Pregenerated sensors for IGFLR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036826Ensembl transcript IDs: ENSMUST00000043850.14, ENSMUST00000172251.2
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTCAGGAGCAGCACTGCCACCGCCACTGTCCAGAGAAGCCAGCTaGGCCCCATCTCAGCAGAGCCTGCAGCTTGAGGGCTGTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: GSGAALPPPLSREAS*APSQQSLQLEGCDH Trigger: GTGGTCACAGCCCTCAAGCTGCAGGCTCTGCTGAGATGGGGCCCAGCTGGCTTCTCTGGACAGTGGCGGTGGCAGTGCTGCTCCTGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172251.2 |
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| CDS TCA 90 bp | GGCTTCTTTCTACACTGCTTGTGGGTTCTACCAGGGCTCTCCACGTaGGCTGGGGCTGCGGCGGCTCCGCTGCTACACTGGCTACACAGC | + |
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Preference number: 5 (lower is better) Translates to: GFFLHCLWVLPGLST*AGAAAAPLLHWLHS Trigger: GCTGTGTAGCCAGTGTAGCAGCGGAGCCGCCGCAGCCCCAGCTCACGTGGAGAGCCCTGGTAGAACCCACAAGCAGTGTAGAAAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043850.14 |
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| CDS GCA 90 bp | TTCTACCAGGGCTCTCCACGTGAGCTGGGGCTGCGGCGGCTCCGCTaGTACACTGGCTACACAGCTCTGTGCCATTGGGGTTGCAATACC | + |
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Preference number: 5 (lower is better) Translates to: FYQGSPRELGLRRLR*YTGYTALCHWGCNT Trigger: GGTATTGCAACCCCAATGGCACAGAGCTGTGTAGCCAGTGTAGCAGCGGAGCCGCCGCAGCCCCAGCTCACGTGGAGAGCCCTGGTAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 90 bp | CGCCACTGTCCAGAGAAGCCAGCTGGGCCCCATCTCAGCAGAGCCTaGAGCTTGAGGGCTGTGACCACTTCCACCCACACTGTTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: RHCPEKPAGPHLSRA*SLRAVTTSTHTVSA Trigger: TGCAGAAACAGTGTGGGTGGAAGTGGTCACAGCCCTCAAGCTGCAGGCTCTGCTGAGATGGGGCCCAGCTGGCTTCTCTGGACAGTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172251.2 |
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| CDS GCA 90 bp | CGTGATCAGGACATGCAGGAGGCCCAAAGCGTTGCAGGCAGCGGCTaGAGCACCTCTTGTCAGAGTTCCAGTACTCAAGGTGGCCACAGA | + |
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Preference number: 5 (lower is better) Translates to: RDQDMQEAQSVAGSG*STSCQSSSTQGGHR Trigger: TCTGTGGCCACCTTGAGTACTGGAACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATGTCCTGATCACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 90 bp | GCTGAGACAAAACCTGGTCGGCTGGAGACCTCATTCTTGGTTGTCTaGCCAAGGCTCCACCTCCCAGGTGAGCTAGAGGCACCTGCGTCT | + |
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Preference number: 5 (lower is better) Translates to: AETKPGRLETSFLVV*PRLHLPGELEAPAS Trigger: AGACGCAGGTGCCTCTAGCTCACCTGGGAGGTGGAGCCTTGGGCAGACAACCAAGAATGAGGTCTCCAGCCGACCAGGTTTTGTCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS TCA 90 bp | CAGGAGGGAGAGGGGCTGAGAGGCCAGACCCTGAAGCTCCCAGCTTaGGAGCTGCAGCAGATTAGCTTTCCCTCTGTTTCTACTTTCCAA | + |
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Preference number: 5 (lower is better) Translates to: QEGEGLRGQTLKLPA*ELQQISFPSVSTFQ Trigger: TTGGAAAGTAGAAACAGAGGGAAAGCTAATCTGCTGCAGCTCTCAAGCTGGGAGCTTCAGGGTCTGGCCTCTCAGCCCCTCTCCCTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 90 bp | AGGACGGGAACGGACTTTTCTCTTGAACAAAGAGAGCAAGACCACTaGCAATATCAGAAGCAGCACCAGCAACAGTGGCAACACTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RTGTDFSLEQREQDH*QYQKQHQQQWQHCQ Trigger: CTGGCAGTGTTGCCACTGTTGCTGGTGCTGCTTCTGATATTGGCAGTGGTCTTGCTCTCTTTGTTCAAGAGAAAAGTCCGTTCCCGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CCA 72 bp | TGGCAGGCAGCCCGTATCTTGCAGCCAGGTGTCGTGTaGTACCATAAGCCGTGCTCCCGCTCGGCCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: WQAARILQPGVV*YHKPCSRSAQA Trigger: AGCCTGGGCCGAGCGGGAGCACGGCTTATGGTACCACACGACACCTGGCTGCAAGATACGGGCTGCCTGCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | GAGCCCGCAGTTTTCCGTGAACTCGTGATCAGGACATaGAGGAGGCCCAAAGCGTTGCAGGCAGCGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: EPAVFRELVIRT*RRPKALQAAAA Trigger: TGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATGTCCTGATCACGAGTTCACGGAAAACTGCGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | GGCGAAGGTAGACCAGGTGGCAGGCAGCCCGTATCTTaGAGCCAGGTGTCGTGTGGTACCATAAGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GEGRPGGRQPVS*SQVSCGTISRA Trigger: AGCACGGCTTATGGTACCACACGACACCTGGCTGCAAGATACGGGCTGCCTGCCACCTGGTCTACCTTCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CCA 72 bp | GGGTACCTGGGCAGGGCCAGTAATGTAGAGAGGTGCTaGGATCTCCAAAAGCTGAGCTGGAACCAGGACGGG | + |
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Preference number: 6 (lower is better) Translates to: GYLGRASNVERC*DLQKLSWNQDG Trigger: CCCGTCCTGGTTCCAGCTCAGCTTTTGGAGATCCCAGCACCTCTCTACATTACTGGCCCTGCCCAGGTACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 72 bp | GGCCCAAAGCGTTGCAGGCAGCGGCTGCAGCACCTCTaGTCAGAGTTCCAGTACTCAAGGTGGCCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GPKRCRQRLQHL*SEFQYSRWPQK Trigger: CTTCTGTGGCCACCTTGAGTACTGGAACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 90 bp | CATGCAGGAGGCCCAAAGCGTTGCAGGCAGCGGCTGCAGCACCTCTaGTCAGAGTTCCAGTACTCAAGGTGGCCACAGAAGCTAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: HAGGPKRCRQRLQHL*SEFQYSRWPQKLEA Trigger: AGCCTCTAGCTTCTGTGGCCACCTTGAGTACTGGAACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 90 bp | AGCACTGAGGCTGAGACAAAACCTGGTCGGCTGGAGACCTCATTCTaGGTTGTCTGCCCAAGGCTCCACCTCCCAGGTGAGCTAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: STEAETKPGRLETSF*VVCPRLHLPGELEA Trigger: TGCCTCTAGCTCACCTGGGAGGTGGAGCCTTGGGCAGACAACCAAGAATGAGGTCTCCAGCCGACCAGGTTTTGTCTCAGCCTCAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | GACATGCAGGAGGCCCAAAGCGTTGCAGGCAGCGGCTaGAGCACCTCTTGTCAGAGTTCCAGTACTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: DMQEAQSVAGSG*STSCQSSSTQG Trigger: ACCTTGAGTACTGGAACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | AAACCTGGTCGGCTGGAGACCTCATTCTTGGTTGTCTaGCCAAGGCTCCACCTCCCAGGTGAGCTAGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: KPGRLETSFLVV*PRLHLPGELEA Trigger: TGCCTCTAGCTCACCTGGGAGGTGGAGCCTTGGGCAGACAACCAAGAATGAGGTCTCCAGCCGACCAGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | CCAGGGTACCTGGGCAGGGCCAGTAATGTAGAGAGGTaGTGGGATCTCCAAAAGCTGAGCTGGAACCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PGYLGRASNVER*WDLQKLSWNQD Trigger: GTCCTGGTTCCAGCTCAGCTTTTGGAGATCCCAGCACCTCTCTACATTACTGGCCCTGCCCAGGTACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CCA 72 bp | GAGGCAGCACTGAGGCTGAGACAAAACCTGGTCGGCTaGAGACCTCATTCTTGGTTGTCTGCCCAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: EAALRLRQNLVG*RPHSWLSAQGS Trigger: GGAGCCTTGGGCAGACAACCAAGAATGAGGTCTCCAGCCGACCAGGTTTTGTCTCAGCCTCAGTGCTGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 72 bp | GAACTCGTGATCAGGACATGCAGGAGGCCCAAAGCGTaGCAGGCAGCGGCTGCAGCACCTCTTGTCAGAGTT | + |
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Preference number: 6 (lower is better) Translates to: ELVIRTCRRPKA*QAAAAAPLVRV Trigger: AACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATGTCCTGATCACGAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 90 bp | GTTTTCCGTGAACTCGTGATCAGGACATGCAGGAGGCCCAAAGCGTaGCAGGCAGCGGCTGCAGCACCTCTTGTCAGAGTTCCAGTACTC | + |
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Preference number: 6 (lower is better) Translates to: VFRELVIRTCRRPKA*QAAAAAPLVRVPVL Trigger: GAGTACTGGAACTCTGACAAGAGGTGCTGCAGCCGCTGCCTGCAACGCTTTGGGCCTCCTGCATGTCCTGATCACGAGTTCACGGAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS TCA 72 bp | CCGAAGTCATTGAGCCCGCAGTTTTCCGTGAACTCGTaGTCAGGACATGCAGGAGGCCCAAAGCGTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PKSLSPQFSVNS*SGHAGGPKRCR Trigger: CCTGCAACGCTTTGGGCCTCCTGCATGTCCTGATCACGAGTTCACGGAAAACTGCGGGCTCAATGACTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS CAA 90 bp | GAGCTAGAGGCACCTGCGTCTTCAGGTTTAAGAGGACAGACATCCTaGGGAGGGACGGGCTTTCTACACTGCTTGTGGGTTCTACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: ELEAPASSGLRGQTS*GGTGFLHCLWVLPG Trigger: CCCTGGTAGAACCCACAAGCAGTGTAGAAAGCCCGTCCCTCCCAAGGATGTCTGTCCTCTTAAACCTGAAGACGCAGGTGCCTCTAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172251.2 |
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| CDS CAA 72 bp | GCACCTGCGTCTTCAGGTTTAAGAGGACAGACATCCTaGGGAGGGACGGGCTTCTTTCTACACTGCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: APASSGLRGQTS*GGTGFFLHCLW Trigger: CCACAAGCAGTGTAGAAAGAAGCCCGTCCCTCCCAAGGATGTCTGTCCTCTTAAACCTGAAGACGCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043850.14 |
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| CDS CAA 72 bp | GCACCTGCGTCTTCAGGTTTAAGAGGACAGACATCCTaGGGAGGGACGGGCTTTCTACACTGCTTGTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: APASSGLRGQTS*GGTGFLHCLWV Trigger: AACCCACAAGCAGTGTAGAAAGCCCGTCCCTCCCAAGGATGTCTGTCCTCTTAAACCTGAAGACGCAGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172251.2 |
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| CDS CAA 90 bp | GAGCTAGAGGCACCTGCGTCTTCAGGTTTAAGAGGACAGACATCCTaGGGAGGGACGGGCTTCTTTCTACACTGCTTGTGGGTTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: ELEAPASSGLRGQTS*GGTGFFLHCLWVLP Trigger: TGGTAGAACCCACAAGCAGTGTAGAAAGAAGCCCGTCCCTCCCAAGGATGTCTGTCCTCTTAAACCTGAAGACGCAGGTGCCTCTAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043850.14 |
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| CDS CAA 72 bp | GCTGAGCTGGAACCAGGACGGGAACGGACTTTTCTCTaGAACAAAGAGAGCAAGACCACTGCCAATATCAGA | + |
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Preference number: 6 (lower is better) Translates to: AELEPGRERTFL*NKESKTTANIR Trigger: TCTGATATTGGCAGTGGTCTTGCTCTCTTTGTTCAAGAGAAAAGTCCGTTCCCGTCCTGGTTCCAGCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | GTTGCAATACCCAGGGGAACACTTTTTGAAAGGATGTaGTACAGTATCGCCGAAGTCATTGAGCCCGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VAIPRGTLFERM*YSIAEVIEPAV Trigger: AACTGCGGGCTCAATGACTTCGGCGATACTGTAGCACATCCTTTCAAAAAGTGTTCCCCTGGGTATTGCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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| CDS GCA 72 bp | ACGGACTTTTCTCTTGAACAAAGAGAGCAAGACCACTaGCAATATCAGAAGCAGCACCAGCAACAGTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: TDFSLEQREQDH*QYQKQHQQQWQ Trigger: TTGCCACTGTTGCTGGTGCTGCTTCTGATATTGGCAGTGGTCTTGCTCTCTTTGTTCAAGAGAAAAGTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043850.14 ENSMUST00000172251.2 |
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