Pregenerated sensors for IGHG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000076614Ensembl transcript IDs: ENSMUST00000103420.3, ENSMUST00000194304.6
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCAATTGGAACCTGCTCCTCAGGTCCCTCTCCAGGAGGTCCTTGTaGTCACCCAATCCCTGCTCAGTGGCCTCTGCCCCCTCTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: PNWNLLLRSLSRRSL*SPNPCSVASAPSRA Trigger: AGCCCTAGAGGGGGCAGAGGCCACTGAGCAGGGATTGGGTGATCACAAGGACCTCCTGGAGAGGGACCTGAGGAGCAGGTTCCAATTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 90 bp | GGTCCCTCTCCAGGAGGTCCTTGTGATCACCCAATCCCTGCTCAGTaGCCTCTGCCCCCTCTAGGGCTACACAAAGGCCTCAAAGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: GPSPGGPCDHPIPAQ*PLPPLGLHKGLKVP Trigger: TGGGACTTTGAGGCCTTTGTGTAGCCCTAGAGGGGGCAGAGGCCACTGAGCAGGGATTGGGTGATCACAAGGACCTCCTGGAGAGGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR GCA 90 bp | GCCTTGAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTaGTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: ALSPWRSFCQSREGR*SPFISTFLFLGGGD Trigger: GTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTCAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 90 bp | GACTCTGATTTCTCATTGGCTGAGAAGCAATGGAGAAACAGGCATTaGACCTGTGTAGTAGACTCACTCCACCCTCCAGTAGCCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: DSDFSLAEKQWRNRH*TCVVDSLHPPVACG Trigger: GCCACAGGCTACTGGAGGGTGGAGTGAGTCTACTACACAGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAAATCAGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 90 bp | CTCCAGCTAGCTACTGTAAGAGTCCTGGGCTGTAAGAGTCATGTCTaGAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: LQLATVRVLGCKSHV*RTRLLYHGSFQHPS Trigger: TGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTACAGCCCAGGACTCTTACAGTAGCTAGCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 90 bp | AGGTGGTGTGGACAGGGCTGGTACCACTTTTTGTCCCTTCTCAGCTaGACACTGACATTGTGGGAACTTGTCACTTCTTCAGTGATTGCT | + |
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Preference number: 1 (lower is better) Translates to: RWCGQGWYHFLSLLS*TLTLWELVTSSVIA Trigger: AGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTACCAGCCCTGTCCACACCACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR GCA 90 bp | CTTCATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTaGTCCTCAGGTCCCTCTCCAGGAGGTCCTTGTGATCACCCAATC | + |
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Preference number: 1 (lower is better) Translates to: LHLYCCSSFFGPIGT*SSGPSPGGPCDHPI Trigger: GATTGGGTGATCACAAGGACCTCCTGGAGAGGGACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 90 bp | GGCTGGTACCACTTTTTGTCCCTTCTCAGCTGGACACTGACATTGTaGGAACTTGTCACTTCTTCAGTGATTGCTCGTTTGTCCCAACAG | + |
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Preference number: 1 (lower is better) Translates to: GWYHFLSLLSWTLTL*ELVTSSVIARLSQQ Trigger: CTGTTGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTACCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 90 bp | TTTCTTGGAGGTGGAGACTCTGATTTCTCATTGGCTGAGAAGCAATaGAGAAACAGGCATTGGACCTGTGTAGTAGACTCACTCCACCCT | + |
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Preference number: 1 (lower is better) Translates to: FLGGGDSDFSLAEKQ*RNRHWTCVVDSLHP Trigger: AGGGTGGAGTGAGTCTACTACACAGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAAATCAGAGTCTCCACCTCCAAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 90 bp | TTCTTCAGTGATTGCTCGTTTGTCCCAACAGTTTGGATATACTGTTaGGGAAACTATTGCCCTTGTGGGTCTATCCAGTGTCTTTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: FFSDCSFVPTVWIYC*GNYCPCGSIQCLWC Trigger: GCACCAAAGACACTGGATAGACCCACAAGGGCAATAGTTTCCTCAACAGTATATCCAAACTGTTGGGACAAACGAGCAATCACTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 90 bp | GGATCTACACAAGAATCCCAACATGGATGGTTCTTTCCCAAACCCTaGGAAACACAGGCATTTTCCATATCCCAGGGTTTATCGAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: GSTQESQHGWFFPKP*ETQAFSISQGLSKC Trigger: ACACTTCGATAAACCCTGGGATATGGAAAATGCCTGTGTTTCTCAGGGTTTGGGAAAGAACCATCCATGTTGGGATTCTTGTGTAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | AGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATTCCAATCCCTGCTCAGTaGCCTCTGCCCCCTCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SPWRSFCQSREGRCSPFIPIPAQ*PLPPLG Trigger: CCCTAGAGGGGGCAGAGGCCACTGAGCAGGGATTGG...AATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | TCCTTAAAGACATCAGGGATCTACGGGAAGTTTGAAGTCAAAGCCTaGAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SLKTSGIYGKFEVKA*SPWRSFCQSREGRC Trigger: GCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTCAAGGCTTTGACTTCAAACTTCCCGTAGATCCCTGATGTCTTTAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | TACCACTTTTTGTCCCTTCTCAGCTGGACACTGACATTGTGGGAACTTGTCACTTGCTGCTTGGCATATTaGACAGGGTCCTTCGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: YHFLSLLSWTLTLWELVTCCLAY*TGSFGA Trigger: GGCCCCGAAGGACCCTGTCCAATATGCCAAGCAGCA...AGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | CACGGGAAGGCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGTTGTCCCTTCTCAGCTaGACACTGACATTGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HGKAGAHLSFPPSFFLEVLSLLS*TLTLWE Trigger: TTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAA...CACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATTTGTTCTTCTTTCTTTaGCCCAATTGGAACCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: ESVEIFLPVTGRQVLTFHLFFFL*PNWNLL Trigger: GAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAA...ATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | CAGGGCTGGTACCACTTTTTGTCCCTTCTCAGCTGGACACTGACATaGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGTTTGTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QGWYHFLSLLSWTLT*WELVTSSVIARLSQ Trigger: TTGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTACCAGCCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | CACGGGAAGGCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTaGGAGGTGGAGACTCTGATTTCTCATTGGCTGAGAAGCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: HGKAGAHLSFPPSFF*EVETLISHWLRSNG Trigger: TCCATTGCTTCTCAGCCAATGAGAAATCAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGGTTGGTGTTTTAGGTCCTaGTGGCTGTGGCCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: HLYCCSSFFGPIGTCSSGWCFRS*WLWPGA Trigger: TGCTCCAGGCCACAGCCACCAGGACCTAAAACACCA...ACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGAAGACTGCTGTACCATaGCTCTTTCCAGCATCCTTC | + |
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Preference number: 2 (lower is better) Translates to: AGAHLSFPPSFFLEVETLKTAVP*LFPASF Trigger: GAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTT...CAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | TGGTGTCTAGGTCTTAGGGCTGTAGGGCCAGAGTTGTCTGTGAATTaGCTCCTTTGCCTGAAAATCCAGTGTATTGCATCTGTGACCAGA | + |
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Preference number: 2 (lower is better) Translates to: WCLGLRAVGPELSVN*LLCLKIQCIASVTR Trigger: TCTGGTCACAGATGCAATACACTGGATTTTCAGGCAAAGGAGCAAATTCACAGACAACTCTGGCCCTACAGCCCTAAGACCTAGACACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | AGACTGCTGTACCATGGCTCTTTCCAGCATCCTTCATCTCTATTGTaGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: RLLYHGSFQHPSSLL*FFFLWPNWNLLLRS Trigger: GGACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | GACAAGACTGCTGTACCATGGCTCTTTCCAGCATCCTTCATCTCTATTGTTGTTCTGGTGGCTGTGGCCTaGAGCAATGTAATGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: DKTAVPWLFPASFISIVVLVAVA*SNVMST Trigger: TGTGGACATTACATTGCTCCAGGCCACAGCCACCAG...AACAACAATAGAGATGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | GTAAGAGTCATGTCTGAAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCATTCCAAGGAGATGGTaGTGTCTAGGTCTTAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: VRVMSEGQDCCTMALSSIIPRRW*CLGLRA Trigger: AGCCCTAAGACCTAGACACCACCATCTCCTTGGAAT...GATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | GCCTCAAAGTCCCAGTCCTTCTTTGTTGTGTGCCGGGTGTTAAATTaGATAATTCCAAGGAGATGGTGGTGTCTAGGTCTTAGGGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ASKSQSFFVVCRVLN*IIPRRWWCLGLRAV Trigger: TACAGCCCTAAGACCTAGACACCACCATCTCCTTGGAATTATCAAATTTAACACCCGGCACACAACAAAGAAGGACTGGGACTTTGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | ACAAGACTGCTGTACCATGGCTCTTTCCAGCATCCTTCATCTCTATaGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TRLLYHGSFQHPSSL*LFFFLWPNWNLLLR Trigger: CCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR TCA 90 bp | GTAAGAGTCATGTCTGAAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCTTGTCACTTCTTCAGTaGTTGCTCGTTTGTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: VRVMSEGQDCCTMALSSILSLLQ*LLVCPN Trigger: GTTGGGACAAACGAGCAATCACTGAAGAAGTGACAA...GATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR TCA 90 bp | AAATCTGTCTCATCTTTCGGATCTACAACCTGCCTCTTCTATCACGTATTCCTGTCTTTGGTGCTGCTGTaGTGGTGTTTTAGGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KSVSSFGSTTCLFYHVFLSLVLL*WCFRSW Trigger: CCAGGACCTAAAACACCATCACAGCAGCACCAAAGA...CAGGAATACGTGATAGAAGAGGCAGGTTGTAGATCCGAAAGATGAGACAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGAAGGAGGATCTACACAAGAATCCCAACATGGATGGTTCTTTCCCAAACCCATCCAGTGTCTTTGGTaGTGCTGTGATGGTGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: PEGGSTQESQHGWFFPKPIQCLW*CCDGVL Trigger: TAAAACACCATCACAGCAGCACCAAAGACACTGGAT...GGGTTTGGGAAAGAACCATCCATGTTGGGATTCTTGTGTAGATCCTCCTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR GCA 90 bp | GTAAGAGTCATGTCTGAAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCGAAAATCCAGTGTATTaGATCTGTGACCAGAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VRVMSEGQDCCTMALSSIENPVY*ICDQKE Trigger: CTCCTTCTGGTCACAGATGCAATACACTGGATTTTC...GATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | ATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGATTTCTCATaGGCTGAGAAGCAATGGAGAAACAGGCATTGGACCTGTGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: ISTFLFLGGGDSDFS*AEKQWRNRHWTCVV Trigger: TACTACACAGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAAATCAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | GTCATGGCAGGTCATGACAATGCCAAGGTCGCTAGAATAATTCAGTaGGACCCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTT | + |
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Preference number: 2 (lower is better) Translates to: VMAGHDNAKVARIIQ*DPALSGVDKICLIF Trigger: AAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGGGTCCAACTGAATTATTCTAGCGACCTTGGCATTGTCATGACCTGCCATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGTCTATCCAGTGTCTTTaGTGCTGCTGTGATGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: PALSGVDKICLIFRIYNLSIQCL*CCCDGV Trigger: AACACCATCACAGCAGCACCAAAGACACTGGATAGA...CAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CAA 90 bp | ACACTGACATTGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGTTaGTCCCAACAGTTTGGATATACTGTTGAGGAAACTATTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: TLTLWELVTSSVIAR*SQQFGYTVEETIAL Trigger: AAGGGCAATAGTTTCCTCAACAGTATATCCAAACTGTTGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR TCA 90 bp | CATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGGTATTTGCTCCTTTGCCTaGAAATCCAGTGTATTGCAT | + |
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Preference number: 2 (lower is better) Translates to: HLYCCSSFFGPIGTCSSGICSFA*KSSVLH Trigger: ATGCAATACACTGGATTTTCAGGCAAAGGAGCAAAT...ACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | CCTGAGAAACACAGGCATTTTCCATATCCCAGGGTTTATCGAAGTGTTAAGGAGAATGTAATGTCCACATaGTCCTTCAGAGAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: PEKHRHFPYPRVYRSVKENVMST*SFREGK Trigger: TTTTCCCTCTCTGAAGGACCATGTGGACATTACATT...CTCCTTAACACTTCGATAAACCCTGGGATATGGAAAATGCCTGTGTTTCTCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CCA 90 bp | CACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGATTTCTCATACAAGAATCCCAACATaGATGGTTCTTTCCCAAACC | + |
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Preference number: 2 (lower is better) Translates to: HLSFPPSFFLEVETLISHTRIPT*MVLSQT Trigger: GGTTTGGGAAAGAACCATCCATGTTGGGATTCTTGT...ATGAGAAATCAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR TCA 90 bp | AAATCTGTCTCATCTTTCGGATCTACAACCTGCCTCTTCTATCACGTATTCCTGGTTTGGATATACTGTTaGGGAAACTATTGCCCTTGT | + |
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Preference number: 2 (lower is better) Translates to: KSVSSFGSTTCLFYHVFLVWIYC*GNYCPC Trigger: ACAAGGGCAATAGTTTCCTCAACAGTATATCCAAAC...CAGGAATACGTGATAGAAGAGGCAGGTTGTAGATCCGAAAGATGAGACAGATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 72 bp | AACCTGCTCCTCAGGTCCCTCTCCAGGAGGTCCTTGTaGTCACCCAATCCCTGCTCAGTGGCCTCTGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: NLLLRSLSRRSL*SPNPCSVASAP Trigger: GGGGGCAGAGGCCACTGAGCAGGGATTGGGTGATCACAAGGACCTCCTGGAGAGGGACCTGAGGAGCAGGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 72 bp | CCCTTGTGGGTCTATCCAGTGTCTTTGGTGCTGCTGTaGTGGTGTTTTAGGTCCTGGTGGCTGTGGCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: PLWVYPVSLVLL*WCFRSWWLWPG Trigger: TCCAGGCCACAGCCACCAGGACCTAAAACACCATCACAGCAGCACCAAAGACACTGGATAGACCCACAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR GCA 72 bp | TATTGCCCTTGTGGGTCTATCCAGTGTCTTTGGTGCTaGTGTGATGGTGTTTTAGGTCCTGGTGGCTGTGGC | + |
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Preference number: 3 (lower is better) Translates to: YCPCGSIQCLWC*CDGVLGPGGCG Trigger: GCCACAGCCACCAGGACCTAAAACACCATCACAGCAGCACCAAAGACACTGGATAGACCCACAAGGGCAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CAA 90 bp | CACGGGAAGGCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGCTTTCTTTGGCCCAATaGGAACCTGCTCCTCAGGTC | + |
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Preference number: 3 (lower is better) Translates to: HGKAGAHLSFPPSFFLEVLSLAQ*EPAPQV Trigger: GACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAG...CACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 72 bp | ACATGGTCCTTCAGAGAGGGAAAATTTGAGAGTAGCTaGGTCTCGGGGTCGGAGGAAAGCGAGATGAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: TWSFREGKFESS*VSGSEESEMSR Trigger: TCTGCTCATCTCGCTTTCCTCCGACCCCGAGACTCAGCTACTCTCAAATTTTCCCTCTCTGAAGGACCATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR CCA 72 bp | GGAAACTATTGCCCTTGTGGGTCTATCCAGTGTCTTTaGTGCTGCTGTGATGGTGTTTTAGGTCCTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: GNYCPCGSIQCL*CCCDGVLGPGG Trigger: GCCACCAGGACCTAAAACACCATCACAGCAGCACCAAAGACACTGGATAGACCCACAAGGGCAATAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR-3UTR CAA 90 bp | CACGGGAAGGCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGAGGAAACTATTGCCCTaGTGGGTCTATCCAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: HGKAGAHLSFPPSFFLEVRKLLP*WVYPVS Trigger: AGACACTGGATAGACCCACAAGGGCAATAGTTTCCT...CACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR TCA 72 bp | GCTACTGTAAGAGTCCTGGGCTGTAAGAGTCATGTCTaGAGGACAAGACTGCTGTACCATGGCTCTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: ATVRVLGCKSHV*RTRLLYHGSFQ Trigger: CTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTACAGCCCAGGACTCTTACAGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR GCA 72 bp | AACTATTGCCCTTGTGGGTCTATCCAGTGTCTTTGGTaGTGCTGTGATGGTGTTTTAGGTCCTGGTGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NYCPCGSIQCLW*CCDGVLGPGGC Trigger: ACAGCCACCAGGACCTAAAACACCATCACAGCAGCACCAAAGACACTGGATAGACCCACAAGGGCAATAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
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| 3UTR GCA 72 bp | TCCTGGGCTGTAAGAGTCATGTCTGAAGGACAAGACTaGTGTACCATGGCTCTTTCCAGCATCCTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SWAVRVMSEGQD*CTMALSSILHL Trigger: GAGATGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTACAGCCCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | GGACAGGGCTGGTACCACTTTTTGTCCCTTCTCAGCTaGACACTGACATTGTGGGAACTTGTCACTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GQGWYHFLSLLS*TLTLWELVTSS Trigger: TGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTACCAGCCCTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | TCATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTaGAACCTGCTCCTCAGGTCCCTCTCCAGGAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLLFFFLWPN*NLLLRSLSRRS Trigger: GGACCTCCTGGAGAGGGACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR GCA 72 bp | TATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTaGTCCTCAGGTCCCTCTCCAGGAGGTCCTTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YCCSSFFGPIGT*SSGPSPGGPCD Trigger: ATCACAAGGACCTCCTGGAGAGGGACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | TGCCGGGTGTTAAATTTGATAATTCCAAGGAGATGGTaGTGTCTAGGTCTTAGGGCTGTAGGGCCAGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CRVLNLIIPRRW*CLGLRAVGPEL Trigger: CAACTCTGGCCCTACAGCCCTAAGACCTAGACACCACCATCTCCTTGGAATTATCAAATTTAACACCCGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | TTCTCATTGGCTGAGAAGCAATGGAGAAACAGGCATTaGACCTGTGTAGTAGACTCACTCCACCCTCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSLAEKQWRNRH*TCVVDSLHPPV Trigger: TACTGGAGGGTGGAGTGAGTCTACTACACAGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGGTTGTTCTTCTTTCTTaGGCCCAATTGGAACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: AGAHLSFPPSFFLEVETLVVLLS*AQLEPA Trigger: AGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAAC...CAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GACCAGAAGGAGGATCTACACAAGAATCCCAACATGGATGGTTCTTTCCCAAACAGCTGGACACTGACATaGTGGGAACTTGTCACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DQKEDLHKNPNMDGSFPNSWTLT*WELVTS Trigger: AGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCT...GTTTGGGAAAGAACCATCCATGTTGGGATTCTTGTGTAGATCCTCCTTCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGGAGTTGTCTGTGAATTaGCTCCTTTGCCTGAAAATC | + |
|
Preference number: 3 (lower is better) Translates to: AGAHLSFPPSFFLEVETLELSVN*LLCLKI Trigger: GATTTTCAGGCAAAGGAGCAAATTCACAGACAACTC...CAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | GGTGGAGACTCTGATTTCTCATTGGCTGAGAAGCAATaGAGAAACAGGCATTGGACCTGTGTAGTAGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GGDSDFSLAEKQ*RNRHWTCVVDS Trigger: TGAGTCTACTACACAGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAAATCAGAGTCTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | CACTTTTTGTCCCTTCTCAGCTGGACACTGACATTGTaGGAACTTGTCACTTCTTCAGTGATTGCTCGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HFLSLLSWTLTL*ELVTSSVIARL Trigger: CAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CCA 72 bp | TCCTTTTTCTTGGAGGTGGAGACTCTGATTTCTCATTaGCTGAGAAGCAATGGAGAAACAGGCATTGGACCT | + |
|
Preference number: 3 (lower is better) Translates to: SFFLEVETLISH*LRSNGETGIGP Trigger: AGGTCCAATGCCTGTTTCTCCATTGCTTCTCAGCCAATGAGAAATCAGAGTCTCCACCTCCAAGAAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GTAAGAGTCATGTCTGAAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCCAGCTCTTTCTGGAGTaGATAAAATCTGTCTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: VRVMSEGQDCCTMALSSIQLFLE*IKSVSS Trigger: AGATGAGACAGATTTTATCAACTCCAGAAAGAGCTG...GATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR TCA 72 bp | GATTGCTCGTTTGTCCCAACAGTTTGGATATACTGTTaGGGAAACTATTGCCCTTGTGGGTCTATCCAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: DCSFVPTVWIYC*GNYCPCGSIQC Trigger: ACACTGGATAGACCCACAAGGGCAATAGTTTCCTCAACAGTATATCCAAACTGTTGGGACAAACGAGCAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR TCA 72 bp | CAAGAATCCCAACATGGATGGTTCTTTCCCAAACCCTaGGAAACACAGGCATTTTCCATATCCCAGGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QESQHGWFFPKP*ETQAFSISQGL Trigger: TAAACCCTGGGATATGGAAAATGCCTGTGTTTCTCAGGGTTTGGGAAAGAACCATCCATGTTGGGATTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR GCA 72 bp | ACAAAGGCCTCAAAGTCCCAGTCCTTCTTTGTTGTGTaGCGGGTGTTAAATTTGATAATTCCAAGGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: TKASKSQSFFVV*RVLNLIIPRRW Trigger: CCATCTCCTTGGAATTATCAAATTTAACACCCGGCACACAACAAAGAAGGACTGGGACTTTGAGGCCTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GACACTGACATTGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGTTTGTCCCAAGTTTGGATATACTGTaGAGGAAACTATTGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: DTDIVGTCHFFSDCSFVPSLDIL*RKLLPL Trigger: CAAGGGCAATAGTTTCCTCAACAGTATATCCAAACT...TGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGCCGGGTGTTAAATTTGATAATTCCAAGGAGATGGTGGTGTCTAGGTCTTGTTTGTCCCAACAGTTaGGATATACTGTTGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VCRVLNLIIPRRWWCLGLVCPNS*DILLRK Trigger: TTTCCTCAACAGTATATCCAAACTGTTGGGACAAAC...AAGACCTAGACACCACCATCTCCTTGGAATTATCAAATTTAACACCCGGCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGCTGGGCCAGGTGCTaGAGGGGACAGTCACTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGWARC*RGQSLS Trigger: GCTCAGTGACTGTCCCCTCCAGCACCTGGCCCAGCC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTCTGGCTGGGCCAGGTaGTGGAGGGGACAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDSGWAR*WRGQSL Trigger: CAGTGACTGTCCCCTCCAGCACCTGGCCCAGCCAGA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTTGCAGGTGACGGTCTaGCTGGGCCAGGTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLQVTV*LGQVLE Trigger: CTCCAGCACCTGGCCCAGCCAGACCGTCACCTGCAA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTCCCGGGGTTTCGTCTaGGCTGTGTGCACCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDSRGFV*AVCTST Trigger: TGTGGAGGTGCACACAGCTCAGACGAAACCCCGGGA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTCTTGTCCACCTTGGTaGTGCTGGCCGGGTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDSCPPW*CWPGGQ Trigger: TTGCCCACCCGGCCAGCAGCACCAAGGTGGACAAGA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCAGGGAAATAGCCCTTaGCCAGGCATCCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDQGNSP*PGIPGS Trigger: TGACCCTGGGATGCCTGGTCAAGGGCTATTTCCCTG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGAGGGGACAGTCACTaGGCTGCTCAGAGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGGDSH*AAQSVE Trigger: CTCTACACTCTGAGCAGCTCAGTGACTGTCCCCTCC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACACAGCTGGGAAGGTGTaGACACCGCTGGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDTAGKV*TPLDRD Trigger: ATCCCTGTCCAGCGGTGTGCACACCTTCCCAGCTGT...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTTTTCTTGTCCACCTTaGTGCTGCTGGCCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDFSCPP*CCWPGG Trigger: CCCACCCGGCCAGCAGCACCAAGGTGGACAAGAAAA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGGGGCAGGGAAAGCTaGACTGTTGACCCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGGRES*TVDPAF Trigger: AAATGCAGGGTCAACAGTGCAGCTTTCCCTGCCCCC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACACCATGGAGTTAGTTTaGGCAGCAGATCCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDTMELV*AADPGA Trigger: GGCCCCTGGATCTGCTGCCCAAACTAACTCCATGGT...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCCTTGGGAGGTGGAATaGTGTACACCTGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDPWEVE*CTPVEP Trigger: AGGCTCCACAGGTGTACACCATTCCACCTCCCAAGG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCTGCTCCTTGGGAGGTaGAATGGTGTACACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLLLGR*NGVHLW Trigger: CCACAGGTGTACACCATTCCACCTCCCAAGGAGCAG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGACAGTCACTGAGCTaGTCAGAGTGTAGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGQSLS*SECRGQ Trigger: CTGACCTCTACACTCTGAGCAGCTCAGTGACTGTCC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCCAGGTCACTGTCACTaGCTCAGGGAAATAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDPGHCH*LREIAL Trigger: AAGGGCTATTTCCCTGAGCCAGTGACAGTGACCTGG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTGGCCATCTGCTCCTTaGGAGGTGGAATGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDWPSAP*EVEWCT Trigger: TGTACACCATTCCACCTCCCAAGGAGCAGATGGCCA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACAGCCATCTGTGTCCATaGTGGGCTGAGTGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDSHLCP*WAECSC Trigger: ACAAGAACACTCAGCCCATCATGGACACAGATGGCT...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGTAACACAGAGCAGGTaGAAGTATTTCCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDVTQSR*KYFLPP Trigger: GGGAGGCAGGAAATACTTTCACCTGCTCTGTGTTAC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTTGAGCCAGTCCTGGTaGATGATGGGAAGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLSQSW*MMGSSL Trigger: CAGTGAACTTCCCATCATGCACCAGGACTGGCTCAA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCACATCCTTGGGCTTTaGGGGGAAGATGAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDHILGL*GEDEDR Trigger: TCTGTCTTCATCTTCCCCCCAAAGCCCAAGGATGTG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCTCTTCTCAGTATGGTaGTTGTGCAGGCCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLFSVW*LCRPSC Trigger: ACATGAGGGCCTGCACAACCACCATACTGAGAAGAG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTCATGCAGGTCAGACTaGCTTTATCCTTGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDSCRSD*LYPWPS Trigger: AGATGGCCAAGGATAAAGTCAGTCTGACCTGCATGA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR GCA 90 bp | CCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATTTCCACAGCTGGGAAGGTGTaGACACCGCTGGACAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PWRSFCQSREGRCSPFISTAGKV*TPLDRD Trigger: ATCCCTGTCCAGCGGTGTGCACACCTTCCCAGCTGT...GGAAATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGTGAAAGTATTTCCTaGCTCCCAGTTGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGESIS*LPVALL Trigger: CAGAAGAGCAACTGGGAGGCAGGAAATACTTTCACC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGTGCTCACCTTTCATTTCCACCTTCCTTTTTCTTGGAGGTGGAGACTCTGTTGCAGGTGACGGTCTaGCTGGGCCAGGTGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGAHLSFPPSFFLEVETLLQVTV*LGQVLE Trigger: CTCCAGCACCTGGCCCAGCCAGACCGTCACCTGCAA...CAGAGTCTCCACCTCCAAGAAAAAGGAAGGTGGAAATGAAAGGTGAGCACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCCTTCGGTCTGCCTTTaGTTTTGGAGATGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDPSVCL*FWRWFS Trigger: AGAAAACCATCTCCAAAACCAAAGGCAGACCGAAGG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CCA 90 bp | GAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATCTGCTCCTTGGGAGGTaGAATGGTGTACACCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESVEIFLPVTGRQVLTFHLLLGR*NGVHLW Trigger: CCACAGGTGTACACCATTCCACCTCCCAAGGAGCAG...ATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | GAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATGGACAGTCACTGAGCTaGTCAGAGTGTAGAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESVEIFLPVTGRQVLTFHGQSLS*SECRGQ Trigger: CTGACCTCTACACTCTGAGCAGCTCAGTGACTGTCC...ATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTACAACCACAATCCCTaGGCACAATTTTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDYNHNP*AQFSCP Trigger: TGGACAAGAAAATTGTGCCCAGGGATTGTGGTTGTA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| 3UTR CAA 72 bp | GCAGACAGTGTGATCTCAGTTGTGCTGCTTGGCATATaGGACAGGGTCCTTCGGGGCCTGGGAAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ADSVISVVLLGI*DRVLRGLGNAI Trigger: AATGGCATTTCCCAGGCCCCGAAGGACCCTGTCCAATATGCCAAGCAGCACAACTGAGATCACACTGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | AGTTGTGCTGCTTGGCATATTGGACAGGGTCCTTCGGGGCCTGGGAAATGCCATTTGAGCCAGTCCTGGTaGATGATGGGAAGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCAAWHIGQGPSGPGKCHLSQSW*MMGSSL Trigger: CAGTGAACTTCCCATCATGCACCAGGACTGGCTCAA...ATGGCATTTCCCAGGCCCCGAAGGACCCTGTCCAATATGCCAAGCAGCACAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | TCAGAGAGGGAAAATTTGAGAGTAGCTGAGTCTCGGGGTCGGAGGAAAGCGAGAGGGGGCAGGGAAAGCTaGACTGTTGACCCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SERENLRVAESRGRRKARGGRES*TVDPAF Trigger: AAATGCAGGGTCAACAGTGCAGCTTTCCCTGCCCCC...TCTCGCTTTCCTCCGACCCCGAGACTCAGCTACTCTCAAATTTTCCCTCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATTTCCACCCCAGGTCACTGTCACTaGCTCAGGGAAATAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WRSFCQSREGRCSPFISTPGHCH*LREIAL Trigger: AAGGGCTATTTCCCTGAGCCAGTGACAGTGACCTGG...GGTGGAAATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GTAAGAGTCATGTCTGAAGGACAAGACTGCTGTACCATGGCTCTTTCCAGCATCTTTTCTTGTCCACCTTaGTGCTGCTGGCCGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVMSEGQDCCTMALSSIFSCPP*CCWPGG Trigger: CCCACCCGGCCAGCAGCACCAAGGTGGACAAGAAAA...GATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTCCTTCAGACATGACTCTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR TCA 90 bp | TACCACTTTTTGTCCCTTCTCAGCTGGACACTGACATTGTGGGAACTTGTCACTCAGGGAAATAGCCCTTaGCCAGGCATCCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YHFLSLLSWTLTLWELVTQGNSP*PGIPGS Trigger: TGACCCTGGGATGCCTGGTCAAGGGCTATTTCCCTG...AGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | CCTGAGAAACACAGGCATTTTCCATATCCCAGGGTTTATCGAAGTGTTAAGGAGTCTTGTCCACCTTGGTaGTGCTGGCCGGGTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PEKHRHFPYPRVYRSVKESCPPW*CWPGGQ Trigger: TTGCCCACCCGGCCAGCAGCACCAAGGTGGACAAGA...CTCCTTAACACTTCGATAAACCCTGGGATATGGAAAATGCCTGTGTTTCTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGCCTCAAAGTCCCAGTCCTTCTTTGTTGTGTGCCGGGTGTTAAATTTGACCATGGAGTTAGTTTaGGCAGCAGATCCAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKASKSQSFFVVCRVLNLTMELV*AADPGA Trigger: GGCCCCTGGATCTGCTGCCCAAACTAACTCCATGGT...CAAATTTAACACCCGGCACACAACAAAGAAGGACTGGGACTTTGAGGCCTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCCTGGAGCAATGTAATGTCCACATGGTCCTTCAGAGAGGGAAAATTTGAGTGGCCATCTGCTCCTTaGGAGGTGGAATGGTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VAWSNVMSTWSFREGKFEWPSAP*EVEWCT Trigger: TGTACACCATTCCACCTCCCAAGGAGCAGATGGCCA...CTCAAATTTTCCCTCTCTGAAGGACCATGTGGACATTACATTGCTCCAGGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | ATTAGAAGGTGGTGTGGACAGGGCTGGTACCACTTTTaGTCCCTTCTCAGCTGGACACTGACATTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRRWCGQGWYHF*SLLSWTLTLWE Trigger: TTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTACCAGCCCTGTCCACACCACCTTCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCTTTGTTGTGTGCCGGGTGTTAAATTTGATAATTCCAAGGAGATGGTGGGAGGGGACAGTCACTaGGCTGCTCAGAGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLCCVPGVKFDNSKEMVGGDSH*AAQSVE Trigger: CTCTACACTCTGAGCAGCTCAGTGACTGTCCCCTCC...CACCATCTCCTTGGAATTATCAAATTTAACACCCGGCACACAACAAAGAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCGGGTGTTAAATTTGATAATTCCAAGGAGATGGTGGTGTCTAGGTCTTCCTTGGGAGGTGGAATaGTGTACACCTGTGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCRVLNLIIPRRWWCLGLPWEVE*CTPVEP Trigger: AGGCTCCACAGGTGTACACCATTCCACCTCCCAAGG...AAGACCTAGACACCACCATCTCCTTGGAATTATCAAATTTAACACCCGGCACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | GGCTGTAGGGCCAGAGTTGTCTGTGAATTTGCTCCTTaGCCTGAAAATCCAGTGTATTGCATCTGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRARVVCEFAP*PENPVYCICDQ Trigger: CTGGTCACAGATGCAATACACTGGATTTTCAGGCAAAGGAGCAAATTCACAGACAACTCTGGCCCTACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR TCA 90 bp | GACACTGACATTGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGTTTGTCCCATCATGCAGGTCAGACTaGCTTTATCCTTGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: DTDIVGTCHFFSDCSFVPSCRSD*LYPWPS Trigger: AGATGGCCAAGGATAAAGTCAGTCTGACCTGCATGA...TGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR TCA 90 bp | CATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGGTGTAACACAGAGCAGGTaGAAGTATTTCCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HLYCCSSFFGPIGTCSSGVTQSR*KYFLPP Trigger: GGGAGGCAGGAAATACTTTCACCTGCTCTGTGTTAC...ACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGCACATCCTTGGGCTTTaGGGGGAAGATGAAGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PALSGVDKICLIFRIYNLHILGL*GEDEDR Trigger: TCTGTCTTCATCTTCCCCCCAAAGCCCAAGGATGTG...CAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGCTCTTCTCAGTATGGTaGTTGTGCAGGCCCTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PALSGVDKICLIFRIYNLLFSVW*LCRPSC Trigger: ACATGAGGGCCTGCACAACCACCATACTGAGAAGAG...CAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | TACCACTTTTTGTCCCTTCTCAGCTGGACACTGACATaGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YHFLSLLSWTLT*WELVTSSVIAR Trigger: ACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAATGTCAGTGTCCAGCTGAGAAGGGACAAAAAGTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGCCTCTTCTATAGCCATCTGTGTCCATaGTGGGCTGAGTGTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LELIKSVSSFGSTTCLFYSHLCP*WAECSC Trigger: ACAAGAACACTCAGCCCATCATGGACACAGATGGCT...ATAGAAGAGGCAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGCCTCAAAGTCCCAGTCCTTCTTTGTTGTGTGCCGGGTGTTAAATTTGTACAACCACAATCCCTaGGCACAATTTTCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKASKSQSFFVVCRVLNLYNHNP*AQFSCP Trigger: TGGACAAGAAAATTGTGCCCAGGGATTGTGGTTGTA...CAAATTTAACACCCGGCACACAACAAAGAAGGACTGGGACTTTGAGGCCTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | TCCCAGTCCTTCTTTGTTGTGTGCCGGGTGTTAAATTaGATAATTCCAAGGAGATGGTGGTGTCTAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQSFFVVCRVLN*IIPRRWWCLGL Trigger: AAGACCTAGACACCACCATCTCCTTGGAATTATCAAATTTAACACCCGGCACACAACAAAGAAGGACTGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | CTGTACCATGGCTCTTTCCAGCATCCTTCATCTCTATaGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LYHGSFQHPSSL*LFFFLWPNWNL Trigger: CAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATGAAGGATGCTGGAAAGAGCCATGGTACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGCCTTCGGTCTGCCTTTaGTTTTGGAGATGGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PALSGVDKICLIFRIYNLPSVCL*FWRWFS Trigger: AGAAAACCATCTCCAAAACCAAAGGCAGACCGAAGG...CAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | GGTCATGACAATGCCAAGGTCGCTAGAATAATTCAGTaGGACCCAGCTCTTTCTGGAGTTGATAAAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GHDNAKVARIIQ*DPALSGVDKIC Trigger: ACAGATTTTATCAACTCCAGAAAGAGCTGGGTCCAACTGAATTATTCTAGCGACCTTGGCATTGTCATGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR GCA 90 bp | TTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGCCTCTTCTATCACGTAGGTGAAAGTATTTCCTaGCTCCCAGTTGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIKSVSSFGSTTCLFYHVGESIS*LPVALL Trigger: CAGAAGAGCAACTGGGAGGCAGGAAATACTTTCACC...TACGTGATAGAAGAGGCAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| 3UTR CAA 72 bp | TTGTGGGAACTTGTCACTTCTTCAGTGATTGCTCGTTaGTCCCAACAGTTTGGATATACTGTTGAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: LWELVTSSVIAR*SQQFGYTVEET Trigger: AGTTTCCTCAACAGTATATCCAAACTGTTGGGACAAACGAGCAATCACTGAAGAAGTGACAAGTTCCCACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS TCA 90 bp | GCAGGTGACGGTCTGGCTGGGCCAGGTGCTGGAGGGGACAGTCACTaGGCTGCTCAGAGTGTAGAGGTCAGACTGCAGGACAGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AGDGLAGPGAGGDSH*AAQSVEVRLQDSWE Trigger: TTCCCAGCTGTCCTGCAGTCTGACCTCTACACTCTGAGCAGCTCAGTGACTGTCCCCTCCAGCACCTGGCCCAGCCAGACCGTCACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
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| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACATTTTCTTGTCCACCTaGGTGCTGCTGGCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDIFLST*VLLAGW Trigger: CCACCCGGCCAGCAGCACCAAGGTGGACAAGAAAAT...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTTGGCCATCTGCTCCTaGGGAGGTGGAATGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLAICS*GGGMVY Trigger: GTACACCATTCCACCTCCCAAGGAGCAGATGGCCAA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGGGAAAGCTGCACTGTaGACCCTGCATTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDGKAAL*TLHLNS Trigger: GGAGTTCAAATGCAGGGTCAACAGTGCAGCTTTCCC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACTTTCCTGCCTCCCAGTaGCTCTTCTGCACATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDFPASQ*LFCTLS Trigger: GCTCAATGTGCAGAAGAGCAACTGGGAGGCAGGAAA...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACGCCTTCGGTCTGCCTTaGGTTTTGGAGATGGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDAFGLP*VLEMVF Trigger: GAAAACCATCTCCAAAACCAAAGGCAGACCGAAGGC...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | GAGTCCGTGGAGATCTTTCTGCCAGTCACGGGAAGGCAGGTGCTCACCTTTCATATTTTCTTGTCCACCTaGGTGCTGCTGGCCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ESVEIFLPVTGRQVLTFHIFLST*VLLAGW Trigger: CCACCCGGCCAGCAGCACCAAGGTGGACAAGAAAAT...ATGAAAGGTGAGCACCTGCCTTCCCGTGACTGGCAGAAAGATCTCCACGGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGGTGGAGGTAGGTGTCAGAGTCCTGTAGGACCAGAGGGCTCCAAGGACCTTCAGGGAAGAAGTTaGTTATCATGCAGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRCQSPVGPEGSKDLQGRS*LSCRSD Trigger: GTCTGACCTGCATGATAACAAACTTCTTCCCTGAAG...GTCCTTGGAGCCCTCTGGTCCTACAGGACTCTGACACCTACCTCCACCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103420.3 |
||
| CDS-3UTR CAA 90 bp | AGTTGTGCTGCTTGGCATATTGGACAGGGTCCTTCGGGGCCTGGGAAATGCCATGGGAAAGCTGCACTGTaGACCCTGCATTTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCAAWHIGQGPSGPGKCHGKAAL*TLHLNS Trigger: GGAGTTCAAATGCAGGGTCAACAGTGCAGCTTTCCC...ATGGCATTTCCCAGGCCCCGAAGGACCCTGTCCAATATGCCAAGCAGCACAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS CCA 90 bp | GCCATCTGTGTCCATGATGGGCTGAGTGTTCTTGTAGTTCTCCGCTaGCTGCCCATTCCACTGCCACTCCACAGTAATGTCTTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AICVHDGLSVLVVLR*LPIPLPLHSNVFRE Trigger: TTCCCTGAAGACATTACTGTGGAGTGGCAGTGGAATGGGCAGCCAGCGGAGAACTACAAGAACACTCAGCCCATCATGGACACAGATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS CCA 90 bp | GCACTGTTGACCCTGCATTTGAACTCCTTGCCATTGAGCCAGTCCTaGTGCATGATGGGAAGTTCACTGACTGAACGGAAAGTGCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLTLHLNSLPLSQS*CMMGSSLTERKVLL Trigger: CAACAGCACTTTCCGTTCAGTCAGTGAACTTCCCATCATGCACCAGGACTGGCTCAATGGCAAGGAGTTCAAATGCAGGGTCAACAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS-3UTR CAA 90 bp | CATCTCTATTGTTGTTCTTCTTTCTTTGGCCCAATTGGAACCTGCTCCTCAGGTTTGGCCATCTGCTCCTaGGGAGGTGGAATGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: HLYCCSSFFGPIGTCSSGLAICS*GGGMVY Trigger: GTACACCATTCCACCTCCCAAGGAGCAGATGGCCAA...ACCTGAGGAGCAGGTTCCAATTGGGCCAAAGAAAGAAGAACAACAATAGAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CAA 90 bp | GACAAGACTGCTGTACCATGGCTCTTTCCAGCATCCTTCATCTCTATTGTTGTTTTTCCTGCCTCCCAGTaGCTCTTCTGCACATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DKTAVPWLFPASFISIVVFPASQ*LFCTLS Trigger: GCTCAATGTGCAGAAGAGCAACTGGGAGGCAGGAAA...AACAACAATAGAGATGAAGGATGCTGGAAAGAGCCATGGTACAGCAGTCTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTGGAGCAATGTAATGTCCACATGGTCCTTCAGAGAGGGAAAATTTGAGCTTCAGGGAAGAAGTTaGTTATCATGCAGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VAWSNVMSTWSFREGKFELQGRS*LSCRSD Trigger: GTCTGACCTGCATGATAACAAACTTCTTCCCTGAAG...CTCAAATTTTCCCTCTCTGAAGGACCATGTGGACATTACATTGCTCCAGGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCTTTCTGGAGTTGATAAAATCTGTCTCATCTTTCGGATCTACAACCTGAAGATCCACTTTACCTaGAAGAGTGTGACAGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PALSGVDKICLIFRIYNLKIHFT*KSVTAA Trigger: CGCTGCTGTCACACTCTTCAAGGTAAAGTGGATCTT...CAGGTTGTAGATCCGAAAGATGAGACAGATTTTATCAACTCCAGAAAGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194304.6 |
||
| CDS TCA 72 bp | GGTCTGGCTGGGCCAGGTGCTGGAGGGGACAGTCACTaGGCTGCTCAGAGTGTAGAGGTCAGACTGCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLAGPGAGGDSH*AAQSVEVRLQD Trigger: GTCCTGCAGTCTGACCTCTACACTCTGAGCAGCTCAGTGACTGTCCCCTCCAGCACCTGGCCCAGCCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS GCA 72 bp | GGCTGGGCCAGGTGCTGGAGGGGACAGTCACTGAGCTaGTCAGAGTGTAGAGGTCAGACTGCAGGACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GWARCWRGQSLS*SECRGQTAGQL Trigger: CAGCTGTCCTGCAGTCTGACCTCTACACTCTGAGCAGCTCAGTGACTGTCCCCTCCAGCACCTGGCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS CAA 72 bp | CTTGACCAGGCATCCCAGGGTCACCATGGAGTTAGTTaGGGCAGCAGATCCAGGGGCCAGTGGATAGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: LDQASQGHHGVS*GSRSRGQWIDR Trigger: TCTGTCTATCCACTGGCCCCTGGATCTGCTGCCCAAACTAACTCCATGGTGACCCTGGGATGCCTGGTCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS CCA 72 bp | CATCTGCTCCTTGGGAGGTGGAATGGTGTACACCTGTaGAGCCTTCGGTCTGCCTTTGGTTTTGGAGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLLLGRWNGVHL*SLRSAFGFGDG Trigger: ACCATCTCCAAAACCAAAGGCAGACCGAAGGCTCCACAGGTGTACACCATTCCACCTCCCAAGGAGCAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS CCA 72 bp | ACCCTGCATTTGAACTCCTTGCCATTGAGCCAGTCCTaGTGCATGATGGGAAGTTCACTGACTGAACGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: TLHLNSLPLSQS*CMMGSSLTERK Trigger: TTTCCGTTCAGTCAGTGAACTTCCCATCATGCACCAGGACTGGCTCAATGGCAAGGAGTTCAAATGCAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
||
| CDS TCA 72 bp | CTTCAGGGAAGAAGTTTGTTATCATGCAGGTCAGACTaGCTTTATCCTTGGCCATCTGCTCCTTGGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: LQGRSLLSCRSD*LYPWPSAPWEV Trigger: CACCTCCCAAGGAGCAGATGGCCAAGGATAAAGTCAGTCTGACCTGCATGATAACAAACTTCTTCCCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
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| CDS CAA 72 bp | AAGTTTGTTATCATGCAGGTCAGACTGACTTTATCCTaGGCCATCTGCTCCTTGGGAGGTGGAATGGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: KFVIMQVRLTLS*AICSLGGGMVY Trigger: GTACACCATTCCACCTCCCAAGGAGCAGATGGCCAAGGATAAAGTCAGTCTGACCTGCATGATAACAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103420.3 ENSMUST00000194304.6 |
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