Pregenerated sensors for IGFBPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035551Ensembl transcript IDs: ENSMUST00000044297.7
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATTCTGGGTCAAGGGAGGCAGGGAGGCAGCTCTCAGTTCTGTCCTaGTCTAAGGCCTTCACACGGGCAGGGCACCTCCTCCCTGAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: HSGSREAGRQLSVLS*SKAFTRAGHLLPEP Trigger: AGGCTCAGGGAGGAGGTGCCCTGCCCGTGTGAAGGCCTTAGAGCAGGACAGAACTGAGAGCTGCCTCCCTGCCTCCCTTGACCCAGAATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CCA 90 bp | CCAGGTGGGGGTGGAACATCTCCTCTCCCTAGTTCAGGGTCATTCTaGGTCAAGGGAGGCAGGGAGGCAGCTCTCAGTTCTGTCCTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: PGGGGTSPLPSSGSF*VKGGREAALSSVLL Trigger: GAGCAGGACAGAACTGAGAGCTGCCTCCCTGCCTCCCTTGACCCAGAATGACCCTGAACTAGGGAGAGGAGATGTTCCACCCCCACCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 90 bp | TCCTCCCTGAGCCTGCTCAGTGGAGACTGGGAAGGCAAAAATCCCTaGTCTTCCAGCCATGGCTGGGCTGATGGATGGGACAGTGCCTCG | + |
|
Preference number: 1 (lower is better) Translates to: SSLSLLSGDWEGKNP*SSSHGWADGWDSAS Trigger: CGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCTGGAAGATCAGGGATTTTTGCCTTCCCAGTCTCCACTGAGCAGGCTCAGGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 90 bp | ACACAGAGGCCCACAAGGGAAGGGGACTTGCCCAGGGTCATACAGTaGATATGCCCCTGGGCACTGAGTTCCAGATTCTCAGGCTTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: TQRPTREGDLPRVIQ*ICPWALSSRFSGLS Trigger: AGACAAGCCTGAGAATCTGGAACTCAGTGCCCAGGGGCATATTCACTGTATGACCCTGGGCAAGTCCCCTTCCCTTGTGGGCCTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 90 bp | AGACTGGGAAGGCAAAAATCCCTGATCTTCCAGCCATGGCTGGGCTaGTGGATGGGACAGTGCCTCGTGAACTTTCAGGTCTGGTCACAC | + |
|
Preference number: 1 (lower is better) Translates to: RLGRQKSLIFQPWLG*WMGQCLVNFQVWSH Trigger: GTGTGACCAGACCTGAAAGTTCACGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCTGGAAGATCAGGGATTTTTGCCTTCCCAGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CCA 90 bp | GGTGTCCTGTCTCCAGTAAAGGTCAGGTGTCTCCTGTTTATCTGTTaGGAGAGTGCTAGGTTAGCAGGTGCACAGCTGGCCAATGGGTCC | + |
|
Preference number: 1 (lower is better) Translates to: GVLSPVKVRCLLFIC*ESARLAGAQLANGS Trigger: GGACCCATTGGCCAGCTGTGCACCTGCTAACCTAGCACTCTCCCAACAGATAAACAGGAGACACCTGACCTTTACTGGAGACAGGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR GCA 90 bp | TTCTCCTGTTTAACTTTCCCCATTAAGGCAGGGAGGACAGCCTTCTaGCCGGGTAAGAACAAATGCACCGTGCTGCAGTGTGATTCCACC | + |
|
Preference number: 1 (lower is better) Translates to: FSCLTFPIKAGRTAF*PGKNKCTVLQCDST Trigger: GGTGGAATCACACTGCAGCACGGTGCATTTGTTCTTACCCGGGCAGAAGGCTGTCCTCCCTGCCTTAATGGGGAAAGTTAAACAGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR GCA 90 bp | CCCACTAAGCAGTTACAGACACCAAGTCACGAGTCAGCTGGCCTGTaGCTTGTTTTGAGCCCTTTAGAATTACAAACAGACAGTGTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PTKQLQTPSHESAGL*LVLSPLELQTDSVW Trigger: CCACACACTGTCTGTTTGTAATTCTAAAGGGCTCAAAACAAGGCACAGGCCAGCTGACTCGTGACTTGGTGTCTGTAACTGCTTAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 90 bp | ATTTCAGACTCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTaGGTGAGAACTCCAATACACAATGGCAGCCATGAGCAGCAACTG | + |
|
Preference number: 1 (lower is better) Translates to: ISDSDLLGLKEESSV*VRTPIHNGSHEQQL Trigger: CAGTTGCTGCTCATGGCTGCCATTGTGTATTGGAGTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGAGTCTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR GCA 90 bp | GTTCAGGGTCATTCTGGGTCAAGGGAGGCAGGGAGGCAGCTCTCAGTTCTGTCCGAGTCAGCTGGCCTGTaGCTTGTTTTGAGCCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VQGHSGSREAGRQLSVLSESAGL*LVLSPL Trigger: TAAAGGGCTCAAAACAAGGCACAGGCCAGCTGACTC...GGACAGAACTGAGAGCTGCCTCCCTGCCTCCCTTGACCCAGAATGACCCTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR TCA 90 bp | GGGAAGGCAAAAATCCCTGATCTTCCAGCCATGGCTGGGCTGATGGATGGGACAATCATCATCGTCTTGTaGCAAGTGTCTCTGGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GKAKIPDLPAMAGLMDGTIIIVL*QVSLEA Trigger: GGCTTCCAGAGACACTTGTCACAAGACGATGATGAT...TGTCCCATCCATCAGCCCAGCCATGGCTGGAAGATCAGGGATTTTTGCCTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CCA 90 bp | GGGAAGGCAAAAATCCCTGATCTTCCAGCCATGGCTGGGCTGATGGATGGGACATTAATCCCAGCACTTTaGGAACAGAGGCAGGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GKAKIPDLPAMAGLMDGTLIPAL*EQRQVV Trigger: AACTACCTGCCTCTGTTCCCAAAGTGCTGGGATTAA...TGTCCCATCCATCAGCCCAGCCATGGCTGGAAGATCAGGGATTTTTGCCTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGCATCCGGGCAGTTCTGTGAGCCAGACCCAATTACGTGTTGTTGTTGTTTCACCCTTGGTGGGTTaGGCTACAGAGAAGGAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLHPGSSVSQTQLRVVVVSPLVG*ATEKEK Trigger: TTTTTCCTTCTCTGTAGCCCAACCCACCAAGGGTGA...AACAACAACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR GCA 90 bp | GGGAAGGCAAAAATCCCTGATCTTCCAGCCATGGCTGGGCTGATGGATGGGACACACCTGAGCTGTTCATaGAAGGTGATGTTTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GKAKIPDLPAMAGLMDGTHLSCS*KVMFLK Trigger: TTTTAAAAACATCACCTTGCATGAACAGCTCAGGTG...TGTCCCATCCATCAGCCCAGCCATGGCTGGAAGATCAGGGATTTTTGCCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CAA 90 bp | CCATTTCTGATTTTATACACAGAGAAAGGCTTTCAACATATTTACTaGAGGACACAGAGGCCCACAAGGGAAGGGGACTTGCCCAGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PFLILYTEKGFQHIY*RTQRPTREGDLPRV Trigger: GACCCTGGGCAAGTCCCCTTCCCTTGTGGGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAATCAGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR TCA 90 bp | GATTTTATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCACACAATGGCAGCCATaGGCAGCAACTGGGACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: DFIHRERLSTYLLEDTEATQWQP*AATGTR Trigger: TCTGGTCCCAGTTGCTGCTCATGGCTGCCATTGTGT...GGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CCA 90 bp | GATTTTATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCCCTGAGCCTGCTCAGTaGAGACTGGGAAGGCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: DFIHRERLSTYLLEDTEAPEPAQ*RLGRQK Trigger: TTTTTGCCTTCCCAGTCTCCACTGAGCAGGCTCAGG...GGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR GCA 72 bp | TCAAGGGAGGCAGGGAGGCAGCTCTCAGTTCTGTCCTaGTCTAAGGCCTTCACACGGGCAGGGCACCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SREAGRQLSVLS*SKAFTRAGHLL Trigger: GAGGAGGTGCCCTGCCCGTGTGAAGGCCTTAGAGCAGGACAGAACTGAGAGCTGCCTCCCTGCCTCCCTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR GCA 72 bp | GCAGGGAGGACAGCCTTCTGCCCGGGTAAGAACAAATaGACCGTGCTGCAGTGTGATTCCACCACCTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGRTAFCPGKNK*TVLQCDSTTYG Trigger: TCCGTAGGTGGTGGAATCACACTGCAGCACGGTGCATTTGTTCTTACCCGGGCAGAAGGCTGTCCTCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCATGGCTGGGCTGATGGATGGGACAGTGCCTCGTGAACTTTCAGGTCTGCTCACCCTTGGTGGGTaGGGCTACAGAGAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PAMAGLMDGTVPRELSGLLTLGG*GYREGK Trigger: TTTTCCTTCTCTGTAGCCCAACCCACCAAGGGTGAG...CAGACCTGAAAGTTCACGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | AGCCATGGCTGGGCTGATGGATGGGACAGTGCCTCGTaGACTTTCAGGTCTGGTCACACTGAGGGACTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SHGWADGWDSAS*TFRSGHTEGLQ Trigger: TTGGAGTCCCTCAGTGTGACCAGACCTGAAAGTTCACGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CCA 72 bp | CACTCTAGGAGGGCCATCTGGCCATCTCACCCTTGGTaGGTTGGGCTACAGAGAAGGAAAAACACCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: HSRRAIWPSHPW*VGLQRRKNTHP Trigger: GGGATGGGTGTTTTTCCTTCTCTGTAGCCCAACCCACCAAGGGTGAGATGGCCAGATGGCCCTCCTAGAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTGCATCCGGGCAGTTCTGTGAGCCAGACCCAATTACGTGTTGTTGTTGTTCTGGCCATCTCACCCTaGGTGGGTTGGGCTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LLHPGSSVSQTQLRVVVVLAISP*VGWATE Trigger: CTCTGTAGCCCAACCCACCAAGGGTGAGATGGCCAG...AACAACAACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | TGCCCAGGGTCATACAGTGAATATGCCCCTGGGCACTaGGTTCCAGATTCTCAGGCTTGTCTCCCTCAGCGT | + |
|
Preference number: 3 (lower is better) Translates to: CPGSYSEYAPGH*VPDSQACLPQR Trigger: ACGCTGAGGGAGACAAGCCTGAGAATCTGGAACTCAGTGCCCAGGGGCATATTCACTGTATGACCCTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | CCCACAAGGGAAGGGGACTTGCCCAGGGTCATACAGTaGATATGCCCCTGGGCACTGAGTTCCAGATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTREGDLPRVIQ*ICPWALSSRFS Trigger: TGAGAATCTGGAACTCAGTGCCCAGGGGCATATTCACTGTATGACCCTGGGCAAGTCCCCTTCCCTTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | ACTTCCACTGGGGCCTCCTGCATCCGGGCAGTTCTGTaGGCCAGACCCAATTACGTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TSTGASCIRAVL*ARPNYVLLLLL Trigger: CAACAACAACAACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAGGCCCCAGTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CCA 72 bp | TCTCACTCTAGGAGGGCCATCTGGCCATCTCACCCTTaGTGGGTTGGGCTACAGAGAAGGAAAAACACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: SHSRRAIWPSHP*WVGLQRRKNTH Trigger: ATGGGTGTTTTTCCTTCTCTGTAGCCCAACCCACCAAGGGTGAGATGGCCAGATGGCCCTCCTAGAGTGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CCA 72 bp | TCTCCAGTAAAGGTCAGGTGTCTCCTGTTTATCTGTTaGGAGAGTGCTAGGTTAGCAGGTGCACAGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SPVKVRCLLFIC*ESARLAGAQLA Trigger: GGCCAGCTGTGCACCTGCTAACCTAGCACTCTCCCAACAGATAAACAGGAGACACCTGACCTTTACTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | TTATCCTGTGAGCTGAGGTCAGCTGGGTCTATAGAGTaGGTTCCAGGGCAGCCAGGGATATACAGTGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: LSCELRSAGSIE*VPGQPGIYSET Trigger: GGTTTCACTGTATATCCCTGGCTGCCCTGGAACTCACTCTATAGACCCAGCTGACCTCAGCTCACAGGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | TTTTATACACAGAGAAAGGCTTTCAACATATTTACTTaGGGACACAGAGGCCCACAAGGGAAGGGGACTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FYTQRKAFNIFT*GHRGPQGKGTC Trigger: GCAAGTCCCCTTCCCTTGTGGGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACTCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTGAGTGAGAACTTTAATCCCAGCACTTaGGGAACAGAGGCAGGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: FRLRSARVKGRKFSLSENFNPST*GTEAGS Trigger: ACTACCTGCCTCTGTTCCCAAAGTGCTGGGATTAAA...GTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGAGTCTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR TCA 72 bp | TCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTaGGTGAGAACTCCAATACACAATGGCAGCCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SDLLGLKEESSV*VRTPIHNGSHE Trigger: CTCATGGCTGCCATTGTGTATTGGAGTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR GCA 90 bp | CCTGCTCTAAGGCCTTCACACGGGCAGGGCACCTCCTCCCTGAGCCTGCTCAGTTCCAATGGCGTTGGCTaGGTGGCAGTGGTACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PALRPSHGQGTSSLSLLSSNGVG*VAVVHS Trigger: GGAGTGTACCACTGCCACGCAGCCAACGCCATTGGA...ACTGAGCAGGCTCAGGGAGGAGGTGCCCTGCCCGTGTGAAGGCCTTAGAGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCCATGGCTGGGCTGATGGATGGGACAGTGCCTCGTGAACTTTCAGGTCTGTTGTGCAGGTGGCCATaGTGCGCGCGGGGTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PAMAGLMDGTVPRELSGLLCRWP*CARGAC Trigger: ACATGCACCCCGCGCGCACCATGGCCACCTGCACAA...CAGACCTGAAAGTTCACGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGTGCCTTGTTTTGAGCCCTTTAGAATTACAAACAGACAGTGTGTGGCCGCCAGGGCCACAGCGTaGGCCCACGGGTCCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPVPCFEPFRITNRQCVAARATA*AHGSPA Trigger: TGCGGGGGACCCGTGGGCTCACGCTGTGGCCCTGGC...GGCCACACACTGTCTGTTTGTAATTCTAAAGGGCTCAAAACAAGGCACAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | CCTGCTCTAAGGCCTTCACACGGGCAGGGCACCTCCTCCCTGAGCCTGCTCAGTGAGGTCACCCGGAACTaGGGAGTAGAGGCTTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PALRPSHGQGTSSLSLLSEVTRN*GVEAFV Trigger: TACAAAAGCCTCTACTCCTCAGTTCCGGGTGACCTC...ACTGAGCAGGCTCAGGGAGGAGGTGCCCTGCCCGTGTGAAGGCCTTAGAGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCATCCGGGCAGTTCTGTGAGCCAGACCCAATTACGTGTTGTTGTTGTTCAGACGGCGCCGCGTTaGGCGCACACGCAAAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGSSVSQTQLRVVVVQTAPR*AHTQSP Trigger: CGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTG...AACAACAACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | TACAGAGAAGGAAAAACACCCATCCCAGTCTCCAAGGATAGGGGTACAGGGACCGGAGATCCAGGGCGCTaGGCAAGGCGAGGGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YREGKTPIPVSKDRGTGTGDPGR*ARRGRR Trigger: CCTGCGCCCTCGCCTTGCCCAGCGCCCTGGATCTCC...GGTCCCTGTACCCCTATCCTTGGAGACTGGGATGGGTGTTTTTCCTTCTCTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCATCCGGGCAGTTCTGTGAGCCAGACCCAATTACGTGTTGTTGTTGTTCCATCGCGAGCCTTGTaGAGGTGGCCATGGTGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLHPGSSVSQTQLRVVVVPSRAL*RWPWCA Trigger: CGCGCACCATGGCCACCTGCACAAGGCTCGCGATGG...AACAACAACAACACGTAATTGGGTCTGGCTCACAGAACTGCCCGGATGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | TACAGAGAAGGAAAAACACCCATCCCAGTCTCCAAGGATAGGGGTACAGGGACCACCGTGCCGTGGGACTaGGCCTCTCCAATGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YREGKTPIPVSKDRGTGTTVPWD*ASPMAL Trigger: CAACGCCATTGGAGAGGCTCAGTCCCACGGCACGGT...GGTCCCTGTACCCCTATCCTTGGAGACTGGGATGGGTGTTTTTCCTTCTCTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CAA 72 bp | CTAGGAGGGCCATCTGGCCATCTCACCCTTGGTGGGTaGGGCTACAGAGAAGGAAAAACACCCATCCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGGPSGHLTLGG*GYREGKTPIPV Trigger: GACTGGGATGGGTGTTTTTCCTTCTCTGTAGCCCAACCCACCAAGGGTGAGATGGCCAGATGGCCCTCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | CCAGCCATGGCTGGGCTGATGGATGGGACAGTGCCTCGTGAACTTTCAGGTCTGACAGCTATATTGACATaGTCTCCGGGCAACTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PAMAGLMDGTVPRELSGLTAILT*SPGNSS Trigger: GGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGT...CAGACCTGAAAGTTCACGAGGCACTGTCCCATCCATCAGCCCAGCCATGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR GCA 90 bp | TACAGAGAAGGAAAAACACCCATCCCAGTCTCCAAGGATAGGGGTACAGGGACCGTGCCCTCTGGAGAGTaGTTGACCTTCTTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YREGKTPIPVSKDRGTGTVPSGE*LTFFQV Trigger: CACCTGGAAGAAGGTCAAGCACTCTCCAGAGGGCAC...GGTCCCTGTACCCCTATCCTTGGAGACTGGGATGGGTGTTTTTCCTTCTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | AAAGCGGGGAGAGGGCAGGAACCTGCTTTTCAGAAAGCTGATATTCTCCTGTTTCAGGATGTGGTCTCATaGTCAGAAGGGCCCCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGRGQEPAFQKADILLFQDVVS*SEGPPR Trigger: GCGAGGGGGCCCTTCTGACCATGAGACCACATCCTG...AAACAGGAGAATATCAGCTTTCTGAAAAGCAGGTTCCTGCCCTCTCCCCGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | TTCAGACTCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTGAGTGAGAACGAGACCCCGGGCCAGTaGTGGCAGGAGCAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FRLRSARVKGRKFSLSENETPGQ*WQEQEQ Trigger: CTGCTCCTGCTCCTGCCATCACTGGCCCGGGGTCTC...GTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGAGTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | GATTTTATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCCGAGCCTTGTGCAGGTaGCCATGGTGCGCGCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DFIHRERLSTYLLEDTEARALCR*PWCARG Trigger: ACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCG...GGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | AAAGCGGGGAGAGGGCAGGAACCTGCTTTTCAGAAAGCTGATATTCTCCTGTTTGTCCCAGTGACATTGTaGATATCTCGAGGGGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KAGRGQEPAFQKADILLFVPVTL*ISRGGM Trigger: CATGCCCCCTCGAGATATTCACAATGTCACTGGGAC...AAACAGGAGAATATCAGCTTTCTGAAAAGCAGGTTCCTGCCCTCTCCCCGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| 3UTR CAA 72 bp | ACACCAAGTCACGAGTCAGCTGGCCTGTGCCTTGTTTaGAGCCCTTTAGAATTACAAACAGACAGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPSHESAGLCLV*SPLELQTDSVW Trigger: CCACACACTGTCTGTTTGTAATTCTAAAGGGCTCAAAACAAGGCACAGGCCAGCTGACTCGTGACTTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | TTCAGACTCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTGAGTGAGAACGGGCCCCCTCGCACCTaGACAGCTATATTGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: FRLRSARVKGRKFSLSENGPPRT*TAILTW Trigger: CCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCC...GTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGAGTCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | ATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCCACAAGCCTGGACAGCTATATTaGCATGGTCTCCGGGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: IHRERLSTYLLEDTEAHKPGQLY*HGLRAT Trigger: AGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGG...CTTGTGGGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | ATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCCACAAGCCTTCCTCAGAGGGTTaGTCAAAATCCAGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IHRERLSTYLLEDTEAHKPSSEG*SKSRMW Trigger: CCACATCCTGGATTTTGATCAACCCTCTGAGGAAGG...CTTGTGGGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR TCA 90 bp | ATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCCACAAGATACTTGAGTCCCAGTaGCATTGTGAATATCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHRERLSTYLLEDTEAHKILESQ*HCEYLE Trigger: CTCGAGATATTCACAATGTCACTGGGACTCAAGTAT...CTTGTGGGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CCA 90 bp | AATTTCACAGAGCAAAATGATCCATTCCTTGATCATCATCGTCTTGTGACAAGTTCAAAATCCAGGATGTaGTCTCATGGTCAGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFTEQNDPFLDHHRLVTSSKSRM*SHGQKG Trigger: GCCCTTCTGACCATGAGACCACATCCTGGATTTTGA...ACTTGTCACAAGACGATGATGATCAAGGAATGGATCATTTTGCTCTGTGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 90 bp | CGTCCCCGAGGCGCGACTCGCACACACCAGGCCAGGGCCACAGCGTaGGCCCACGGGTCCCCCGCAACTCGCGCCCTCGGCGCCCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPRGATRTHQARATA*AHGSPATRALGAQA Trigger: TGCCTGGGCGCCGAGGGCGCGAGTTGCGGGGGACCCGTGGGCTCACGCTGTGGCCCTGGCCTGGTGTGTGCGAGTCGCGCCTCGGGGACG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 90 bp | CAGAGCCGCAGACGGCGCCGCGTTGCGCGCACACGCAAAGCCCGGTaGCCTCGGGCGCCGTCCCCGAGGCGCGACTCGCACACACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QSRRRRRVARTRKAR*PRAPSPRRDSHTPG Trigger: GCCTGGTGTGTGCGAGTCGCGCCTCGGGGACGGCGCCCGAGGGCACCGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTGCGGCTCTG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | GCGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGCGCGCAGATGCTaGAGTAGGAGCGGCCGTCAGAGCCGCAGACGGCGCCGCGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARGVHVGRADVARRC*SRSGRQSRRRRRVA Trigger: CGCAACGCGGCGCCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCATCTGCGCGCTACGTCTGCGCGCCCGACATGCACCCCGCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 90 bp | GGTGCGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGCGCGCAGATaGTGGAGTAGGAGCGGCCGTCAGAGCCGCAGACGGCGCCGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GARGVHVGRADVARR*WSRSGRQSRRRRRV Trigger: AACGCGGCGCCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCATCTGCGCGCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | GGAGCGAACTCGCAGGGCCCATCGCGAGCCTTGTGCAGGTGGCCATaGTGCGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GANSQGPSRALCRWP*CARGACRARRRSAQ Trigger: CTGCGCGCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 90 bp | GCGAACTCGCAGGGCCCATCGCGAGCCTTGTGCAGGTGGCCATGGTaGGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGCGCGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ANSQGPSRALCRWPW*ARGACRARRRSAQM Trigger: CATCTGCGCGCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | ACCACGGGAGCGAACTCGCAGGGCCCATCGCGAGCCTTGTGCAGGTaGCCATGGTGCGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTGANSQGPSRALCR*PWCARGACRARRRS Trigger: GCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGCTCCCGTGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 90 bp | ATGAGGACCACGGGAGCGAACTCGCAGGGCCCATCGCGAGCCTTGTaGAGGTGGCCATGGTGCGCGCGGGGTGCATGTCGGGCGCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MRTTGANSQGPSRAL*RWPWCARGACRARR Trigger: TCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGCTCCCGTGGTCCTCAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 90 bp | TGGTCTCATGGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATTaGCATGGTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSHGQKGPLAPGQLY*HGLRATPPTPRCPL Trigger: CAGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 90 bp | GACCGTCACCGTGCCGTGGGACTGAGCCTCTCCAATGGCGTTGGCTaGGTGGCAGTGGTACACTCCCTCATCTTCCTTCCTCAGAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DRHRAVGLSLSNGVG*VAVVHSLIFLPQRV Trigger: AACCCTCTGAGGAAGGAAGATGAGGGAGTGTACCACTGCCACGCAGCCAACGCCATTGGAGAGGCTCAGTCCCACGGCACGGTGACGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | ATTGACATGGTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCCTCTaGAGAGTGCTTGACCTTCTTCCAGGTGATGACCGGGGTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IDMVSGQLLQPLGAL*RVLDLLPGDDRGGH Trigger: GTGCCCACCCCGGTCATCACCTGGAAGAAGGTCAAGCACTCTCCAGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | TCATGGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATTGACATaGTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCCTCTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SWSEGPPRTWTAILT*SPGNSSNPSVPSGE Trigger: CTCTCCAGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | AAAATCCAGGATGTGGTCTCATGGTCAGAAGGGCCCCCTCGCACCTaGACAGCTATATTGACATGGTCTCCGGGCAACTCCTCCAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KIQDVVSWSEGPPRT*TAILTWSPGNSSNP Trigger: GGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCACATCCTGGATTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 90 bp | CTGCGTGGCAGTGGTACACTCCCTCATCTTCCTTCCTCAGAGGGTTaGTCAAAATCCAGGATGTGGTCTCATGGTCAGAAGGGCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRGSGTLPHLPSSEG*SKSRMWSHGQKGPL Trigger: GAGGGGGCCCTTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAGGAAGGAAGATGAGGGAGTGTACCACTGCCACGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CAA 90 bp | GATTTTATACACAGAGAAAGGCTTTCAACATATTTACTTGAGGACACAGAGGCCGCAGACGGCGCCGCGTaGCGCGCACACGCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DFIHRERLSTYLLEDTEAADGAA*RAHAKP Trigger: GGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTGC...GGCCTCTGTGTCCTCAAGTAAATATGTTGAAAGCCTTTCTCTGTGTATAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 90 bp | TCTTCCTTCCTCAGAGGGTTGATCAAAATCCAGGATGTGGTCTCATaGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATTGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFLRGLIKIQDVVS*SEGPPRTWTAILTW Trigger: CCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAGGAAGGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CAA 90 bp | AGAAAGCTGATATTCTCCTGTTTAACTTTCCCCATTAAGGCAGGGAGGACAGCCCCCTCTGGAGAGTGCTaGACCTTCTTCCAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKLIFSCLTFPIKAGRTAPSGEC*TFFQVM Trigger: CATCACCTGGAAGAAGGTCAAGCACTCTCCAGAGGG...GGCTGTCCTCCCTGCCTTAATGGGGAAAGTTAAACAGGAGAATATCAGCTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CAA 90 bp | AAAGCGGGGAGAGGGCAGGAACCTGCTTTTCAGAAAGCTGATATTCTCCTGTTTACCTGGACAGCTATATaGACATGGTCTCCGGGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KAGRGQEPAFQKADILLFTWTAI*TWSPGN Trigger: GTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGT...AAACAGGAGAATATCAGCTTTCTGAAAAGCAGGTTCCTGCCCTCTCCCCGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS-3UTR CAA 90 bp | TTCAGACTCAGATCTGCTAGGGTTAAAGGAAGAAAGTTCAGTTTGAGTGAGAACTCCTTCCTCAGAGGGTaGATCAAAATCCAGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRLRSARVKGRKFSLSENSFLRG*IKIQDV Trigger: CACATCCTGGATTTTGATCAACCCTCTGAGGAAGGA...GTTCTCACTCAAACTGAACTTTCTTCCTTTAACCCTAGCAGATCTGAGTCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 72 bp | AGACGGCGCCGCGTTGCGCGCACACGCAAAGCCCGGTaGCCTCGGGCGCCGTCCCCGAGGCGCGACTCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RRRRVARTRKAR*PRAPSPRRDSH Trigger: GTGCGAGTCGCGCCTCGGGGACGGCGCCCGAGGGCACCGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 72 bp | GGCGCGACTCGCACACACCAGGCCAGGGCCACAGCGTaGGCCCACGGGTCCCCCGCAACTCGCGCCCTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GATRTHQARATA*AHGSPATRALG Trigger: GCCGAGGGCGCGAGTTGCGGGGGACCCGTGGGCTCACGCTGTGGCCCTGGCCTGGTGTGTGCGAGTCGCGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 72 bp | GTAGGAGCGGCCGTCAGAGCCGCAGACGGCGCCGCGTaGCGCGCACACGCAAAGCCCGGTGCCCTCGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VGAAVRAADGAA*RAHAKPGALGR Trigger: GCGCCCGAGGGCACCGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTGCGGCTCTGACGGCCGCTCCTAC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 90 bp | GATGCTGGAGTAGGAGCGGCCGTCAGAGCCGCAGACGGCGCCGCGTaGCGCGCACACGCAAAGCCCGGTGCCCTCGGGCGCCGTCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: DAGVGAAVRAADGAA*RAHAKPGALGRRPR Trigger: TCGGGGACGGCGCCCGAGGGCACCGGGCTTTGCGTGTGCGCGCAACGCGGCGCCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCATC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 72 bp | TCTACCCGCGTCGCGGAGCCCGAGACCCCGGGCCAGTaGTGGCAGGAGCAGGAGCAGCAGCGGCAGACGCGG | + |
|
Preference number: 6 (lower is better) Translates to: STRVAEPETPGQ*WQEQEQQRQTR Trigger: CCGCGTCTGCCGCTGCTGCTCCTGCTCCTGCCATCACTGGCCCGGGGTCTCGGGCTCCGCGACGCGGGTAGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | GCGAACTCGCAGGGCCCATCGCGAGCCTTGTGCAGGTaGCCATGGTGCGCGCGGGGTGCATGTCGGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ANSQGPSRALCR*PWCARGACRAR Trigger: GCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 90 bp | GGCATGAGGACCACGGGAGCGAACTCGCAGGGCCCATCGCGAGCCTaGTGCAGGTGGCCATGGTGCGCGCGGGGTGCATGTCGGGCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GMRTTGANSQGPSRA*CRWPWCARGACRAR Trigger: GCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGAGTTCGCTCCCGTGGTCCTCATGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 72 bp | CAGGGCCCATCGCGAGCCTTGTGCAGGTGGCCATGGTaGGCGCGGGGTGCATGTCGGGCGCGCAGACGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: QGPSRALCRWPW*ARGACRARRRS Trigger: GCTACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | TCGCAGGGCCCATCGCGAGCCTTGTGCAGGTGGCCATaGTGCGCGCGGGGTGCATGTCGGGCGCGCAGACGT | + |
|
Preference number: 6 (lower is better) Translates to: SQGPSRALCRWP*CARGACRARRR Trigger: ACGTCTGCGCGCCCGACATGCACCCCGCGCGCACCATGGCCACCTGCACAAGGCTCGCGATGGGCCCTGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 72 bp | GGGGTGCATGTCGGGCGCGCAGACGTAGCGCGCAGATaGTGGAGTAGGAGCGGCCGTCAGAGCCGCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: GVHVGRADVARR*WSRSGRQSRRR Trigger: CCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCATCTGCGCGCTACGTCTGCGCGCCCGACATGCACCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | GTGCATGTCGGGCGCGCAGACGTAGCGCGCAGATGCTaGAGTAGGAGCGGCCGTCAGAGCCGCAGACGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: VHVGRADVARRC*SRSGRQSRRRR Trigger: GCGCCGTCTGCGGCTCTGACGGCCGCTCCTACTCCAGCATCTGCGCGCTACGTCTGCGCGCCCGACATGCAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | GAAGGGCCCCCTCGCACCTGGACAGCTATATTGACATaGTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: EGPPRTWTAILT*SPGNSSNPSVP Trigger: GGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS TCA 72 bp | GGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATTaGCATGGTCTCCGGGCAACTCCTCCAACCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GQKGPLAPGQLY*HGLRATPPTPR Trigger: CCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | GTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCCTCTaGAGAGTGCTTGACCTTCTTCCAGGTGATGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGQLLQPLGAL*RVLDLLPGDDR Trigger: CCGGTCATCACCTGGAAGAAGGTCAAGCACTCTCCAGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 90 bp | GTGGTCTCATGGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATaGACATGGTCTCCGGGCAACTCCTCCAACCCCTCGGTGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VVSWSEGPPRTWTAI*TWSPGNSSNPSVPS Trigger: AGAGGGCACCGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 72 bp | CGTGCCGTGGGACTGAGCCTCTCCAATGGCGTTGGCTaGGTGGCAGTGGTACACTCCCTCATCTTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RAVGLSLSNGVG*VAVVHSLIFLP Trigger: AGGAAGGAAGATGAGGGAGTGTACCACTGCCACGCAGCCAACGCCATTGGAGAGGCTCAGTCCCACGGCACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 72 bp | TGGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATATaGACATGGTCTCCGGGCAACTCCTCCAACCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WSEGPPRTWTAI*TWSPGNSSNPS Trigger: CGAGGGGTTGGAGGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS GCA 72 bp | GGCTTTTGTATCTGTTCAGATCGAGGACCGTCACCGTaGCGTGGGACTGAGCCTCTCCAATGGCGTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GFCICSDRGPSP*RGTEPLQWRWL Trigger: CAGCCAACGCCATTGGAGAGGCTCAGTCCCACGGCACGGTGACGGTCCTCGATCTGAACAGATACAAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | GATGTGGTCTCATGGTCAGAAGGGCCCCCTCGCACCTaGACAGCTATATTGACATGGTCTCCGGGCAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVVSWSEGPPRT*TAILTWSPGNS Trigger: GGAGTTGCCCGGAGACCATGTCAATATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCACATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 90 bp | GCTGCGTGGCAGTGGTACACTCCCTCATCTTCCTTCCTCAGAGGGTaGATCAAAATCCAGGATGTGGTCTCATGGTCAGAAGGGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAWQWYTPSSSFLRG*IKIQDVVSWSEGPP Trigger: AGGGGGCCCTTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAGGAAGGAAGATGAGGGAGTGTACCACTGCCACGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CCA 72 bp | CTCAGAGGGTTGATCAAAATCCAGGATGTGGTCTCATaGTCAGAAGGGCCCCCTCGCACCTGGACAGCTATA | + |
|
Preference number: 6 (lower is better) Translates to: LRGLIKIQDVVS*SEGPPRTWTAI Trigger: TATAGCTGTCCAGGTGCGAGGGGGCCCTTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||
| CDS CAA 72 bp | CAGTGGTACACTCCCTCATCTTCCTTCCTCAGAGGGTaGATCAAAATCCAGGATGTGGTCTCATGGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QWYTPSSSFLRG*IKIQDVVSWSE Trigger: TTCTGACCATGAGACCACATCCTGGATTTTGATCAACCCTCTGAGGAAGGAAGATGAGGGAGTGTACCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044297.7 |
||