Pregenerated sensors for IGHE (Mus musculus)
Ensembl gene IDs: ENSMUSG00000087642Ensembl transcript IDs: ENSMUST00000137336.3, ENSMUST00000223335.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTCGGGGGCTGAGCGCTaGCCTGGGGTCTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSSGAER*PGVLVM Trigger: CATCACCAAGACCCCAGGCCAGCGCTCAGCCCCCGA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACCCCCAGCTGGTCACTTaGCTGGTGGTGACCTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASWCYNSERMSVIHLPHHPQLVT*LVVTLS Trigger: ACTCAAGGTCACCACCAGCCAAGTGACCAGCTGGGG...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACATCTGGATCAAGCAGGTaGGTGTGCGTTTGTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTSGSSR*VCVCPR Trigger: GCGAGGACAAACGCACACTCACCTGCTTGATCCAGA...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCCATGTTCAGGGAGTCTaGATACCAGGTCACAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSHVQGV*IPGHSH Trigger: GTGACTGTGACCTGGTATTCAGACTCCCTGAACATG...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACGGATCACTTGGCAGGTaGACTGTTTTCTCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASWCYNSERMSVIHLPHHGSLGR*TVFSVS Trigger: GGACACAGAGAAAACAGTTCACCTGCCAAGTGATCC...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACCCTGGGTTTCTGAAGTaGCTCATGGATCACTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASWCYNSERMSVIHLPHHPGFLK*LMDHLA Trigger: TGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGG...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCGTTGTGGCGTTATGGTaGTGCTTAGTGTACCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSVVALW*CLVYHW Trigger: CCAGTGGTACACTAAGCACCACCATAACGCCACAAC...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCCTTCAATCCAGTCCTTaGCAACTACAGGCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSLQSSP*QLQAGW Trigger: CCATCCTGCCTGTAGTTGCCAAGGACTGGATTGAAG...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACACTCGCTCTCCTCCTCTaGTGGTGGGAACACATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTLALLL*WWEHIY Trigger: GTATATGTGTTCCCACCACCAGAGGAGGAGAGCGAG...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCGGTTCCACGTCACATTaGCATTCTTCTCGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSGSTSH*HSSRFP Trigger: TGGAAAGCGAGAAGAATGTCAATGTGACGTGGAACC...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCACTGTGATGGCTGTTTaGGATCAGTTTGCCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSTVMAV*DQFAIL Trigger: GAGGATGGCAAACTGATCTCAAACAGCCATCACAGT...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCAGTTTCCTGGGTTTCTaGAGTGCCTCATGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSSFLGF*SASWIT Trigger: AGTGATCCATGAGGCACTTCAGAAACCCAGGAAACT...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACACAGGGAAGTTCACAGTaGTCATGTTCAGGGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTQGSSQ*SCSGSL Trigger: CAGACTCCCTGAACATGAGCACTGTGAACTTCCCTG...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAAGTACAGCTGGATGGTaGAGTGGAAAGCATTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTSTAGW*SGKHWG Trigger: ACCCCAATGCTTTCCACTCCACCATCCAGCTGTACT...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACCTTGATTGGAGCCATTaGATTTCAGGGGTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASWCYNSERMSVIHLPHHLDWSH*ISGVLW Trigger: CCACAACACCCCTGAAATCCAATGGCTCCAATCAAG...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCGCCTCATGGATCACTTaGCAGGTGAACTGTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSASWIT*QVNCFL Trigger: GAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGC...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACACCTACTTTCGTTGAATaGTGGAGGATGTGTCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTPTFVE*WRMCHV Trigger: CACGTGACACATCCTCCATCATTCAACGAAAGTAGG...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACACGTCCATTAGCCAGCTaGCAGAGACATCATTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTRPLAS*QRHHLG Trigger: TCCTAAATGATGTCTCTGTCAGCTGGCTAATGGACG...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACATGTTTGAGATCAGTTTaGCATCCTCCAGCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTCLRSV*HPPATA Trigger: TGCAGTGGCTGGAGGATGGCAAACTGATCTCAAACA...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTTTTCTCCAGTTTCCTaGGTTTCTGAAGTGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSFSPVS*VSEVPH Trigger: ATGAGGCACTTCAGAAACCCAGGAAACTGGAGAAAA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR GCA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACACTTTCAGACATCCATTaGTGCTCAGTGATGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTLSDIH*CSVMLS Trigger: ACTCAACATCACTGAGCAGCAATGGATGTCTGAAAG...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTGTTACCAAGGCTCGTaGATATTGTTTTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWCYNSERMSVIHLPHHSCYQGS*ILFSPV Trigger: AACTGGAGAAAACAATATCCACGAGCCTTGGTAACA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS TCA 90 bp | CTCGCTCTCCTCCTCTGGTGGTGGGAACACATATACCTCGGGGGCTaGGCGCTGGCCTGGGGTCTTGGTGATGGAACGCACAATGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LALLLWWWEHIYLGG*ALAWGLGDGTHNGL Trigger: AAGCCCATTGTGCGTTCCATCACCAAGACCCCAGGCCAGCGCTCAGCCCCCGAGGTATATGTGTTCCCACCACCAGAGGAGGAGAGCGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACGCCCCAGCTGGTCACTaGGCTGGTGGTGACCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASWCYNSERMSVIHLPHHAPAGH*AGGDLE Trigger: CTCAAGGTCACCACCAGCCAAGTGACCAGCTGGGGC...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACCGCTGGCCTGGGGTCTaGGTGATGGAACGCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: ASWCYNSERMSVIHLPHHRWPGV*VMERTM Trigger: CATTGTGCGTTCCATCACCAAGACCCCAGGCCAGCG...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTGTGTCCAGAGTGTCTaGGCGACCTCTAGGCGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SWCYNSERMSVIHLPHHSCVQSV*ATSRRL Trigger: CAGTCGCCTAGAGGTCGCCAAGACACTCTGGACACA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTGGCTGGTGGTGACCTaGAGTTCAGAACCAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SWCYNSERMSVIHLPHHSWLVVT*SSEPRA Trigger: TGCCCTTGGTTCTGAACTCAAGGTCACCACCAGCCA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACCCTTGGGAGGTGACCTaGCAGGTGAAGGTGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASWCYNSERMSVIHLPHHPWEVT*QVKVLS Trigger: TGAAAGCACCTTCACCTGCAAGGTCACCTCCCAAGG...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS CCA 90 bp | TACAGCTGGATGGTGGAGTGGAAAGCATTGGGGTCGCAGGATGAATaGAGTAGCTCCAAGGTGGGCTCAGTGATGTTGACAGGTCGAACT | + |
|
Preference number: 5 (lower is better) Translates to: YSWMVEWKALGSQDE*SSSKVGSVMLTGRT Trigger: AGTTCGACCTGTCAACATCACTGAGCCCACCTTGGAGCTACTCCATTCATCCTGCGACCCCAATGCTTTCCACTCCACCATCCAGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGTGGGCTCAGTGATGTaGACAGGTCGAACTAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LPGVTTVSGCLSSTFPTTVGSVM*TGRTRI Trigger: TATCCTAGTTCGACCTGTCAACATCACTGAGCCCAC...TGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCTGCTGCTCAGTGATGTaGAGTTTACTGCAGGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWCYNSERMSVIHLPHHSCCSVM*SLLQVE Trigger: CTCTACCTGCAGTAAACTCAACATCACTGAGCAGCA...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACTGCCTCATGGATCACTaGGCAGGTGAACTGTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASWCYNSERMSVIHLPHHCLMDH*AGELFS Trigger: AGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCA...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCCAAGGCTCGTGGATATaGTTTTCTCCAGTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWCYNSERMSVIHLPHHSQGSWI*FSPVSW Trigger: CCAGGAAACTGGAGAAAACAATATCCACGAGCCTTG...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS TCA 90 bp | AGAACCAAGGGCAGGGAAGTTCACAGTGCTCATGTTCAGGGAGTCTaGATACCAGGTCACAGTCACAGGACCAGGGAAGTAGTCCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RTKGREVHSAHVQGV*IPGHSHRTREVVLY Trigger: GTAAAGGACTACTTCCCTGGTCCTGTGACTGTGACCTGGTATTCAGACTCCCTGAACATGAGCACTGTGAACTTCCCTGCCCTTGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 90 bp | GGAGCCATTGGATTTCAGGGGTGTTGTGGTACTGTGATGGCTGTTTaGGATCAGTTTGCCATCCTCCAGCCACTGCACAGAGATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAIGFQGCCGTVMAV*DQFAILQPLHRDIL Trigger: GAGGATATCTCTGTGCAGTGGCTGGAGGATGGCAAACTGATCTCAAACAGCCATCACAGTACCACAACACCCCTGAAATCCAATGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS GCA 90 bp | TGGGAGGTGACCTTGCAGGTGAAGGTGCTTTCAGACATCCATTGCTaGTCAGTGATGTTGAGTTTACTGCAGGTAGAGGCTAGTTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: WEVTLQVKVLSDIHC*SVMLSLLQVEASLP Trigger: AGGCAAACTAGCCTCTACCTGCAGTAAACTCAACATCACTGAGCAGCAATGGATGTCTGAAAGCACCTTCACCTGCAAGGTCACCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGTTTGCCTTCCTCCTaGATTAGAACAGTTTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASWCYNSERMSVIHLPHHSLPSS*IRTVCA Trigger: TGCACAAACTGTTCTAATCAAGGAGGAAGGCAAACT...GTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTGTTACAACAGTGAGCGGATGTCTGTCATCCACCTTCCCCACCACAGCGAAGATGAAGAAGCCTaGATTGGAGCCATTGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: SWCYNSERMSVIHLPHHSEDEEA*IGAIGF Trigger: AAATCCAATGGCTCCAATCAAGGCTTCTTCATCTTC...GCTGTGGTGGGGAAGGTGGATGACAGACATCCGCTCACTGTTGTAACACCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS TCA 90 bp | AGCTCAAGGCTCGTGGATATTGTTTTCTCCAGTTTCCTGGGTTTCTaGAGTGCCTCATGGATCACTTGGCAGGTGAACTGTTTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSRLVDIVFSSFLGF*SASWITWQVNCFLC Trigger: ACAGAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGGAAACTGGAGAAAACAATATCCACGAGCCTTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223335.2 |
||
| CDS TCA 90 bp | TTACCAAGGCTCGTGGATATTGTTTTCTCCAGTTTCCTGGGTTTCTaGAGTGCCTCATGGATCACTTGGCAGGTGAACTGTTTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LPRLVDIVFSSFLGF*SASWITWQVNCFLC Trigger: ACAGAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGGAAACTGGAGAAAACAATATCCACGAGCCTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137336.3 |
||
| CDS TCA 72 bp | CTCCTCTGGTGGTGGGAACACATATACCTCGGGGGCTaGGCGCTGGCCTGGGGTCTTGGTGATGGAACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLWWWEHIYLGG*ALAWGLGDGTH Trigger: GTGCGTTCCATCACCAAGACCCCAGGCCAGCGCTCAGCCCCCGAGGTATATGTGTTCCCACCACCAGAGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | TGGAGGATGTGTCACGTGGCATGTGAAGTTCTTGGCTaGCTTGCCCCAGCTGGTCACTTGGCTGGTGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: WRMCHVACEVLG*LAPAGHLAGGD Trigger: GTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTCAGCCAAGAACTTCACATGCCACGTGACACATCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS GCA 72 bp | AGTCCTTTACCAGGCAGCCCAGGGTCATGGAAGCAGTaGCTTTACAGGGCTTCAAGGGGTAGAGCTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPLPGSPGSWKQ*LYRASRGRAEG Trigger: ACCCTCAGCTCTACCCCTTGAAGCCCTGTAAAGGCACTGCTTCCATGACCCTGGGCTGCCTGGTAAAGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | GACTTGCCCCAGCTGGTCACTTGGCTGGTGGTGACCTaGAGTTCAGAACCAAGGGCAGGGAAGTTCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: DLPQLVTWLVVT*SSEPRAGKFTV Trigger: CACTGTGAACTTCCCTGCCCTTGGTTCTGAACTCAAGGTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | GGATGTGTCACGTGGCATGTGAAGTTCTTGGCTGACTaGCCCCAGCTGGTCACTTGGCTGGTGGTGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: GCVTWHVKFLAD*PQLVTWLVVTL Trigger: CAAGGTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTCAGCCAAGAACTTCACATGCCACGTGACACATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 90 bp | TTCTTGGCTGACTTGCCCCAGCTGGTCACTTGGCTGGTGGTGACCTaGAGTTCAGAACCAAGGGCAGGGAAGTTCACAGTGCTCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLADLPQLVTWLVVT*SSEPRAGKFTVLMF Trigger: GAACATGAGCACTGTGAACTTCCCTGCCCTTGGTTCTGAACTCAAGGTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTCAGCCAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | GGCAGGATGGAGGTGATACTGGTTGTGGCGTTATGGTaGTGCTTAGTGTACCACTGGGATGCTGAGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GRMEVILVVALW*CLVYHWDAETG Trigger: TCCAGTCTCAGCATCCCAGTGGTACACTAAGCACCACCATAACGCCACAACCAGTATCACCTCCATCCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 90 bp | CTTTCGTTGAATGATGGAGGATGTGTCACGTGGCATGTGAAGTTCTaGGCTGACTTGCCCCAGCTGGTCACTTGGCTGGTGGTGACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLNDGGCVTWHVKF*ADLPQLVTWLVVTL Trigger: CAAGGTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTCAGCCAAGAACTTCACATGCCACGTGACACATCCTCCATCATTCAACGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | ACAGGCAGGATGGAGGTGATACTGGTTGTGGCGTTATaGTGGTGCTTAGTGTACCACTGGGATGCTGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: TGRMEVILVVAL*WCLVYHWDAET Trigger: AGTCTCAGCATCCCAGTGGTACACTAAGCACCACCATAACGCCACAACCAGTATCACCTCCATCCTGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | ATGAAGCAGTACAGCTGGATGGTGGAGTGGAAAGCATaGGGGTCGCAGGATGAATGGAGTAGCTCCAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MKQYSWMVEWKA*GSQDEWSSSKV Trigger: CACCTTGGAGCTACTCCATTCATCCTGCGACCCCAATGCTTTCCACTCCACCATCCAGCTGTACTGCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 90 bp | AATGATGGAGGATGTGTCACGTGGCATGTGAAGTTCTTGGCTGACTaGCCCCAGCTGGTCACTTGGCTGGTGGTGACCTTGAGTTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: NDGGCVTWHVKFLAD*PQLVTWLVVTLSSE Trigger: TTCTGAACTCAAGGTCACCACCAGCCAAGTGACCAGCTGGGGCAAGTCAGCCAAGAACTTCACATGCCACGTGACACATCCTCCATCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 90 bp | TGGGATGCTGAGACTGGAGTCTTCTTCTCTTGGTTCCACGTCACATaGACATTCTTCTCGCTTTCCAGGTCCACCACCAGACAGGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: WDAETGVFFSWFHVT*TFFSLSRSTTRQVS Trigger: GCTTACCTGTCTGGTGGTGGACCTGGAAAGCGAGAAGAATGTCAATGTGACGTGGAACCAAGAGAAGAAGACTCCAGTCTCAGCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | GGATTTCAGGGGTGTTGTGGTACTGTGATGGCTGTTTaGGATCAGTTTGCCATCCTCCAGCCACTGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GFQGCCGTVMAV*DQFAILQPLHR Trigger: TCTGTGCAGTGGCTGGAGGATGGCAAACTGATCTCAAACAGCCATCACAGTACCACAACACCCCTGAAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | CTGGTTGTGGCGTTATGGTGGTGCTTAGTGTACCACTaGGATGCTGAGACTGGAGTCTTCTTCTCTTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVVALWWCLVYH*DAETGVFFSWF Trigger: GAACCAAGAGAAGAAGACTCCAGTCTCAGCATCCCAGTGGTACACTAAGCACCACCATAACGCCACAACCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | AGACTGGAGTCTTCTTCTCTTGGTTCCACGTCACATTaGCATTCTTCTCGCTTTCCAGGTCCACCACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RLESSSLGSTSH*HSSRFPGPPPD Trigger: GTCTGGTGGTGGACCTGGAAAGCGAGAAGAATGTCAATGTGACGTGGAACCAAGAGAAGAAGACTCCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | TTGGAGCCATTGGATTTCAGGGGTGTTGTGGTACTGTaGTGGCTGTTTGAGATCAGTTTGCCATCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LEPLDFRGVVVL*WLFEISLPSSS Trigger: GCTGGAGGATGGCAAACTGATCTCAAACAGCCATCACAGTACCACAACACCCCTGAAATCCAATGGCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | TTGGCGACCTCTAGGCGACTGAAGATGAAGAAGCCTTaGTTGGAGCCATTGGATTTCAGGGGTGTTGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LATSRRLKMKKP*LEPLDFRGVVV Trigger: TACCACAACACCCCTGAAATCCAATGGCTCCAATCAAGGCTTCTTCATCTTCAGTCGCCTAGAGGTCGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | TGGGTTTCTGAAGTGCCTCATGGATCACTTGGCAGGTaGACTGTTTTCTCTGTGTCCAGAGTGTCTTGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: WVSEVPHGSLGR*TVFSVSRVSWR Trigger: TCGCCAAGACACTCTGGACACAGAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS GCA 72 bp | GTGTTGTGGTACTGTGATGGCTGTTTGAGATCAGTTTaGCATCCTCCAGCCACTGCACAGAGATATCCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLWYCDGCLRSV*HPPATAQRYPQ Trigger: CTGAGGATATCTCTGTGCAGTGGCTGGAGGATGGCAAACTGATCTCAAACAGCCATCACAGTACCACAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 90 bp | TGTTTTCTCCAGTTTCCTGGGTTTCTGAAGTGCCTCATGGATCACTaGGCAGGTGAACTGTTTTCTCTGTGTCCAGAGTGTCTTGGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: CFLQFPGFLKCLMDH*AGELFSLCPECLGD Trigger: GTCGCCAAGACACTCTGGACACAGAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGGAAACTGGAGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS GCA 72 bp | ACCTTGCAGGTGAAGGTGCTTTCAGACATCCATTGCTaGTCAGTGATGTTGAGTTTACTGCAGGTAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TLQVKVLSDIHC*SVMLSLLQVEA Trigger: AGCCTCTACCTGCAGTAAACTCAACATCACTGAGCAGCAATGGATGTCTGAAAGCACCTTCACCTGCAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | TACCACTGGGATGCTGAGACTGGAGTCTTCTTCTCTTaGTTCCACGTCACATTGACATTCTTCTCGCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: YHWDAETGVFFS*FHVTLTFFSLS Trigger: GGAAAGCGAGAAGAATGTCAATGTGACGTGGAACCAAGAGAAGAAGACTCCAGTCTCAGCATCCCAGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | GATGAATGGAGTAGCTCCAAGGTGGGCTCAGTGATGTaGACAGGTCGAACTAGGATAGTCCTACTTTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: DEWSSSKVGSVM*TGRTRIVLLSL Trigger: CAACGAAAGTAGGACTATCCTAGTTCGACCTGTCAACATCACTGAGCCCACCTTGGAGCTACTCCATTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | GGTGACCTTGCAGGTGAAGGTGCTTTCAGACATCCATaGCTGCTCAGTGATGTTGAGTTTACTGCAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: GDLAGEGAFRHP*LLSDVEFTAGR Trigger: TCTACCTGCAGTAAACTCAACATCACTGAGCAGCAATGGATGTCTGAAAGCACCTTCACCTGCAAGGTCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CAA 72 bp | CAGTTTCCTGGGTTTCTGAAGTGCCTCATGGATCACTaGGCAGGTGAACTGTTTTCTCTGTGTCCAGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QFPGFLKCLMDH*AGELFSLCPEC Trigger: ACACTCTGGACACAGAGAAAACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGGAAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS TCA 72 bp | CTCGTGGATATTGTTTTCTCCAGTTTCCTGGGTTTCTaGAGTGCCTCATGGATCACTTGGCAGGTGAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LVDIVFSSFLGF*SASWITWQVNC Trigger: ACAGTTCACCTGCCAAGTGATCCATGAGGCACTTCAGAAACCCAGGAAACTGGAGAAAACAATATCCACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | AGCCTTGATTGGAGCCATTGGATTTCAGGGGTGTTGTaGTACTGTGATGGCTGTTTGAGATCAGTTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLDWSHWISGVL*YCDGCLRSVCH Trigger: ATGGCAAACTGATCTCAAACAGCCATCACAGTACCACAACACCCCTGAAATCCAATGGCTCCAATCAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137336.3 ENSMUST00000223335.2 |
||
| CDS CCA 72 bp | CAATACATAGGTCCTGGAGGTCTAGCTCAAGGCTCGTaGATATTGTTTTCTCCAGTTTCCTGGGTTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QYIGPGGLAQGS*ILFSPVSWVSE Trigger: TTCAGAAACCCAGGAAACTGGAGAAAACAATATCCACGAGCCTTGAGCTAGACCTCCAGGACCTATGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223335.2 |
||