Pregenerated sensors for IGHG2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076613Ensembl transcript IDs: ENSMUST00000103418.3, ENSMUST00000192188.3
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAAGAGAAGACTGCATCTTCTTCAGAGGGCTCATCCCACCACTTTaGGGATCACAGGTCCTTTCCTCAGCCCAGGGTTCACAGAAGTAC | + |
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Preference number: 1 (lower is better) Translates to: GREDCIFFRGLIPPL*GSQVLSSAQGSQKY Trigger: GTACTTCTGTGAACCCTGGGCTGAGGAAAGGACCTGTGATCCTCAAAGTGGTGGGATGAGCCCTCTGAAGAAGATGCAGTCTTCTCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 90 bp | GTGTCTGTGGACTGGATTCTGTATCTGAGAACCCAGCATCTTGAGTaGGTAGGAGGAAGAGAAGACTGCATCTTCTTCAGAGGGCTCATC | + |
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Preference number: 1 (lower is better) Translates to: VSVDWILYLRTQHLE*VGGREDCIFFRGLI Trigger: GATGAGCCCTCTGAAGAAGATGCAGTCTTCTCTTCCTCCTACCCACTCAAGATGCTGGGTTCTCAGATACAGAATCCAGTCCACAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 90 bp | AGAGGTCCATTGCAACTAATGTTTTCTGCTGTGAGTGGTCCAATCTaGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: RGPLQLMFSAVSGPI*TPGLQSRPVAPWFS Trigger: AGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTGGACCACTCACAGCAGAAAACATTAGTTGCAATGGACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 90 bp | AACAGTGTCTGTGGACTGGATTCTGTATCTGAGAACCCAGCATCTTaGGTGGGTAGGAGGAAGAGAAGACTGCATCTTCTTCAGAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: NSVCGLDSVSENPAS*VGRRKRRLHLLQRA Trigger: AGCCCTCTGAAGAAGATGCAGTCTTCTCTTCCTCCTACCCACTCAAGATGCTGGGTTCTCAGATACAGAATCCAGTCCACAGACACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 90 bp | AAAGGATACCAGAGTGACCTTTGGGCTATTGTGACCCTGGCCTTCTaGGCAGATGTCTCCATTCAAGTATCTGAAAACATTGCCCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: KGYQSDLWAIVTLAF*ADVSIQVSENIALS Trigger: AGAAAGGGCAATGTTTTCAGATACTTGAATGGAGACATCTGCTCAGAAGGCCAGGGTCACAATAGCCCAAAGGTCACTCTGGTATCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 90 bp | AAAACATTGCCCTTTCTGGGAAGATCCATTTCAGATGAAAATGTGTaGTCCAGGCCAAATCCAGGGCTGATGTCAATGCAGCTGAACTCA | + |
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Preference number: 1 (lower is better) Translates to: KTLPFLGRSISDENV*SRPNPGLMSMQLNS Trigger: TGAGTTCAGCTGCATTGACATCAGCCCTGGATTTGGCCTGGACCACACATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 90 bp | GAACTCAGGAAACCTGGATTTCCAGTTCATCTTAGGCAAACATTCTaGGATCTCAGATCCCCTAGTGCTGGTTTGGATGGAGATGGTTAT | + |
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Preference number: 1 (lower is better) Translates to: ELRKPGFPVHLRQTF*DLRSPSAGLDGDGY Trigger: ATAACCATCTCCATCCAAACCAGCACTAGGGGATCTGAGATCTCAGAATGTTTGCCTAAGATGAACTGGAAATCCAGGTTTCCTGAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 90 bp | CAAGTATCTGAAAACATTGCCCTTTCTGGGAAGATCCATTTCAGATaGAAATGTGTGGTCCAGGCCAAATCCAGGGCTGATGTCAATGCA | + |
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Preference number: 1 (lower is better) Translates to: QVSENIALSGKIHFR*KCVVQAKSRADVNA Trigger: TGCATTGACATCAGCCCTGGATTTGGCCTGGACCACACATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTCAGATACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 90 bp | TATTGTGACCCTGGCCTTCTGAGCAGATGTCTCCATTCAAGTATCTaGAAACATTGCCCTTTCTGGGAAGATCCATTTCAGATGAAAATG | + |
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Preference number: 1 (lower is better) Translates to: YCDPGLLSRCLHSSI*KHCPFWEDPFQMKM Trigger: CATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTCAGATACTTGAATGGAGACATCTGCTCAGAAGGCCAGGGTCACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCCAGGGTTCACAGAAGTACCAGGAAGGAAGCTGTCCAAGTATAGCTGGGCCTCCCTGTTAGGCTaGACAGTAGGATGGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: LSPGFTEVPGRKLSKYSWASLLG*TVGWMG Trigger: GCCCATCCATCCTACTGTGCAGCCTAACAGGGAGGC...CCAGCTATACTTGGACAGCTTCCTTCCTGGTACTTCTGTGAACCCTGGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTCCAATCTGGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTACCCAGCATCTTGAGTaGGTAGGAGGAAGAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SGPIWTPGLQSRPVAPWFTQHLE*VGGRED Trigger: GTCTTCTCTTCCTCCTACCCACTCAAGATGCTGGGT...AAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTGGACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CAA 90 bp | ACACAAAGCAGTCCTTCTGCCTCTGGAGGTGGCAGTGGCCTTGTCTaGAAGTTCTGTGGACAACAGTGTCTGTGGACTGGATTCTGTATC | + |
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Preference number: 2 (lower is better) Translates to: TQSSPSASGGGSGLV*KFCGQQCLWTGFCI Trigger: GATACAGAATCCAGTCCACAGACACTGTTGTCCACAGAACTTCAAGACAAGGCCACTGCCACCTCCAGAGGCAGAAGGACTGCTTTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR TCA 90 bp | GAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACTTTTCCTGCCTGCTTAGGCAAACATTCTaGGATCTCAGATCCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: EPNRNLLIRALTWNFSCLLRQTF*DLRSPS Trigger: ACTAGGGGATCTGAGATCTCAGAATGTTTGCCTAAG...CAGGCAGGAAAAGTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | TCAAATTCCAAAAGAACAGCATGCATGAGTGTGCACCTGTGCGCGCCCGCATGTTCAGATGAAAATGTGTaGTCCAGGCCAAATCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SNSKRTACMSVHLCAPACSDENV*SRPNPG Trigger: CCCTGGATTTGGCCTGGACCACACATTTTCATCTGA...ACATGCGGGCGCGCACAGGTGCACACTCATGCATGCTGTTCTTTTGGAATTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | CAATCTGGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTTCTTTTAATCAGAGCCCTCACCTaGAACTTTTCCTGCCTGATT | + |
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Preference number: 2 (lower is better) Translates to: QSGHQAFRADLWHHGFLLIRALT*NFSCLI Trigger: AATCAGGCAGGAAAAGTTCCAGGTGAGGGCTCTGAT...TAAAAGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR TCA 90 bp | CCCCATTTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACACTGGATTCTGTATCTaGGAACCCAGCATCTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: PHFIEPNRNLLIRALTWNTGFCI*EPSILS Trigger: ACTCAAGATGCTGGGTTCTCAGATACAGAATCCAGT...GTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAAATGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACTTTTCCTGCCTGGATCAGTTAGTTATTTaGCAACTGCTGTGGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: EPNRNLLIRALTWNFSCLDQLVI*QLLWKC Trigger: ACACTTCCACAGCAGTTGCCAAATAACTAACTGATC...CAGGCAGGAAAAGTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CAA 90 bp | CCCTGGCCTTCTGAGCAGATGTCTCCATTCAAGTATCTGAAAACATaGCCCTTTCTGGGAAGATCCATTTCAGATGAAAATGTGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PWPSEQMSPFKYLKT*PFLGRSISDENVWS Trigger: GGACCACACATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTCAGATACTTGAATGGAGACATCTGCTCAGAAGGCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | TGTCCTAGGCAGGTAGAAGAGGAAAGGATACAGGGCTACTTTCCATTAGCTAAAATTTGGCAACTGCTGTaGAAGTGTTTAGGTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CPRQVEEERIQGYFPLAKIWQLL*KCLGLG Trigger: CCCCAGACCTAAACACTTCCACAGCAGTTGCCAAAT...TTTAGCTAATGGAAAGTAGCCCTGTATCCTTTCCTCTTCTACCTGCCTAGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCTCTCTAAACATTTCCTATCAGACCCATTAAAGCAAAAGCAAGTGCGTGCTTTCTGCCTCTGGAGGTaGCAGTGGCCTTGTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: KLSKHFLSDPLKQKQVRAFCLWR*QWPCLE Trigger: TTCAAGACAAGGCCACTGCCACCTCCAGAGGCAGAA...AGCACGCACTTGCTTTTGCTTTAATGGGTCTGATAGGAAATGTTTAGAGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCTCTCTAAACATTTCCTATCAGACCCATTAAAGCAAAAGCAAGTGCGTGCTAAGATCCATTTCAGATaGAAATGTGTGGTCCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KLSKHFLSDPLKQKQVRAKIHFR*KCVVQA Trigger: GGCCTGGACCACACATTTTCATCTGAAATGGATCTT...AGCACGCACTTGCTTTTGCTTTAATGGGTCTGATAGGAAATGTTTAGAGAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAGAGGGAGAGAGAACACTTTAAGACATTCATGACCTCTAGAAAAATCCTCCATTCAAGTATCTaGAAACATTGCCCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: EREREREHFKTFMTSRKILHSSI*KHCPFW Trigger: CCAGAAAGGGCAATGTTTTCAGATACTTGAATGGAG...GATTTTTCTAGAGGTCATGAATGTCTTAAAGTGTTCTCTCTCCCTCTCTCTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | GTCCTTCTGCCTCTGGAGGTGGCAGTGGCCTTGTCTTaGAGTTCTGTGGACAACAGTGTCTGTGGACTGGAT | + |
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Preference number: 3 (lower is better) Translates to: VLLPLEVAVALS*SSVDNSVCGLD Trigger: ATCCAGTCCACAGACACTGTTGTCCACAGAACTTCAAGACAAGGCCACTGCCACCTCCAGAGGCAGAAGGAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | GCCTGCTCTGCACATGGTCCTTCAAAGGAGAGACCATaGAGAGTTCTGGATCAGAGAGTCATAGGGCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: ACSAHGPSKERP*RVLDQRVIGLE Trigger: CTCTAGCCCTATGACTCTCTGATCCAGAACTCTCCATGGTCTCTCCTTTGAAGGACCATGTGCAGAGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR-3UTR CAA 90 bp | ACTAATGTTTTCTGCTGTGAGTGGTCCAATCTGGACACCAGGCCTTCAGAGCAGGCTCATCCCACCACTTaGAGGATCACAGGTCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: TNVFCCEWSNLDTRPSEQAHPTT*RITGPF Trigger: GAAAGGACCTGTGATCCTCAAAGTGGTGGGATGAGC...CTGCTCTGAAGGCCTGGTGTCCAGATTGGACCACTCACAGCAGAAAACATTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | TACACAAAGCAGTCCTTCTGCCTCTGGAGGTGGCAGTaGCCTTGTCTTGAAGTTCTGTGGACAACAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: YTKQSFCLWRWQ*PCLEVLWTTVS Trigger: AGACACTGTTGTCCACAGAACTTCAAGACAAGGCCACTGCCACCTCCAGAGGCAGAAGGACTGCTTTGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | GGTACAAAGGATACCAGAGTGACCTTTGGGCTATTGTaGCCCTGGCCTTCTGAGCAGATGTCTCCATTCAAG | + |
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Preference number: 3 (lower is better) Translates to: GTKDTRVTFGLL*PWPSEQMSPFK Trigger: CTTGAATGGAGACATCTGCTCAGAAGGCCAGGGTCACAATAGCCCAAAGGTCACTCTGGTATCCTTTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | CTTTTATTGTTTCAAATTCCAAAAGAACAGCATGCATaGGTGTGCACCTGTGCGCGCCCGCATGTGCACGCA | + |
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Preference number: 3 (lower is better) Translates to: LLLFQIPKEQHA*VCTCARPHVHA Trigger: TGCGTGCACATGCGGGCGCGCACAGGTGCACACTCATGCATGCTGTTCTTTTGGAATTTGAAACAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | CCCTTTCTGGGAAGATCCATTTCAGATGAAAATGTGTaGTCCAGGCCAAATCCAGGGCTGATGTCAATGCAG | + |
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Preference number: 3 (lower is better) Translates to: PFLGRSISDENV*SRPNPGLMSMQ Trigger: CTGCATTGACATCAGCCCTGGATTTGGCCTGGACCACACATTTTCATCTGAAATGGATCTTCCCAGAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | GTCCAATCTGGACACCAGGCCTTCAGAGCAGACCTGTaGCACCATGGTTTTCTTTTAACTATGTGCTCACAT | + |
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Preference number: 3 (lower is better) Translates to: VQSGHQAFRADL*HHGFLLTMCSH Trigger: ATGTGAGCACATAGTTAAAAGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | TTCTCATCAGAGCCCTCACCTGGAACTTTTCCTGCCTaGTTACCTAGCCAGTACTCAGTGGTGTATACACTT | + |
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Preference number: 3 (lower is better) Translates to: FSSEPSPGTFPA*LPSQYSVVYTL Trigger: AAGTGTATACACCACTGAGTACTGGCTAGGTAATCAGGCAGGAAAAGTTCCAGGTGAGGGCTCTGATGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | GACTGGATTCTGTATCTGAGAACCCAGCATCTTGAGTaGGTAGGAGGAAGAGAAGACTGCATCTTCTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: DWILYLRTQHLE*VGGREDCIFFR Trigger: TCTGAAGAAGATGCAGTCTTCTCTTCCTCCTACCCACTCAAGATGCTGGGTTCTCAGATACAGAATCCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | GAACTTTTCCTGCCTGATTACCTAGCCAGTACTCAGTaGTGTATACACTTGTCCCTGCTAGAGCTTTGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ELFLPDYLASTQ*CIHLSLLELCE Trigger: CTCACAAAGCTCTAGCAGGGACAAGTGTATACACCACTGAGTACTGGCTAGGTAATCAGGCAGGAAAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | GAAAACATTGCCCTTTCTGGGAAGATCCATTTCAGATaGAAATGTGTGGTCCAGGCCAAATCCAGGGCTGAT | + |
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Preference number: 3 (lower is better) Translates to: ENIALSGKIHFR*KCVVQAKSRAD Trigger: ATCAGCCCTGGATTTGGCCTGGACCACACATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | CCTGGCCTTCTGAGCAGATGTCTCCATTCAAGTATCTaGAAACATTGCCCTTTCTGGGAAGATCCATTTCAG | + |
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Preference number: 3 (lower is better) Translates to: PGLLSRCLHSSI*KHCPFWEDPFQ Trigger: CTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTCAGATACTTGAATGGAGACATCTGCTCAGAAGGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CCA 72 bp | ACAGAAGTACCAGGAAGGAAGCTGTCCAAGTATAGCTaGTACAAAGGATACCAGAGTGACCTTTGGGCTATT | + |
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Preference number: 3 (lower is better) Translates to: TEVPGRKLSKYS*YKGYQSDLWAI Trigger: AATAGCCCAAAGGTCACTCTGGTATCCTTTGTACCAGCTATACTTGGACAGCTTCCTTCCTGGTACTTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR TCA 72 bp | AAACCTGGATTTCCAGTTCATCTTAGGCAAACATTCTaGGATCTCAGATCCCCTAGTGCTGGTTTGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: KPGFPVHLRQTF*DLRSPSAGLDG Trigger: TCCATCCAAACCAGCACTAGGGGATCTGAGATCTCAGAATGTTTGCCTAAGATGAACTGGAAATCCAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR GCA 72 bp | TTTCCTATCAGACCCATTAAAGCAAAAGCAAGTGCGTaGTCTTTCTTTCTGTCTGGAGACTCTGGCTTCTTA | + |
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Preference number: 3 (lower is better) Translates to: FPIRPIKAKASA*SFFLSGDSGFL Trigger: TAAGAAGCCAGAGTCTCCAGACAGAAAGAAAGAGCACGCACTTGCTTTTGCTTTAATGGGTCTGATAGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | CCCCATTTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACGTGCTGCTGGCTGGGTaGGCAACGCTGCAGGTGACG | + |
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Preference number: 4 (lower is better) Translates to: PHFIEPNRNLLIRALTWNVLLAG*ATLQVT Trigger: CGTCACCTGCAGCGTTGCTCACCCAGCCAGCAGCAC...GTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAAATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | TTCCTGCCTGATTACCTAGCCAGTACTCAGTGGTGTATACACTTGTCCCTGCTACTGCAGGTGACGGTCTaGCTTGGCCAGGTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLPDYLASTQWCIHLSLLLQVTV*LGQVLE Trigger: CTCCAGCACCTGGCCAAGTCAGACCGTCACCTGCAG...TAGCAGGGACAAGTGTATACACCACTGAGTACTGGCTAGGTAATCAGGCAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CCA 90 bp | CAATCTGGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTTCTTTTAGACTTGGCCAGGTGCTaGAGGGGACAGTCACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QSGHQAFRADLWHHGFLLDLARC*RGQSLS Trigger: GCTCAGTGACTGTCCCCTCCAGCACCTGGCCAAGTC...TAAAAGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CAA 72 bp | AGTCCTTCTGCCTCTGGAGGTGGCAGTGGCCTTGTCTaGAAGTTCTGTGGACAACAGTGTCTGTGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPSASGGGSGLV*KFCGQQCLWTG Trigger: TCCAGTCCACAGACACTGTTGTCCACAGAACTTCAAGACAAGGCCACTGCCACCTCCAGAGGCAGAAGGACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | AGTGGTCCAATCTGGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTGGTTCTCTCGATGGGTaGTGGGAGGTCTTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: SGPIWTPGLQSRPVAPWFGSLDG*WEVFVV Trigger: AACAACAAAGACCTCCCATCACCCATCGAGAGAACC...AAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTGGACCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGCTGATGTCAATGCAGCTGAACTCAGGAAACCTGGATTTCCAGTTCATCGGAGCTGGGCATTTGTaGCACTCCTTGCATGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PGLMSMQLNSGNLDFQFIGAGHL*HSLHGG Trigger: TCCTCCATGCAAGGAGTGTCACAAATGCCCAGCTCC...GATGAACTGGAAATCCAGGTTTCCTGAGTTCAGCTGCATTGACATCAGCCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | GCCTTCAGAGCAGACCTGTGGCACCATGGTTTTCTTTTAACTATGTGCTCACATCCACCACCACACACGTaGCCTTGGGTGTCAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: AFRADLWHHGFLLTMCSHPPPHT*PWVSGR Trigger: TCTCCCTGACACCCAAGGTCACGTGTGTGGTGGTGG...ATGTGAGCACATAGTTAAAAGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR GCA 90 bp | CCCCATTTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACGGAAGGTGTGCACACTaGTGGACAGGGATCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PHFIEPNRNLLIRALTWNGRCAH*WTGIQS Trigger: ACTCTGGATCCCTGTCCAGCAGTGTGCACACCTTCC...GTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAAATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | CCAGGGCTGATGTCAATGCAGCTGAACTCAGGAAACCTGGATTTCCAGTTCATCGGCCAGTGGATAGACTaGTGGGGGTGTTGTTTTGGN | + |
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Preference number: 4 (lower is better) Translates to: PGLMSMQLNSGNLDFQFIGQWID*WGCCFG Trigger: NCCAAAACAACACCCCCATCAGTCTATCCACTGGCC...GATGAACTGGAAATCCAGGTTTCCTGAGTTCAGCTGCATTGACATCAGCCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | CTCAGCCCAGGGTTCACAGAAGTACCAGGAAGGAAGCTGTCCAAGTATAGCTGGCGAGCTTGCTGTATATaGAGTAAGAACCGTCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSPGFTEVPGRKLSKYSWRACCI*SKNRQS Trigger: ACTCTGACGGTTCTTACTTCATATACAGCAAGCTCG...CCAGCTATACTTGGACAGCTTCCTTCCTGGTACTTCTGTGAACCCTGGGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CCA 90 bp | GAGAGAGAGAGGGAGAGAGAACACTTTAAGACATTCATGACCTCTAGAAAAATCGGTGACGGTCTGACTTaGCCAGGTGCTGGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EREREREHFKTFMTSRKIGDGLT*PGAGGD Trigger: GTCCCCTCCAGCACCTGGCCAAGTCAGACCGTCACC...GATTTTTCTAGAGGTCATGAATGTCTTAAAGTGTTCTCTCTCCCTCTCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CCA 90 bp | TTCCTGCCTGATTACCTAGCCAGTACTCAGTGGTGTATACACTTGTCCCTGCTACCAGCTCCCCATCCTTaGCCTCAGCACAGATATCAT | + |
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Preference number: 4 (lower is better) Translates to: FLPDYLASTQWCIHLSLLPAPHP*PQHRYH Trigger: ATGATATCTGTGCTGAGGCCAAGGATGGGGAGCTGG...TAGCAGGGACAAGTGTATACACCACTGAGTACTGGCTAGGTAATCAGGCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CAA 72 bp | CCTGATTACCTAGCCAGTACTCAGTGGTGTATACACTaGTCCCTGCTAGAGCTTTGTGAGGCTACACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: PDYLASTQWCIH*SLLELCEATQS Trigger: GCTTTGTGTAGCCTCACAAAGCTCTAGCAGGGACAAGTGTATACACCACTGAGTACTGGCTAGGTAATCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | TTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACTTTTCCCTATGGGTTTGTGTCTaGGCTGTGTGTACTTCCACG | + |
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Preference number: 4 (lower is better) Translates to: FIEPNRNLLIRALTWNFSLWVCV*AVCTST Trigger: CGTGGAAGTACACACAGCTCAGACACAAACCCATAG...GGAAAAGTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR GCA 90 bp | TGTCCTAGGCAGGTAGAAGAGGAAAGGATACAGGGCTACTTTCCATTAGCTAAATCAGGGGAGATCTTCTaGTTCAGCTCCACCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: CPRQVEEERIQGYFPLAKSGEIF*FSSTTE Trigger: CTCAGTGGTGGAGCTGAAGCAGAAGATCTCCCCTGA...TTTAGCTAATGGAAAGTAGCCCTGTATCCTTTCCTCTTCTACCTGCCTAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CCA 90 bp | AGATCCATTTCAGATGAAAATGTGTGGTCCAGGCCAAATCCAGGGCTGATGTCAGTGACACTCCTTGCATaGAGGACAGGGGTTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: RSISDENVWSRPNPGLMSVTLLA*RTGVDC Trigger: ACAATCAACCCCTGTCCTCCATGCAAGGAGTGTCAC...TGACATCAGCCCTGGATTTGGCCTGGACCACACATTTTCATCTGAAATGGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CCA 90 bp | TCAAATTCCAAAAGAACAGCATGCATGAGTGTGCACCTGTGCGCGCCCGCATGTTACATCCTTGATATTTaGAGGGAAGATGAAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: SNSKRTACMSVHLCAPACYILDI*REDEDG Trigger: TCCGTCTTCATCTTCCCTCCAAATATCAAGGATGTA...ACATGCGGGCGCGCACAGGTGCACACTCATGCATGCTGTTCTTTTGGAATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR TCA 90 bp | AAACATTCTGAGATCTCAGATCCCCTAGTGCTGGTTTGGATGGAGATGGTTATTTATTTGGAGGGAAGATaGAGACGGATGGTCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: KHSEISDPLVLVWMEMVIYLEGR*RRMVHP Trigger: AGGGTGGACCATCCGTCTTCATCTTCCCTCCAAATA...AATAACCATCTCCATCCAAACCAGCACTAGGGGATCTGAGATCTCAGAATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| 3UTR CAA 72 bp | TCTGAGCAGATGTCTCCATTCAAGTATCTGAAAACATaGCCCTTTCTGGGAAGATCCATTTCAGATGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: SEQMSPFKYLKT*PFLGRSISDEN Trigger: ATTTTCATCTGAAATGGATCTTCCCAGAAAGGGCAATGTTTTCAGATACTTGAATGGAGACATCTGCTCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS TCA 90 bp | GCAGGTGACGGTCTGACTTGGCCAGGTGCTGGAGGGGACAGTCACTaGGCTGCTCATAGTGTAGAGTCCAGACTGCAGGAGAGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: AGDGLTWPGAGGDSH*AAHSVESRLQESWE Trigger: TTCCCAGCTCTCCTGCAGTCTGGACTCTACACTATGAGCAGCTCAGTGACTGTCCCCTCCAGCACCTGGCCAAGTCAGACCGTCACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CCA 90 bp | TGGAGGGAAGATGAAGACGGATGGTCCACCCTCGAGGTTAGGAGCTaGGCATTTGTGACACTCCTTGCATGGAGGACAGGGGTTGATTGT | + |
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Preference number: 5 (lower is better) Translates to: WREDEDGWSTLEVRS*AFVTLLAWRTGVDC Trigger: ACAATCAACCCCTGTCCTCCATGCAAGGAGTGTCACAAATGCCCAGCTCCTAACCTCGAGGGTGGACCATCCGTCTTCATCTTCCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TGTGTGGTCCAGGCCAAATCCAGGGCTGATGTCAATGCAGCTGAACTCAGGAAATCACAGAGGAACCAGTaGTATCTCCACACCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: CVVQAKSRADVNAAELRKSQRNQ*YLHTQG Trigger: CCCCTGGGTGTGGAGATACAACTGGTTCCTCTGTGA...TTTCCTGAGTTCAGCTGCATTGACATCAGCCCTGGATTTGGCCTGGACCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | CAATCTGGACACCAGGCCTTCAGAGCAGACCTGTGGCACCATGGTTTTCTTTTACATGGAGGACAGGGGTaGATTGTTGAAATGGGCCCG | + |
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Preference number: 5 (lower is better) Translates to: QSGHQAFRADLWHHGFLLHGGQG*IVEMGP Trigger: CGGGCCCATTTCAACAATCAACCCCTGTCCTCCATG...TAAAAGAAAACCATGGTGCCACAGGTCTGCTCTGAAGGCCTGGTGTCCAGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCAGGGTTCACAGAAGTACCAGGAAGGAAGCTGTCCAAGTATAGCTGGATCATGAGTACATCCTaGATATTTGGAGGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: LSPGFTEVPGRKLSKYSWIMSTS*IFGGKM Trigger: CATCTTCCCTCCAAATATCAAGGATGTACTCATGAT...CCAGCTATACTTGGACAGCTTCCTTCCTGGTACTTCTGTGAACCCTGGGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACTTTTCCATCCTCTCTATGGGTTaGTGTCTGAGCTGTGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: FIEPNRNLLIRALTWNFSILSMG*CLSCVY Trigger: GTACACACAGCTCAGACACAAACCCATAGAGAGGAT...GGAAAAGTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TGTGTGGTCCAGGCCAAATCCAGGGCTGATGTCAATGCAGCTGAACTCAGGAAATTTTCTCCCACTTGCTaGTTTTTATATCGAGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: CVVQAKSRADVNAAELRKFSPTC*FLYRAC Trigger: GCAAGCTCGATATAAAAACAAGCAAGTGGGAGAAAA...TTTCCTGAGTTCAGCTGCATTGACATCAGCCCTGGATTTGGCCTGGACCACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TCAAATTCCAAAAGAACAGCATGCATGAGTGTGCACCTGTGCGCGCCCGCATGTTCTGTTTTCTCCCACTaGCTTGTTTTTATATCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SNSKRTACMSVHLCAPACSVFSH*LVFISS Trigger: GCTCGATATAAAAACAAGCAAGTGGGAGAAAACAGA...ACATGCGGGCGCGCACAGGTGCACACTCATGCATGCTGTTCTTTTGGAATTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TTTATTGAGCCCAACAGGAATCTTCTCATCAGAGCCCTCACCTGGAACTTTTCCTCTTTGTTGTTGACCTaGCATTTGAACTCCTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: FIEPNRNLLIRALTWNFSSLLLT*HLNSLP Trigger: TGGCAAGGAGTTCAAATGCAAGGTCAACAACAAAGA...GGAAAAGTTCCAGGTGAGGGCTCTGATGAGAAGATTCCTGTTGGGCTCAATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TGTCCTAGGCAGGTAGAAGAGGAAAGGATACAGGGCTACTTTCCATTAGCTAAAGATGGGAGGTCTTTGTaGTTGACCTTGCATTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: CPRQVEEERIQGYFPLAKDGRSL*LTLHLN Trigger: GTTCAAATGCAAGGTCAACAACAAAGACCTCCCATC...TTTAGCTAATGGAAAGTAGCCCTGTATCCTTTCCTCTTCTACCTGCCTAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS-3UTR CAA 90 bp | TCTAAACATTTCCTATCAGACCCATTAAAGCAAAAGCAAGTGCGTGCTCTTTCTTTGTTGACCTTGCATTaGAACTCCTTGCCACTCATC | + |
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Preference number: 5 (lower is better) Translates to: SKHFLSDPLKQKQVRALSLLTLH*NSLPLI Trigger: GATGAGTGGCAAGGAGTTCAAATGCAAGGTCAACAA...AGAAAGAGCACGCACTTGCTTTTGCTTTAATGGGTCTGATAGGAAATGTTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192188.3 |
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| CDS TCA 72 bp | GGTCTGACTTGGCCAGGTGCTGGAGGGGACAGTCACTaGGCTGCTCATAGTGTAGAGTCCAGACTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GLTWPGAGGDSH*AAHSVESRLQE Trigger: CTCCTGCAGTCTGGACTCTACACTATGAGCAGCTCAGTGACTGTCCCCTCCAGCACCTGGCCAAGTCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS TCA 72 bp | GATGGTCCACCCTCGAGGTTAGGAGCTGGGCATTTGTaGCACTCCTTGCATGGAGGACAGGGGTTGATTGTT | + |
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Preference number: 6 (lower is better) Translates to: DGPPSRLGAGHL*HSLHGGQGLIV Trigger: AACAATCAACCCCTGTCCTCCATGCAAGGAGTGTCACAAATGCCCAGCTCCTAACCTCGAGGGTGGACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS TCA 72 bp | GGCATTTGTGACACTCCTTGCATGGAGGACAGGGGTTaGTTGTTGAAATGGGCCCGCTGGGCTCAAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: GICDTPCMEDRG*LLKWARWAQVF Trigger: AAAAACTTGAGCCCAGCGGGCCCATTTCAACAATCAACCCCTGTCCTCCATGCAAGGAGTGTCACAAATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS GCA 72 bp | GCAAGTGAGACTGACATCTTTCCTGGACAACTGCTCTaGTGGTGGCGGCAAGATGTATACTTGTGGAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ASETDIFPGQLL*WWRQDVYLWSS Trigger: AGAGCTCCACAAGTATACATCTTGCCGCCACCAGCAGAGCAGTTGTCCAGGAAAGATGTCAGTCTCACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS GCA 72 bp | ACCAGGCAAGTGAGACTGACATCTTTCCTGGACAACTaGTCTGCTGGTGGCGGCAAGATGTATACTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: TRQVRLTSFLDN*SAGGGKMYTCG Trigger: TCCACAAGTATACATCTTGCCGCCACCAGCAGAGCAGTTGTCCAGGAAAGATGTCAGTCTCACTTGCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CAA 72 bp | CTCTCGATGGGTGATGGGAGGTCTTTGTTGTTGACCTaGCATTTGAACTCCTTGCCACTCATCCAGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSMGDGRSLLLT*HLNSLPLIQSW Trigger: CCAGGACTGGATGAGTGGCAAGGAGTTCAAATGCAAGGTCAACAACAAAGACCTCCCATCACCCATCGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CCA 72 bp | TACATCCTTGATATTTGGAGGGAAGATGAAGACGGATaGTCCACCCTCGAGGTTAGGAGCTGGGCATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: YILDIWREDEDG*STLEVRSWAFV Trigger: CACAAATGCCCAGCTCCTAACCTCGAGGGTGGACCATCCGTCTTCATCTTCCCTCCAAATATCAAGGATGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS GCA 72 bp | GTATATGAAGTAAGAACCGTCAGAGTCCAGGACTGGTaGGGTGTCCTTGTAGTTCTCCTCTGTATGCCCATT | + |
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Preference number: 6 (lower is better) Translates to: VYEVRTVRVQDW*GVLVVLLCMPI Trigger: AATGGGCATACAGAGGAGAACTACAAGGACACCGCACCAGTCCTGGACTCTGACGGTTCTTACTTCATATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CAA 72 bp | ATGGTTCTCTCGATGGGTGATGGGAGGTCTTTGTTGTaGACCTTGCATTTGAACTCCTTGCCACTCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: MVLSMGDGRSLL*TLHLNSLPLIQ Trigger: CTGGATGAGTGGCAAGGAGTTCAAATGCAAGGTCAACAACAAAGACCTCCCATCACCCATCGAGAGAACCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CAA 72 bp | CACCCGGATAGTACTGTTGTAATCCTCTCTATGGGTTaGTGTCTGAGCTGTGTGTACTTCCACGTTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: HPDSTVVILSMG*CLSCVYFHVVH Trigger: GTGAACAACGTGGAAGTACACACAGCTCAGACACAAACCCATAGAGAGGATTACAACAGTACTATCCGGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS CAA 90 bp | CCTTTAATTTTTGAGATGGTTCTCTCGATGGGTGATGGGAGGTCTTaGTTGTTGACCTTGCATTTGAACTCCTTGCCACTCATCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PLIFEMVLSMGDGRS*LLTLHLNSLPLIQS Trigger: GGACTGGATGAGTGGCAAGGAGTTCAAATGCAAGGTCAACAACAAAGACCTCCCATCACCCATCGAGAGAACCATCTCAAAAATTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS GCA 72 bp | TCAGGTAGTAATTTTTCAGACCCTCGTGTCTCACGTTaGATGAGAAGGAATCTGTTTTCTCCCACTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SGSNFSDPRVSR*MRRNLFSPTCL Trigger: CAAGCAAGTGGGAGAAAACAGATTCCTTCTCATGCAACGTGAGACACGAGGGTCTGAAAAATTACTACCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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| CDS TCA 72 bp | GTAGTAATTTTTCAGACCCTCGTGTCTCACGTTGCATaGGAAGGAATCTGTTTTCTCCCACTTGCTTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VVIFQTLVSHVA*EGICFLPLACF Trigger: AAAACAAGCAAGTGGGAGAAAACAGATTCCTTCTCATGCAACGTGAGACACGAGGGTCTGAAAAATTACTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103418.3 ENSMUST00000192188.3 |
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