Pregenerated sensors for IGFBP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023046Ensembl transcript IDs: ENSMUST00000023807.7
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATaGCAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGG | + |
Preference number: 1 (lower is better) Translates to: GLGAQSYSLLHIQLK*QPPVPAGVLEAPSG Trigger: CCCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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3UTR-3UTR CCA 90 bp | GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCGCCCCCTGTTCCTGCTaGCGTCCTGGAGGCTCCCTC | + |
Preference number: 2 (lower is better) Translates to: VLLVHKPTAIFLTSCVKAAPCSC*RPGGSL Trigger: GAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGC...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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3UTR-3UTR GCA 90 bp | ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGCACAGAGTTATTCATTaGTTCACATACAGCTCAAAT | + |
Preference number: 2 (lower is better) Translates to: TVLLVHKPTAIFLTSCVKHRVIH*FTYSSN Trigger: ATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTG...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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3UTR TCA 72 bp | GCACAGAGTTATTCATTGCTTCACATACAGCTCAAATaGCAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCT | + |
Preference number: 3 (lower is better) Translates to: AQSYSLLHIQLK*QPPVPAGVLEA Trigger: AGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | AGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGGCGACACTGGCAAAGGCTaGCCCATCGGATCCACACAC | + |
Preference number: 4 (lower is better) Translates to: SSNDSPLFLLASWRLPRGDTGKG*PIGSTH Trigger: GTGTGTGGATCCGATGGGCCAGCCTTTGCCAGTGTC...GCCCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR GCA 90 bp | ACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGACCTCAGTCTGGAGCTaGTGCAGTACTGAATCCAAG | + |
Preference number: 4 (lower is better) Translates to: TAQMTAPCSCWRPGGSLGTSVWS*CSTESK Trigger: CTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGT...CCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTCCGACGGCCCTCTaGCGCGTTGACAGCGGCCCT | + |
Preference number: 4 (lower is better) Translates to: LFIASHTAQMTAPCSCWRPPTAL*RVDSGP Trigger: AGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGG...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | ACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTGCTTCCTTGACCATCTaGAGACACTGGCAAAGGCTG | + |
Preference number: 4 (lower is better) Translates to: TYSSNDSPLFLLASWRLPASLTI*RHWQRL Trigger: CAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGC...AGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTTCGTTCTCTCGGGGTTaGCACTGCAGTCCTGGGGCG | + |
Preference number: 4 (lower is better) Translates to: LFIASHTAQMTAPCSCWRSFSRG*HCSPGA Trigger: CGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGA...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR TCA 90 bp | GGGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATGACAGCCGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCA | + |
Preference number: 4 (lower is better) Translates to: GSWGTELFIASHTAQMTAELLQY*IQVSAA Trigger: TGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTC...GGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR GCA 90 bp | GTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCTGGCAGAGCACTGAGTaGTTCCTTGACCATCTGGAG | + |
Preference number: 4 (lower is better) Translates to: VLGHRVIHCFTYSSNDSPWQSTE*FLDHLE Trigger: CTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCA...GGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR TCA 90 bp | TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTTTCGGTAGAAGCCTCTaGGGTCACAGTTTGGCACAT | + |
Preference number: 4 (lower is better) Translates to: LFIASHTAQMTAPCSCWRFGRSL*GHSLAH Trigger: ATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAA...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR GCA 90 bp | GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCTCTCGGGGTTGGCACTaGAGTCCTGGGGCGCACTTA | + |
Preference number: 4 (lower is better) Translates to: VLLVHKPTAIFLTSCVKASRGWH*SPGAHL Trigger: TAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGA...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: VLLVHKPTAIFLTSCVKALALQS*GALRAV Trigger: TACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAA...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCCGGGAGGCACCTCCTTaGGGTTTGCTCTCCTTTGTA | + |
Preference number: 4 (lower is better) Translates to: VLLVHKPTAIFLTSCVKAREAPP*GLLSFV Trigger: TACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCG...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR GCA 90 bp | GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTG | + |
Preference number: 4 (lower is better) Translates to: VLLVHKPTAIFLTSCVKAVRGFF*RSLWFV Trigger: CACAAACCACAGAGACCGGCAGAAGAATCCACGGAC...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CCA 90 bp | ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGCGGAAGACCTCAGTCTaGAGCTGCTGCAGTACTGAA | + |
Preference number: 4 (lower is better) Translates to: TVLLVHKPTAIFLTSCVKRKTSV*SCCSTE Trigger: TTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCG...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 90 bp | GGTTTGCTCTCCTTTGTAGTCTCCTCCGACGGCCCTCTGGCGCGTTaGCAGCGGCCCTGGCCGATTAGCAGCGCCCGCAAAGGCGCCTCT | + |
Preference number: 5 (lower is better) Translates to: GLLSFVVSSDGPLAR*QRPWPISSARKGAS Trigger: AGAGGCGCCTTTGCGGGCGCTGCTAATCGGCCAGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGGAGACTACAAAGGAGAGCAAACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 90 bp | CCGCAAAGGCGCCTCTTCGTTCTCTCGGGGTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTAGACCCCGCACGGTTGTCCCTCTCT | + |
Preference number: 5 (lower is better) Translates to: PQRRLFVLSGLALQS*GALRAVDPARLSLS Trigger: AGAGAGGGACAACCGTGCGGGGTCTACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGAAGAGGCGCCTTTGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 90 bp | GCTCCTGGCAGAGCACTGAGTGCTTCCTTGACCATCTGGAGACACTaGCAAAGGCTGGCCCATCGGATCCACACACCAGCAGGGGCCACG | + |
Preference number: 5 (lower is better) Translates to: APGRALSASLTIWRH*QRLAHRIHTPAGAT Trigger: CGTGGCCCCTGCTGGTGTGTGGATCCGATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 90 bp | ACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCT | + |
Preference number: 5 (lower is better) Translates to: TGLGRIGAAEVRGFF*RSLWFVSREREAPP Trigger: AGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 90 bp | ACGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTGAAC | + |
Preference number: 5 (lower is better) Translates to: TCSASEDLSLELLQY*IQVSAAGAHLTILN Trigger: GTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 90 bp | GGAACGACACTGCTGCTTTCGGTAGAAGCCTCTGAGGTCACAGTTTaGCACATAGAGCCCACGTGCTCCGCCTCGGAAGACCTCAGTCTG | + |
Preference number: 5 (lower is better) Translates to: GTTLLLSVEASEVTV*HIEPTCSASEDLSL Trigger: CAGACTGAGGTCTTCCGAGGCGGAGCACGTGGGCTCTATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAAAGCAGCAGTGTCGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 90 bp | AGTACTGAATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTaGACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTGGATTC | + |
Preference number: 5 (lower is better) Translates to: STESKCLRQGPISLS*TGLGRIGAAEVRGF Trigger: GAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 90 bp | GGAAGACCTCAGTCTGGAGCTGCTGCAGTACTGAATCCAAGTGTCTaGGGCAGGGGCCCATCTCACTATCTTGAACAGGATTGGGCCGTA | + |
Preference number: 5 (lower is better) Translates to: GRPQSGAAAVLNPSV*GRGPSHYLEQDWAV Trigger: TACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CAA 90 bp | GGCGTGAAGGTGGGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCGTAGACCCCGCACGGTaGTCCCTCTCTCCTGAGACA | + |
Preference number: 5 (lower is better) Translates to: GVKVGLGAQSYSLLHIQLVDPAR*SLSPET Trigger: TGTCTCAGGAGAGAGGGACAACCGTGCGGGGTCTAC...GAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACCCACCTTCACGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CAA 90 bp | TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTGCCGGTCTCTGTGGTTaGTGTCACGAGAGCGGGAGG | + |
Preference number: 5 (lower is better) Translates to: LFIASHTAQMTAPCSCWRAGLCG*CHESGR Trigger: CCTCCCGCTCTCGTGACACAAACCACAGAGACCGGC...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS-3UTR CAA 90 bp | ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCACCTCCTTGGGGTTaGCTCTCCTTTGTAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: TVLLVHKPTAIFLTSCVKAPPWG*LSFVVS Trigger: GGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGC...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 72 bp | TCCTTTGTAGTCTCCTCCGACGGCCCTCTGGCGCGTTaGCAGCGGCCCTGGCCGATTAGCAGCGCCCGCAAA | + |
Preference number: 6 (lower is better) Translates to: SFVVSSDGPLAR*QRPWPISSARK Trigger: TTTGCGGGCGCTGCTAATCGGCCAGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGGAGACTACAAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 72 bp | TCTCCTGAGACAGCCTCCGGCTTCTGTACAGCCGTCTaGAGGCGATCCCGCGTCTTCCTCCTCCACGCAGCC | + |
Preference number: 6 (lower is better) Translates to: SPETASGFCTAV*RRSRVFLLHAA Trigger: GGCTGCGTGGAGGAGGAAGACGCGGGATCGCCTGCAGACGGCTGTACAGAAGCCGGAGGCTGTCTCAGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 72 bp | CGCCTCTTCGTTCTCTCGGGGTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTAGACCCCGCACGGTTG | + |
Preference number: 6 (lower is better) Translates to: RLFVLSGLALQS*GALRAVDPARL Trigger: CAACCGTGCGGGGTCTACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGAAGAGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 72 bp | ACCCTGAGCCCGCAGCGAACAACAGCATTAGCAGCATaGGCAGCGGCTGCGTGGGCAGCCCATCCCAGGTCA | + |
Preference number: 6 (lower is better) Translates to: TLSPQRTTALAA*AAAAWAAHPRS Trigger: TGACCTGGGATGGGCTGCCCACGCAGCCGCTGCTCATGCTGCTAATGCTGTTGTTCGCTGCGGGCTCAGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 72 bp | CGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTGCTaGAGTACTGAATCCAAGTGTCTGCGGCAGGGGCCC | + |
Preference number: 6 (lower is better) Translates to: RAPPRKTSVWSC*STESKCLRQGP Trigger: GGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 72 bp | CCACGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTaGTGCAGTACTGAATCCAAGTGTCTGCGGCAGGGG | + |
Preference number: 6 (lower is better) Translates to: PRAPPRKTSVWS*CSTESKCLRQG Trigger: CCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS GCA 72 bp | GGCCGTATAGGGGCAGCAGAGGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTGTCACGAGAGCGGGAG | + |
Preference number: 6 (lower is better) Translates to: GRIGAAEVRGFF*RSLWFVSRERE Trigger: CTCCCGCTCTCGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 72 bp | GCCTCGGAAGACCTCAGTCTGGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCAGGGGCCCATCTCACT | + |
Preference number: 6 (lower is better) Translates to: ASEDLSLELLQY*IQVSAAGAHLT Trigger: AGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 72 bp | CTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCTTaGGGTTTGCTCTCCTTTGTAGTCTCCTCCGACGGC | + |
Preference number: 6 (lower is better) Translates to: LWFVSREREAPP*GLLSFVVSSDG Trigger: GCCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 72 bp | GCTCCTGGCAGAGCACTGAGTGCTTCCTTGACCATCTaGAGACACTGGCAAAGGCTGGCCCATCGGATCCAC | + |
Preference number: 6 (lower is better) Translates to: APGRALSASLTI*RHWQRLAHRIH Trigger: GTGGATCCGATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CAA 72 bp | TTTGTGTCACGAGAGCGGGAGGCACCTCCTTGGGGTTaGCTCTCCTTTGTAGTCTCCTCCGACGGCCCTCTG | + |
Preference number: 6 (lower is better) Translates to: FVSREREAPPWG*LSFVVSSDGPL Trigger: CAGAGGGCCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS TCA 72 bp | TCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTaGACAGGATTGGGCCGTATAGGGGCAGCAGAGGTC | + |
Preference number: 6 (lower is better) Translates to: SKCLRQGPISLS*TGLGRIGAAEV Trigger: GACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 72 bp | CTGCTGCTTTCGGTAGAAGCCTCTGAGGTCACAGTTTaGCACATAGAGCCCACGTGCTCCGCCTCGGAAGAC | + |
Preference number: 6 (lower is better) Translates to: LLLSVEASEVTV*HIEPTCSASED Trigger: GTCTTCCGAGGCGGAGCACGTGGGCTCTATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAAAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CAA 72 bp | TCTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCTaGGGGTTTGCTCTCCTTTGTAGTCTCCTCCGACGG | + |
Preference number: 6 (lower is better) Translates to: SVVCVTRAGGTS*GFALLCSLLRR Trigger: CCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CAA 72 bp | TCACCCACTGCTCCTGGCAGAGCACTGAGTGCTTCCTaGACCATCTGGAGACACTGGCAAAGGCTGGCCCAT | + |
Preference number: 6 (lower is better) Translates to: SPTAPGRALSAS*TIWRHWQRLAH Trigger: ATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGCAGTGGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CCA 72 bp | AACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTaGATTCTTCTGCCGGTCTCTGTGGTTTGTGTCACG | + |
Preference number: 6 (lower is better) Translates to: NRIGPYRGSRGP*ILLPVSVVCVT Trigger: CGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |
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CDS CAA 72 bp | ATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTaGAACAGGATTGGGCCGTATAGGGGCAGCAGAGGT | + |
Preference number: 6 (lower is better) Translates to: IQVSAAGAHLTI*NRIGPYRGSRG Trigger: ACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023807.7 |