Pregenerated sensors for IGHA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095079Ensembl transcript IDs: ENSMUST00000178282.3, ENSMUST00000194738.6
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGGTTGCAAGGCCACATATGGAGGAGCCTAGTAAATCCTGAGTaGCCCTGCCCCCACCCTGTACCCCACCATCTCCATGACTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: EGLQGHIWRSLVNPE*PCPHPVPHHLHDCH Trigger: GTGGCAGTCATGGAGATGGTGGGGTACAGGGTGGGGGCAGGGGCACTCAGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAACCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | ATCCCCGCCAAGACAAGAGTGATCAGCCACAGGGCATCCTGGAGTTaGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTGGCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: IPAKTRVISHRASWS*VMSSLLLRSQPGFW Trigger: CCAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | ACCTTCATCCCCGCCAAGACAAGAGTGATCAGCCACAGGGCATCCTaGAGTTGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: TFIPAKTRVISHRAS*SWVMSSLLLRSQPG Trigger: GCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGGGGATGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | TACGTCCACTTCCTTAGTGTCTGTGAAGGGTTGCAAGGCCACATATaGAGGAGCCTAGTAAATCCTGAGTGCCCCTGCCCCCACCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: YVHFLSVCEGLQGHI*RSLVNPECPCPHPV Trigger: TACAGGGTGGGGGCAGGGGCACTCAGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAACCCTTCACAGACACTAAGGAAGTGGACGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 90 bp | AACGTGGAGGCCTTTCTCCAACCTTCATCCCCGCCAAGACAAGAGTaGTCAGCCACAGGGCATCCTGGAGTTGGGTTATGTCTTCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: NVEAFLQPSSPPRQE*SATGHPGVGLCLPF Trigger: AAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGGGGATGAAGGTTGGAGAAAGGCCTCCACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | ATCCTGGAGTTGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTaGCTTCTGGAAGATTGGGTTAAACCCAGGAAGTGCCGCCATCAT | + |
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Preference number: 1 (lower is better) Translates to: ILELGYVFPFAEVPA*LLEDWVKPRKCRHH Trigger: ATGATGGCGGCACTTCCTGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | TATGTCTTCCCTTTTGCTGAGGTCCCAGCCTGGCTTCTGGAAGATTaGGTTAAACCCAGGAAGTGCCGCCATCATTTACGTCCACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: YVFPFAEVPAWLLED*VKPRKCRHHLRPLP Trigger: AGGAAGTGGACGTAAATGATGGCGGCACTTCCTGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | AGTTGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTGGCTTCTaGAAGATTGGGTTAAACCCAGGAAGTGCCGCCATCATTTACGTC | + |
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Preference number: 1 (lower is better) Translates to: SWVMSSLLLRSQPGF*KIGLNPGSAAIIYV Trigger: GACGTAAATGATGGCGGCACTTCCTGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 90 bp | AGAAATCAGGTCCAGATCTCAAGCTTAATGACCTGGTATCGGGTCTaGAGAGGACACAAATACCATCACTTGTTCATCTTTGGCTGCAGC | + |
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Preference number: 1 (lower is better) Translates to: RNQVQISSLMTWYRV*RGHKYHHLFIFGCS Trigger: GCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTGTCCTCTTCAGACCCGATACCAGGTCATTAAGCTTGAGATCTGGACCTGATTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 90 bp | GGACTAGTGATCAGGTTAATTGCTATGATCAAAACCAGTCATCGGTaGTCAAGACTAGGCTCAGTAATGAGGATCAAACCCAGTGATCAT | + |
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Preference number: 1 (lower is better) Translates to: GLVIRLIAMIKTSHR*SRLGSVMRIKPSDH Trigger: ATGATCACTGGGTTTGATCCTCATTACTGAGCCTAGTCTTGATCACCGATGACTGGTTTTGATCATAGCAATTAACCTGATCACTAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 90 bp | ATTTTCTGGAGGAGCGGAGGGCTTTATTCTCCTTGGAAAGAAGATTaGCCCCAGCTAGCTCACTTCAGTTACTTTATTCAAACAGTATAC | + |
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Preference number: 1 (lower is better) Translates to: IFWRSGGLYSPWKED*PQLAHFSYFIQTVY Trigger: GTATACTGTTTGAATAAAGTAACTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTCCTCCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR GCA 90 bp | TGTTTGTTTTTGAGAGTAGGAATTTGTGGTTTTGCATCAATTTATTaGTCAGGAAAGTCTGTGAGTGGGCTGGGAAGTTGTCACGTCGGT | + |
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Preference number: 1 (lower is better) Translates to: CLFLRVGICGFASIY*SGKSVSGLGSCHVG Trigger: ACCGACGTGACAACTTCCCAGCCCACTCACAGACTTTCCTGAGCAATAAATTGATGCAAAACCACAAATTCCTACTCTCAAAAACAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 90 bp | GTATCGGGTCTGAAGAGGACACAAATACCATCACTTGTTCATCTTTaGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGACATTAGA | + |
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Preference number: 1 (lower is better) Translates to: VSGLKRTQIPSLVHL*LQLHICSSYVSDIR Trigger: TCTAATGTCTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTGTCCTCTTCAGACCCGATAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR GCA 90 bp | AATCCTTTGTTAATGTTTGTTTTTGAGAGTAGGAATTTGTGGTTTTaGATCAATTTATTGCTCAGGAAAGTCTGTGAGTGGGCTGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: NPLLMFVFESRNLWF*INLLLRKVCEWAGK Trigger: CTTCCCAGCCCACTCACAGACTTTCCTGAGCAATAAATTGATGCAAAACCACAAATTCCTACTCTCAAAAACAAACATTAACAAAGGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CAA 90 bp | CATCCCCGCCAAGACAAGAGTGATCAGCCACAGGGCATCCTGGAGTaGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: HPRQDKSDQPQGILE*GYVFPFAEVPAWLL Trigger: CAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAGACCCCACCATCTCCATaGCTGCCACCTGTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: RRALFSLERRLTPASSLQTPPSP*LPPVAG Trigger: GCCAGCCACAGGTGGCAGTCATGGAGATGGTGGGGT...CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTGATCAGCCACAGGGCATCCTGGAGTTGGGTTATGTCTTCCCTTTTGCTGAGCCTAGTAAATCCTaGGTGCCCCTGCCCCCACCC | + |
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Preference number: 2 (lower is better) Translates to: KSDQPQGILELGYVFPFAEPSKS*VPLPPP Trigger: GGGTGGGGGCAGGGGCACTCAGGATTTACTAGGCTC...AGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CCA 90 bp | GTTACTTGGAGCTGGGAAAGGTTCCACCCACCCACAGACATCTCAGTCCCTTTCGCTGAGGTCCCAGCCTaGCTTCTGGAAGATTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: VTWSWERFHPPTDISVPFAEVPA*LLEDWV Trigger: AACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGC...GAAAGGGACTGAGATGTCTGTGGGTGGGTGGAACCTTTCCCAGCTCCAAGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR TCA 90 bp | CGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAGCCGCCAAGACAAGAGTaGTCAGCCACAGGGCATCCT | + |
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Preference number: 2 (lower is better) Translates to: RRALFSLERRLTPASSLQPPRQE*SATGHP Trigger: AGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGG...CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CAA 90 bp | AGTGCCGCCATCATTTACGTCCACTTCCTTAGTGTCTGTGAAGGGTaGCAAGGCCACATATGGAGGAGCCTAGTAAATCCTGAGTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SAAIIYVHFLSVCEG*QGHIWRSLVNPECP Trigger: GGGGCACTCAGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAACCCTTCACAGACACTAAGGAAGTGGACGTAAATGATGGCGGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR GCA 90 bp | CAAGGTTCACAGCCAGGACCAGGGTTTGCTGTTCAGTATTTGCCAAGGGTGCTCGTGTCTGTGAAGGGTTaGAAGGCCACATATGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QGSQPGPGFAVQYLPRVLVSVKG*KATYGG Trigger: TCCTCCATATGTGGCCTTGCAACCCTTCACAGACAC...GAGCACCCTTGGCAAATACTGAACAGCAAACCCTGGTCCTGGCTGTGAACCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CCA 90 bp | GTTACTTGGAGCTGGGAAAGGTTCCACCCACCCACAGACATCTCAGTCCCTTTCAGGAAAGTCTGTGAGTaGGCTGGGAAGTTGTCACGT | + |
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Preference number: 2 (lower is better) Translates to: VTWSWERFHPPTDISVPFRKVCE*AGKLSR Trigger: ACGTGACAACTTCCCAGCCCACTCACAGACTTTCCT...GAAAGGGACTGAGATGTCTGTGGGTGGGTGGAACCTTTCCCAGCTCCAAGTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CCA 90 bp | CGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAGTCCCAGCCTGGCTTCTaGAAGATTGGGTTAAACCCA | + |
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Preference number: 2 (lower is better) Translates to: RRALFSLERRLTPASSLQSQPGF*KIGLNP Trigger: TGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGA...CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTACCTGGTATCGGGTCTaGAGAGGACACAAATACCAT | + |
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Preference number: 2 (lower is better) Translates to: ERRALFSLERRLTPASSLTWYRV*RGHKYH Trigger: ATGGTATTTGTGTCCTCTTCAGACCCGATACCAGGT...AAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR TCA 90 bp | GCAAATGTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCAGGATCAGGACCCAGTaGCCAGTATCATGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ANVQIVQGDISSFEVQTARIRTQ*PVSWPS Trigger: ACTGGGCCATGATACTGGTCACTGGGTCCTGATCCT...GGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCACATTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR GCA 90 bp | GCAAATGTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCCTAGTAAATCCTGAGTaGCCCTGCCCCCACCCTGTA | + |
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Preference number: 2 (lower is better) Translates to: ANVQIVQGDISSFEVQTALVNPE*PCPHPV Trigger: TACAGGGTGGGGGCAGGGGCACTCAGGATTTACTAG...GGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCACATTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CAA 90 bp | ATGTTTGTTTTTGAGAGTAGGAATTTGTGGTTTTGCATCAATTTATaGCTCAGGAAAGTCTGTGAGTGGGCTGGGAAGTTGTCACGTCGG | + |
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Preference number: 2 (lower is better) Translates to: MFVFESRNLWFCINL*LRKVCEWAGKLSRR Trigger: CCGACGTGACAACTTCCCAGCCCACTCACAGACTTTCCTGAGCAATAAATTGATGCAAAACCACAAATTCCTACTCTCAAAAACAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CAA 90 bp | CATTTTCTGGAGGAGCGGAGGGCTTTATTCTCCTTGGAAAGAAGATaGACCCCAGCTAGCTCACTTCAGTTACTTTATTCAAACAGTATA | + |
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Preference number: 2 (lower is better) Translates to: HFLEERRALFSLERR*TPASSLQLLYSNSI Trigger: TATACTGTTTGAATAAAGTAACTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTCCTCCAGAAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCTCAAAATTGCAAGGCCACATATaGAGGAGCCTAGTAAATCCT | + |
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Preference number: 2 (lower is better) Translates to: VQIVQGDISSFEVQTASKLQGHI*RSLVNP Trigger: AGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAA...TTTTGAGGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CCA 90 bp | CATCTTTGGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGACATTAGACAACTTAGCTCTGAAACGTaGAGGCCTTTCTCCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: HLWLQLHICSSYVSDIRQLSSET*RPFSNL Trigger: AAGGTTGGAGAAAGGCCTCCACGTTTCAGAGCTAAG...TTGTCTAATGTCTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | CCCGCCAAGACAAGAGTGATCAGCCACAGGGCATCCTaGAGTTGGGTTATGTCTTCCCTTTTGCTGAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: PAKTRVISHRAS*SWVMSSLLLRS Trigger: GGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTGGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTTCACAGCCAGGACCAGGGTTTGCTGTTCAGTATTTGCCAAGGGTGCTCGTTATGTCTTCCCTTTaGCTGAGGTCCCAGCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: QGSQPGPGFAVQYLPRVLVMSSL*LRSQPG Trigger: GCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAAC...GAGCACCCTTGGCAAATACTGAACAGCAAACCCTGGTCCTGGCTGTGAACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | TTCCTTAGTGTCTGTGAAGGGTTGCAAGGCCACATATaGAGGAGCCTAGTAAATCCTGAGTGCCCCTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: FLSVCEGLQGHI*RSLVNPECPCP Trigger: GGGGCAGGGGCACTCAGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAACCCTTCACAGACACTAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | CCTTTTGCTGAGGTCCCAGCCTGGCTTCTGGAAGATTaGGTTAAACCCAGGAAGTGCCGCCATCATTTACGT | + |
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Preference number: 3 (lower is better) Translates to: PFAEVPAWLLED*VKPRKCRHHLR Trigger: ACGTAAATGATGGCGGCACTTCCTGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGCAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | AAGACAAGAGTGATCAGCCACAGGGCATCCTGGAGTTaGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: KTRVISHRASWS*VMSSLLLRSQP Trigger: AGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | TTGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCCTaGCTTCTGGAAGATTGGGTTAAACCCAGGAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: LGYVFPFAEVPA*LLEDWVKPRKC Trigger: GCACTTCCTGGGTTTAACCCAATCTTCCAGAAGCCAGGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CAA 90 bp | CAAGGTTCACAGCCAGGACCAGGGTTTGCTGTTCAGTATTTGCCAAGGGTGCTCCACAAATACCATCACTaGTTCATCTTTGGCTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: QGSQPGPGFAVQYLPRVLHKYHH*FIFGCS Trigger: GCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTG...GAGCACCCTTGGCAAATACTGAACAGCAAACCCTGGTCCTGGCTGTGAACCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAGATCACTTGTTCATCTTaGGCTGCAGCTACACATATG | + |
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Preference number: 3 (lower is better) Translates to: RRALFSLERRLTPASSLQITCSS*AAATHM Trigger: CATATGTGTAGCTGCAGCCAAAGATGAACAAGTGAT...CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAATGTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCTTTGCTGTTCAGTATTaGCCAAGGGTGCTCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: ANVQIVQGDISSFEVQTAFAVQY*PRVLTE Trigger: CTCTGTGAGCACCCTTGGCAAATACTGAACAGCAAA...GGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCACATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR-3UTR CAA 90 bp | CGGAGGGCTTTATTCTCCTTGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAGGAGACATTTCTTCTTTaGAAGTTCAAACAGCCTCAA | + |
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Preference number: 3 (lower is better) Translates to: RRALFSLERRLTPASSLQETFLL*KFKQPQ Trigger: TTGAGGCTGTTTGAACTTCAAAAGAAGAAATGTCTC...CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 72 bp | AGGAGCGGAGGGCTTTATTCTCCTTGGAAAGAAGATTaGCCCCAGCTAGCTCACTTCAGTTACTTTATTCAA | + |
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Preference number: 3 (lower is better) Translates to: RSGGLYSPWKED*PQLAHFSYFIQ Trigger: TTGAATAAAGTAACTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | TACTTTATTCAAACAGTATACAGAGTTACTTGGAGCTaGGAAAGGTTCCACCCACCCACAGACATCTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: YFIQTVYRVTWS*ERFHPPTDISV Trigger: GACTGAGATGTCTGTGGGTGGGTGGAACCTTTCCCAGCTCCAAGTAACTCTGTATACTGTTTGAATAAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 72 bp | GTCCAGATCTCAAGCTTAATGACCTGGTATCGGGTCTaGAGAGGACACAAATACCATCACTTGTTCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: VQISSLMTWYRV*RGHKYHHLFIF Trigger: AAAGATGAACAAGTGATGGTATTTGTGTCCTCTTCAGACCCGATACCAGGTCATTAAGCTTGAGATCTGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | TTCAGTTACTTTATTCAAACAGTATACAGAGTTACTTaGAGCTGGGAAAGGTTCCACCCACCCACAGACATC | + |
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Preference number: 3 (lower is better) Translates to: FSYFIQTVYRVT*SWERFHPPTDI Trigger: GATGTCTGTGGGTGGGTGGAACCTTTCCCAGCTCCAAGTAACTCTGTATACTGTTTGAATAAAGTAACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR TCA 72 bp | ATCAGGTTAATTGCTATGATCAAAACCAGTCATCGGTaGTCAAGACTAGGCTCAGTAATGAGGATCAAACCC | + |
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Preference number: 3 (lower is better) Translates to: IRLIAMIKTSHR*SRLGSVMRIKP Trigger: GGGTTTGATCCTCATTACTGAGCCTAGTCTTGATCACCGATGACTGGTTTTGATCATAGCAATTAACCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | CCACCCACCCACAGACATCTCAGTCCCTTTCAACCATaGCTAGCCATTATTAAAAGTAAGAATTCTAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: PPTHRHLSPFQP*LAIIKSKNSKF Trigger: AAACTTAGAATTCTTACTTTTAATAATGGCTAGCCATGGTTGAAAGGGACTGAGATGTCTGTGGGTGGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR GCA 72 bp | AGAGGACACAAATACCATCACTTGTTCATCTTTGGCTaGAGCTACACATATGTTCAAGTTATGTCTCAGACA | + |
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Preference number: 3 (lower is better) Translates to: RGHKYHHLFIFG*SYTYVQVMSQT Trigger: TGTCTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTGTCCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| 3UTR CCA 72 bp | CTGAAGAGGACACAAATACCATCACTTGTTCATCTTTaGCTGCAGCTACACATATGTTCAAGTTATGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LKRTQIPSLVHL*LQLHICSSYVS Trigger: TGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTGTCCTCTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | GGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTGAGCTGGCCGCTGCAGTaGCAGGCTGGGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GILWMSTEFISGVGTGRVSWPLQ*QAGMAG Trigger: TCCTGCCATCCCAGCCTGTCACTGCAGCGGCCAGCT...CACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | ATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGAGATCCACAGGCTGGCACCTaGGGCCTCTTCCTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRMSGQDQGLMTMTEVRDPQAGT*GLFLQD Trigger: ATCCTGGAGGAAGAGGCCCCAGGTGCCAGCCTGTGG...ATCTCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | GTTATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGAGGAAGGTCACAGTGGTaGGCCACAGGCTGGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIRMSGQDQGLMTMTEVRGRSQW*ATGWHL Trigger: CAGGTGCCAGCCTGTGGCCCACCACTGTGACCTTCC...TCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAATAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | GTTATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGATGGAGGGCTCCCAGGTaGAGACAGCTCCCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIRMSGQDQGLMTMTEVRWRAPR*RQLPQD Trigger: ATCCTGAGGGAGCTGTCTTCACCTGGGAGCCCTCCA...TCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAATAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGAGATGCTGCAGTGACAGGCTaGGATGGCAGGAAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IRMSGQDQGLMTMTEVRDAAVTG*DGRKED Trigger: GTCCTCCTTCCTGCCATCCCAGCCTGTCACTGCAGC...ATCTCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | ATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGAGATTTGTCACCAGGTAGGTaGTGGCTCCCTCGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRMSGQDQGLMTMTEVRDLSPGR*WLPRLA Trigger: AGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAA...ATCTCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | GTATTTGCCAAGGGTGCTCACAGAGGCCAAATGTTTAGAAATCAGGTCCAGATCAGCTGGCCGCTGCAGTaGCAGGCTGGGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFAKGAHRGQMFRNQVQISWPLQ*QAGMAG Trigger: TCCTGCCATCCCAGCCTGTCACTGCAGCGGCCAGCT...GATCTGGACCTGATTTCTAAACATTTGGCCTCTGTGAGCACCCTTGGCAAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR GCA 90 bp | GGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTGTCAAGAGCTGGCCGCTaGAGTGACAGGCTGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GILWMSTEFISGVGTGRVSRAGR*SDRLGW Trigger: CCATCCCAGCCTGTCACTGCAGCGGCCAGCTCTTGA...CACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | GATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTGGCGCTGCAGTGACAGGCTaGGATGGCAGGAAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTLDEHRVYFRSRDRQGGAAVTG*DGRKED Trigger: GTCCTCCTTCCTGCCATCCCAGCCTGTCACTGCAGC...GCCACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | GATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTGGCTTGTCACCAGGTAGGTaGTGGCTCCCTCGCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DTLDEHRVYFRSRDRQGGLSPGR*WLPRLA Trigger: AGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAA...GCCACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| 3UTR CAA 72 bp | CAAGACAAGAGTGATCAGCCACAGGGCATCCTGGAGTaGGGTTATGTCTTCCCTTTTGCTGAGGTCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDKSDQPQGILE*GYVFPFAEVPA Trigger: GGCTGGGACCTCAGCAAAAGGGAAGACATAACCCAACTCCAGGATGCCCTGTGGCTGATCACTCTTGTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| 3UTR CAA 72 bp | GTGATCAGGACCAAGGTTCACAGCCAGGACCAGGGTTaGCTGTTCAGTATTTGCCAAGGGTGCTCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRTKVHSQDQG*LFSICQGCSQR Trigger: CCTCTGTGAGCACCCTTGGCAAATACTGAACAGCAAACCCTGGTCCTGGCTGTGAACCTTGGTCCTGATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | AGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTTGTGAGGCTGGCATCTaGACCCAGGAGCAGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDTLDEHRVYFRSRDRQGCEAGI*TQEQVL Trigger: GAGGACCTGCTCCTGGGTTCAGATGCCAGCCTCACA...ACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR GCA 90 bp | GTTACTTGGAGCTGGGAAAGGTTCCACCCACCCACAGACATCTCAGTCCCTTTCAGCTCCTCATTTCCATaGAGCCATCGCACCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VTWSWERFHPPTDISVPFSSSFP*SHRTST Trigger: AGTGCTGGTGCGATGGCTGCATGGAAATGAGGAGCT...GAAAGGGACTGAGATGTCTGTGGGTGGGTGGAACCTTTCCCAGCTCCAAGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | AGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTTGGGCACTCGACAGCTaGCAGGGTCAACTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RDTLDEHRVYFRSRDRQGWALDS*QGQLAA Trigger: AGCAGCCAGTTGACCCTGCCAGCTGTCGAGTGCCCA...ACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACTGGAGGGCTCCCAGGTaGAGACAGCTCCCTCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WKCRDTLDEHRVYFRSRDWRAPR*RQLPQD Trigger: ATCCTGAGGGAGCTGTCTTCACCTGGGAGCCCTCCA...GTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACTTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | GCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGCAGGTGGACCTGGGGTaGGAAGGTGTTCACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGILWMSTEFISGVGTGRQVDLG*EGVHCD Trigger: ATCACAGTGAACACCTTCCCACCCCAGGTCCACCTG...CCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR TCA 90 bp | TGGAAGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACCGATGGTCTTCTGGGTaGAGTTCATGGGCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKCRDTLDEHRVYFRSRDRWSSG*SSWARP Trigger: AGGCCTTGCCCATGAACTTCACCCAGAAGACCATCG...GTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGCTTTCTTCTGCACTaGATCCTTCCCAGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGILWMSTEFISGVGTGSFLLH*ILPSGG Trigger: CCCTCCACTGGGAAGGATGCAGTGCAGAAGAAAGCT...GCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCCAAGGGTGCTCACAGAGGCCAAATGTTTAGAAATCAGGTCCAGATCTCACAGGTGGACCTGGGGTaGGAAGGTGTTCACTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FAKGAHRGQMFRNQVQISQVDLG*EGVHCD Trigger: ATCACAGTGAACACCTTCCCACCCCAGGTCCACCTG...TGAGATCTGGACCTGATTTCTAAACATTTGGCCTCTGTGAGCACCCTTGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | CATCACTTGTTCATCTTTGGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGTGTGAGGCTGGCATCTaGACCCAGGAGCAGGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHLFIFGCSYTYVQVMSQCEAGI*TQEQVL Trigger: GAGGACCTGCTCCTGGGTTCAGATGCCAGCCTCACA...CTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | TGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGCATTCAGAGTACATGTaGGGCTGGCATCTGAACCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRDTLDEHRVYFRSRDRQHSEYM*GWHLNP Trigger: TGGGTTCAGATGCCAGCCTCACATGTACTCTGAATG...CTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR GCA 90 bp | CATCACTTGTTCATCTTTGGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGTCAAGAGCTGGCCGCTaGAGTGACAGGCTGGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: HHLFIFGCSYTYVQVMSQSRAGR*SDRLGW Trigger: CCATCCCAGCCTGTCACTGCAGCGGCCAGCTCTTGA...CTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR GCA 90 bp | AGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTTGCACAGCTTTCTTCTaGACTGCATCCTTCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDTLDEHRVYFRSRDRQGCTAFF*TASFPV Trigger: CACTGGGAAGGATGCAGTGCAGAAGAAAGCTGTGCA...ACCCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGAGCTCCTCATTTCCATaGAGCCATCGCACCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KCRDTLDEHRVYFRSRDRSSSFP*SHRTST Trigger: AGTGCTGGTGCGATGGCTGCATGGAAATGAGGAGCT...CCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | CATCACTTGTTCATCTTTGGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGTGGGCACTCGACAGCTaGCAGGGTCAACTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHLFIFGCSYTYVQVMSQWALDS*QGQLAA Trigger: AGCAGCCAGTTGACCCTGCCAGCTGTCGAGTGCCCA...CTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACACGGTCGATGGTCTTCTaGGTGAAGTTCATGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSAGILWMSTEFISGVGTRSMVF*VKFMGK Trigger: CTTGCCCATGAACTTCACCCAGAAGACCATCGACCG...TGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| 3UTR CAA 72 bp | CTTCATTTTCTGGAGGAGCGGAGGGCTTTATTCTCCTaGGAAAGAAGATTGACCCCAGCTAGCTCACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFLEERRALFS*ERRLTPASSLQ Trigger: CTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTCCTCCAGAAAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR GCA 90 bp | ATTAGAATGAGTGGCCAGGACCAGGGCCTCATGACCATGACTGAGGTCAGAGATAGTTGTAACAGTGAGTaGTGTGCTGTAGAACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRMSGQDQGLMTMTEVRDSCNSE*CAVEQA Trigger: AGCTTGTTCTACAGCACAGCACTCACTGTTACAACT...ATCTCTGACCTCAGTCATGGTCATGAGGCCCTGGTCCTGGCCACTCATTCTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | TATTTGCCAAGGGTGCTCACAGAGGCCAAATGTTTAGAAATCAGGTCCAGATCTCGGTCGATGGTCTTCTaGGTGAAGTTCATGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLPRVLTEAKCLEIRSRSRSMVF*VKFMGK Trigger: CTTGCCCATGAACTTCACCCAGAAGACCATCGACCG...AGATCTGGACCTGATTTCTAAACATTTGGCCTCTGTGAGCACCCTTGGCAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR TCA 90 bp | GTAGGAATTTGTGGTTTTGCATCAATTTATTGCTCAGGAAAGTCTGTGAGTGGGCGATGGTCTTCTGGGTaGAGTTCATGGGCAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGICGFASIYCSGKSVSGRWSSG*SSWARP Trigger: AGGCCTTGCCCATGAACTTCACCCAGAAGACCATCG...CCCACTCACAGACTTTCCTGAGCAATAAATTGATGCAAAACCACAAATTCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCGTGGGAAGTTTACGGTaGTTATATCCTTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAGILWMSTEFISGVGTGVGSLR*LYPSHS Trigger: AGAGTGGGAAGGATATAACCACCGTAAACTTCCCAC...GCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| CDS-3UTR CCA 90 bp | TGCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGTTCACATCCAATTCTTaGACGGCGTTAGAGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CRDTLDEHRVYFRSRDRQFTSNS*TALESC Trigger: ACATGACTCTAACGCCGTCCAAGAATTGGATGTGAA...CTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
||
| 3UTR CAA 72 bp | ATCATTTACGTCCACTTCCTTAGTGTCTGTGAAGGGTaGCAAGGCCACATATGGAGGAGCCTAGTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: IIYVHFLSVCEG*QGHIWRSLVNP Trigger: AGGATTTACTAGGCTCCTCCATATGTGGCCTTGCAACCCTTCACAGACACTAAGGAAGTGGACGTAAATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| 3UTR CAA 72 bp | GAGGAGCGGAGGGCTTTATTCTCCTTGGAAAGAAGATaGACCCCAGCTAGCTCACTTCAGTTACTTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: EERRALFSLERR*TPASSLQLLYS Trigger: TGAATAAAGTAACTGAAGTGAGCTAGCTGGGGTCAATCTTCTTTCCAAGGAGAATAAAGCCCTCCGCTCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR GCA 90 bp | ACAAATACCATCACTTGTTCATCTTTGGCTGCAGCTACACATATGTTCAAGTTAAGCTTTCTTCTGCACTaGATCCTTCCCAGTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNTITCSSLAAATHMFKLSFLLH*ILPSGG Trigger: CCCTCCACTGGGAAGGATGCAGTGCAGAAGAAAGCT...TAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATGGTATTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CCA 90 bp | GCAAATGTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCGTGGGAAGTTTACGGTaGTTATATCCTTCCCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANVQIVQGDISSFEVQTAVGSLR*LYPSHS Trigger: AGAGTGGGAAGGATATAACCACCGTAAACTTCCCAC...GGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCACATTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| 3UTR CAA 72 bp | TCTGAAGAGGACACAAATACCATCACTTGTTCATCTTaGGCTGCAGCTACACATATGTTCAAGTTATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SEEDTNTITCSS*AAATHMFKLCL Trigger: GAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATGAACAAGTGATGGTATTTGTGTCCTCTTCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS GCA 90 bp | CGGATTCTCCTTCTGGGCACTCGACAGCTGGCAGGGTCAACTGGCTaGTCATGGTGTACCCTCCCCCAGAGGCCAGGGCAGGTGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RILLLGTRQLAGSTG*SWCTLPQRPGQVGS Trigger: ACTTCCCACCTGCCCTGGCCTCTGGGGGAGGGTACACCATGAGCAGCCAGTTGACCCTGCCAGCTGTCGAGTGCCCAGAAGGAGAATCCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS GCA 90 bp | CACACTGTAGCAGCCGCAGGAATTCTGCACAGCTTTCTTCTGCACTaGATCCTTCCCAGTGGAGGGCTCCCAGGTGAAGACAGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTVAAAGILHSFLLH*ILPSGGLPGEDSSL Trigger: GAGGGAGCTGTCTTCACCTGGGAGCCCTCCACTGGGAAGGATGCAGTGCAGAAGAAAGCTGTGCAGAATTCCTGCGGCTGCTACAGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS CCA 90 bp | CAACTGGCTGCTCATGGTGTACCCTCCCCCAGAGGCCAGGGCAGGTaGGAAGTTTACGGTGGTTATATCCTTCCCACTCTTTCCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLAAHGVPSPRGQGR*EVYGGYILPTLSPG Trigger: ACCTGGGGAAAGAGTGGGAAGGATATAACCACCGTAAACTTCCCACCTGCCCTGGCCTCTGGGGGAGGGTACACCATGAGCAGCCAGTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS CCA 90 bp | AGAGTTCAGCTGATACACGCAACACGCTTGTCACCAGGTAGGTGGTaGCTCCCTCGCCTGGCTCCTTTAGGGGCTCAAACACTAGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVQLIHATRLSPGRW*LPRLAPLGAQTLGS Trigger: GCTACCTAGTGTTTGAGCCCCTAAAGGAGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAGCTGAACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS GCA 90 bp | CGGTGGTTATATCCTTCCCACTCTTTCCCCAGGTCACATTCATCGTaGCGGAAGGGAAGTAATCGTGAATCAGGCAGCCGATTATCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RWLYPSHSFPRSHSS*RKGSNRESGSRLSL Trigger: CAGTGATAATCGGCTGCCTGATTCACGATTACTTCCCTTCCGGCACGATGAATGTGACCTGGGGAAAGAGTGGGAAGGATATAACCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS CCA 90 bp | GGAGGACAAGGAGGAGGAGGACCAGAGCACTTCACATCCAATTCTTaGACGGCGTTAGAGTCATGTTGCACGGAACATTTCACGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGQGGGGPEHFTSNS*TALESCCTEHFTDS Trigger: AGAATCCGTGAAATGTTCCGTGCAACATGACTCTAACGCCGTCCAAGAATTGGATGTGAAGTGCTCTGGTCCTCCTCCTCCTTGTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
||
| CDS-3UTR CAA 90 bp | GTGCAGATTGTCCAGGGAGACATTTCTTCTTTTGAAGTTCAAACAGCCTCAAAATACTGGGGGACCTCTTaGCTGCCAAACGGGCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VQIVQGDISSFEVQTASKYWGTS*LPNGPR Trigger: TCGAGGCCCGTTTGGCAGCAAAGAGGTCCCCCAGTA...TTTTGAGGCTGTTTGAACTTCAAAAGAAGAAATGTCTCCCTGGACAATCTGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
||
| CDS-3UTR CAA 90 bp | GCAGGGATACTTTGGATGAGCACAGAGTTTATTTCAGGAGTAGGGACAGGCAGGGTGTTCACTGTGATTTaGGCAATTGTGCCAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: AGILWMSTEFISGVGTGRVFTVI*AIVPVK Trigger: CTTAACTGGCACAATTGCCAAAATCACAGTGAACAC...CCTGCCTGTCCCTACTCCTGAAATAAACTCTGTGCTCATCCAAAGTATCCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178282.3 |
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| CDS-3UTR CAA 90 bp | CATCTTTGGCTGCAGCTACACATATGTTCAAGTTATGTCTCAGACATTAGACAAGTGTTCACTGTGATTTaGGCAATTGTGCCAGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: HLWLQLHICSSYVSDIRQVFTVI*AIVPVK Trigger: CTTAACTGGCACAATTGCCAAAATCACAGTGAACAC...TTGTCTAATGTCTGAGACATAACTTGAACATATGTGTAGCTGCAGCCAAAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194738.6 |
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| CDS GCA 72 bp | CTTCTGGGCACTCGACAGCTGGCAGGGTCAACTGGCTaGTCATGGTGTACCCTCCCCCAGAGGCCAGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGTRQLAGSTG*SWCTLPQRPGQ Trigger: CTGCCCTGGCCTCTGGGGGAGGGTACACCATGAGCAGCCAGTTGACCCTGCCAGCTGTCGAGTGCCCAGAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CCA 72 bp | TCCTCAAGAGCTGGCCGCTGCAGTGACAGGCTGGGATaGCAGGAAGGAGGACAAGGAGGACAAGGAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SSRAGRCSDRLG*QEGGQGGQGGG Trigger: TCCTCCTCCTTGTCCTCCTTGTCCTCCTTCCTGCCATCCCAGCCTGTCACTGCAGCGGCCAGCTCTTGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CCA 72 bp | CAGCTGATACACGCAACACGCTTGTCACCAGGTAGGTaGTGGCTCCCTCGCCTGGCTCCTTTAGGGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: QLIHATRLSPGR*WLPRLAPLGAQ Trigger: TTGAGCCCCTAAAGGAGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 90 bp | ACTGGTCACCCTGTTTCCAGAGTTCAGCTGATACACGCAACACGCTaGTCACCAGGTAGGTGGTGGCTCCCTCGCCTGGCTCCTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGHPVSRVQLIHATR*SPGRWWLPRLAPLG Trigger: CCCTAAAGGAGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAGCTGAACTCTGGAAACAGGGTGACCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS GCA 72 bp | GCAGCCGCAGGAATTCTGCACAGCTTTCTTCTGCACTaGATCCTTCCCAGTGGAGGGCTCCCAGGTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AAAGILHSFLLH*ILPSGGLPGED Trigger: GTCTTCACCTGGGAGCCCTCCACTGGGAAGGATGCAGTGCAGAAGAAAGCTGTGCAGAATTCCTGCGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CCA 72 bp | CTGATACACGCAACACGCTTGTCACCAGGTAGGTGGTaGCTCCCTCGCCTGGCTCCTTTAGGGGCTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: LIHATRLSPGRW*LPRLAPLGAQT Trigger: TGTTTGAGCCCCTAAAGGAGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 72 bp | CCTGTTTCCAGAGTTCAGCTGATACACGCAACACGCTaGTCACCAGGTAGGTGGTGGCTCCCTCGCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVSRVQLIHATR*SPGRWWLPRLA Trigger: AGCCAGGCGAGGGAGCCACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAGCTGAACTCTGGAAACAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CCA 72 bp | GTCATGTTGCACGGAACATTTCACGGATTCTCCTTCTaGGCACTCGACAGCTGGCAGGGTCAACTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VMLHGTFHGFSF*ALDSWQGQLAA Trigger: AGCAGCCAGTTGACCCTGCCAGCTGTCGAGTGCCCAGAAGGAGAATCCGTGAAATGTTCCGTGCAACATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 72 bp | TTTCCATGCAGCCATCGCACCAGCACTTCTTTAGGGTaGAAAGCTCGCACCAGGCATGTCAGGGACACGAGC | + |
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Preference number: 6 (lower is better) Translates to: FPCSHRTSTSLG*KARTRHVRDTS Trigger: GCTCGTGTCCCTGACATGCCTGGTGCGAGCTTTCAACCCTAAAGAAGTGCTGGTGCGATGGCTGCATGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 90 bp | AGCTCCTCATTTCCATGCAGCCATCGCACCAGCACTTCTTTAGGGTaGAAAGCTCGCACCAGGCATGTCAGGGACACGAGCTCATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSFPCSHRTSTSLG*KARTRHVRDTSSFR Trigger: CCTGAATGAGCTCGTGTCCCTGACATGCCTGGTGCGAGCTTTCAACCCTAAAGAAGTGCTGGTGCGATGGCTGCATGGAAATGAGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS TCA 72 bp | GCAGGAGTACTGGTCACCCTGTTTCCAGAGTTCAGCTaGTACACGCAACACGCTTGTCACCAGGTAGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: AGVLVTLFPEFS*YTQHACHQVGG Trigger: ACCACCTACCTGGTGACAAGCGTGTTGCGTGTATCAGCTGAACTCTGGAAACAGGGTGACCAGTACTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS GCA 72 bp | TATCCTTCCCACTCTTTCCCCAGGTCACATTCATCGTaGCGGAAGGGAAGTAATCGTGAATCAGGCAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: YPSHSFPRSHSS*RKGSNRESGSR Trigger: TCGGCTGCCTGATTCACGATTACTTCCCTTCCGGCACGATGAATGTGACCTGGGGAAAGAGTGGGAAGGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 90 bp | AGGAGGACAAGGAGGAGGAGGACCAGAGCACTTCACATCCAATTCTaGGACGGCGTTAGAGTCATGTTGCACGGAACATTTCACGGATTC | + |
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Preference number: 6 (lower is better) Translates to: RRTRRRRTRALHIQF*DGVRVMLHGTFHGF Trigger: GAATCCGTGAAATGTTCCGTGCAACATGACTCTAACGCCGTCCAAGAATTGGATGTGAAGTGCTCTGGTCCTCCTCCTCCTTGTCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CCA 72 bp | GGAGGAGGAGGACCAGAGCACTTCACATCCAATTCTTaGACGGCGTTAGAGTCATGTTGCACGGAACATTTC | + |
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Preference number: 6 (lower is better) Translates to: GGGGPEHFTSNS*TALESCCTEHF Trigger: GAAATGTTCCGTGCAACATGACTCTAACGCCGTCCAAGAATTGGATGTGAAGTGCTCTGGTCCTCCTCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 72 bp | AGGTGGACCTGGGGTGGGAAGGTGTTCACTGTGATTTaGGCAATTGTGCCAGTTAAGGTGTCAGACTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: RWTWGGKVFTVI*AIVPVKVSDSG Trigger: TCCTGAGTCTGACACCTTAACTGGCACAATTGCCAAAATCACAGTGAACACCTTCCCACCCCAGGTCCACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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| CDS CAA 72 bp | AGGAGGAGGAGGACCAGAGCACTTCACATCCAATTCTaGGACGGCGTTAGAGTCATGTTGCACGGAACATTT | + |
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Preference number: 6 (lower is better) Translates to: RRRRTRALHIQF*DGVRVMLHGTF Trigger: AAATGTTCCGTGCAACATGACTCTAACGCCGTCCAAGAATTGGATGTGAAGTGCTCTGGTCCTCCTCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178282.3 ENSMUST00000194738.6 |
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