RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGFBP6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023046

Ensembl transcript IDs: ENSMUST00000023807.7

Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATaGCAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGG +
Preference number: 1 (lower is better)
Translates to: GLGAQSYSLLHIQLK*QPPVPAGVLEAPSG
Trigger: CCCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
3UTR-3UTR CCA 90 bp GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCGCCCCCTGTTCCTGCTaGCGTCCTGGAGGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: VLLVHKPTAIFLTSCVKAAPCSC*RPGGSL
Trigger: GAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGC...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
3UTR-3UTR GCA 90 bp ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGCACAGAGTTATTCATTaGTTCACATACAGCTCAAAT +
Preference number: 2 (lower is better)
Translates to: TVLLVHKPTAIFLTSCVKHRVIH*FTYSSN
Trigger: ATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTG...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
3UTR TCA 72 bp GCACAGAGTTATTCATTGCTTCACATACAGCTCAAATaGCAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCT +
Preference number: 3 (lower is better)
Translates to: AQSYSLLHIQLK*QPPVPAGVLEA
Trigger: AGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp AGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGGCGACACTGGCAAAGGCTaGCCCATCGGATCCACACAC +
Preference number: 4 (lower is better)
Translates to: SSNDSPLFLLASWRLPRGDTGKG*PIGSTH
Trigger: GTGTGTGGATCCGATGGGCCAGCCTTTGCCAGTGTC...GCCCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR GCA 90 bp ACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTCGGGACCTCAGTCTGGAGCTaGTGCAGTACTGAATCCAAG +
Preference number: 4 (lower is better)
Translates to: TAQMTAPCSCWRPGGSLGTSVWS*CSTESK
Trigger: CTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGT...CCCGAGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTCCGACGGCCCTCTaGCGCGTTGACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LFIASHTAQMTAPCSCWRPPTAL*RVDSGP
Trigger: AGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGG...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp ACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTCCTGGAGGCTCCCTGCTTCCTTGACCATCTaGAGACACTGGCAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: TYSSNDSPLFLLASWRLPASLTI*RHWQRL
Trigger: CAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGC...AGGGAGCCTCCAGGACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTTCGTTCTCTCGGGGTTaGCACTGCAGTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LFIASHTAQMTAPCSCWRSFSRG*HCSPGA
Trigger: CGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGA...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR TCA 90 bp GGGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATGACAGCCGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCA +
Preference number: 4 (lower is better)
Translates to: GSWGTELFIASHTAQMTAELLQY*IQVSAA
Trigger: TGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTC...GGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR GCA 90 bp GTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCTGGCAGAGCACTGAGTaGTTCCTTGACCATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLGHRVIHCFTYSSNDSPWQSTE*FLDHLE
Trigger: CTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCA...GGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR TCA 90 bp TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTTTCGGTAGAAGCCTCTaGGGTCACAGTTTGGCACAT +
Preference number: 4 (lower is better)
Translates to: LFIASHTAQMTAPCSCWRFGRSL*GHSLAH
Trigger: ATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAA...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR GCA 90 bp GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCTCTCGGGGTTGGCACTaGAGTCCTGGGGCGCACTTA +
Preference number: 4 (lower is better)
Translates to: VLLVHKPTAIFLTSCVKASRGWH*SPGAHL
Trigger: TAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGA...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: VLLVHKPTAIFLTSCVKALALQS*GALRAV
Trigger: TACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAA...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCCGGGAGGCACCTCCTTaGGGTTTGCTCTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: VLLVHKPTAIFLTSCVKAREAPP*GLLSFV
Trigger: TACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCG...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR GCA 90 bp GTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCCGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTG +
Preference number: 4 (lower is better)
Translates to: VLLVHKPTAIFLTSCVKAVRGFF*RSLWFV
Trigger: CACAAACCACAGAGACCGGCAGAAGAATCCACGGAC...GGCCTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CCA 90 bp ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGCGGAAGACCTCAGTCTaGAGCTGCTGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: TVLLVHKPTAIFLTSCVKRKTSV*SCCSTE
Trigger: TTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCG...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 90 bp GGTTTGCTCTCCTTTGTAGTCTCCTCCGACGGCCCTCTGGCGCGTTaGCAGCGGCCCTGGCCGATTAGCAGCGCCCGCAAAGGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: GLLSFVVSSDGPLAR*QRPWPISSARKGAS
Trigger: AGAGGCGCCTTTGCGGGCGCTGCTAATCGGCCAGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGGAGACTACAAAGGAGAGCAAACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 90 bp CCGCAAAGGCGCCTCTTCGTTCTCTCGGGGTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTAGACCCCGCACGGTTGTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: PQRRLFVLSGLALQS*GALRAVDPARLSLS
Trigger: AGAGAGGGACAACCGTGCGGGGTCTACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGAAGAGGCGCCTTTGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 90 bp GCTCCTGGCAGAGCACTGAGTGCTTCCTTGACCATCTGGAGACACTaGCAAAGGCTGGCCCATCGGATCCACACACCAGCAGGGGCCACG +
Preference number: 5 (lower is better)
Translates to: APGRALSASLTIWRH*QRLAHRIHTPAGAT
Trigger: CGTGGCCCCTGCTGGTGTGTGGATCCGATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 90 bp ACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCT +
Preference number: 5 (lower is better)
Translates to: TGLGRIGAAEVRGFF*RSLWFVSREREAPP
Trigger: AGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 90 bp ACGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: TCSASEDLSLELLQY*IQVSAAGAHLTILN
Trigger: GTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 90 bp GGAACGACACTGCTGCTTTCGGTAGAAGCCTCTGAGGTCACAGTTTaGCACATAGAGCCCACGTGCTCCGCCTCGGAAGACCTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GTTLLLSVEASEVTV*HIEPTCSASEDLSL
Trigger: CAGACTGAGGTCTTCCGAGGCGGAGCACGTGGGCTCTATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAAAGCAGCAGTGTCGTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 90 bp AGTACTGAATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTaGACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTGGATTC +
Preference number: 5 (lower is better)
Translates to: STESKCLRQGPISLS*TGLGRIGAAEVRGF
Trigger: GAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 90 bp GGAAGACCTCAGTCTGGAGCTGCTGCAGTACTGAATCCAAGTGTCTaGGGCAGGGGCCCATCTCACTATCTTGAACAGGATTGGGCCGTA +
Preference number: 5 (lower is better)
Translates to: GRPQSGAAAVLNPSV*GRGPSHYLEQDWAV
Trigger: TACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CAA 90 bp GGCGTGAAGGTGGGTCTTGGGGCACAGAGTTATTCATTGCTTCACATACAGCTCGTAGACCCCGCACGGTaGTCCCTCTCTCCTGAGACA +
Preference number: 5 (lower is better)
Translates to: GVKVGLGAQSYSLLHIQLVDPAR*SLSPET
Trigger: TGTCTCAGGAGAGAGGGACAACCGTGCGGGGTCTAC...GAGCTGTATGTGAAGCAATGAATAACTCTGTGCCCCAAGACCCACCTTCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CAA 90 bp TTATTCATTGCTTCACATACAGCTCAAATGACAGCCCCCTGTTCCTGCTGGCGTGCCGGTCTCTGTGGTTaGTGTCACGAGAGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: LFIASHTAQMTAPCSCWRAGLCG*CHESGR
Trigger: CCTCCCGCTCTCGTGACACAAACCACAGAGACCGGC...ACGCCAGCAGGAACAGGGGGCTGTCATTTGAGCTGTATGTGAAGCAATGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS-3UTR CAA 90 bp ACTGTTTTATTAGTACACAAGCCAACAGCAATCTTTCTAACTAGCTGTGTAAAGGCACCTCCTTGGGGTTaGCTCTCCTTTGTAGTCTCC +
Preference number: 5 (lower is better)
Translates to: TVLLVHKPTAIFLTSCVKAPPWG*LSFVVS
Trigger: GGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGC...CTTTACACAGCTAGTTAGAAAGATTGCTGTTGGCTTGTGTACTAATAAAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 72 bp TCCTTTGTAGTCTCCTCCGACGGCCCTCTGGCGCGTTaGCAGCGGCCCTGGCCGATTAGCAGCGCCCGCAAA +
Preference number: 6 (lower is better)
Translates to: SFVVSSDGPLAR*QRPWPISSARK
Trigger: TTTGCGGGCGCTGCTAATCGGCCAGGGCCGCTGTCAACGCGCCAGAGGGCCGTCGGAGGAGACTACAAAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 72 bp TCTCCTGAGACAGCCTCCGGCTTCTGTACAGCCGTCTaGAGGCGATCCCGCGTCTTCCTCCTCCACGCAGCC +
Preference number: 6 (lower is better)
Translates to: SPETASGFCTAV*RRSRVFLLHAA
Trigger: GGCTGCGTGGAGGAGGAAGACGCGGGATCGCCTGCAGACGGCTGTACAGAAGCCGGAGGCTGTCTCAGGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 72 bp CGCCTCTTCGTTCTCTCGGGGTTGGCACTGCAGTCCTaGGGCGCACTTAGGGCTGTAGACCCCGCACGGTTG +
Preference number: 6 (lower is better)
Translates to: RLFVLSGLALQS*GALRAVDPARL
Trigger: CAACCGTGCGGGGTCTACAGCCCTAAGTGCGCCCCAGGACTGCAGTGCCAACCCCGAGAGAACGAAGAGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 72 bp ACCCTGAGCCCGCAGCGAACAACAGCATTAGCAGCATaGGCAGCGGCTGCGTGGGCAGCCCATCCCAGGTCA +
Preference number: 6 (lower is better)
Translates to: TLSPQRTTALAA*AAAAWAAHPRS
Trigger: TGACCTGGGATGGGCTGCCCACGCAGCCGCTGCTCATGCTGCTAATGCTGTTGTTCGCTGCGGGCTCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 72 bp CGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTGCTaGAGTACTGAATCCAAGTGTCTGCGGCAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: RAPPRKTSVWSC*STESKCLRQGP
Trigger: GGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 72 bp CCACGTGCTCCGCCTCGGAAGACCTCAGTCTGGAGCTaGTGCAGTACTGAATCCAAGTGTCTGCGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: PRAPPRKTSVWS*CSTESKCLRQG
Trigger: CCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGCGGAGCACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS GCA 72 bp GGCCGTATAGGGGCAGCAGAGGTCCGTGGATTCTTCTaGCGGTCTCTGTGGTTTGTGTCACGAGAGCGGGAG +
Preference number: 6 (lower is better)
Translates to: GRIGAAEVRGFF*RSLWFVSRERE
Trigger: CTCCCGCTCTCGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 72 bp GCCTCGGAAGACCTCAGTCTGGAGCTGCTGCAGTACTaGATCCAAGTGTCTGCGGCAGGGGCCCATCTCACT +
Preference number: 6 (lower is better)
Translates to: ASEDLSLELLQY*IQVSAAGAHLT
Trigger: AGTGAGATGGGCCCCTGCCGCAGACACTTGGATTCAGTACTGCAGCAGCTCCAGACTGAGGTCTTCCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 72 bp CTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCTTaGGGTTTGCTCTCCTTTGTAGTCTCCTCCGACGGC +
Preference number: 6 (lower is better)
Translates to: LWFVSREREAPP*GLLSFVVSSDG
Trigger: GCCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 72 bp GCTCCTGGCAGAGCACTGAGTGCTTCCTTGACCATCTaGAGACACTGGCAAAGGCTGGCCCATCGGATCCAC +
Preference number: 6 (lower is better)
Translates to: APGRALSASLTI*RHWQRLAHRIH
Trigger: GTGGATCCGATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CAA 72 bp TTTGTGTCACGAGAGCGGGAGGCACCTCCTTGGGGTTaGCTCTCCTTTGTAGTCTCCTCCGACGGCCCTCTG +
Preference number: 6 (lower is better)
Translates to: FVSREREAPPWG*LSFVVSSDGPL
Trigger: CAGAGGGCCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS TCA 72 bp TCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTTaGACAGGATTGGGCCGTATAGGGGCAGCAGAGGTC +
Preference number: 6 (lower is better)
Translates to: SKCLRQGPISLS*TGLGRIGAAEV
Trigger: GACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 72 bp CTGCTGCTTTCGGTAGAAGCCTCTGAGGTCACAGTTTaGCACATAGAGCCCACGTGCTCCGCCTCGGAAGAC +
Preference number: 6 (lower is better)
Translates to: LLLSVEASEVTV*HIEPTCSASED
Trigger: GTCTTCCGAGGCGGAGCACGTGGGCTCTATGTGCCAAACTGTGACCTCAGAGGCTTCTACCGAAAGCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CAA 72 bp TCTGTGGTTTGTGTCACGAGAGCGGGAGGCACCTCCTaGGGGTTTGCTCTCCTTTGTAGTCTCCTCCGACGG +
Preference number: 6 (lower is better)
Translates to: SVVCVTRAGGTS*GFALLCSLLRR
Trigger: CCGTCGGAGGAGACTACAAAGGAGAGCAAACCCCAAGGAGGTGCCTCCCGCTCTCGTGACACAAACCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CAA 72 bp TCACCCACTGCTCCTGGCAGAGCACTGAGTGCTTCCTaGACCATCTGGAGACACTGGCAAAGGCTGGCCCAT +
Preference number: 6 (lower is better)
Translates to: SPTAPGRALSAS*TIWRHWQRLAH
Trigger: ATGGGCCAGCCTTTGCCAGTGTCTCCAGATGGTCAAGGAAGCACTCAGTGCTCTGCCAGGAGCAGTGGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CCA 72 bp AACAGGATTGGGCCGTATAGGGGCAGCAGAGGTCCGTaGATTCTTCTGCCGGTCTCTGTGGTTTGTGTCACG +
Preference number: 6 (lower is better)
Translates to: NRIGPYRGSRGP*ILLPVSVVCVT
Trigger: CGTGACACAAACCACAGAGACCGGCAGAAGAATCCACGGACCTCTGCTGCCCCTATACGGCCCAATCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7
CDS CAA 72 bp ATCCAAGTGTCTGCGGCAGGGGCCCATCTCACTATCTaGAACAGGATTGGGCCGTATAGGGGCAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: IQVSAAGAHLTI*NRIGPYRGSRG
Trigger: ACCTCTGCTGCCCCTATACGGCCCAATCCTGTTCAAGATAGTGAGATGGGCCCCTGCCGCAGACACTTGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000023807.7