Pregenerated sensors for IGHG2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076612Ensembl transcript IDs: ENSMUST00000103416.9, ENSMUST00000195192.2
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGGTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATaGATATGGGTGCCAGTGTCCATTAGGACCCAGGAGCATTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: MVPGFAGCFIYTRDA*IWVPVSIRTQEHCV Trigger: CACACAATGCTCCTGGGTCCTAATGGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| 3UTR CCA 72 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATaGATATGGGTGCCAGTGTCCATTAGGACCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: GFAGCFIYTRDA*IWVPVSIRTQE Trigger: CTCCTGGGTCCTAATGGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| 3UTR CCA 72 bp | GCTGGGTGCTTTATTTATACAAGGGATGCATGGATATaGGTGCCAGTGTCCATTAGGACCCAGGAGCATTGT | + |
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Preference number: 3 (lower is better) Translates to: AGCFIYTRDAWI*VPVSIRTQEHC Trigger: ACAATGCTCCTGGGTCCTAATGGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCGGGCCACATTGCAGGTaGTGGTCTGGCTGGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PRLCWVLYLYKGCMDMGAGPHCR*WSGWAR Trigger: CCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCC...GGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGGGATGGGGAGGGCACTaGCCACCCGGAGAGTACTGT | + |
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Preference number: 4 (lower is better) Translates to: GFAGCFIYTRDAWIWVPVGWGGH*PPGEYC Trigger: ACAGTACTCTCCGGGTGGTCAGTGCCCTCCCCATCC...CACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGGTGCTGCTTGCCGGGTaGGCCACATTGCAGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: VPGFAGCFIYTRDAWIWVVLLAG*ATLQVM Trigger: CATCACCTGCAATGTGGCCCACCCGGCAAGCAGCAC...CACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGCCACTCATCCAGTCCTaGTGCTGGATGGGGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: GFAGCFIYTRDAWIWVPVPLIQS*CWMGRA Trigger: TGCCCTCCCCATCCAGCACCAGGACTGGATGAGTGG...CACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGCAGTCACTGAGCTGCTaGGGGTGTAGAGGCCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GFAGCFIYTRDAWIWVPVQSLSC*GCRGQT Trigger: AGTCTGGCCTCTACACCCTCAGCAGCTCAGTGACTG...CACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCCCACCACCACACATGTaGCCATGGGGCTCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LCWVLYLYKGCMDMGASVPPPHM*PWGSGR Trigger: TCTCCCTGAGCCCCATGGTCACATGTGTGGTGGTGG...GACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGCACTTTGGTGCTGCTTaGCGGGTGGGCCACATTGCA | + |
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Preference number: 4 (lower is better) Translates to: GFAGCFIYTRDAWIWVPVHFGAA*RVGHIA Trigger: TGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTG...CACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | GTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGTTGCAGGTGATGGTCTaGCTGGGCCAGGTGTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGFAGCFIYTRDAWIWVLQVMV*LGQVFE Trigger: CTCGAACACCTGGCCCAGCCAGACCATCACCTGCAA...CACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | TTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCCTCCACCCAAGAGGTCTaGAGCTGCGCATGGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FAGCFIYTRDAWIWVPVSSTQEV*SCAWGT Trigger: TGTCCCCCATGCGCAGCTCCAGACCTCTTGGGTGGA...GGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | GTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGAGAGCTGGGAAGGTGTaGACACCACTGGACAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: VPGFAGCFIYTRDAWIWVRAGKV*TPLDRD Trigger: ATCCCTGTCCAGTGGTGTGCACACCTTCCCAGCTCT...CACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCTGTCCACTTTGGTGCTaGTTGCCGGGTGGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: LCWVLYLYKGCMDMGASVCPLWC*LPGGPH Trigger: ATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACA...GACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | TTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCCCAAGAGGTCTGGAGCTaGGCATGGGGGACACTCTTT | + |
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Preference number: 4 (lower is better) Translates to: FAGCFIYTRDAWIWVPVSQEVWS*AWGTLF Trigger: AAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTG...GGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCATTTTCTTGTCCACTTTaGTGCTGCTTGCCGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: PGFAGCFIYTRDAWIWVPFSCPL*CCLPGG Trigger: CCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAA...TGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | TTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCCTCTTTGGAGGGAAGATaGAGACGGATGGTCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: FAGCFIYTRDAWIWVPVSSLEGR*RRMVHP Trigger: TGGGTGGACCATCCGTCTTCATCTTCCCTCCAAAGA...GGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | TTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCCCCAGGTCAAGGTCACTaGCTCAGGGAAATAACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FAGCFIYTRDAWIWVPVSPGQGH*LREITL Trigger: AAGGGTTATTTCCCTGAGCCAGTGACCTTGACCTGG...GGACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | TGGTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGCATCTCTTCTGCTGGTaGAGGCAAGACATATACCTG | + |
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Preference number: 4 (lower is better) Translates to: WSQALLGALFIQGMHGYGHLFCW*RQDIYL Trigger: CAGGTATATGTCTTGCCTCCACCAGCAGAAGAGATG...CCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR TCA 90 bp | ACATGGTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATCAGGGAAATAACCCTTaGCCAGGCATCCTAGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TWSQALLGALFIQGMHGYQGNNP*PGILES Trigger: TGACTCTAGGATGCCTGGTCAAGGGTTATTTCCCTG...ATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGACCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | GGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGCTTAGTCATCTCTTCTaGTGGTGGAGGCAAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: GFAGCFIYTRDAWIWVPVLSHLF*WWRQDI Trigger: TATGTCTTGCCTCCACCAGCAGAAGAGATGACTAAG...CACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR GCA 90 bp | GCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTAGAGTCCAGGACTGTTaGGGTGTTCTTGTAGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: ALLGALFIQGMHGYGCQCRVQDC*GVLVVL Trigger: CAAAACTACAAGAACACCGCAACAGTCCTGGACTCT...ACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | ACATGGTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATCAAGACATATACCTGTaGAGCTCTTACTGGCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TWSQALLGALFIQGMHGYQDIYL*SSYWPS Trigger: AGAGGGCCAGTAAGAGCTCCACAGGTATATGTCTTG...ATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGTGTCTACATCCTTGATCTTTaGAGGGAAGATGAAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: LCWVLYLYKGCMDMGASVYILDL*REDEDG Trigger: TCCGTCTTCATCTTCCCTCCAAAGATCAAGGATGTA...GACACTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS CCA 90 bp | ACTTTGGTGCTGCTTGCCGGGTGGGCCACATTGCAGGTGATGGTCTaGCTGGGCCAGGTGTTCGAGGTTACAGTCACTGAGCTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TLVLLAGWATLQVMV*LGQVFEVTVTELLR Trigger: CCTCAGCAGCTCAGTGACTGTAACCTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 90 bp | TCTTGTCCACTTTGGTGCTGCTTGCCGGGTGGGCCACATTGCAGGTaGTGGTCTGGCTGGGCCAGGTGTTCGAGGTTACAGTCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: SCPLWCCLPGGPHCR*WSGWARCSRLQSLS Trigger: GCTCAGTGACTGTAACCTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS GCA 90 bp | TATGGGCACTCTGGGCTCAATTTTCTTGTCCACTTTGGTGCTGCTTaGCGGGTGGGCCACATTGCAGGTGATGGTCTGGCTGGGCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: YGHSGLNFLVHFGAA*RVGHIAGDGLAGPG Trigger: ACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAATTGAGCCCAGAGTGCCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS GCA 90 bp | TGGAGGGAAGATGAAGACGGATGGTCCACCCAAGAGGTCTGGAGCTaGGCATGGGGGACACTCTTTGAGTGGAGGACAGGGGTTCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: WREDEDGWSTQEVWS*AWGTLFEWRTGVLC Trigger: ACACAGAACCCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGGGTGGACCATCCGTCTTCATCTTCCCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 90 bp | ACTCTGGGCTCAATTTTCTTGTCCACTTTGGTGCTGCTTGCCGGGTaGGCCACATTGCAGGTGATGGTCTGGCTGGGCCAGGTGTTCGAG | + |
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Preference number: 5 (lower is better) Translates to: TLGSIFLSTLVLLAG*ATLQVMVWLGQVFE Trigger: CTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAATTGAGCCCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 90 bp | GATCTTTGGAGGGAAGATGAAGACGGATGGTCCACCCAAGAGGTCTaGAGCTGCGCATGGGGGACACTCTTTGAGTGGAGGACAGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: DLWREDEDGWSTQEV*SCAWGTLFEWRTGV Trigger: AACCCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGGGTGGACCATCCGTCTTCATCTTCCCTCCAAAGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 90 bp | TCCAGGTCTAGCCCCAGAGACCGGGAGATGGTCTTAGTCGTAAGGTaGTTGTGCAGACCCTCGTGGACCACTGAGCAGGCGAAAAGACTT | + |
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Preference number: 5 (lower is better) Translates to: SRSSPRDREMVLVVR*LCRPSWTTEQAKRL Trigger: AAGTCTTTTCGCCTGCTCAGTGGTCCACGAGGGTCTGCACAATCACCTTACGACTAAGACCATCTCCCGGTCTCTGGGGCTAGACCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103416.9 |
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| CDS TCA 90 bp | ATCCAGAGTTCCAGGTCAAGGTCACTGGCTCAGGGAAATAACCCTTaGCCAGGCATCCTAGAGTCACCGAGGAGCCAGTTGTACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: IQSSRSRSLAQGNNP*PGILESPRSQLYLH Trigger: GTGGAGGTACAACTGGCTCCTCGGTGACTCTAGGATGCCTGGTCAAGGGTTATTTCCCTGAGCCAGTGACCTTGACCTGGAACTCTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGTGCTCTGTACGCCCATaGCTGGTCCAGTCCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPGFAGCFIYTRDAWIWVCSVRP*LVQSTA Trigger: TGCTGTGGACTGGACCAGCAATGGGCGTACAGAGCA...CACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS CCA 90 bp | CATGCAGGTCAGACTGAACTCTTTCTTAGTCATCTCTTCTGCTGGTaGAGGCAAGACATATACCTGTGGAGCTCTTACTGGCCCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: HAGQTELFLSHLFCW*RQDIYLWSSYWPSG Trigger: CCCAGAGGGCCAGTAAGAGCTCCACAGGTATATGTCTTGCCTCCACCAGCAGAAGAGATGACTAAGAAAGAGTTCAGTCTGACCTGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS-3UTR CAA 90 bp | GTCCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGATTTTCTTGTCCACTTaGGTGCTGCTTGCCGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: VPGFAGCFIYTRDAWIWVIFLST*VLLAGW Trigger: CCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAAT...CACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCAGGCTCTGTTGTTGACCTaGCATTTGAACTCCTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: QALLGALFIQGMHGYGCQALLLT*HLNSLP Trigger: TGGCAAGGAGTTCAAATGCAAGGTCAACAACAGAGC...CTGGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS-3UTR CAA 90 bp | CCCAGGCTTTGCTGGGTGCTTTATTTATACAAGGGATGCATGGATATGGGTGCCATCATGAGTACATCCTaGATCTTTGGAGGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: PRLCWVLYLYKGCMDMGAIMSTS*IFGGKM Trigger: CATCTTCCCTCCAAAGATCAAGGATGTACTCATGAT...GGCACCCATATCCATGCATCCCTTGTATAAATAAAGCACCCAGCAAAGCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195192.2 |
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| CDS TCA 72 bp | CTTTGGTGCTGCTTGCCGGGTGGGCCACATTGCAGGTaGTGGTCTGGCTGGGCCAGGTGTTCGAGGTTACAG | + |
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Preference number: 6 (lower is better) Translates to: LWCCLPGGPHCR*WSGWARCSRLQ Trigger: CTGTAACCTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 72 bp | CTGCTTGCCGGGTGGGCCACATTGCAGGTGATGGTCTaGCTGGGCCAGGTGTTCGAGGTTACAGTCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLAGWATLQVMV*LGQVFEVTVTE Trigger: CTCAGTGACTGTAACCTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 72 bp | GACGGATGGTCCACCCAAGAGGTCTGGAGCTGCGCATaGGGGACACTCTTTGAGTGGAGGACAGGGGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: DGWSTQEVWSCA*GTLFEWRTGVL Trigger: CAGAACCCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGGGTGGACCATCCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 72 bp | TTGTCCACTTTGGTGCTGCTTGCCGGGTGGGCCACATaGCAGGTGATGGTCTGGCTGGGCCAGGTGTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: LSTLVLLAGWAT*QVMVWLGQVFE Trigger: CTCGAACACCTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 72 bp | AGCCCCAGAGACCGGGAGATGGTCTTAGTCGTAAGGTaGTTGTGCAGACCCTCGTGGACCACTGAGCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SPRDREMVLVVR*LCRPSWTTEQA Trigger: CGCCTGCTCAGTGGTCCACGAGGGTCTGCACAATCACCTTACGACTAAGACCATCTCCCGGTCTCTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103416.9 |
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| CDS GCA 72 bp | GATGAAGACGGATGGTCCACCCAAGAGGTCTGGAGCTaGGCATGGGGGACACTCTTTGAGTGGAGGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: DEDGWSTQEVWS*AWGTLFEWRTG Trigger: CCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGGGTGGACCATCCGTCTTCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 72 bp | CCAAGAGGTCTGGAGCTGCGCATGGGGGACACTCTTTaGGTGGAGGACAGGGGTTCTGTGTTATGGGCACTC | + |
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Preference number: 6 (lower is better) Translates to: PRGLELRMGDTL*VEDRGSVLWAL Trigger: GAGTGCCCATAACACAGAACCCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 72 bp | CCCAAGAGGTCTGGAGCTGCGCATGGGGGACACTCTTaGAGTGGAGGACAGGGGTTCTGTGTTATGGGCACT | + |
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Preference number: 6 (lower is better) Translates to: PKRSGAAHGGHS*SGGQGFCVMGT Trigger: AGTGCCCATAACACAGAACCCCTGTCCTCCACTCAAAGAGTGTCCCCCATGCGCAGCTCCAGACCTCTTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 90 bp | GGAGGACAGGGGTTCTGTGTTATGGGCACTCTGGGCTCAATTTTCTaGTCCACTTTGGTGCTGCTTGCCGGGTGGGCCACATTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GGQGFCVMGTLGSIF*STLVLLAGWATLQV Trigger: CACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAATTGAGCCCAGAGTGCCCATAACACAGAACCCCTGTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 72 bp | TCAATTTTCTTGTCCACTTTGGTGCTGCTTGCCGGGTaGGCCACATTGCAGGTGATGGTCTGGCTGGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SIFLSTLVLLAG*ATLQVMVWLGQ Trigger: CTGGCCCAGCCAGACCATCACCTGCAATGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 72 bp | TCCAGGTCAAGGTCACTGGCTCAGGGAAATAACCCTTaGCCAGGCATCCTAGAGTCACCGAGGAGCCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSRSLAQGNNP*PGILESPRSQL Trigger: CAACTGGCTCCTCGGTGACTCTAGGATGCCTGGTCAAGGGTTATTTCCCTGAGCCAGTGACCTTGACCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 72 bp | GGGTTCTGTGTTATGGGCACTCTGGGCTCAATTTTCTaGTCCACTTTGGTGCTGCTTGCCGGGTGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GFCVMGTLGSIF*STLVLLAGWAT Trigger: TGTGGCCCACCCGGCAAGCAGCACCAAAGTGGACAAGAAAATTGAGCCCAGAGTGCCCATAACACAGAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS TCA 72 bp | AGTCGTAAGGTGATTGTGCAGACCCTCGTGGACCACTaGGCAGGCGAAAAGACTTCCTCTTTCCCAAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRKVIVQTLVDH*AGEKTSSFPSA Trigger: AGCACTTGGGAAAGAGGAAGTCTTTTCGCCTGCTCAGTGGTCCACGAGGGTCTGCACAATCACCTTACGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS GCA 72 bp | GCAGGTCAGACTGAACTCTTTCTTAGTCATCTCTTCTaGTGGTGGAGGCAAGACATATACCTGTGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AGQTELFLSHLF*WWRQDIYLWSS Trigger: AGAGCTCCACAGGTATATGTCTTGCCTCCACCAGCAGAAGAGATGACTAAGAAAGAGTTCAGTCTGACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 72 bp | CACCCGGAGAGTACTGTTGTAATCCTCTCTATGGGTTaGTGTCTGAGCTGTGTGTACTTCCACGTTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: HPESTVVILSMG*CLSCVYFHVVH Trigger: GTGAACAACGTGGAAGTACACACAGCTCAGACACAAACCCATAGAGAGGATTACAACAGTACTCTCCGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CCA 72 bp | CAGACTGAACTCTTTCTTAGTCATCTCTTCTGCTGGTaGAGGCAAGACATATACCTGTGGAGCTCTTACTGG | + |
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Preference number: 6 (lower is better) Translates to: QTELFLSHLFCW*RQDIYLWSSYW Trigger: CCAGTAAGAGCTCCACAGGTATATGTCTTGCCTCCACCAGCAGAAGAGATGACTAAGAAAGAGTTCAGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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| CDS CAA 72 bp | GCAGGCGAAAAGACTTCCTCTTTCCCAAGTGCTCTTTaGTACTCTGAGCTTGCTGTACATGAAGTAAGAACC | + |
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Preference number: 6 (lower is better) Translates to: AGEKTSSFPSAL*YSELAVHEVRT Trigger: GGTTCTTACTTCATGTACAGCAAGCTCAGAGTACAAAAGAGCACTTGGGAAAGAGGAAGTCTTTTCGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103416.9 ENSMUST00000195192.2 |
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