Pregenerated sensors for IGFL3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066756

Ensembl transcript IDs: ENSMUST00000152973.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR CCA 90 bp	GAGCATTGTAATGAGACACATATATCACTGCACCCCAATGCTTCAGGTATCCATAGAACATTCAGGAACTaGTGCTTGCAGGAAGAAAGC	+
Preference number: 2 (lower is better) Translates to: EHCNETHISLHPNASGIHRTFRN*CLQEES Trigger: GCTTTCTTCCTGCAAGCACCAGTTCCTGAATGTTCT...ATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
3UTR-3UTR GCA 90 bp	AGCATTGTAATGAGACACATATATCACTGCACCCCAATGCTTCAGGTATCCATTACATTCAGGAACTGGTaGTTGCAGGAAGAAAGCAGA	+
Preference number: 2 (lower is better) Translates to: SIVMRHIYHCTPMLQVSITFRNW*LQEESR Trigger: TCTGCTTTCTTCCTGCAAGCACCAGTTCCTGAATGT...AATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
3UTR GCA 72 bp	ATCCAAAGGAGCATTGTAATGAGACACATATATCACTaGACCCCAATGCTTCAGGTATCCATTCTTCAAGTA	+
Preference number: 3 (lower is better) Translates to: IQRSIVMRHIYH*TPMLQVSILQV Trigger: TACTTGAAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAATGCTCCTTTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR TCA 90 bp	GGTATCCATTCTTCAAGTAAGAACATTCAGGAACTGGTGCTTGCAGGAAGAAAGGGCAGGATGGTGTCATaGACACAACACTCCTCTGAG	+
Preference number: 4 (lower is better) Translates to: GIHSSSKNIQELVLAGRKGRMVS*TQHSSE Trigger: CTCAGAGGAGTGTTGTGTTCATGACACCATCCTGCC...CTTTCTTCCTGCAAGCACCAGTTCCTGAATGTTCTTACTTGAAGAATGGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR TCA 90 bp	ATTGTAATGAGACACATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTAACACAACACTCCTCTaGGGGGTTGTAAGTTCTGCC	+
Preference number: 4 (lower is better) Translates to: IVMRHIYHCTPMLQVSILNTTLL*GVVSSA Trigger: GGCAGAACTTACAACCCCTCAGAGGAGTGTTGTGTT...AAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR GCA 90 bp	CATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTCAAGTAAGAACATTAGGGGTTGTAAGTTCTaGCATCACACTTGGGATTGC	+
Preference number: 4 (lower is better) Translates to: HISLHPNASGIHSSSKNIRGCKF*HHTWDC Trigger: GCAATCCCAAGTGTGATGGCAGAACTTACAACCCCT...AATGTTCTTACTTGAAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR TCA 90 bp	GGTATCCATTCTTCAAGTAAGAACATTCAGGAACTGGTGCTTGCAGGAAGAAAGTGGGATCTCTCTCCATaGACTTTAAGCTTGACAATA	+
Preference number: 4 (lower is better) Translates to: GIHSSSKNIQELVLAGRKWDLSP*TLSLTI Trigger: TATTGTCAAGCTTAAAGTTCATGGAGAGAGATCCCA...CTTTCTTCCTGCAAGCACCAGTTCCTGAATGTTCTTACTTGAAGAATGGATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR GCA 90 bp	ATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTCAAGTAAGAACATTCCATGAAAAATCTTGTTaGTTTTACAGTTCCTGGAGA	+
Preference number: 4 (lower is better) Translates to: IYHCTPMLQVSILQVRTFHEKSC*FYSSWR Trigger: TCTCCAGGAACTGTAAAAGCAACAAGATTTTTCATG...GAATGTTCTTACTTGAAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS GCA 90 bp	GGATGGTGTCATGAACACAACACTCCTCTGAGGGGTTGTAAGTTCTaGCATCACACTTGGGATTGCACGGCCATGAGCCAGGGCCTGAGA	+
Preference number: 5 (lower is better) Translates to: GWCHEHNTPLRGCKF*HHTWDCTAMSQGLR Trigger: TCTCAGGCCCTGGCTCATGGCCGTGCAATCCCAAGTGTGATGGCAGAACTTACAACCCCTCAGAGGAGTGTTGTGTTCATGACACCATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR CAA 90 bp	ATTGTAATGAGACACATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTCCATCACACTTGGGATaGCACGGCCATGAGCCAGGG	+
Preference number: 5 (lower is better) Translates to: IVMRHIYHCTPMLQVSILPSHLG*HGHEPG Trigger: CCCTGGCTCATGGCCGTGCAATCCCAAGTGTGATGG...AAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR CAA 90 bp	ATTGTAATGAGACACATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTCAGGGCCTGAGAAAGTaGAAATTTTTCGAGCTCCTG	+
Preference number: 5 (lower is better) Translates to: IVMRHIYHCTPMLQVSILQGLRK*KFFELL Trigger: CAGGAGCTCGAAAAATTTCAACTTTCTCAGGCCCTG...AAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGTCTCATTACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS-3UTR CAA 90 bp	ACACATATATCACTGCACCCCAATGCTTCAGGTATCCATTCTTCAAGTAAGAACCTAAGAGAAAGTTGGTaGTCTTCAATATCTTCTCCA	+
Preference number: 5 (lower is better) Translates to: THISLHPNASGIHSSSKNLRESW*SSISSP Trigger: TGGAGAAGATATTGAAGACAACCAACTTTCTCTTAG...GTTCTTACTTGAAGAATGGATACCTGAAGCATTGGGGTGCAGTGATATATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS GCA 72 bp	CTGAGGGGTTGTAAGTTCTGCCATCACACTTGGGATTaGACGGCCATGAGCCAGGGCCTGAGAAAGTTGAAA	+
Preference number: 6 (lower is better) Translates to: LRGCKFCHHTWD*TAMSQGLRKLK Trigger: TTTCAACTTTCTCAGGCCCTGGCTCATGGCCGTGCAATCCCAAGTGTGATGGCAGAACTTACAACCCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS GCA 72 bp	CATGAACACAACACTCCTCTGAGGGGTTGTAAGTTCTaGCATCACACTTGGGATTGCACGGCCATGAGCCAG	+
Preference number: 6 (lower is better) Translates to: HEHNTPLRGCKF*HHTWDCTAMSQ Trigger: CTGGCTCATGGCCGTGCAATCCCAAGTGTGATGGCAGAACTTACAACCCCTCAGAGGAGTGTTGTGTTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS TCA 72 bp	AAAGGGCAGGATGGTGTCATGAACACAACACTCCTCTaGGGGGTTGTAAGTTCTGCCATCACACTTGGGATT	+
Preference number: 6 (lower is better) Translates to: KGQDGVMNTTLL*GVVSSAITLGI Trigger: AATCCCAAGTGTGATGGCAGAACTTACAACCCCTCAGAGGAGTGTTGTGTTCATGACACCATCCTGCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS TCA 72 bp	GAGATAGGGGATGAACTGCAATGGGATCTCTCTCCATaGACTTTAAGCTTGACAATAAATTTCTTCTTGGGG	+
Preference number: 6 (lower is better) Translates to: EIGDELQWDLSP*TLSLTINFFLG Trigger: CCCCAAGAAGAAATTTATTGTCAAGCTTAAAGTTCATGGAGAGAGATCCCATTGCAGTTCATCCCCTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152973.2
CDS TCA 72 bp	AATCTTGTTGCTTTTACAGTTCCTGGAGATAGGGGATaGACTGCAATGGGATCTCTCTCCATGAACTTTAAG	+
Preference number: 6 (lower is better) Translates to: NLVAFTVPGDRG*TAMGSLSMNFK Trigger: CTTAAAGTTCATGGAGAGAGATCCCATTGCAGTTCATCCCCTATCTCCAGGAACTGTAAAAGCAACAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152973.2