Pregenerated sensors for IGHG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076615Ensembl transcript IDs: ENSMUST00000103423.3, ENSMUST00000223179.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTaGCTCCTGTACCTGCTAGGGCCCAACAGAGGCTATGAAGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: ALLLRAFLGCPAFAQ*LLYLLGPNRGYEAQ Trigger: CTGAGCTTCATAGCCTCTGTTGGGCCCTAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR TCA 90 bp | GACAGGGCTGGCTCTAAGGCTCATCTGCATCTAAATGGATGCAGGTaGTGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGGGCTAGACAC | + |
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Preference number: 1 (lower is better) Translates to: DRAGSKAHLHLNGCR*CSPSWESAWLRARH Trigger: GTGTCTAGCCCTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGCAGATGAGCCTTAGAGCCAGCCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 90 bp | GGTAGTGGTGCTTGGGTCCTGTTGGCTATGGTCTGGGGCAAAGCCTaGTTTCCACATGCTGCTCCAAATGTGGAAGGGACCTGGGTAGCA | + |
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Preference number: 1 (lower is better) Translates to: GSGAWVLLAMVWGKA*FPHAAPNVEGTWVA Trigger: TGCTACCCAGGTCCCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 90 bp | AGGCCTGGGCTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTaGTGTCAGTGGCCCAGTCTGGATGCCAGGCTGCAGGAAAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: RPGLSLWISTLTGIL*CQWPSLDARLQERP Trigger: GGGCCTTTCCTGCAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAGCCCAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 90 bp | TGGCCCAGTCTGGATGCCAGGCTGCAGGAAAGGCCCATTTCTGCCTaGCTTTTTAAGCATCCTTTCTCTCTCTCCCCATGTTGCTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: WPSLDARLQERPISA*LFKHPFSLSPCCSW Trigger: CCAGGAGCAACATGGGGAGAGAGAGAAAGGATGCTTAAAAAGCCAGGCAGAAATGGGCCTTTCCTGCAGCCTGGCATCCAGACTGGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 90 bp | TGTTTTGGCTGTGGTAGTGGTGCTTGGGTCCTGTTGGCTATGGTCTaGGGCAAAGCCTGCTTTCCACATGCTGCTCCAAATGTGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: CFGCGSGAWVLLAMV*GKACFPHAAPNVEG Trigger: CCCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACAGCCAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 90 bp | CTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTaGCCCAGTCTGGATGCCAGGCTGCAGGAAAGGCCCATTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LSLWISTLTGILCCQ*PSLDARLQERPISA Trigger: GGCAGAAATGGGCCTTTCCTGCAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR TCA 90 bp | GAGGTAACAGTGCCCTGGTCTTCAAGCTGTGGGGTCAGCAGTGTCTaGTGGGATCTTGCATTTGAGATTTCATCATGTTGCATGGATGGC | + |
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Preference number: 1 (lower is better) Translates to: EVTVPWSSSCGVSSV*WDLAFEISSCCMDG Trigger: GCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCACAGCTTGAAGACCAGGGCACTGTTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR TCA 90 bp | ATTTCTCCTTTGTCTTTTCTGGGGACTCTGGCCTGGCATTTGCCTTaGTATGAAATGGAGAAACAGCCACAGTGCCTCTCCAATGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: ISPLSFLGTLAWHLP*YEMEKQPQCLSNAS Trigger: GCTGGCATTGGAGAGGCACTGTGGCTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCAGAAAAGACAAAGGAGAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 90 bp | CCTGGATTTCTCCTTTGTCTTTTCTGGGGACTCTGGCCTGGCATTTaGCTTGATATGAAATGGAGAAACAGCCACAGTGCCTCTCCAATG | + |
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Preference number: 1 (lower is better) Translates to: PGFLLCLFWGLWPGI*LDMKWRNSHSASPM Trigger: CATTGGAGAGGCACTGTGGCTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCAGAAAAGACAAAGGAGAAATCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 90 bp | GCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCATaGATGGCAGGAAAAGAGGTCTTCACAAGTAGCCCCATCTTACAT | + |
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Preference number: 1 (lower is better) Translates to: AVSDGILHLRFHHVA*MAGKEVFTSSPILH Trigger: ATGTAAGATGGGGCTACTTGTGAAGACCTCTTTTCCTGCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CAA 90 bp | TTGGGACTGACCGGGGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTaGCCCAGCCTTTGCTCAGTGGCTCCTGTACCTGCTAGGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LGLTGVCSSPTGFSG*PSLCSVAPVPARAQ Trigger: TTGGGCCCTAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACCCCGGTCAGTCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCCCCATGTTGCTCCTGGACCACCTTTGGGACTGACCGGGGTCTGCTCTCTGTTGGCTATGGTCTaGGGCAAAGCCTGCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LSPHVAPGPPLGLTGVCSLLAMV*GKACFP Trigger: TGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAG...AGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCCCCATGTTGCTCCTGGACCACCTTTGGGACTGACCGGGGTCTGCTCTTGTGGTAGTGGTGCTTaGGTCCTGTTGGCTATGGTC | + |
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Preference number: 2 (lower is better) Translates to: LSPHVAPGPPLGLTGVCSCGSGA*VLLAMV Trigger: GACCATAGCCAACAGGACCCAAGCACCACTACCACA...AGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CAA 90 bp | GACCCTATCCACTGTTTTGGCTGTGGTAGTGGTGCTTGGGTCCTGTaGGCTATGGTCTGGGGCAAAGCCTGCTTTCCACATGCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: DPIHCFGCGSGAWVL*AMVWGKACFPHAAP Trigger: TGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACAGCCAAAACAGTGGATAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTAAATGGATGCAGGTGATGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGAGGGCTAGCAAGCTCTaGCACCTTCTGAAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: ASKWMQVMQPILGECLAERASKL*HLLKRQ Trigger: CTGTCTCTTCAGAAGGTGCCAGAGCTTGCTAGCCCT...CTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCTAAATGGATGCAGGTGATGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGAATGTGGAAGGGACCTaGGTAGCAGAGTCAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: ASKWMQVMQPILGECLAENVEGT*VAESEP Trigger: TGGCTCTGACTCTGCTACCCAGGTCCCTTCCACATT...CTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTGGCTTACATTCCAAGAAGTaGAAAAACACGGCAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: GLLFSYGLFWVAQPLLSGLHSKK*KNTAGH Trigger: GTGCCCTGCCGTGTTTTTTCACTTCTTGGAATGTAA...GCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | GCATCTAAATGGATGCAGGTGATGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGAGCCTGCTTTCCACATaGTGCTCCAAATGTGGAAGG | + |
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Preference number: 2 (lower is better) Translates to: ASKWMQVMQPILGECLAESLLST*CSKCGR Trigger: CCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCT...CTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCTCTCTCTCCCCATGTTaGTCCTGGACCACCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLSLWISTLTGILCCQWPSLSPC*SWTTFG Trigger: CCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAGA...GGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTGGCATCATGTTGCATGGATaGCAGGAAAAGAGGTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: GLLFSYGLFWVAQPLLSGIMLHG*QEKRSS Trigger: TGAAGACCTCTTTTCCTGCCATCCATGCAACATGAT...GCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCAGGGTCCTGTTGGCTATaGTCTGGGGCAAAGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VGSAVSDGILHLRFHHVAGSCWL*SGAKPA Trigger: AGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCC...TGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | GGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCATGGGTCTGGGGCAAAGCCTaGTTTCCACATGCTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: GSAVSDGILHLRFHHVAWVWGKA*FPHAAP Trigger: TGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGAC...CCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCGAAACACAGCAGTTTTaGCCCTATCCACTGTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLSLWISTLTGILCCQWPETQQF*PYPLFW Trigger: CCAAAACAGTGGATAGGGTCAAAACTGCTGTGTTTC...GGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CAA 90 bp | GGTCTTCAAGCTGTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTaGAGATTTCATCATGTTGCATGGATGGCAGGAAAAGAGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GLQAVGSAVSDGILH*RFHHVAWMAGKEVF Trigger: GAAGACCTCTTTTCCTGCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCACAGCTTGAAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACAGAGGCTATGAAGCTCAGGCCCTCTGAGTGTCTCTCTAGGTCATCCACTGAGATTTCATCATGTTaGATGGATGGCAGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PTEAMKLRPSECLSRSSTEISSC*MDGRKR Trigger: TCTTTTCCTGCCATCCATGCAACATGATGAAATCTC...AGTGGATGACCTAGAGAGACACTCAGAGGGCCTGAGCTTCATAGCCTCTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGGTCAGTCAGCCTCAGTaGCCCAGGCCTGGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLEVSQPQ*PRPGLS Trigger: AGAGAGCCCAGGCCTGGGGCACTGAGGCTGACTGAC...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGATTCTCTGCTGTCAGTaGCCCAGTCTGGATGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLEILCCQ*PSLDAR Trigger: CCTGGCATCCAGACTGGGCCACTGACAGCAGAGAAT...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGCTAAATGGATGCAGGTaGTGCAGCCCATCTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLELNGCR*CSPSWE Trigger: CTCCCAAGATGGGCTGCATCACCTGCATCCATTTAG...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR GCA 90 bp | TCCAGAAAATTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATACAGTGCCTCTCCAATaGCAGCAGTCAGTCAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: SRKFKEKAGKAKLQVSEHTVPLQ*QQSVSL Trigger: GAGGCTGACTGACTGCTGGCATTGGAGAGGCACTGT...ATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAATTTTCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGCTCCTTTGTCTTTTCTaGGGACTCTGGCCTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLELLCLF*GLWPGI Trigger: AATGCCAGGCCAGAGTCCCCAGAAAAGACAAAGGAG...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAAAATTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCAAAGGATGCTGAGATaGGAAGGCAGTGTAACCCGT | + |
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Preference number: 2 (lower is better) Translates to: SRKFKEKAGKAKLQVSEHQRMLR*EGSVTR Trigger: ACGGGTTACACTGCCTTCTCATCTCAGCATCCTTTG...ATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAATTTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAAAATTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCCAAAGAGTTCCCTTTaGGGCCTTCTCAGCCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: SRKFKEKAGKAKLQVSEHPKSSL*GLLSLR Trigger: TCTAAGGCTGAGAAGGCCTCAAAGGGAACTCTTTGG...ATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAATTTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGTCATCTGCATCTAAATaGATGCAGGTGATGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLESSASK*MQVMQP Trigger: GGGCTGCATCACCTGCATCCATTTAGATGCAGATGA...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGGCCTGGCATTTGCCTTaGTATGAAATGGAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: FKEKAGKAKLQVSEHLLEAWHLP*YEMEKQ Trigger: CTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGC...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 72 bp | GTTGCTCCTGGACCACCTTTGGGACTGACCGGGGTCTaGTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: VAPGPPLGLTGV*SSPTGFSGLPS Trigger: GCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 72 bp | CCGGGGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTaGCCAGCCTTTGCTCAGTGGCTCCTGTACCTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PGSALLLRAFLG*PAFAQWLLYLL Trigger: TAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | ACTGACCGGGGTCTGCTCTTCTCCTACGGGCTTTTCTaGGTTGCCCAGCCTTTGCTCAGTGGCTCCTGTACC | + |
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Preference number: 3 (lower is better) Translates to: TDRGLLFSYGLF*VAQPLLSGSCT Trigger: GGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACCCCGGTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 72 bp | TCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTaGTCAGTGGCTCCTGTACCTGCTAGGGCCCAACAG | + |
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Preference number: 3 (lower is better) Translates to: SSPTGFSGLPSL*SVAPVPARAQQ Trigger: CTGTTGGGCCCTAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | CTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTaGCTCCTGTACCTGCTAGGGCCCAACAGAGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: LRAFLGCPAFAQ*LLYLLGPNRGY Trigger: ATAGCCTCTGTTGGGCCCTAGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CAA 90 bp | CCAACAGAGGCTATGAAGCTCAGGCCCTCTGAGTGTCTCTCTAGGTCATCCACTGTGATGCAGCCCATCTaGGGAGAGTGCCTGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: PTEAMKLRPSECLSRSSTVMQPI*GECLAE Trigger: CTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCAC...AGTGGATGACCTAGAGAGACACTCAGAGGGCCTGAGCTTCATAGCCTCTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR GCA 72 bp | GCTTGGGTCCTGTTGGCTATGGTCTGGGGCAAAGCCTaGTTTCCACATGCTGCTCCAAATGTGGAAGGGACC | + |
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Preference number: 3 (lower is better) Translates to: AWVLLAMVWGKA*FPHAAPNVEGT Trigger: GGTCCCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | GATGCTGAGATGAGAAGGCAGTGTAACCCGTGTGTCTaGCAGCTCAGCAGCATGGACTTGGTCCTAGAGGGC | + |
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Preference number: 3 (lower is better) Translates to: DAEMRRQCNPCV*QLSSMDLVLEG Trigger: GCCCTCTAGGACCAAGTCCATGCTGCTGAGCTGCCAGACACACGGGTTACACTGCCTTCTCATCTCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | GACCCTATCCACTGTTTTGGCTGTGGTAGTGGTGCTTaGGTCCTGTTGGCTATGGTCTGGGGCAAAGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: DPIHCFGCGSGA*VLLAMVWGKAC Trigger: GCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACAGCCAAAACAGTGGATAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR TCA 72 bp | GGCTCTAAGGCTCATCTGCATCTAAATGGATGCAGGTaGTGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSKAHLHLNGCR*CSPSWESAWLR Trigger: CCTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGCAGATGAGCCTTAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCTGCAGGAAAGGCCCATTTCTGCCTGGCTTTTTAAGCATCCTTTCTCTACGGGCTTTTCTGGGTaGCCCAGCCTTTGCTCAGTG | + |
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Preference number: 3 (lower is better) Translates to: ARLQERPISAWLFKHPFSTGFSG*PSLCSV Trigger: CACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGT...AGAGAAAGGATGCTTAAAAAGCCAGGCAGAAATGGGCCTTTCCTGCAGCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | TGTGGTAGTGGTGCTTGGGTCCTGTTGGCTATGGTCTaGGGCAAAGCCTGCTTTCCACATGCTGCTCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: CGSGAWVLLAMV*GKACFPHAAPN Trigger: ATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
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| 3UTR CCA 72 bp | TTTAAGCATCCTTTCTCTCTCTCCCCATGTTGCTCCTaGACCACCTTTGGGACTGACCGGGGTCTGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FKHPFSLSPCCS*TTFGTDRGLLF Trigger: GAAGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAGAGAAAGGATGCTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CCA 72 bp | TGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTaGCCCAGTCTGGATGCCAGGCTGCAGGAAAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: WISTLTGILCCQ*PSLDARLQERP Trigger: GGGCCTTTCCTGCAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR GCA 72 bp | CTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTaGTGTCAGTGGCCCAGTCTGGATGCCAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLWISTLTGIL*CQWPSLDARLQ Trigger: CTGCAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CCA 72 bp | TGGGGACTCTGGCCTGGCATTTGCCTTGATATGAAATaGAGAAACAGCCACAGTGCCTCTCCAATGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WGLWPGICLDMK*RNSHSASPMPA Trigger: TGCTGGCATTGGAGAGGCACTGTGGCTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCCCCATGTTGCTCCTGGACCACCTTTGGGACTGACCGGGGTCTGCTCTGTGTCTGATGGGATCTaGCATTTGAGATTTCATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSPHVAPGPPLGLTGVCSVSDGI*HLRFHH Trigger: ATGATGAAATCTCAAATGCAAGATCCCATCAGACAC...AGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCAGGTGCTTGGGTCCTGTaGGCTATGGTCTGGGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGSAVSDGILHLRFHHVAGAWVL*AMVWGK Trigger: TTTGCCCCAGACCATAGCCAACAGGACCCAAGCACC...TGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR TCA 72 bp | GTCTTCACAAGTAGCCCCATCTTACATTCCAAGAAGTaGAAAAACACGGCAGGGCACTGGTTGGGTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VFTSSPILHSKK*KNTAGHWLGEG Trigger: GCCTTCACCCAACCAGTGCCCTGCCGTGTTTTTTCACTTCTTGGAATGTAAGATGGGGCTACTTGTGAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR TCA 72 bp | TTTTCTGGGGACTCTGGCCTGGCATTTGCCTTGATATaGAATGGAGAAACAGCCACAGTGCCTCTCCAATGC | + |
|
Preference number: 3 (lower is better) Translates to: FSGDSGLAFALI*NGETATVPLQC Trigger: GCATTGGAGAGGCACTGTGGCTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR GCA 72 bp | CTCCTTTGTCTTTTCTGGGGACTCTGGCCTGGCATTTaGCTTGATATGAAATGGAGAAACAGCCACAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLCLFWGLWPGI*LDMKWRNSHSA Trigger: GGCACTGTGGCTGTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCAGAAAAGACAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCAGTCTGGATGCCAGGCTGAGAAACACAGCAGTTTaGACCCTATCCACTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: STLTGILCCQWPSLDARLRNTAV*TLSTVL Trigger: CAAAACAGTGGATAGGGTCAAAACTGCTGTGTTTCT...CAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR TCA 72 bp | AGTCACCTTTGGCAGTCCTTCCCAAAGAGTTCCCTTTaGGGCCTTCTCAGCCTTAGAGACACATGGAAACTT | + |
|
Preference number: 3 (lower is better) Translates to: SHLWQSFPKSSL*GLLSLRDTWKL Trigger: AAGTTTCCATGTGTCTCTAAGGCTGAGAAGGCCTCAAAGGGAACTCTTTGGGAAGGACTGCCAAAGGTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR TCA 72 bp | CTGTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTTaGGATTTCATCATGTTGCATGGATGGCAGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LWGQQCLMGSCI*DFIMLHGWQEK Trigger: CTTTTCCTGCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CCA 72 bp | GATGGGATCTTGCATTTGAGATTTCATCATGTTGCATaGATGGCAGGAAAAGAGGTCTTCACAAGTAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DGILHLRFHHVA*MAGKEVFTSSP Trigger: GGGGCTACTTGTGAAGACCTCTTTTCCTGCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CCA 72 bp | CTTCCTGGATTTCTCCTTTGTCTTTTCTGGGGACTCTaGCCTGGCATTTGCCTTGATATGAAATGGAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LPGFLLCLFWGL*PGICLDMKWRN Trigger: GTTTCTCCATTTCATATCAAGGCAAATGCCAGGCCAGAGTCCCCAGAAAAGACAAAGGAGAAATCCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGAAAATTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCCATTAGAGTCACCTTaGGCAGTCCTTCCCAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRKFKEKAGKAKLQVSEHPLESP*AVLPKE Trigger: CTCTTTGGGAAGGACTGCCAAAGGTGACTCTAATGG...ATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAATTTTCTGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CAA 72 bp | ACCGGGGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTaGCCCAGCCTTTGCTCAGTGGCTCCTGTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGVCSSPTGFSG*PSLCSVAPVPA Trigger: AGCAGGTACAGGAGCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACCCCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTGCAGGAAAGGCCCATTTCTGCCTGGCTTTTTAAGCATCCTTTCTCTCCCCTCATCCAGTCCTaGTGCTGGATGGGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLQERPISAWLFKHPFSPLIQS*CWMGRA Trigger: TGCCCTCCCCATCCAGCACCAGGACTGGATGAGGGG...AGAGAAAGGATGCTTAAAAAGCCAGGCAGAAATGGGCCTTTCCTGCAGCCTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCTGCAGGAAAGGCCCATTTCTGCCTGGCTTTTTAAGCATCCTTTCTCTGGATGGGGAGGGCACTaGCCACTCGGAAGGTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLQERPISAWLFKHPFSGWGGH*PLGRYC Trigger: ACAGTACCTTCCGAGTGGTCAGTGCCCTCCCCATCC...AGAGAAAGGATGCTTAAAAAGCCAGGCAGAAATGGGCCTTTCCTGCAGCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGTAGTGGTGCTTGGGTCCTGTTGGCTATGGTCTGGGGCAAAGCCTGCTTTCAGGGAAGTAGCCTTTaGCAAGGCATCCCAGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGSGAWVLLAMVWGKACFQGSSL*QGIPVS Trigger: TGACACTGGGATGCCTTGTCAAAGGCTACTTCCCTG...AAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTGGCCATCCGAGTCCAGGATaGGTGGAGTGTTCTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GLLFSYGLFWVAQPLLSGHPSPG*VECSCN Trigger: ATTACAAGAACACTCCACCCATCCTGGACTCGGATG...GCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGTAGTGGTGCTTGGGTCCTGTTGGCTATGGTCTGGGGCAAAGCCTGCTTTCACGAGGTGGGGGTATaGTGTATACTTGAGGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CGSGAWVLLAMVWGKACFHEVGV*CILEVS Trigger: AGACACCTCAAGTATACACCATACCCCCACCTCGTG...AAAGCAGGCTTTGCCCCAGACCATAGCCAACAGGACCCAAGCACCACTACCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCGGGTTAGGGAGATCATaGGTGCATCCTTGGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLSLWISTLTGILCCQWPGLGRS*VHPWAL Trigger: CAAAGCCCAAGGATGCACTCATGATCTCCCTAACCC...GGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CCA 90 bp | GTTCCCTTTGAGGCCTTCTCAGCCTTAGAGACACATGGAAACTTCCTCTTCTCTTTGCAGATGACAGTCTaGCTGGGCCAGGTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPFEAFSALETHGNFLFSLQMTV*LGQVLE Trigger: CTCCAGCACCTGGCCCAGCCAGACTGTCATCTGCAA...AGAGAAGAGGAAGTTTCCATGTGTCTCTAAGGCTGAGAAGGCCTCAAAGGGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGGCTGCAGGAAAGGCCCATTTCTGCCTGGCTTTTTAAGCATCCTTTCTCTTGTCTGTATCCACAGTaGGCTTGCTGTAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARLQERPISAWLFKHPFSCLYPQ*ACCRGS Trigger: ACTTCCTCTACAGCAAGCTCACTGTGGATACAGACA...AGAGAAAGGATGCTTAAAAAGCCAGGCAGAAATGGGCCTTTCCTGCAGCCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTCTCTCTGGATATCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCTTATGGAGAGCCTCATaGACCACGGAGCAGGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSLWISTLTGILCCQWPLWRAS*TTEQVK Trigger: TTTTACCTGCTCCGTGGTGCATGAGGCTCTCCATAA...GGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGATATCCAGAGAGAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCATGCATCCTTGGGCTTTaGGGGGAAGATGAAGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: VGSAVSDGILHLRFHHVACILGL*GEDEDG Trigger: TCCGTCTTCATCTTCCCCCCAAAGCCCAAGGATGCA...TGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| 3UTR CAA 72 bp | CTTCAAGCTGTGGGGTCAGCAGTGTCTGATGGGATCTaGCATTTGAGATTTCATCATGTTGCATGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQAVGSAVSDGI*HLRFHHVAWMA Trigger: TGCCATCCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCACAGCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATCTCTTAGAGCAGTCACCAAGCTGCTaGGGGAATAGAACCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FKEKAGKAKLQVSEHLLEQSPSC*GNRTQT Trigger: AGTCTGGGTTCTATTCCCTCAGCAGCTTGGTGACTG...CTCTAAGAGATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR TCA 90 bp | TCCAGAAAATTTAAAGAAAAAGCTGGCAAAGCTAAGCTTCAAGTCAGTGAACATTCTTCCTTTGGGTTTTaGGATGGTTCTCTCGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKFKEKAGKAKLQVSEHSSFGF*DGSLDG Trigger: CCCATCGAGAGAACCATCTCAAAACCCAAAGGAAGA...ATGTTCACTGACTTGAAGCTTAGCTTTGCCAGCTTTTTCTTTAAATTTTCTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAAAGCCTGCTTTCCACATGCTGCTCCAAATGTGGAAGGGACCTGGGTAGCTGGGTGGGCTACGTaGCAGATGACAGTCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WGKACFPHAAPNVEGTWVAGWAT*QMTVWL Trigger: CAGCCAGACTGTCATCTGCAACGTAGCCCACCCAGC...TACCCAGGTCCCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAAAGCCTGCTTTCCACATGCTGCTCCAAATGTGGAAGGGACCTGGGTATTGATCAACTCAGTCTaGCTGGCTGGGTGGGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: WGKACFPHAAPNVEGTWVLINSV*LAGWAT Trigger: CGTAGCCCACCCAGCCAGCAAGACTGAGTTGATCAA...TACCCAGGTCCCTTCCACATTTGGAGCAGCATGTGGAAAGCAGGCTTTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCCCCATGTTGCTCCTGGACCACCTTTGGGACTGACCGGGGTCTGCTCTCTCTTCCTTTGGGTTTaGAGATGGTTCTCTCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: LSPHVAPGPPLGLTGVCSLFLWV*RWFSRW Trigger: CCATCGAGAGAACCATCTCAAAACCCAAAGGAAGAG...AGAGCAGACCCCGGTCAGTCCCAAAGGTGGTCCAGGAGCAACATGGGGAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTGGCGTCTGGGCTCTTCCTTaGGGTTTTGAGATGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLLFSYGLFWVAQPLLSGVWALP*GFEMVL Trigger: GAGAACCATCTCAAAACCCAAAGGAAGAGCCCAGAC...GCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS CCA 90 bp | TTGTTGTTGACCTTGCATTTGAACTCCTTGCCCCTCATCCAGTCCTaGTGCTGGATGGGGAGGGCACTGACCACTCGGAAGGTACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLTLHLNSLPLIQS*CWMGRALTTRKVLL Trigger: CAACAGTACCTTCCGAGTGGTCAGTGCCCTCCCCATCCAGCACCAGGACTGGATGAGGGGCAAGGAGTTCAAATGCAAGGTCAACAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | GCATCTAAATGGATGCAGGTGATGCAGCCCATCTTGGGAGAGTGCCTGGCTGAGGGGTATGGTGTATACTaGAGGTGTCTGGGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASKWMQVMQPILGECLAEGYGVY*RCLGSS Trigger: GGAAGAGCCCAGACACCTCAAGTATACACCATACCC...CTCAGCCAGGCACTCTCCCAAGATGGGCTGCATCACCTGCATCCATTTAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | TCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCAGTCTGGATGCCAGGCTGGCTTCAGAGAAGAAGTaGGTGACCAGGCAGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: STLTGILCCQWPSLDARLASEKK*VTRQVR Trigger: TCTGACCTGCCTGGTCACCAACTTCTTCTCTGAAGC...CAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | CCAACAGAGGCTATGAAGCTCAGGCCCTCTGAGTGTCTCTCTAGGTCATCCACTAAGATCCACTTCACCTaGAAGAGGGTGACAGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PTEAMKLRPSECLSRSSTKIHFT*KRVTEA Trigger: CGCCTCTGTCACCCTCTTCAAGGTGAAGTGGATCTT...AGTGGATGACCTAGAGAGACACTCAGAGGGCCTGAGCTTCATAGCCTCTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS TCA 90 bp | CTCCATAGTTCCATTTTACAGTTACCGGCTCAGGGAAGTAGCCTTTaGCAAGGCATCCCAGTGTCACCGAGGATCCAGATGTGTCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHSSILQLPAQGSSL*QGIPVSPRIQMCHR Trigger: GCGGTGACACATCTGGATCCTCGGTGACACTGGGATGCCTTGTCAAAGGCTACTTCCCTGAGCCGGTAACTGTAAAATGGAACTATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | TCTACTCTAACTGGTATTCTCTGCTGTCAGTGGCCCAGTCTGGATGCCAGGCTGGCTTTGTTGTTGACCTaGCATTTGAACTCCTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STLTGILCCQWPSLDARLALLLT*HLNSLP Trigger: GGGCAAGGAGTTCAAATGCAAGGTCAACAACAAAGC...CAGCCTGGCATCCAGACTGGGCCACTGACAGCAGAGAATACCAGTTAGAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTGCTCTTCTCCTACGGGCTTTTCTGGGTTGCCCAGCCTTTGCTCAGTGGCGGTAAAAATTTCTCCTaGCAACCAACTGTCTGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GLLFSYGLFWVAQPLLSGGKNFS*QPTVCI Trigger: GATACAGACAGTTGGTTGCAAGGAGAAATTTTTACC...GCCACTGAGCAAAGGCTGGGCAACCCAGAAAAGCCCGTAGGAGAAGAGCAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | GGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCATGGTTGCATTTGAACTCCTaGCCCCTCATCCAGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSAVSDGILHLRFHHVAWLHLNS*PLIQSW Trigger: CCAGGACTGGATGAGGGGCAAGGAGTTCAAATGCAA...CCATGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGGTCAGCAGTGTCTGATGGGATCTTGCATTTGAGATTTCATCATGTTGCATTGTTGACCTTGCATTaGAACTCCTTGCCCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: VGSAVSDGILHLRFHHVALLTLH*NSLPLI Trigger: GATGAGGGGCAAGGAGTTCAAATGCAAGGTCAACAA...TGCAACATGATGAAATCTCAAATGCAAGATCCCATCAGACACTGCTGACCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223179.2 |
||
| CDS TCA 72 bp | ACTCAGTCTTGCTGGCTGGGTGGGCTACGTTGCAGATaGCAGTCTGGCTGGGCCAGGTGCTGGAGGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: TQSCWLGGLRCR*QSGWARCWRVQ Trigger: CTGTACCCTCCAGCACCTGGCCCAGCCAGACTGTCATCTGCAACGTAGCCCACCCAGCCAGCAAGACTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS TCA 72 bp | GGGAGGGCACTGACCACTCGGAAGGTACTGTTGTACTaGGCTTCACGGGGCTGCGTCCAGGCTGTGTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: GRALTTRKVLLY*ASRGCVQAVCT Trigger: AGTACACACAGCCTGGACGCAGCCCCGTGAAGCTCAGTACAACAGTACCTTCCGAGTGGTCAGTGCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS CCA 72 bp | ACCTTGCATTTGAACTCCTTGCCCCTCATCCAGTCCTaGTGCTGGATGGGGAGGGCACTGACCACTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLHLNSLPLIQS*CWMGRALTTRK Trigger: CTTCCGAGTGGTCAGTGCCCTCCCCATCCAGCACCAGGACTGGATGAGGGGCAAGGAGTTCAAATGCAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS CAA 72 bp | TTGATCAACTCAGTCTTGCTGGCTGGGTGGGCTACGTaGCAGATGACAGTCTGGCTGGGCCAGGTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LINSVLLAGWAT*QMTVWLGQVLE Trigger: CTCCAGCACCTGGCCCAGCCAGACTGTCATCTGCAACGTAGCCCACCCAGCCAGCAAGACTGAGTTGATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS GCA 72 bp | GGGAATAGAACCCAGACTGCAGTACAGATGAGACTGTaGGCACACCGCTGGACAGGGCTCCATAGTTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: GNRTQTAVQMRL*AHRWTGLHSSI Trigger: AATGGAACTATGGAGCCCTGTCCAGCGGTGTGCGCACAGTCTCATCTGTACTGCAGTCTGGGTTCTATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
||
| CDS CCA 72 bp | GTGTGTACTTCTTTGTTGTCCACAAACCAGCTGACATaGACATCTGGGTCATCCTCGCTCACATCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: VCTSLLSTNQLT*TSGSSSLTSTT Trigger: GGTGGTGGATGTGAGCGAGGATGACCCAGATGTCCATGTCAGCTGGTTTGTGGACAACAAAGAAGTACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
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| CDS CCA 72 bp | CCTTCTTCTTGGACATTTGTTCACGAGGTGGGGGTATaGTGTATACTTGAGGTGTCTGGGCTCTTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSWTFVHEVGV*CILEVSGLFLW Trigger: CCAAAGGAAGAGCCCAGACACCTCAAGTATACACCATACCCCCACCTCGTGAACAAATGTCCAAGAAGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
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| CDS TCA 72 bp | GACATTTGTTCACGAGGTGGGGGTATGGTGTATACTTaGGGTGTCTGGGCTCTTCCTTTGGGTTTTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: DICSRGGGMVYT*GVWALPLGFEM Trigger: CATCTCAAAACCCAAAGGAAGAGCCCAGACACCTCAAGTATACACCATACCCCCACCTCGTGAACAAATGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103423.3 ENSMUST00000223179.2 |
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