Pregenerated sensors for IGHM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076617Ensembl transcript IDs: ENSMUST00000103426.3, ENSMUST00000177715.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCTCAGCTGTCTGTGGGCCAGACATTGCTTCAGATTGTACAAGTTaGCAAAAAGTCTTTGGTCAGTCTAGAAAGAAGACCATCTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSAVCGPDIASDCTS*QKVFGQSRKKTISE Trigger: CTCTGAGATGGTCTTCTTTCTAGACTGACCAAAGACTTTTTGTCAACTTGTACAATCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR CCA 90 bp | AAGTATTTATTTCCATGTGACATTTGTTTACAGCTCAGCTGTCTGTaGGCCAGACATTGCTTCAGATTGTACAAGTTGACAAAAAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: KYLFPCDICLQLSCL*ARHCFRLYKLTKSL Trigger: AAGACTTTTTGTCAACTTGTACAATCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGGAAATAAATACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCGGATCTCTTGGTCTCTaGTGTCCTTCCATGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: QERRKNKFTSHTVRYPRPGSLGL*CPSMLR Trigger: TCTCAGCATGGAAGGACAGCAGAGACCAAGAGATCC...GGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR-3UTR CCA 90 bp | AGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTTGTGGGAGGATCTCTTaGTCTCTGCTGTCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: RRKNKFTSHTVRYPRPRGCGRIS*SLLSFH Trigger: ATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACA...ACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR CCA 72 bp | CAGTCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTaGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGC | + |
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Preference number: 3 (lower is better) Translates to: QSGIPGPEVVSL*EDLLVSAVLPC Trigger: GCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR CCA 72 bp | TTTCCATGTGACATTTGTTTACAGCTCAGCTGTCTGTaGGCCAGACATTGCTTCAGATTGTACAAGTTGACA | + |
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Preference number: 3 (lower is better) Translates to: FPCDICLQLSCL*ARHCFRLYKLT Trigger: TGTCAACTTGTACAATCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| 3UTR GCA 72 bp | ATTTGTTTACAGCTCAGCTGTCTGTGGGCCAGACATTaGTTCAGATTGTACAAGTTGACAAAAAGTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: ICLQLSCLWARH*FRLYKLTKSLW Trigger: CCAAAGACTTTTTGTCAACTTGTACAATCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCCTCGGTCACCAGGTGTaGCAGGGCCTCGTGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERLGHQV*QGLVAY Trigger: GTAGGCCACGAGGCCCTGCCACACCTGGTGACCGAG...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGGCAACACCTGCGAGGTaGCTAGGTACTTGCCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: CIHRATGHPGPAWLSASMATPAR*LGTCPL Trigger: CAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGC...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | ACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGACTCGGTCACCAGGTGTaGCAGGGCCTCGTGGCCTAC | + |
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Preference number: 4 (lower is better) Translates to: TSHTVRYPRPRGSVPVGGLGHQV*QGLVAY Trigger: GTAGGCCACGAGGCCCTGCCACACCTGGTGACCGAG...TCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGACTGTATGACTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGGCAGGTGACTGTGGCTaGCTCCCTCAGGTTCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: CIHRATGHPGPAWLSASMAGDCG*LPQVQL Trigger: CAACTGAACCTGAGGGAGTCAGCCACAGTCACCTGC...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | TCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTCCTTCACCAGGCAGGTaGCTGTGGCTGACTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SGIPGPEVVSLWEDLLVSPSPGR*LWLTPS Trigger: TGAGGGAGTCAGCCACAGTCACCTGCCTGGTGAAGG...AGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | CCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTATTGGGGTTCATCTCTaGGACAGCTGGAATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PRPRGSVPVGGSLGLCCPIGVHL*DSWNGH Trigger: GTGCCCATTCCAGCTGTCGCAGAGATGAACCCCAAT...AGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | AGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGCTGGCAACACCTGCGAGGTaGCTAGGTACTTGCCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RGSVPVGGSLGLCCPSMLATPAR*LGTCPL Trigger: CAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGC...CAGCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTTGCTCACGAGCTGGTaGCAGCAGGTACACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERLLTSW*QQVHSR Trigger: CCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCAA...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCGGTAAAGTAGAAGCCTaGGGCCCCAGGCTCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERGKVEA*GPRLWH Trigger: ATGCCAGAGCCTGGGGCCCCAGGCTTCTACTTTACC...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTTCACCTCCCCCTCAGTaGACTTGTCCACGGTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SGIPGPEVVSLWEDLLVSSPPPQ*TCPRSS Trigger: AGAGGACCGTGGACAAGTCCACTGAGGGGGAGGTGA...AGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGTCTGGTAGTTCCAGGTaGAGGAAATGGTGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CIHRATGHPGPAWLSASMSGSSR*RKWCWA Trigger: TGCCCAGCACCATTTCCTTCACCTGGAACTACCAGA...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | AGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGCTGAAGGTGAGACCCCTGTaGTCCACACGGCAGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: RGSVPVGGSLGLCCPSMLKVRPL*STRQVY Trigger: GTACACCTGCCGTGTGGATCACAGGGGTCTCACCTT...CAGCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | TCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTAGGTGGCTAGGTACTTaGCCCCTGTCCTCAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SGIPGPEVVSLWEDLLVSRWLGT*PLSSVL Trigger: CAACACTGAGGACAGGGGGCAAGTACCTAGCCACCT...AGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGAGGTTAGGATGTCTGTaGAGGGACTGGCAGCACATG | + |
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Preference number: 4 (lower is better) Translates to: CIHRATGHPGPAWLSASMRLGCL*RDWQHM Trigger: CATGTGCTGCCAGTCCCTCCACAGACATCCTAACCT...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | AGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGCTGTTGCTCACGAGCTGGTaGCAGCAGGTACACAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGSVPVGGSLGLCCPSMLLLTSW*QQVHSR Trigger: CCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCAA...CAGCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | ACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAAGGTGAGACCCCTGTaGTCCACACGGCAGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: TWLVCIHRATGHPGPAWLKVRPL*STRQVY Trigger: GTACACCTGCCGTGTGGATCACAGGGGTCTCACCTT...CAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCATTGGGGTTCATCTCTaGGACAGCTGGAATGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERIGVHL*DSWNGH Trigger: GTGCCCATTCCAGCTGTCGCAGAGATGAACCCCAAT...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | ATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGTGTCTGTGGAGGGACTaGCAGCACATGTGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: IQSGIPGPEVVSLWEDLLCLWRD*QHMWRT Trigger: TGTCCTCCACATGTGCTGCCAGTCCCTCCACAGACA...CAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGACTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | ACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGGTGGCTAGGTACTTaGCCCCTGTCCTCAGTGTTG | + |
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Preference number: 4 (lower is better) Translates to: TWLVCIHRATGHPGPAWLRWLGT*PLSSVL Trigger: CAACACTGAGGACAGGGGGCAAGTACCTAGCCACCT...CAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | ACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGTGTCTGTGGAGGGACTaGCAGCACATGTGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: TWLVCIHRATGHPGPAWLCLWRD*QHMWRT Trigger: TGTCCTCCACATGTGCTGCCAGTCCCTCCACAGACA...CAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | GACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTCTGCACACTGATGTCTaGAGGAGAGAAGCCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: DMVSLHTQSNWTPRACLVLHTDV*RREALH Trigger: GTGAAGGGCTTCTCTCCTGCAGACATCAGTGTGCAG...AACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGCACCTCATTGGGTTTTaGGATGAATTTCTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CIHRATGHPGPAWLSASMHLIGF*DEFLLW Trigger: CCACAGAAGAAATTCATCTCAAAACCCAATGAGGTG...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | TTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTCTGAACCTTCAAGGATaGTCTTGGGAGACAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: LVCIHRATGHPGPAWLSALNLQG*SWETAT Trigger: TGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAG...AGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | AGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGCTGCTGAACCTTCAAGGATaGTCTTGGGAGACAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: RGSVPVGGSLGLCCPSMLLNLQG*SWETAT Trigger: TGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAG...CAGCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCCATCTCTGCGACAGCTaGAATGGGCACATGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: SHSDMVSLHTQSNWTPRAHLCDS*NGHMQI Trigger: GATCTGCATGTGCCCATTCCAGCTGTCGCAGAGATG...GGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCCGAACACATTTACATTaGGGTTCATCTCTGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERRTHLH*GSSLRQ Trigger: CTGTCGCAGAGATGAACCCCAATGTAAATGTGTTCG...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | CCATGTGACATTTGTTTACAGCTCAGCTGTCTGTGGGCCAGACATTGCTTCAGAGGTAAAGTAGAAGCCTaGGGCCCCAGGCTCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: PCDICLQLSCLWARHCFRGKVEA*GPRLWH Trigger: ATGCCAGAGCCTGGGGCCCCAGGCTTCTACTTTACC...TCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | ACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGGAATTTCTTCTGTGGTaGAGGCAGATCCCTGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: TWLVCIHRATGHPGPAWLEFLLW*RQIPVS Trigger: ACTCACAGGGATCTGCCTTCACCACAGAAGAAATTC...CAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | AGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTGGAGGAAGAGGACGATaGAGGTGGAGGCAGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RRKNKFTSHTVRYPRPRGGGRGR*RWRQWS Trigger: GGACCACTGCCTCCACCTTCATCGTCCTCTTCCTCC...ACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCCTCCGTAGTGGATTTTaGATACCAGGTATTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: VSLHTQSNWTPRACLVERLRSGF*IPGIHL Trigger: CAGATGAATACCTGGTATGCAAAATCCACTACGGAG...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | TCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCAGATCTTTGTTTTTaGCTCCGTAGTGGATTTTGC | + |
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Preference number: 4 (lower is better) Translates to: SGIPGPEVVSLWEDLLVSADLCF*LRSGFC Trigger: GCAAAATCCACTACGGAGGCAAAAACAAAGATCTGC...AGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | GACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTTACTGTGATCGGTTTTaGAGTGAAGTTCGTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: DMVSLHTQSNWTPRACLVYCDRF*SEVRGL Trigger: GAGGCCACGAACTTCACTCCAAAACCGATCACAGTA...AACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCGTCACATACTTCTCTTaGGGCAAGAGTTGCCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SHSDMVSLHTQSNWTPRAVTYFS*GKSCPL Trigger: GAGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGAC...GGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | TCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTCATTGGGTTTTGAGATaGATTTCTTCTGTGGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SGIPGPEVVSLWEDLLVSHWVLR*ISSVVK Trigger: CTTCACCACAGAAGAAATTCATCTCAAAACCCAATG...AGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | GTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGGCAGGTGACTGTGGCTaGCTCCCTCAGGTTCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: VRISLLVIQSGIPGPEVVAGDCG*LPQVQL Trigger: CAACTGAACCTGAGGGAGTCAGCCACAGTCACCTGC...CACTACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | AATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCTTCACCAGGCAGGTaGCTGTGGCTGACTCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: NATSHSDMVSLHTQSNWTPSPGR*LWLTPS Trigger: TGAGGGAGTCAGCCACAGTCACCTGCCTGGTGAAGG...TGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | GCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCTTTAGACTTGCGTGGTaGAGGGCCAGAGAAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: ATSHSDMVSLHTQSNWTPFRLAW*RAREAI Trigger: GATGGCTTCTCTGGCCCTGCACCACGCAAGTCTAAA...GGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | CCATGTGACATTTGTTTACAGCTCAGCTGTCTGTGGGCCAGACATTGCTTCAGACTGCACACTGATGTCTaGAGGAGAGAAGCCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: PCDICLQLSCLWARHCFRLHTDV*RREALH Trigger: GTGAAGGGCTTCTCTCCTGCAGACATCAGTGTGCAG...TCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | GACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTAGACATTGTACAGTGTaGGTTTACCAGTGGACTTGT | + |
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Preference number: 4 (lower is better) Translates to: DMVSLHTQSNWTPRACLVRHCTV*VYQWTC Trigger: ACAAGTCCACTGGTAAACCCACACTGTACAATGTCT...AACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | AGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTTTTAGACTTGCGTGGTaGAGGGCCAGAGAAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RRKNKFTSHTVRYPRPRGFRLAW*RAREAI Trigger: GATGGCTTCTCTGGCCCTGCACCACGCAAGTCTAAA...ACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | TTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAAGGTGCCATTGGGATaGCTTTCCATGATTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: LVCIHRATGHPGPAWLSAKVPLG*LSMILI Trigger: AATTAAAATCATGGAAAGCCATCCCAATGGCACCTT...AGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | AAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGTCTGGTAGTTCCAGGTaGAGGAAATGGTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDVRISLLVIQSGIPGPESGSSR*RKWCWA Trigger: TGCCCAGCACCATTTCCTTCACCTGGAACTACCAGA...CTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCCATTGGGTTTTGAGATaGATTTCTTCTGTGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SHSDMVSLHTQSNWTPRAHWVLR*ISSVVK Trigger: CTTCACCACAGAAGAAATTCATCTCAAAACCCAATG...GGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | AAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGAGGTTAGGATGTCTGTaGAGGGACTGGCAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: KDVRISLLVIQSGIPGPERLGCL*RDWQHM Trigger: CATGTGCTGCCAGTCCCTCCACAGACATCCTAACCT...CTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | TCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCAATTTTGGTTTCCAGTaGTTCACCACTTTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSDMVSLHTQSNWTPRANFGFQ*FTTLRS Trigger: GCTTCTCAAAGTGGTGAACCACTGGAAACCAAAATT...GGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GCAACACAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCCTGGCATCGGGGCACTaGTCACATACTTCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQERRKNKFTSHTVRYPLASGH*SHTSLG Trigger: CCCAAGAGAAGTATGTGACCAGTGCCCCGATGCCAG...GGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTGTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | GCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCGCAGATCTTTGTTTTTaGCTCCGTAGTGGATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATSHSDMVSLHTQSNWTPADLCF*LRSGFC Trigger: GCAAAATCCACTACGGAGGCAAAAACAAAGATCTGC...GGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GCAACACAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCCCCTGTCCTCAGTGTTaGGAAGGTTCTGATACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATQERRKNKFTSHTVRYPPCPQC*EGSDTL Trigger: CAGGGTATCAGAACCTTCCCAACACTGAGGACAGGG...GGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTGTGTTGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | GTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGTACTGTGATCGGTTTTaGAGTGAAGTTCGTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRISLLVIQSGIPGPEVVYCDRF*SEVRGL Trigger: GAGGCCACGAACTTCACTCCAAAACCGATCACAGTA...CACTACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | AAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTCACATACTTCTCTTaGGGCAAGAGTTGCCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDVRISLLVIQSGIPGPEVTYFS*GKSCPL Trigger: GAGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGAC...CTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | AAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGAATAGGTTGCCAGGTTTaGGACCAGACAGGTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMQHLTLTWLVCIHRATGIGCQV*DQTGQV Trigger: AACCTGACCTGTCTGGTCTCAAACCTGGCAACCTAT...TCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR TCA 90 bp | AAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGAGTGGTTCACCACTTTaGGAAGCCCAGGAGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: KDVRISLLVIQSGIPGPESGSPL*EAQEIF Trigger: GAATATCTCCTGGGCTTCTCAAAGTGGTGAACCACT...CTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | AAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGAATTTCTTCTGTGGTaGAGGCAGATCCCTGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDVRISLLVIQSGIPGPEEFLLW*RQIPVS Trigger: ACTCACAGGGATCTGCCTTCACCACAGAAGAAATTC...CTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | AAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACGCCTGTGTCAGACATaGTCAGGGAGACATTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KMQHLTLTWLVCIHRATGRLCQT*SGRHCT Trigger: TGTACAATGTCTCCCTGATCATGTCTGACACAGGCG...TCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TATAAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTCTGGCATCGGGGCACTaGTCACATACTTCTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YKMQHLTLTWLVCIHRATLASGH*SHTSLG Trigger: CCCAAGAGAAGTATGTGACCAGTGCCCCGATGCCAG...AGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TATAAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTCCCTGTCCTCAGTGTTaGGAAGGTTCTGATACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YKMQHLTLTWLVCIHRATPCPQC*EGSDTL Trigger: CAGGGTATCAGAACCTTCCCAACACTGAGGACAGGG...AGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | TATAAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGTGTGGGTTTACCAGTaGACTTGTCCACGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YKMQHLTLTWLVCIHRATVWVYQ*TCPRSS Trigger: AGAGGACCGTGGACAAGTCCACTGGTAAACCCACAC...AGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR GCA 90 bp | AAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGAGCTGGAATGGGCACATaGAGATCTTTGTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMQHLTLTWLVCIHRATGAGMGT*RSLFLP Trigger: AGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGC...TCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GCAACACAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCCGAACACATTTACATTaGGGTTCATCTCTGCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: ATQERRKNKFTSHTVRYPRTHLH*GSSLRQ Trigger: CTGTCGCAGAGATGAACCCCAATGTAAATGTGTTCG...GGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTGTGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAATTTTGGTTTCCAGTaGTTCACCACTTTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QERRKNKFTSHTVRYPRPNFGFQ*FTTLRS Trigger: GCTTCTCAAAGTGGTGAACCACTGGAAACCAAAATT...GGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | TATAAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTAGTGGTTCACCACTTTaGGAAGCCCAGGAGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: YKMQHLTLTWLVCIHRATSGSPL*EAQEIF Trigger: GAATATCTCCTGGGCTTCTCAAAGTGGTGAACCACT...AGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CCA 90 bp | GTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGAAGGTGCCATTGGGATaGCTTTCCATGATTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VRISLLVIQSGIPGPEVVKVPLG*LSMILI Trigger: AATTAAAATCATGGAAAGCCATCCCAATGGCACCTT...CACTACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR GCA 90 bp | ATTGTACAAGTTGACAAAAAGTCTTTGGTCAGTCTAGAAAGAAGACCATCTCAGGCTGGAATGGGCACATaGAGATCTTTGTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IVQVDKKSLVSLERRPSQAGMGT*RSLFLP Trigger: AGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGC...CTGAGATGGTCTTCTTTCTAGACTGACCAAAGACTTTTTGTCAACTTGTACAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR TCA 90 bp | ATTGTACAAGTTGACAAAAAGTCTTTGGTCAGTCTAGAAAGAAGACCATCTCAGCACCTCATTGGGTTTTaGGATGAATTTCTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: IVQVDKKSLVSLERRPSQHLIGF*DEFLLW Trigger: CCACAGAAGAAATTCATCTCAAAACCCAATGAGGTG...CTGAGATGGTCTTCTTTCTAGACTGACCAAAGACTTTTTGTCAACTTGTACAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS CCA 90 bp | CTCCCCCTCAGTGGACTTGTCCACGGTCCTCTCGGTCACCAGGTGTaGCAGGGCCTCGTGGCCTACAACACAGGTATAGGTCTCTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: LPLSGLVHGPLGHQV*QGLVAYNTGIGLSG Trigger: TCCGGAGAGACCTATACCTGTGTTGTAGGCCACGAGGCCCTGCCACACCTGGTGACCGAGAGGACCGTGGACAAGTCCACTGAGGGGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS CCA 90 bp | GGGTTTACCAGTGGACTTGTCCACGGTCCTCTCGGTCACCAGGTGTaGCAGGGCCTCGTGGCCTACAACACAGGTATAGGTCTCTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: GFTSGLVHGPLGHQV*QGLVAYNTGIGLSG Trigger: TCCGGAGAGACCTATACCTGTGTTGTAGGCCACGAGGCCCTGCCACACCTGGTGACCGAGAGGACCGTGGACAAGTCCACTGGTAAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS TCA 90 bp | GATGTCTGCAGGAGAGAAGCCCTTCACCAGGCAGGTGACTGTGGCTaGCTCCCTCAGGTTCAGTTGCTCACGAGCTGGTGGCAGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: DVCRREALHQAGDCG*LPQVQLLTSWWQQV Trigger: TACCTGCTGCCACCAGCTCGTGAGCAACTGAACCTGAGGGAGTCAGCCACAGTCACCTGCCTGGTGAAGGGCTTCTCTCCTGCAGACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS GCA 90 bp | CCCTTCACCAGGCAGGTGACTGTGGCTGACTCCCTCAGGTTCAGTTaGTCACGAGCTGGTGGCAGCAGGTACACAGCAGGTGGATGTTTG | + |
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Preference number: 5 (lower is better) Translates to: PFTRQVTVADSLRFS*SRAGGSRYTAGGCL Trigger: CAAACATCCACCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCAACTGAACCTGAGGGAGTCAGCCACAGTCACCTGCCTGGTGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CCA 90 bp | TTCCTCCTCTGTCACAGTCAGGATGCTGTGGGTAAAGTAGAAGCCTaGGGCCCCAGGCTCTGGCATCGGGGCACTGGTCACATACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLCHSQDAVGKVEA*GPRLWHRGTGHILL Trigger: GAGAAGTATGTGACCAGTGCCCCGATGCCAGAGCCTGGGGCCCCAGGCTTCTACTTTACCCACAGCATCCTGACTGTGACAGAGGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCGGTTTACCAGTGGACTaGTCCACGGTCCTCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VSLHTQSNWTPRACLVERGLPVD*STVLSV Trigger: GACCGAGAGGACCGTGGACAAGTCCACTGGTAAACC...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS TCA 90 bp | GGGGCACTGGTCACATACTTCTCTTGGGGCAAGAGTTGCCCTCTCTaGAGCCACTGCACACTGATGTCTGCAGGAGAGAAGCCCTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GALVTYFSWGKSCPL*SHCTLMSAGEKPFT Trigger: GGTGAAGGGCTTCTCTCCTGCAGACATCAGTGTGCAGTGGCTTCAGAGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGACCAGTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | ACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGCTCCCTCAGGTTCAGTaGCTCACGAGCTGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TWLVCIHRATGHPGPAWLLPQVQ*LTSWWQ Trigger: CTGCCACCAGCTCGTGAGCAACTGAACCTGAGGGAG...CAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CAA 90 bp | GGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTTCCATGCTGAGACTCTTGGGGCAAGAGTaGCCCTCTCTGAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSVPVGGSLGLCCPSMLRLLGQE*PSLKPL Trigger: CAGTGGCTTCAGAGAGGGCAACTCTTGCCCCAAGAG...TCTCAGCATGGAAGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS GCA 90 bp | TGGAGTGAAGTTCGTGGCCTCGCAGATGAGTTTAGACTTGCGTGGTaGAGGGCCAGAGAAGCCATCCCGTGGTGGGACGAACACATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WSEVRGLADEFRLAW*RAREAIPWWDEHIY Trigger: GTAAATGTGTTCGTCCCACCACGGGATGGCTTCTCTGGCCCTGCACCACGCAAGTCTAAACTCATCTGCGAGGCCACGAACTTCACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGTCTCTGCTGTCCTCAGTGGTTCACCACTTaGAGAAGCCCAGGAGATATT | + |
|
Preference number: 5 (lower is better) Translates to: PRPRGSVPVGGSLGLCCPQWFTT*RSPGDI Trigger: AATATCTCCTGGGCTTCTCAAAGTGGTGAACCACTG...AGGACAGCAGAGACCAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS TCA 90 bp | TGGAGGGACTGGCAGCACATGTGGAGGACACGTTCTTCAAGAAGGTaGGACCCCTGTGATCCACACGGCAGGTGTACACATTCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: WRDWQHMWRTRSSRR*DPCDPHGRCTHSGS Trigger: TGAACCTGAATGTGTACACCTGCCGTGTGGATCACAGGGGTCTCACCTTCTTGAAGAACGTGTCCTCCACATGTGCTGCCAGTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | CACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCCTTCAAGGATGCTCTaGGGAGACAGCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSDMVSLHTQSNWTPRACPSRML*GDSNTC Trigger: GCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGG...GCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS-3UTR CAA 90 bp | TGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCTAGCATGCAGTGGTTCACCACTTaGAGAAGCCCAGGAGATATT | + |
|
Preference number: 5 (lower is better) Translates to: CIHRATGHPGPAWLSASMQWFTT*RSPGDI Trigger: AATATCTCCTGGGCTTCTCAAAGTGGTGAACCACTG...CATGCTAGCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS GCA 90 bp | TATTCATCTGAACCTTCAAGGATGCTCTTGGGAGACAGCAACACCTaGGAGGTGGCTAGGTACTTGCCCCCTGTCCTCAGTGTTGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: YSSEPSRMLLGDSNT*EVARYLPPVLSVGK Trigger: CTTCCCAACACTGAGGACAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | ATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGTCCCTGTGGGAGGATCTCTTGGCACTGAAGGTGCCATaGGGATGGCTTTCCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: IQSGIPGPEVVSLWEDLLALKVP*GWLSMI Trigger: AATCATGGAAAGCCATCCCAATGGCACCTTCAGTGC...CAAGAGATCCTCCCACAGGGACACTACCTCTGGGCCTGGGATACCTGACTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCACAGCAGGTGGATGTTaGTGCACCTCATTGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VSLHTQSNWTPRACLVERTAGGC*CTSLGF Trigger: AAAACCCAATGAGGTGCACAAACATCCACCTGCTGT...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS CCA 90 bp | GGATTTTGCATACCAGGTATTCATCTGAACCTTCAAGGATGCTCTTaGGAGACAGCAACACCTGCGAGGTGGCTAGGTACTTGCCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GFCIPGIHLNLQGCS*ETATPARWLGTCPL Trigger: CAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATACCTGGTATGCAAAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS-3UTR CAA 90 bp | GTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTGAGCGCACGAACACATTTACATaGGGGTTCATCTCTGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: VSLHTQSNWTPRACLVERTNTFT*GFISAT Trigger: TGTCGCAGAGATGAACCCCAATGTAAATGTGTTCGT...GCGCTCAACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
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| CDS GCA 90 bp | TGCTCACGAGCTGGTGGCAGCAGGTACACAGCAGGTGGATGTTTGTaGACCTCATTGGGTTTTGAGATGAATTTCTTCTGTGGTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSRAGGSRYTAGGCL*TSLGFEMNFFCGEG Trigger: GCCTTCACCACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTGACATTTGTTTACAGCTCAGCTGTCTGTGGGCCAGACATTGCTTCAGACCTTCAAGGATGCTCTaGGGAGACAGCAACACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PCDICLQLSCLWARHCFRPSRML*GDSNTC Trigger: GCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGG...TCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS TCA 90 bp | TTGAGAAGCCCAGGAGATATTCAGGGTTTCATAGGTTGCCAGGTTTaGGACCAGACAGGTCAGGTTAGCGGACTTGCTGAGGAAGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRSPGDIQGFIGCQV*DQTGQVSGLAEEDV Trigger: GACATCTTCCTCAGCAAGTCCGCTAACCTGACCTGTCTGGTCTCAAACCTGGCAACCTATGAAACCCTGAATATCTCCTGGGCTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS GCA 90 bp | CGTAGTGGATTTTGCATACCAGGTATTCATCTGAACCTTCAAGGATaGTCTTGGGAGACAGCAACACCTGCGAGGTGGCTAGGTACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSGFCIPGIHLNLQG*SWETATPARWLGTC Trigger: GCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATACCTGGTATGCAAAATCCACTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCGAGGTGGCTAGGTACTaGCCCCCTGTCCTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QERRKNKFTSHTVRYPRPEVARY*PPVLSV Trigger: AACACTGAGGACAGGGGGCAAGTACCTAGCCACCTC...GGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTGACATTTGTTTACAGCTCAGCTGTCTGTGGGCCAGACATTGCTTCAGAGGTCACATACTTCTCTaGGGGCAAGAGTTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PCDICLQLSCLWARHCFRGHILL*GQELPS Trigger: AGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGACC...TCTGAAGCAATGTCTGGCCCACAGACAGCTGAGCTGTAAACAAATGTCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | GACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTGCCTGGTTATGATCAGGGAGACATaGTACAGTGTGGGTTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: DMVSLHTQSNWTPRACLVMIRET*YSVGLP Trigger: TGGTAAACCCACACTGTACAATGTCTCCCTGATCAT...AACCAGGCAGGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS-3UTR CAA 90 bp | ACACAGGAAAGACGTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGTCCCCCTCAGTGGACTaGTCCACGGTCCTCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQERRKNKFTSHTVRYPRSPSVD*STVLSV Trigger: GACCGAGAGGACCGTGGACAAGTCCACTGAGGGGGA...CCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTACGTCTTTCCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | AATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACAGAGGTGGCTAGGTACTaGCCCCCTGTCCTCAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NATSHSDMVSLHTQSNWTEVARY*PPVLSV Trigger: AACACTGAGGACAGGGGGCAAGTACCTAGCCACCTC...TGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS-3UTR CAA 90 bp | ATTGTACAAGTTGACAAAAAGTCTTTGGTCAGTCTAGAAAGAAGACCATCTCAGCTCCCTCAGGTTCAGTaGCTCACGAGCTGGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IVQVDKKSLVSLERRPSQLPQVQ*LTSWWQ Trigger: CTGCCACCAGCTCGTGAGCAACTGAACCTGAGGGAG...CTGAGATGGTCTTCTTTCTAGACTGACCAAAGACTTTTTGTCAACTTGTACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | AATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACAGGTCACATACTTCTCTaGGGGCAAGAGTTGCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NATSHSDMVSLHTQSNWTGHILL*GQELPS Trigger: AGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGACC...TGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS GCA 90 bp | TCATCTCTGCGACAGCTGGAATGGGCACATGCAGATCTTTGTTTTTaGCTCCGTAGTGGATTTTGCATACCAGGTATTCATCTGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLRQLEWAHADLCF*LRSGFCIPGIHLNL Trigger: AAGGTTCAGATGAATACCTGGTATGCAAAATCCACTACGGAGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGCTGTCGCAGAGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACACCCAGGGCCTCCATGATTTTAATTTaGGTTTCCAGTGGTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSDMVSLHTQSNWTPRASMILI*VSSGSP Trigger: TGGTGAACCACTGGAAACCAAAATTAAAATCATGGA...GGCCCTGGGTGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS-3UTR CAA 90 bp | AATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTGGACAGCACTGAAGGTGCCATaGGGATGGCTTTCCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: NATSHSDMVSLHTQSNWTALKVP*GWLSMI Trigger: AATCATGGAAAGCCATCCCAATGGCACCTTCAGTGC...TGTCCAGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS-3UTR CAA 90 bp | TATAAAATGCAACATCTCACTCTGACATGGTTAGTTTGCATACACAGAGCAACTCTCTTGGGGCAAGAGTaGCCCTCTCTGAAGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: YKMQHLTLTWLVCIHRATLLGQE*PSLKPL Trigger: CAGTGGCTTCAGAGAGGGCAACTCTTGCCCCAAGAG...AGTTGCTCTGTGTATGCAAACTAACCATGTCAGAGTGAGATGTTGCATTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS CCA 90 bp | ACACAAACACTAGCCACACCCTTAGCACTGAAGGTGCCATTGGGATaGCTTTCCATGATTTTAATTTTGGTTTCCAGTGGTTCACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TQTLATPLALKVPLG*LSMILILVSSGSPL Trigger: AAGTGGTGAACCACTGGAAACCAAAATTAAAATCATGGAAAGCCATCCCAATGGCACCTTCAGTGCTAAGGGTGTGGCTAGTGTTTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS TCA 90 bp | TTGGGTTTTGAGATGAATTTCTTCTGTGGTGAAGGCAGATCCCTGTaGGTCACAGTACACACAAATTCCTTCCTGTTATTCCAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGFEMNFFCGEGRSL*VTVHTNSFLLFQSS Trigger: GGAAGACTGGAATAACAGGAAGGAATTTGTGTGTACTGTGACTCACAGGGATCTGCCTTCACCACAGAAGAAATTCATCTCAAAACCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGAATAAGTTTACTAGTCATACAGTCAGGTATCCCAGGCCCAGAGGTAGTGTCCATGATTTTAATTTaGGTTTCCAGTGGTTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: VRISLLVIQSGIPGPEVVSMILI*VSSGSP Trigger: TGGTGAACCACTGGAAACCAAAATTAAAATCATGGA...CACTACCTCTGGGCCTGGGATACCTGACTGTATGACTAGTAAACTTATTCTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS-3UTR CAA 90 bp | ATTGTACAAGTTGACAAAAAGTCTTTGGTCAGTCTAGAAAGAAGACCATCTCAGACAGCAGGTGGATGTTaGTGCACCTCATTGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: IVQVDKKSLVSLERRPSQTAGGC*CTSLGF Trigger: AAAACCCAATGAGGTGCACAAACATCCACCTGCTGT...CTGAGATGGTCTTCTTTCTAGACTGACCAAAGACTTTTTGTCAACTTGTACAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS CCA 72 bp | TGGTGCTGGGCAGGAAGTCCCGGGCCAGGCAGCCCATaGCCACCAGATTCTTATCAGACAGGGGGCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: WCWAGSPGPGSP*PPDSYQTGGSR Trigger: GCGAGAGCCCCCTGTCTGATAAGAATCTGGTGGCCATGGGCTGCCTGGCCCGGGACTTCCTGCCCAGCACCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 72 bp | CCTTCCTCCTCAGCATTCACCTCCCCCTCAGTGGACTaGTCCACGGTCCTCTCGGTCACCAGGTGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSSAFTSPSVD*STVLSVTRCGR Trigger: CCTGCCACACCTGGTGACCGAGAGGACCGTGGACAAGTCCACTGAGGGGGAGGTGAATGCTGAGGAGGAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177715.8 |
||
| CDS TCA 72 bp | GGGGCAAGAGTTGCCCTCTCTGAAGCCACTGCACACTaGTGTCTGCAGGAGAGAAGCCCTTCACCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GARVALSEATAH*CLQERSPSPGR Trigger: CCTGCCTGGTGAAGGGCTTCTCTCCTGCAGACATCAGTGTGCAGTGGCTTCAGAGAGGGCAACTCTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS GCA 72 bp | GTTCGTGGCCTCGCAGATGAGTTTAGACTTGCGTGGTaGAGGGCCAGAGAAGCCATCCCGTGGTGGGACGAA | + |
|
Preference number: 6 (lower is better) Translates to: VRGLADEFRLAW*RAREAIPWWDE Trigger: TTCGTCCCACCACGGGATGGCTTCTCTGGCCCTGCACCACGCAAGTCTAAACTCATCTGCGAGGCCACGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS GCA 72 bp | AGGCAGGTGACTGTGGCTGACTCCCTCAGGTTCAGTTaGTCACGAGCTGGTGGCAGCAGGTACACAGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RQVTVADSLRFS*SRAGGSRYTAG Trigger: ACCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCAACTGAACCTGAGGGAGTCAGCCACAGTCACCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CCA 72 bp | GAAGTTCGTGGCCTCGCAGATGAGTTTAGACTTGCGTaGTGCAGGGCCAGAGAAGCCATCCCGTGGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: EVRGLADEFRLA*CRAREAIPWWD Trigger: GTCCCACCACGGGATGGCTTCTCTGGCCCTGCACCACGCAAGTCTAAACTCATCTGCGAGGCCACGAACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CCA 72 bp | AGTGGACTTGTCCACGGTCCTCTCGGTCACCAGGTGTaGCAGGGCCTCGTGGCCTACAACACAGGTATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGLVHGPLGHQV*QGLVAYNTGIG Trigger: ACCTATACCTGTGTTGTAGGCCACGAGGCCCTGCCACACCTGGTGACCGAGAGGACCGTGGACAAGTCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CCA 72 bp | CAAGGATGCTCTTGGGAGACAGCAACACCTGCGAGGTaGCTAGGTACTTGCCCCCTGTCCTCAGTGTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QGCSWETATPAR*LGTCPLSSVLG Trigger: TCCCAACACTGAGGACAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | AGGCTCTGGCATCGGGGCACTGGTCACATACTTCTCTaGGGGCAAGAGTTGCCCTCTCTGAAGCCACTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLWHRGTGHILL*GQELPSLKPLH Trigger: GTGCAGTGGCTTCAGAGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGACCAGTGCCCCGATGCCAGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS GCA 72 bp | GAACCTTCAAGGATGCTCTTGGGAGACAGCAACACCTaGGAGGTGGCTAGGTACTTGCCCCCTGTCCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: EPSRMLLGDSNT*EVARYLPPVLS Trigger: ACTGAGGACAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | AGGGAGACATTGTACAGTGTGGGTTTACCAGTGGACTaGTCCACGGTCCTCTCGGTCACCAGGTGTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RETLYSVGLPVD*STVLSVTRCGR Trigger: CCTGCCACACCTGGTGACCGAGAGGACCGTGGACAAGTCCACTGGTAAACCCACACTGTACAATGTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS CAA 90 bp | GCAGGGCCAGAGAAGCCATCCCGTGGTGGGACGAACACATTTACATaGGGGTTCATCTCTGCGACAGCTGGAATGGGCACATGCAGATCT | + |
|
Preference number: 6 (lower is better) Translates to: AGPEKPSRGGTNTFT*GFISATAGMGTCRS Trigger: AGATCTGCATGTGCCCATTCCAGCTGTCGCAGAGATGAACCCCAATGTAAATGTGTTCGTCCCACCACGGGATGGCTTCTCTGGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 90 bp | CTCTGGCATCGGGGCACTGGTCACATACTTCTCTTGGGGCAAGAGTaGCCCTCTCTGAAGCCACTGCACACTGATGTCTGCAGGAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LWHRGTGHILLLGQE*PSLKPLHTDVCRRE Trigger: TTCTCTCCTGCAGACATCAGTGTGCAGTGGCTTCAGAGAGGGCAACTCTTGCCCCAAGAGAAGTATGTGACCAGTGCCCCGATGCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | TTGGGAGACAGCAACACCTGCGAGGTGGCTAGGTACTaGCCCCCTGTCCTCAGTGTTGGGAAGGTTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LGDSNTCEVARY*PPVLSVGKVLI Trigger: TATCAGAACCTTCCCAACACTGAGGACAGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS TCA 72 bp | GTGGAGGACACGTTCTTCAAGAAGGTGAGACCCCTGTaGTCCACACGGCAGGTGTACACATTCAGGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VEDTFFKKVRPL*STRQVYTFRFS Trigger: GCTGAACCTGAATGTGTACACCTGCCGTGTGGATCACAGGGGTCTCACCTTCTTGAAGAACGTGTCCTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS TCA 72 bp | TGGCAGCACATGTGGAGGACACGTTCTTCAAGAAGGTaGGACCCCTGTGATCCACACGGCAGGTGTACACAT | + |
|
Preference number: 6 (lower is better) Translates to: WQHMWRTRSSRR*DPCDPHGRCTH Trigger: ATGTGTACACCTGCCGTGTGGATCACAGGGGTCTCACCTTCTTGAAGAACGTGTCCTCCACATGTGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 72 bp | CAGGTGCCGCCTGTGTCAGACATGATCAGGGAGACATaGTACAGTGTGGGTTTACCAGTGGACTTGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: QVPPVSDMIRET*YSVGLPVDLST Trigger: CGTGGACAAGTCCACTGGTAAACCCACACTGTACAATGTCTCCCTGATCATGTCTGACACAGGCGGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103426.3 |
||
| CDS CAA 90 bp | TGGATTTTGCATACCAGGTATTCATCTGAACCTTCAAGGATGCTCTaGGGAGACAGCAACACCTGCGAGGTGGCTAGGTACTTGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: WILHTRYSSEPSRML*GDSNTCEVARYLPP Trigger: AGGGGGCAAGTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATACCTGGTATGCAAAATCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 90 bp | GCTGGTGGCAGCAGGTACACAGCAGGTGGATGTTTGTGCACCTCATaGGGTTTTGAGATGAATTTCTTCTGTGGTGAAGGCAGATCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGGSRYTAGGCLCTS*GFEMNFFCGEGRSL Trigger: CAGGGATCTGCCTTCACCACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTGCTGTGTACCTGCTGCCACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS TCA 72 bp | CCAGGAGATATTCAGGGTTTCATAGGTTGCCAGGTTTaGGACCAGACAGGTCAGGTTAGCGGACTTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGDIQGFIGCQV*DQTGQVSGLAE Trigger: CTCAGCAAGTCCGCTAACCTGACCTGTCTGGTCTCAAACCTGGCAACCTATGAAACCCTGAATATCTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 72 bp | CATACCAGGTATTCATCTGAACCTTCAAGGATGCTCTaGGGAGACAGCAACACCTGCGAGGTGGCTAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: HTRYSSEPSRML*GDSNTCEVARY Trigger: GTACCTAGCCACCTCGCAGGTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATACCTGGTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 90 bp | CCAGTCGATTTCAGAGATGGTAAGTGTGCTTATGACCTTGTAGGTTaGGGGTGTGGATCCTTTGTTCTCGATGGTCACCGGATCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PVDFRDGKCAYDLVG*GCGSFVLDGHRICG Trigger: ACCACAGATCCGGTGACCATCGAGAACAAAGGATCCACACCCCAAACCTACAAGGTCATAAGCACACTTACCATCTCTGAAATCGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 90 bp | AGTTGCTCACGAGCTGGTGGCAGCAGGTACACAGCAGGTGGATGTTaGTGCACCTCATTGGGTTTTGAGATGAATTTCTTCTGTGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SCSRAGGSRYTAGGC*CTSLGFEMNFFCGE Trigger: TTCACCACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTGCTGTGTACCTGCTGCCACCAGCTCGTGAGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS TCA 72 bp | GCCTCCGTAGTGGATTTTGCATACCAGGTATTCATCTaGACCTTCAAGGATGCTCTTGGGAGACAGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: ASVVDFAYQVFI*TFKDALGRQQH Trigger: GTGTTGCTGTCTCCCAAGAGCATCCTTGAAGGTTCAGATGAATACCTGGTATGCAAAATCCACTACGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS GCA 72 bp | GCTGGTGGCAGCAGGTACACAGCAGGTGGATGTTTGTaGACCTCATTGGGTTTTGAGATGAATTTCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGGSRYTAGGCL*TSLGFEMNFFC Trigger: ACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTGCTGTGTACCTGCTGCCACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CAA 72 bp | TTCAGAGATGGTAAGTGTGCTTATGACCTTGTAGGTTaGGGGTGTGGATCCTTTGTTCTCGATGGTCACCGG | + |
|
Preference number: 6 (lower is better) Translates to: FRDGKCAYDLVG*GCGSFVLDGHR Trigger: CCGGTGACCATCGAGAACAAAGGATCCACACCCCAAACCTACAAGGTCATAAGCACACTTACCATCTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS TCA 72 bp | CAGGTGGATGTTTGTGCACCTCATTGGGTTTTGAGATaGATTTCTTCTGTGGTGAAGGCAGATCCCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVDVCAPHWVLR*ISSVVKADPCE Trigger: CTCACAGGGATCTGCCTTCACCACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CCA 72 bp | CATTTACATTGGGGTTCATCTCTGCGACAGCTGGAATaGGCACATGCAGATCTTTGTTTTTGCCTCCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HLHWGSSLRQLE*AHADLCFCLRS Trigger: ACTACGGAGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGCTGTCGCAGAGATGAACCCCAATGTAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
||
| CDS CCA 72 bp | GAACACATTTACATTGGGGTTCATCTCTGCGACAGCTaGAATGGGCACATGCAGATCTTTGTTTTTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: EHIYIGVHLCDS*NGHMQIFVFAS Trigger: GGAGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGCTGTCGCAGAGATGAACCCCAATGTAAATGTGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | AGCAGGTACACAGCAGGTGGATGTTTGTGCACCTCATaGGGTTTTGAGATGAATTTCTTCTGTGGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: SRYTAGGCLCTS*GFEMNFFCGEG Trigger: GCCTTCACCACAGAAGAAATTCATCTCAAAACCCAATGAGGTGCACAAACATCCACCTGCTGTGTACCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS GCA 72 bp | CGACAGCTGGAATGGGCACATGCAGATCTTTGTTTTTaGCTCCGTAGTGGATTTTGCATACCAGGTATTCAT | + |
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Preference number: 6 (lower is better) Translates to: RQLEWAHADLCF*LRSGFCIPGIH Trigger: ATGAATACCTGGTATGCAAAATCCACTACGGAGGCAAAAACAAAGATCTGCATGTGCCCATTCCAGCTGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | CAAACACTAGCCACACCCTTAGCACTGAAGGTGCCATaGGGATGGCTTTCCATGATTTTAATTTTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QTLATPLALKVP*GWLSMILILVS Trigger: GGAAACCAAAATTAAAATCATGGAAAGCCATCCCAATGGCACCTTCAGTGCTAAGGGTGTGGCTAGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS TCA 72 bp | GAGATGAATTTCTTCTGTGGTGAAGGCAGATCCCTGTaGGTCACAGTACACACAAATTCCTTCCTGTTATTC | + |
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Preference number: 6 (lower is better) Translates to: EMNFFCGEGRSL*VTVHTNSFLLF Trigger: GAATAACAGGAAGGAATTTGTGTGTACTGTGACTCACAGGGATCTGCCTTCACCACAGAAGAAATTCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CCA 72 bp | GGGATGGCTTTCCATGATTTTAATTTTGGTTTCCAGTaGTTCACCACTTTGAGAAGCCCAGGAGATATTCAG | + |
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Preference number: 6 (lower is better) Translates to: GMAFHDFNFGFQ*FTTLRSPGDIQ Trigger: CTGAATATCTCCTGGGCTTCTCAAAGTGGTGAACCACTGGAAACCAAAATTAAAATCATGGAAAGCCATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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| CDS CAA 72 bp | CATGATTTTAATTTTGGTTTCCAGTGGTTCACCACTTaGAGAAGCCCAGGAGATATTCAGGGTTTCATAGGT | + |
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Preference number: 6 (lower is better) Translates to: HDFNFGFQWFTT*RSPGDIQGFIG Trigger: ACCTATGAAACCCTGAATATCTCCTGGGCTTCTCAAAGTGGTGAACCACTGGAAACCAAAATTAAAATCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103426.3 ENSMUST00000177715.8 |
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