGCAACAATCTGGGCGTTGTCACTGCGTGCTAGCACTG +
Preference number: 5 (lower is better)
Translates to: PASFCSCQRPGLCPF*CQQQSGRCHCVLAL
Trigger: CAGTGCTAGCACGCAGTGACAACGCCCAGATTGTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS TCA 90 bp TTGGAGGGAGCACAGCACAGGACCTTTAAGCCTTGCTTCACAGCTTaGAGGATTATTTCCACCACAGTTGTGGTTTTCCCAGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: LEGAQHRTFKPCFTA*RIISTTVVVFPVPG
Trigger: TCCTGGCACTGGGAAAACCACAACTGTGGTGGAAATAATCCTTCAAGCTGTGAAGCAAGGCTTAAAGGTCCTGTGCTGTGCTCCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp GAGTTGGAGATGAAGCGTGGCTGGATCCAGAGACTCCAGGATAATATCACCAGGTTATCCTGCGTCTTTTaGTTCTTGCCAAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: ELEMKRGWIQRLQDNITRLSCVF*FLPKTW
Trigger: CCAGGTCTTTGGCAAGAACAAAAAGACGCAGGATAA...CCTGGTGATATTATCCTGGAGTCTCTGGATCCAGCCACGCTTCATCTCCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS-3UTR CAA 90 bp CGTCTTTTTGTTCTTGCCAAAGACCTGGTCTATGTCCCTTCTGATGTCAGCAACGACCCCAGTGGCCAGTaGACTGTTTTCATTAGTATC +
Preference number: 5 (lower is better)
Translates to: RLFVLAKDLVYVPSDVSNDPSGQ*TVFISI
Trigger: GATACTAATGAAAACAGTCAACTGGCCACTGGGGTC...GTTGCTGACATCAGAAGGGACATAGACCAGGTCTTTGGCAAGAACAAAAAGACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8
CDS-3UTR CAA 90 bp TGGGATGGGAAACACAAACTTGGAATCCAGCATTTTAACGAAGCAACAGTCAGGTGCGTCTTTTTGTTCTaGCCAAAGACCTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: WDGKHKLGIQHFNEATVRCVFLF*PKTWSM
Trigger: CATAGACCAGGTCTTTGGCAAGAACAAAAAGACGCA...CCTGACTGTTGCTTCGTTAAAATGCTGGATTCCAAGTTTGTGTTTCCCATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 90 bp CTCCTCTGCAGCTGGGCCCTCTTGGCCGGGTCCAGGGCCCTGTCCTaGGTCCCACTGCCTGCATACAGCACTCCTTCCCGGCTAATCCTC +
Preference number: 6 (lower is better)
Translates to: LLCSWALLAGSRALS*VPLPAYSTPSRLIL
Trigger: GAGGATTAGCCGGGAAGGAGTGCTGTATGCAGGCAGTGGGACCAAGGACAGGGCCCTGGACCCGGCCAAGAGGGCCCAGCTGCAGAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS TCA 72 bp GCACCACTGCAGGTCCAAACTTCCTGGGCTCAAAGGTaGCCAGCCGCTGCCCATACAGCCCTGTGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: APLQVQTSWAQR*PAAAHTALCAG
Trigger: GCCAGCGCACAGGGCTGTATGGGCAGCGGCTGGTCACCTTTGAGCCCAGGAAGTTTGGACCTGCAGTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS CCA 72 bp CTGCCTGCATACAGCACTCCTTCCCGGCTAATCCTCTaGCGGGCATGGGCACGAGCCTTTTCTCCACAGCCG +
Preference number: 6 (lower is better)
Translates to: LPAYSTPSRLIL*RAWARAFSPQP
Trigger: CGGCTGTGGAGAAAAGGCTCGTGCCCATGCCCGCCAGAGGATTAGCCGGGAAGGAGTGCTGTATGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 90 bp CCCAGAGTGGTGGTGCTGGCCGAGCACTTGGAGAAGCTACAGGTGTaGTCAGCCTTCACCACAGCAGACACCAGGGCGTCGAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PRVVVLAEHLEKLQV*SAFTTADTRASKSS
Trigger: GGAGGACTTCGACGCCCTGGTGTCTGCTGTGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 72 bp AGCGGTGGCTACAGTGCATGCAGAACTGGCCCAGAGTaGTGGTGCTGGCCGAGCACTTGGAGAAGCTACAGG +
Preference number: 6 (lower is better)
Translates to: SGGYSACRTGPE*WCWPSTWRSYR
Trigger: CCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTAGCCACCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 72 bp GTGGTGCTGGCCGAGCACTTGGAGAAGCTACAGGTGTaGTCAGCCTTCACCACAGCAGACACCAGGGCGTCG +
Preference number: 6 (lower is better)
Translates to: VVLAEHLEKLQV*SAFTTADTRAS
Trigger: CGACGCCCTGGTGTCTGCTGTGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 72 bp ATCCGCTTCTTGCACAGAGCCAGACGCTCCACCAGGTaGTCCACAGCGATGTTGGAGGGAGCACAGCACAGG +
Preference number: 6 (lower is better)
Translates to: IRFLHRARRSTR*STAMLEGAQHR
Trigger: CCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCTGTGCAAGAAGCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS CAA 90 bp CAGTGCATGCAGAACTGGCCCAGAGTGGTGGTGCTGGCCGAGCACTaGGAGAAGCTACAGGTGTTGTCAGCCTTCACCACAGCAGACACC +
Preference number: 6 (lower is better)
Translates to: QCMQNWPRVVVLAEH*EKLQVLSAFTTADT
Trigger: GGTGTCTGCTGTGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 90 bp AGGCGCAGAATCCGCTTCTTGCACAGAGCCAGACGCTCCACCAGGTaGTCCACAGCGATGTTGGAGGGAGCACAGCACAGGACCTTTAAG +
Preference number: 6 (lower is better)
Translates to: RRRIRFLHRARRSTR*STAMLEGAQHRTFK
Trigger: CTTAAAGGTCCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCTGTGCAAGAAGCGGATTCTGCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS GCA 72 bp GGCTACAGTGCATGCAGAACTGGCCCAGAGTGGTGGTaGTGGCCGAGCACTTGGAGAAGCTACAGGTGTTGT +
Preference number: 6 (lower is better)
Translates to: GYSACRTGPEWW*WPSTWRSYRCC
Trigger: ACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CCA 72 bp GAGCCAGACGCTCCACCAGGTTGTCCACAGCGATGTTaGAGGGAGCACAGCACAGGACCTTTAAGCCTTGCT +
Preference number: 6 (lower is better)
Translates to: EPDAPPGCPQRC*REHSTGPLSLA
Trigger: AGCAAGGCTTAAAGGTCCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS CCA 72 bp TACAGCACTCCTTCCCGGCTAATCCTCTGGCGGGCATaGGCACGAGCCTTTTCTCCACAGCCGTGGATTTCA +
Preference number: 6 (lower is better)
Translates to: YSTPSRLILWRA*ARAFSPQPWIS
Trigger: TGAAATCCACGGCTGTGGAGAAAAGGCTCGTGCCCATGCCCGCCAGAGGATTAGCCGGGAAGGAGTGCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 72 bp AGAGCCAGACGCTCCACCAGGTTGTCCACAGCGATGTaGGAGGGAGCACAGCACAGGACCTTTAAGCCTTGC +
Preference number: 6 (lower is better)
Translates to: RARRSTRLSTAM*EGAQHRTFKPC
Trigger: GCAAGGCTTAAAGGTCCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS CAA 72 bp CAGAACTGGCCCAGAGTGGTGGTGCTGGCCGAGCACTaGGAGAAGCTACAGGTGTTGTCAGCCTTCACCACA +
Preference number: 6 (lower is better)
Translates to: QNWPRVVVLAEH*EKLQVLSAFTT
Trigger: TGTGGTGAAGGCTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS TCA 72 bp CAGGACTTGGGGTGGAGCTGCCCAACAGGATGTCTATaGGGGAGGATGCTGGCCCAGAGTGGTACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: QDLGWSCPTGCL*GRMLAQSGTSS
Trigger: TGAAGAAGTACCACTCTGGGCCAGCATCCTCCCTCATAGACATCCTGTTGGGCAGCTCCACCCCAAGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 72 bp TACAGTGCATGCAGAACTGGCCCAGAGTGGTGGTGCTaGCCGAGCACTTGGAGAAGCTACAGGTGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: YSACRTGPEWWC*PSTWRSYRCCQ
Trigger: CTGACAACACCTGTAGCTTCTCCAAGTGCTCGGCCAGCACCACCACTCTGGGCCAGTTCTGCATGCACTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS CAA 90 bp TTCTTGCACAGAGCCAGACGCTCCACCAGGTTGTCCACAGCGATGTaGGAGGGAGCACAGCACAGGACCTTTAAGCCTTGCTTCACAGCT +
Preference number: 6 (lower is better)
Translates to: FLHRARRSTRLSTAM*EGAQHRTFKPCFTA
Trigger: AGCTGTGAAGCAAGGCTTAAAGGTCCTGTGCTGTGCTCCCTCCAACATCGCTGTGGACAACCTGGTGGAGCGTCTGGCTCTGTGCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
ENSMUST00000154537.8
CDS TCA 72 bp TTTCTCCACAGCCGTGGATTTCAGGCAGATGGTGGCTaGGGCAGTAGCGGTGGCTACAGTGCATGCAGAACT +
Preference number: 6 (lower is better)
Translates to: FLHSRGFQADGG*GSSGGYSACRT
Trigger: AGTTCTGCATGCACTGTAGCCACCGCTACTGCCTCAGCCACCATCTGCCTGAAATCCACGGCTGTGGAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025751.11
CDS GCA 72 bp GGTGGAGCTGCCCAACAGGATGTCTATGAGGGAGGATaGTGGCCCAGAGTGGTACTTCTTCAGTGTCATCAG +
Preference number: 6 (lower is better)
Translates to: GGAAQQDVYEGG*WPRVVLLQCHQ
Trigger: CTGATGACACTGAAGAAGTACCACTCTGGGCCAGCATCCTCCCTCATAGACATCCTGTTGGGCAGCTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 72 bp GGAGCTGCCCAACAGGATGTCTATGAGGGAGGATGCTaGCCCAGAGTGGTACTTCTTCAGTGTCATCAGTGC +
Preference number: 6 (lower is better)
Translates to: GAAQQDVYEGGC*PRVVLLQCHQC
Trigger: GCACTGATGACACTGAAGAAGTACCACTCTGGGCCAGCATCCTCCCTCATAGACATCCTGTTGGGCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 72 bp GTAGAAAGAGAGTGGGGGTATTTCCATGGCAGGACTTaGGGTGGAGCTGCCCAACAGGATGTCTATGAGGGA +
Preference number: 6 (lower is better)
Translates to: VEREWGYFHGRT*GGAAQQDVYEG
Trigger: TCCCTCATAGACATCCTGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAAATACCCCCACTCTCTTTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CCA 72 bp GAGTTGTGTTGTAGAAAGAGAGTGGGGGTATTTCCATaGCAGGACTTGGGGTGGAGCTGCCCAACAGGATGT +
Preference number: 6 (lower is better)
Translates to: ELCCRKRVGVFP*QDLGWSCPTGC
Trigger: ACATCCTGTTGGGCAGCTCCACCCCAAGTCCTGCCATGGAAATACCCCCACTCTCTTTCTACAACACAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CAA 72 bp TCTATGTCCCTTCTGATGTCAGCAACAATCTGGGCGTaGTCACTGCGTGCTAGCACTGCATCCAGTGAGTGG +
Preference number: 6 (lower is better)
Translates to: SMSLLMSATIWA*SLRASTASSEW
Trigger: CCACTCACTGGATGCAGTGCTAGCACGCAGTGACAACGCCCAGATTGTTGCTGACATCAGAAGGGACATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS CAA 90 bp GGGCCAGTGCAAAGGACACAGCTTCTTTCTGGGAAAGGTCCAGAGTaGTGTTGTAGAAAGAGAGTGGGGGTATTTCCATGGCAGGACTTG +
Preference number: 6 (lower is better)
Translates to: GPVQRTQLLSGKGPE*CCRKRVGVFPWQDL
Trigger: CAAGTCCTGCCATGGAAATACCCCCACTCTCTTTCTACAACACAACTCTGGACCTTTCCCAGAAAGAAGCTGTGTCCTTTGCACTGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025751.11
ENSMUST00000119292.8
CDS TCA 72 bp GTAGAAAGAGAGTGGGGTTTTTCAGGCGTTTGTAGGTaGCATCGTTGGCAAGCTTCAGCAGTCTGTAGGTAT +
Preference number: 6 (lower is better)
Translates to: VEREWGFSGVCR*HRWQASAVCRY
Trigger: ATACCTACAGACTGCTGAAGCTTGCCAACGATGTCACCTACAAACGCCTGAAAAACCCCACTCTCTTTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000154537.8