Pregenerated sensors for IGFBP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026185Ensembl transcript IDs: ENSMUST00000027377.9
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGTAAGAGGAGAGGAGGGTGAGGGGTCTAGCCATCCACACTGCTaGCTGCAGGAGGGGACAGACCCGAGAGGCACTGACACACCTTGT | + |
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Preference number: 1 (lower is better) Translates to: WVRGEEGEGSSHPHC*LQEGTDPRGTDTPC Trigger: ACAAGGTGTGTCAGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATGGCTAGACCCCTCACCCTCCTCTCCTCTTACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR GCA 90 bp | CCCAGCCAACTGTCCTGTCCAGGCAACAGGAGGCATCCCTTTCTGTaGCCGCAGCCACCCATGTCCTATGAGTCGACGCACGTCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PSQLSCPGNRRHPFL*PQPPMSYESTHVSF Trigger: GAAACTGACGTGCGTCGACTCATAGGACATGGGTGGCTGCGGGCACAGAAAGGGATGCCTCCTGTTGCCTGGACAGGACAGTTGGCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | ATGGTCGGAAGAGGGTCTTGGAAGGAGAAGAGGAGTGAGCACAGCTaGCCTCCTCCGTATCCTGTGGGGCAGATGTTCCCAAGCCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: MVGRGSWKEKRSEHS*PPPYPVGQMFPSLV Trigger: GACAAGGCTTGGGAACATCTGCCCCACAGGATACGGAGGAGGTCAGCTGTGCTCACTCCTCTTCTCCTTCCAAGACCCTCTTCCGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR GCA 90 bp | TCGGTGCCCCACAAAAGAGCCACACTTGTAGCTCACGAGAAAGGCTaGCTGGACGCAGGCCAAGCTGGCGTTCTGGGTTGTATTTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: SVPHKRATLVAHEKG*LDAGQAGVLGCICE Trigger: TTCACAAATACAACCCAGAACGCCAGCTTGGCCTGCGTCCAGGCAGCCTTTCTCGTGAGCTACAAGTGTGGCTCTTTTGTGGGGCACCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CCA 90 bp | ATGAGCAGCGGGGAGACTCACAAGTTTGGGGGAGGTAGGCTGACCTaGGGAAGGCTAACTGTCTATACAATGACCTCCATCTGTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: MSSGETHKFGGGRLT*GRLTVYTMTSICGS Trigger: TGAGCCACAGATGGAGGTCATTGTATAGACAGTTAGCCTTCCCCAGGTCAGCCTACCTCCCCCAAACTTGTGAGTCTCCCCGCTGCTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | TATGTGGTGTGGTGTGAGACAGTTACTTTCTGCGGGTTGGAAGGCTaGAATGGGGTGACCTGGGCTATGCACTTGATGCACCCTTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: YVVWCETVTFCGLEG*NGVTWAMHLMHPWV Trigger: CACCCAAGGGTGCATCAAGTGCATAGCCCAGGTCACCCCATTTCAGCCTTCCAACCCGCAGAAAGTAACTGTCTCACACCACACCACATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CCA 90 bp | CGTCAGTTTCTTTGCTCTCCCTTTGTGTTGCTCCATGTTCCGGGTTaGAGGGGGCCTCTACTATGCCATGCCATCAAGAGAGCGCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: RQFLCSPFVLLHVPG*RGPLLCHAIKRAQR Trigger: TCTTTGCGCTCTCTTGATGGCATGGCATAGTAGAGGCCCCCTCCAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGAAACTGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CCA 90 bp | GCTGACCTGGGGAAGGCTAACTGTCTATACAATGACCTCCATCTGTaGCTCACAGCGAAGAGCCCACATAAGGGACAGAGGCTCACTCAA | + |
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Preference number: 1 (lower is better) Translates to: ADLGKANCLYNDLHL*LTAKSPHKGQRLTQ Trigger: TTGAGTGAGCCTCTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAGACAGTTAGCCTTCCCCAGGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | GCCAGTGGGTTACAGATGGATCTGGCAGGTTTATGTGGTGTGGTGTaGGACAGTTACTTTCTGCGGGTTGGAAGGCTGAAATGGGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: ASGLQMDLAGLCGVV*DSYFLRVGRLKWGD Trigger: GTCACCCCATTTCAGCCTTCCAACCCGCAGAAAGTAACTGTCTCACACCACACCACATAAACCTGCCAGATCCATCTGTAACCCACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | TCTCAAGTCTGGATCCTGCCTCAGTTACCCACCATCTGGGCCCTGTaGCTTGAACTGACCTCATTTCTACCTCAAGTTCTTCCCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: SQVWILPQLPTIWAL*LELTSFLPQVLPLP Trigger: AGGCAGGGGAAGAACTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGGATCCAGACTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | GGATCCTGCCTCAGTTACCCACCATCTGGGCCCTGTGACTTGAACTaGCCTCATTTCTACCTCAAGTTCTTCCCCTGCCTTCTTTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GSCLSYPPSGPCDLN*PHFYLKFFPCLLFP Trigger: AGGAAAAAGAAGGCAGGGGAAGAACTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | AGTCTGGATCCTGCCTCAGTTACCCACCATCTGGGCCCTGTGACTTaGACTGACCTCATTTCTACCTCAAGTTCTTCCCCTGCCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SLDPASVTHHLGPVT*TDLISTSSSSPAFF Trigger: AAAGAAGGCAGGGGAAGAACTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGGATCCAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | TCAAAATCAGGCTGGCAAATGACAACAGTCGTGAAGATCCGGGCCTaGGTTGTCCTGGGCTTTCTACCATCCTCCATCACAGGGAAGGAT | + |
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Preference number: 1 (lower is better) Translates to: SKSGWQMTTVVKIRA*VVLGFLPSSITGKD Trigger: ATCCTTCCCTGTGATGGAGGATGGTAGAAAGCCCAGGACAACTCAGGCCCGGATCTTCACGACTGTTGTCATTTGCCAGCCTGATTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CCA 90 bp | ACCTGGGCTATGCACTTGATGCACCCTTGGGTGCTGGCAGTTACCTaGCTTGGTGGATTCACTTCAACACACGTTTGGAATCATGAGAAG | + |
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Preference number: 1 (lower is better) Translates to: TWAMHLMHPWVLAVT*LGGFTSTHVWNHEK Trigger: CTTCTCATGATTCCAAACGTGTGTTGAAGTGAATCCACCAAGCCAGGTAACTGCCAGCACCCAAGGGTGCATCAAGTGCATAGCCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | GTTGTCCTGGGCTTTCTACCATCCTCCATCACAGGGAAGGATGTTTaGGTCGGGCAGAGGAGACTCATGAAGCACTTGAAGGATTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VVLGFLPSSITGKDV*VGQRRLMKHLKDSL Trigger: CAAAGAATCCTTCAAGTGCTTCATGAGTCTCCTCTGCCCGACTCAAACATCCTTCCCTGTGATGGAGGATGGTAGAAAGCCCAGGACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | GGGGGCAGTGGTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATaGCTGCTCAAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: GGSGTPVSTWQISVR*LLKMRRNNGRKERL Trigger: AAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTACCACTGCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | AGGCTGCCTGGACGCAGGCCAAGCTGGCGTTCTGGGTTGTATTTGTaGAATATGGATTTTTCCCAGAATGAGGAAGATCTTCAGTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: RLPGRRPSWRSGLYL*NMDFSQNEEDLQCP Trigger: AGGACACTGAAGATCTTCCTCATTCTGGGAAAAATCCATATTTCACAAATACAACCCAGAACGCCAGCTTGGCCTGCGTCCAGGCAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR GCA 90 bp | AGTCTTTGTCAGAGGAACGTAGAGTCTTTTATTCTCCAGGTTCCCTaGTTTGTTCTGGCTGGTCAAGACTGGCTGGGGTGGAGAATAGGT | + |
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Preference number: 1 (lower is better) Translates to: SLCQRNVESFILQVP*FVLAGQDWLGWRIG Trigger: ACCTATTCTCCACCCCAGCCAGTCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTCCTCTGACAAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR GCA 90 bp | AGCAAAAGGGCAGATTCAGCCTTGGTTGTGGAGTCCTTTCTGCCTTaGTGTTTCTCTCTTCTCTCTCTAATCCTATCTGTCCTTCCCTCT | + |
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Preference number: 1 (lower is better) Translates to: SKRADSALVVESFLP*CFSLLSLILSVLPS Trigger: AGAGGGAAGGACAGATAGGATTAGAGAGAGAAGAGAGAAACAGCAAGGCAGAAAGGACTCCACAACCAAGGCTGAATCTGCCCTTTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR GCA 90 bp | GCAGTGGTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTaGTCAAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: AVVPQYPLGKSQSDD*SRCGEIMAERRDLG Trigger: ACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTACCACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR TCA 90 bp | GAGCCTTTTGTTAAGCACCTCTTTGTTGAAGAAGCCAGTGGGCAATaGGATGCTTCTCTTGGATCAAAATCAGGCTGGCAAATGACAACA | + |
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Preference number: 1 (lower is better) Translates to: EPFVKHLFVEEASGQ*DASLGSKSGWQMTT Trigger: TGTTGTCATTTGCCAGCCTGATTTTGATCCAAGAGAAGCATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAAAAGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACGAAGGACAGCTGCCCTaGCTGGGATGGGCAGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDEGQLP*LGWAGG Trigger: ACCACCTGCCCATCCCAGGCAGGGCAGCTGTCCTTC...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACTTCCCTGCTTTGTTCTaGCTGGTCAAGACTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDFPALF*LVKTGW Trigger: CCAGCCAGTCTTGACCAGCCAGAACAAAGCAGGGAA...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACGTCGGAAGAGGGTCTTaGAAGGAGAAGAGGAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDVGRGS*KEKRSE Trigger: CTCACTCCTCTTCTCCTTCCAAGACCCTCTTCCGAC...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | GGAAGGCTGAAATGGGGTGACCTGGGCTATGCACTTGATGCACCCTaGGGTGCTGGCAGTTACCTGGCTTGGTGGATTCACTTCAACACA | + |
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Preference number: 2 (lower is better) Translates to: GRLKWGDLGYALDAP*GAGSYLAWWIHFNT Trigger: TGTGTTGAAGTGAATCCACCAAGCCAGGTAACTGCCAGCACCCAAGGGTGCATCAAGTGCATAGCCCAGGTCACCCCATTTCAGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACGGCCTGAAGTTGAACTaGAGTTGTGCTGTCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDGLKLN*SCAVFP Trigger: TGGAAAGACAGCACAACTTCAGTTCAACTTCAGGCC...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTGGTGGAGGGAGGCGCTaGCTGGAGTTGGGGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLGGGRR*LELGLG Trigger: CCCCAGCCCCAACTCCAGCCAGCGCCTCCCTCCACC...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAAGCCATCCACACTGCTaGCTGCAGGAGGGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGSHPHC*LQEGTD Trigger: GTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATGGCT...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | ACGTCAGTTTCTTTGCTCTCCCTTTGTGTTGCTCCATGTTCCGGGTaGGAGGGGGCCTCTACTATGCCATGCCATCAAGAGAGCGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TSVSLLSLCVAPCSG*EGASTMPCHQESAK Trigger: CTTTGCGCTCTCTTGATGGCATGGCATAGTAGAGGCCCCCTCCAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGAAACTGACGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | GGAAGAAACCTTCCACGGGATAGTAGAGGTGGGGACAGGCCATACTaGGGCCTACTGCTGTGGATAAACCCAACAGAGAGGCCTCTAATG | + |
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Preference number: 2 (lower is better) Translates to: GRNLPRDSRGGDRPY*GLLLWINPTERPLM Trigger: CATTAGAGGCCTCTCTGTTGGGTTTATCCACAGCAGTAGGCCCAAGTATGGCCTGTCCCCACCTCTACTATCCCGTGGAAGGTTTCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGACTCTGTGGAAGTCTCTaGCCCCACCCTCCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGLCGSL*PHPPLP Trigger: AGGAAGTGGAGGGTGGGGGCAGAGACTTCCACAGAG...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | GAGTCTAGTGAAATCAAGGGCCGAAGCCACGCGCTTCTGAATTGCTaGTCACCCTGGAGAATCAAGTCTTTCCAGTGTTGGGGGTGCGTA | + |
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Preference number: 2 (lower is better) Translates to: ESSEIKGRSHALLNC*SPWRIKSFQCWGCV Trigger: TACGCACCCCCAACACTGGAAAGACTTGATTCTCCAGGGTGACAAGCAATTCAGAAGCGCGTGGCTTCGGCCCTTGATTTCACTAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCCTCCTCCACAGAGGCTaGCGGGCCAGCTTTGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILALLHRG*RASFES Trigger: AGACTCAAAGCTGGCCCGGCAGCCTCTGTGGAGGAG...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | TCTACCTTCCTTTTCCCCATCCAGAGAGACTTGGAGAGGAGGCCAGAGTCTGTGAAATCACCCTGCACTTaGGTAAGAGGAGAGGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: STFLFPIQRDLERRPESVKSPCT*VRGEEG Trigger: ACCCTCCTCTCCTCTTACCCAAGTGCAGGGTGATTT...CACAGACTCTGGCCTCCTCTCCAAGTCTCTCTGGATGGGGAAAAGGAAGGTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGGCCTCTACTATGCCATaGCATCAAGAGAGCGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQASTMP*HQESAK Trigger: CTTTGCGCTCTCTTGATGGCATGGCATAGTAGAGGC...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | TCTACCTTCCTTTTCCCCATCCAGAGAGACTTGGAGAGGAGGCCAGAGTCTGTGGGCAGTTACCTGGCTTaGTGGATTCACTTCAACACA | + |
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Preference number: 2 (lower is better) Translates to: STFLFPIQRDLERRPESVGSYLA*WIHFNT Trigger: TGTGTTGAAGTGAATCCACCAAGCCAGGTAACTGCC...CACAGACTCTGGCCTCCTCTCCAAGTCTCTCTGGATGGGGAAAAGGAAGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAGTTGGAAGGCTGAAATaGGGTGACCTGGGCTATGCA | + |
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Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGVGRLK*GDLGYA Trigger: TGCATAGCCCAGGTCACCCCATTTCAGCCTTCCAAC...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | TCTACCTTCCTTTTCCCCATCCAGAGAGACTTGGAGAGGAGGCCAGAGTCTGTGCCGAGTCTCCTCTCCTaGAAGGTTATCTTCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: STFLFPIQRDLERRPESVPSLLS*KVIFSL Trigger: AAGACTGAAGATAACCTTCCAGGAGAGGAGACTCGG...CACAGACTCTGGCCTCCTCTCCAAGTCTCTCTGGATGGGGAAAAGGAAGGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTCCTGGGATGGGCAGGTaGTTGGGAGGTTGCCATGGC | + |
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Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLPGMGR*LGGCHG Trigger: GCCATGGCAACCTCCCAACCACCTGCCCATCCCAGG...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR TCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAATGCCACACTTTTTCTaGCCCCAGGCTAGAGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGMPHFF*PQARAE Trigger: TTCAGCTCTAGCCTGGGGTCAGAAAAAGTGTGGCAT...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGACACGCGCTTCTGAATTaGTTGTCACCCTGGAGAATC | + |
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Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGHALLN*LSPWRI Trigger: GATTCTCCAGGGTGACAAGCAATTCAGAAGCGCGTG...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACACTTCAACACACGTTTaGAATCATGAGAAGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDTSTHV*NHEKIQ Trigger: TTGGATCTTCTCATGATTCCAAACGTGTGTTGAAGT...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR CCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCCCCCATCCATGTCCATaGTCTCTGTATCCTGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVPHPCP*SLYPGF Trigger: GAACCCAGGATACAGAGACCATGGACATGGATGGGG...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | AGTTGTCCTGGGCTTTCTACCATCCTCCATCACAGGGAAGGATGTTaGAGTCGGGCAGAGGAGACTCATGAAGCACTTGAAGGATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SCPGLSTILHHREGC*SRAEETHEALEGFF Trigger: AAAGAATCCTTCAAGTGCTTCATGAGTCTCCTCTGCCCGACTCAAACATCCTTCCCTGTGATGGAGGATGGTAGAAAGCCCAGGACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR GCA 90 bp | TCTACCTTCCTTTTCCCCATCCAGAGAGACTTGGAGAGGAGGCCAGAGTCTGTGCTCAAGTTCTTCCCCTaGCTTCTTTTTCCTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: STFLFPIQRDLERRPESVLKFFP*LLFPLK Trigger: TTTGAGAGGAAAAAGAAGGCAGGGGAAGAACTTGAG...CACAGACTCTGGCCTCCTCTCCAAGTCTCTCTGGATGGGGAAAAGGAAGGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 90 bp | AAGCAAAAGGGCAGATTCAGCCTTGGTTGTGGAGTCCTTTCTGCCTaGCTGTTTCTCTCTTCTCTCTCTAATCCTATCTGTCCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: KQKGRFSLGCGVLSA*LFLSSLSNPICPSL Trigger: GAGGGAAGGACAGATAGGATTAGAGAGAGAAGAGAGAAACAGCAAGGCAGAAAGGACTCCACAACCAAGGCTGAATCTGCCCTTTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR-3UTR TCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCCCCTGTGACTTGAACTaGCCTCATTTCTACCTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVPCDLN*PHFYLK Trigger: CTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGG...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGTGGCCTAAGATATATTaGAGTTTGAGTTGGGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQWPKIY*SLSWGL Trigger: CAACCCCCAACTCAAACTTCAATATATCTTAGGCCA...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGGATGACTGCTCAAGATaGGGAGAAATAATGGCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQDDCSR*GEIMAE Trigger: TTCTGCCATTATTTCTCCGCATCTTGAGCAGTCATC...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAGTGCTGGCAGTTACCTaGCTTGGTGGATTCACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRVLAVT*LGGFTS Trigger: TGAAGTGAATCCACCAAGCCAGGTAACTGCCAGCAC...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTGGGCCTGAGTTGTCCTaGGCTTTCTACCATCCTCCA | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLGPELS*AFYHPP Trigger: TGGAGGATGGTAGAAAGCCCAGGACAACTCAGGCCC...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 90 bp | AAAAACCAAAAACAACCGGTAGGCGTCTCGGAATCTGAAGGAGTCTaGTCTGAACTGTACTATCCGTGTGACAGGCTACTGTGTGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KNQKQPVGVSESEGV*SELYYPCDRLLCDS Trigger: ACTGTCACACAGTAGCCTGTCACACGGATAGTACAGTTCAGACAAGACTCCTTCAGATTCCGAGACGCCTACCGGTTGTTTTTGGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCTTGTGGAGTCCTTTCTaGCTTGCTGTTTCTCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVLWSPF*LAVSLF Trigger: GAAGAGAGAAACAGCAAGGCAGAAAGGACTCCACAA...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCCTGAGTTCACTTGTCTaGTGGGGGAAAACCTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVLSSLV*WGKTYL Trigger: AAGATAGGTTTTCCCCCAGCAGACAAGTGAACTCAG...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCGCACGTCAGTTTCTTTaGTCTCCCTTTGTGTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILAARQFL*SPFVLL Trigger: GAGCAACACAAAGGGAGAGCAAAGAAACTGACGTGC...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAAATTGCTTGTCACCCTaGAGAATCAAGTCTTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGNCLSP*RIKSFQ Trigger: CTGGAAAGACTTGATTCTCCAGGGTGACAAGCAATT...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTCGTGTGTCTCAAGTCTaGATCCTGCCTCAGTTACCC | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLRVSQV*ILPQLP Trigger: GGGTAACTGAGGCAGGATCCAGACTTGAGACACACG...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 90 bp | CTCCTGGAAGGTTATCTTCAGTCTTCAAAGACAGTCCTGAGCCTTTaGTTAAGCACCTCTTTGTTGAAGAAGCCAGTGGGCAATGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: LLEGYLQSSKTVLSL*LSTSLLKKPVGNEM Trigger: CATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAAAAGGCTCAGGACTGTCTTTGAAGACTGAAGATAACCTTCCAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCACACGTTTGGAATCATaGGAAGATCCAAATCGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILATRLES*EDPNRC Trigger: GCACCGATTTGGATCTTCTCATGATTCCAAACGTGT...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCAGATATATTGAAGTTTaGGTTGGGGGTTGGGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVRYIEV*VGGWGC Trigger: ACATCCCCAACCCCCAACTCAAACTTCAATATATCT...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCCAGGTTTATGTGGTGTaGTGTGAGACAGTTACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ENDGEDVTMEISHGRKRVQVYVV*CETVTF Trigger: GAAAGTAACTGTCTCACACCACACCACATAAACCTG...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGAGAGAGTTGATTAGATaGGAGACACCAAGGAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQRELIR*ETPRKI Trigger: AATTTTCCTTGGTGTCTCCCATCTAATCAACTCTCT...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTTCTCTCTCCCTAACCTaGAGAAGGACATCCCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLSLSLT*RRTSLF Trigger: GAAGAGGGATGTCCTTCTCCAGGTTAGGGAGAGAGA...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 90 bp | CTTCAGTCTTCAAAGACAGTCCTGAGCCTTTTGTTAAGCACCTCTTaGTTGAAGAAGCCAGTGGGCAATGAGATGCTTCTCTTGGATCAA | + |
|
Preference number: 2 (lower is better) Translates to: LQSSKTVLSLLLSTS*LKKPVGNEMLLLDQ Trigger: TTGATCCAAGAGAAGCATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAAAAGGCTCAGGACTGTCTTTGAAGACTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTCAAATCTCAGTCAGATaGCTGCTCAAGATGCGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLQISVR*LLKMRR Trigger: TCTCCGCATCTTGAGCAGTCATCTGACTGAGATTTG...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTCTATTCCAACGCTTTaGTTTCTTTCCATCTCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILASIPTL*FLSISR Trigger: GCGAGAGATGGAAAGAAAGCAAAGCGTTGGAATAGA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTATTCTCCAGGTTCCCTaGTTTGTTCTGGCTGGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLILQVP*FVLAGQ Trigger: TTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAAT...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTTGACCAATCTAAACTaGGTGTCACTGAATGCCACA | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILALTNLN*VSLNAT Trigger: TGTGGCATTCAGTGACACCCAGTTTAGATTGGTCAA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTAAGTCTTTCCAGTGTTaGGGGTGCGTACTGACTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLKSFQC*GCVLTS Trigger: AGAAGTCAGTACGCACCCCCAACACTGGAAAGACTT...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 90 bp | CAGTCTTCAAAGACAGTCCTGAGCCTTTTGTTAAGCACCTCTTTGTaGAAGAAGCCAGTGGGCAATGAGATGCTTCTCTTGGATCAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: QSSKTVLSLLLSTSL*KKPVGNEMLLLDQN Trigger: ATTTTGATCCAAGAGAAGCATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAAAAGGCTCAGGACTGTCTTTGAAGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTGGATCAAAATCAGGCTaGCAAATGACAACAGTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLGSKSG*QMTTVV Trigger: CACGACTGTTGTCATTTGCCAGCCTGATTTTGATCC...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTATATTTCCCCTAAATaGGATGAAATGAGTGACGTC | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILAYISPK*DEMSDV Trigger: GACGTCACTCATTTCATCTCATTTAGGGGAAATATA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTCAAATCTCAGAGAGTTaGTTAGATGGGAGACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLQISES*LDGRHQ Trigger: TTGGTGTCTCCCATCTAATCAACTCTCTGAGATTTG...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR TCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAAGGCCCTTTGTCTTATaGAGATCAATTTTCTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRRPFVL*RSIFSF Trigger: GAAAGAGAAAATTGATCTTCATAAGACAAAGGGCCT...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTCTGTCCGTTCAACTTaGTTCAAAAAGGAATACATT | + |
|
Preference number: 2 (lower is better) Translates to: KMRRNNGRKERLRSRILASVRST*FKKEYI Trigger: AATGTATTCCTTTTTGAAGCAAGTTGAACGGACAGA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR GCA 72 bp | AGAGGAGAGGAGGGTGAGGGGTCTAGCCATCCACACTaGTGGCTGCAGGAGGGGACAGACCCGAGAGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RGEEGEGSSHPH*WLQEGTDPRGT Trigger: AGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATGGCTAGACCCCTCACCCTCCTCTCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR GCA 72 bp | CCATGTTCCGGGTTGGAGGGGGCCTCTACTATGCCATaGCATCAAGAGAGCGCAAAGAGCTGTGTCCCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: PCSGLEGASTMP*HQESAKSCVPR Trigger: GCGGGGGACACAGCTCTTTGCGCTCTCTTGATGGCATGGCATAGTAGAGGCCCCCTCCAACCCGGAACATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | CCCCCAGACCTCTGCTCCATCTTCTATGTCTCTCTGTaGAAGTCTCTGCCCCCACCCTCCACTTCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPDLCSIFYVSL*KSLPPPSTSSS Trigger: GGAGGAGGAAGTGGAGGGTGGGGGCAGAGACTTCCACAGAGAGACATAGAAGATGGAGCAGAGGTCTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGAGAGGAGGGTGAGGGGTCTAGCCATCCACACTGCTGGCTGCAGGAGGGGACAGATTCAGCCTTGGTaGTGGAGTCCTTTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EERRVRGLAIHTAGCRRGQIQPW*WSPFCL Trigger: AAGGCAGAAAGGACTCCACAACCAAGGCTGAATCTG...TCCCCTCCTGCAGCCAGCAGTGTGGATGGCTAGACCCCTCACCCTCCTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCACAGGGAAGGATGTTaGAGTCGGGCAGAGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDHREGC*SRAEET Trigger: AGTCTCCTCTGCCCGACTCAAACATCCTTCCCTGTG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | GCATCCCTTTCTGTGCCCGCAGCCACCCATGTCCTATaGGTCGACGCACGTCAGTTTCTTTGCTCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: ASLSVPAATHVL*VDARQFLCSPF Trigger: AAAGGGAGAGCAAAGAAACTGACGTGCGTCGACTCATAGGACATGGGTGGCTGCGGGCACAGAAAGGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR GCA 72 bp | GCCTTGTTTCCAACCGTGTGTCTCAAGTCTGGATCCTaGCTCAGTTACCCACCATCTGGGCCCTGTGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: ALFPTVCLKSGS*LSYPPSGPCDL Trigger: CAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGGATCCAGACTTGAGACACACGGTTGGAAACAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | GGCTGGCAAATGACAACAGTCGTGAAGATCCGGGCCTaGGTTGTCCTGGGCTTTCTACCATCCTCCATCACA | + |
|
Preference number: 3 (lower is better) Translates to: GWQMTTVVKIRA*VVLGFLPSSIT Trigger: TGTGATGGAGGATGGTAGAAAGCCCAGGACAACTCAGGCCCGGATCTTCACGACTGTTGTCATTTGCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | AGGCTAGCCTGGGCCAAAAGCTTCTTGCTCAGGGCATaGTGGGATCGTTGCAAACTTGCCTTCTCTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLAWAKSFLLRA*WDRCKLAFSLP Trigger: AGGGAGAGAGAAGGCAAGTTTGCAACGATCCCATCATGCCCTGAGCAAGAAGCTTTTGGCCCAGGCTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | GGGGAGACTCACAAGTTTGGGGGAGGTAGGCTGACCTaGGGAAGGCTAACTGTCTATACAATGACCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GETHKFGGGRLT*GRLTVYTMTSI Trigger: GATGGAGGTCATTGTATAGACAGTTAGCCTTCCCCAGGTCAGCCTACCTCCCCCAAACTTGTGAGTCTCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | CATCCACACTGCTGGCTGCAGGAGGGGACAGACCCGAGAGGCACTGACACACCTCTCTGTCCGTTCAACTaGCTTCAAAAAGGAATACAT | + |
|
Preference number: 3 (lower is better) Translates to: HPHCWLQEGTDPRGTDTPLCPFN*LQKGIH Trigger: ATGTATTCCTTTTTGAAGCAAGTTGAACGGACAGAG...AGGTGTGTCAGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACACAGTCCTGAGCCTTTaGTTAAGCACCTCTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDTVLSL*LSTSLL Trigger: CAACAAAGAGGTGCTTAACAAAAGGCTCAGGACTGT...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | CCTGCCTCAGTTACCCACCATCTGGGCCCTGTGACTTaGACTGACCTCATTTCTACCTCAAGTTCTTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PASVTHHLGPVT*TDLISTSSSSP Trigger: AGGGGAAGAACTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | TGGCCTCAGTTCCTCCTTGGGGGCCTGAAGTTGAACTaGAGTTGTGCTGTCTTTCCAAGGCATCCTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: WPQFLLGGLKLN*SCAVFPRHPLH Trigger: GTGAAGAGGATGCCTTGGAAAGACAGCACAACTTCAGTTCAACTTCAGGCCCCCAAGGAGGAACTGAGGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | GGGAAGGCTAACTGTCTATACAATGACCTCCATCTGTaGCTCACAGCGAAGAGCCCACATAAGGGACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKANCLYNDLHL*LTAKSPHKGQR Trigger: CCTCTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAGACAGTTAGCCTTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | GTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTaGTCAAGACTGGCTGGGGTGGAGAATAGGTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VFYSPGSLLCSG*SRLAGVENRSW Trigger: CCAGGACCTATTCTCCACCCCAGCCAGTCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACTTAGTCTTTGTAAATTaGGGGATGAAATCACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDLVFVN*GMKSPC Trigger: GCAGGGTGATTTCATCCCCAAATTTACAAAGACTAA...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGCGCACGTCAGTTTCTTaGCTCTCCCTTTGTGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQRTSVS*LSLCVA Trigger: AGCAACACAAAGGGAGAGCAAAGAAACTGACGTGCG...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | GTGGGTTACAGATGGATCTGGCAGGTTTATGTGGTGTaGTGTGAGACAGTTACTTTCTGCGGGTTGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VGYRWIWQVYVV*CETVTFCGLEG Trigger: GCCTTCCAACCCGCAGAAAGTAACTGTCTCACACCACACCACATAAACCTGCCAGATCCATCTGTAACCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | AAAGGTCTGGGCAGGCCAGTGGGTTACAGATGGATCTaGCAGGTTTATGTGGTGTGGTGTGAGACAGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: KGLGRPVGYRWI*QVYVVWCETVT Trigger: AGTAACTGTCTCACACCACACCACATAAACCTGCCAGATCCATCTGTAACCCACTGGCCTGCCCAGACCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAGAAATCACCCTGCACTaGGGTAAGAGGAGAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ERRVFYSPGSLLCSGWSREITLH*GKRRGG Trigger: CCCTCCTCTCCTCTTACCCAAGTGCAGGGTGATTTC...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | TGGATCCTGCCTCAGTTACCCACCATCTGGGCCCTGTaGCTTGAACTGACCTCATTTCTACCTCAAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: WILPQLPTIWAL*LELTSFLPQVL Trigger: AAGAACTTGAGGTAGAAATGAGGTCAGTTCAAGTCACAGGGCCCAGATGGTGGGTAACTGAGGCAGGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR GCA 72 bp | GTTCCTCCTTGGGGGCCTGAAGTTGAACTGAAGTTGTaGTGTCTTTCCAAGGCATCCTCTTCACCCTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: VPPWGPEVELKL*CLSKASSSPFN Trigger: ATTGAAGGGTGAAGAGGATGCCTTGGAAAGACAGCACAACTTCAGTTCAACTTCAGGCCCCCAAGGAGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | ATGCACTTGATGCACCCTTGGGTGCTGGCAGTTACCTaGCTTGGTGGATTCACTTCAACACACGTTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MHLMHPWVLAVT*LGGFTSTHVWN Trigger: ATTCCAAACGTGTGTTGAAGTGAATCCACCAAGCCAGGTAACTGCCAGCACCCAAGGGTGCATCAAGTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGGTTTCTTTTCTCCCCTaGACCAATCTAAACTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQVSFLP*TNLNWV Trigger: CACCCAGTTTAGATTGGTCAAGGGGAGAAAAGAAAC...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCCAAGTCTTTCCAGTGTaGGGGGTGCGTACTGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KMRRNNGRKERLRSRILAQVFPV*GVRTDF Trigger: GAAGTCAGTACGCACCCCCAACACTGGAAAGACTTG...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCTGGCAGTTACCTGGCTaGGTGGATTCACTTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: ENDGEDVTMEISHGRKRVWQLPG*VDSLQH Trigger: GTGTTGAAGTGAATCCACCAAGCCAGGTAACTGCCA...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGGAAGTTGAACTGAAGTaGTGCTGTCTTTCCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQEVELK*CCLSKA Trigger: TGCCTTGGAAAGACAGCACAACTTCAGTTCAACTTC...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATACAATGACCTCCATCTGTGGCTCACAGCGAAGAGCCCACATAAGGGACAGAATGAGATGCTTCTCTaGGATCAAAATCAGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LYNDLHLWLTAKSPHKGQNEMLL*DQNQAG Trigger: GCCAGCCTGATTTTGATCCAAGAGAAGCATCTCATT...CTGTCCCTTATGTGGGCTCTTCGCTGTGAGCCACAGATGGAGGTCATTGTATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CCA 72 bp | AGAAAGGCTGCCTGGACGCAGGCCAAGCTGGCGTTCTaGGTTGTATTTGTGAAATATGGATTTTTCCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: RKAAWTQAKLAF*VVFVKYGFFPE Trigger: TTCTGGGAAAAATCCATATTTCACAAATACAACCCAGAACGCCAGCTTGGCCTGCGTCCAGGCAGCCTTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAGCGCTTCTGAATTGCTaGTCACCCTGGAGAATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRALLNC*SPWRIK Trigger: CTTGATTCTCCAGGGTGACAAGCAATTCAGAAGCGC...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCGTGAGTACAAGCCCCTaGGTTTTCTCCACCTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KMRRNNGRKERLRSRILAVSTSP*VFSTSH Trigger: ATGAGAGGTGGAGAAAACCAAGGGGCTTGTACTCAC...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCAGACTCATGAAGCACTaGAAGGATTCTTTGGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ENDGEDVTMEISHGRKRVRLMKH*KDSLAS Trigger: TGAGGCCAAAGAATCCTTCAAGTGCTTCATGAGTCT...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCTTAAGCACCTCTTTGTaGAAGAAGCCAGTGGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: ENDGEDVTMEISHGRKRVLSTSL*KKPVGN Trigger: ATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAA...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTTGTTAAGCACCTCTTaGTTGAAGAAGCCAGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: KMRRNNGRKERLRSRILALLSTS*LKKPVG Trigger: GCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCAGAAACGTAGAGTCTTaGTCAGAGGAACGTAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: ENDGEDVTMEISHGRKRVRNVES*SEERRV Trigger: GACTCTACGTTCCTCTGACAAAGACTCTACGTTTCT...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | GCTTGGTGGATTCACTTCAACACACGTTTGGAATCATaGGAAGATCCAAATCGGTGCCCCACAAAAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: AWWIHFNTRLES*EDPNRCPTKEP Trigger: TGGCTCTTTTGTGGGGCACCGATTTGGATCTTCTCATGATTCCAAACGTGTGTTGAAGTGAATCCACCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | AGAGACTTAGGTCTAGGATACTGGCCTAAGATATATTaGAGTTTGAGTTGGGGGTTGGGGATGTTGTGCGGG | + |
|
Preference number: 3 (lower is better) Translates to: RDLGLGYWPKIY*SLSWGLGMLCG Trigger: CCCGCACAACATCCCCAACCCCCAACTCAAACTTCAATATATCTTAGGCCAGTATCCTAGACCTAAGTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR GCA 72 bp | CCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTaGTCAAGATGCGGAGAAATAATGGCAGAAAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PQYPLGKSQSDD*SRCGEIMAERR Trigger: TCTCCTTTCTGCCATTATTTCTCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGACTCTATTCCAACGCTTaGCTTTCTTTCCATCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRLYSNA*LSFHLS Trigger: CGAGAGATGGAAAGAAAGCAAAGCGTTGGAATAGAG...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | GTTAAGCACCTCTTTGTTGAAGAAGCCAGTGGGCAATaGGATGCTTCTCTTGGATCAAAATCAGGCTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VKHLFVEEASGQ*DASLGSKSGWQ Trigger: TTGCCAGCCTGATTTTGATCCAAGAGAAGCATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCTCAAATCTCAGAGAGTaGATTAGATGGGAGACACCA | + |
|
Preference number: 3 (lower is better) Translates to: KMRRNNGRKERLRSRILASNLRE*IRWETP Trigger: TGGTGTCTCCCATCTAATCAACTCTCTGAGATTTGA...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR TCA 72 bp | TTATATGCCTATAAAGTCTACATGGAGTCTTGTGGGTaGGTACAAGCCCCTTGGTTTTCTCCACCTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LYAYKVYMESCG*VQAPWFSPPLI Trigger: GATGAGAGGTGGAGAAAACCAAGGGGCTTGTACTCACCCACAAGACTCCATGTAGACTTTATAGGCATATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTAGCCAGATCTCCCATTaGGAAGGTTTAGTTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLSQISH*EGLVPS Trigger: AGATGGAACTAAACCTTCCAAATGGGAGATCTGGCT...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTAGCCATCCACACTGCTGGCTGCAGGAGGGGACAGACCCGAGAGGCACTGAGCAGATGCCACGTTTaGGGCCACGGGAGGGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GLAIHTAGCRRGQTREALSRCHV*GHGRAY Trigger: GTAAGCCCTCCCGTGGCCGCAAACGTGGCATCTGCT...CAGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATGGCTAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCACAGCCCAGAGGGCTaGGGGGACACATGGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDHSPEG*GDTWTE Trigger: CTCTGTCCATGTGTCCCCCCAGCCCTCTGGGCTGTG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | CTCTCATCCTCCTCCACAGAGGCTGCCGGGCCAGCTTaGAGTCTAGTGAAATCAAGGGCCGAAGCCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSSSTEAAGPA*SLVKSRAEATR Trigger: GCGCGTGGCTTCGGCCCTTGATTTCACTAGACTCAAAGCTGGCCCGGCAGCCTCTGTGGAGGAGGATGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR GCA 90 bp | CATCCACACTGCTGGCTGCAGGAGGGGACAGACCCGAGAGGCACTGACACACCTGGGTCAGCTTCTTTCTaGGGTCCTTCTTCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HPHCWLQEGTDPRGTDTPGSASF*GPSSQP Trigger: AGGCTGTGAAGAAGGACCGCAGAAAGAAGCTGACCC...AGGTGTGTCAGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACTGGGCCGGAAGACCTTaGGGGAGTAGGTCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDWAGRP*GSRSLQ Trigger: CTGAAGAGACCTACTCCCCCAAGGTCTTCCGGCCCA...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR TCA 90 bp | GTCATGGTGGGGAGTGTCTCCTTAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTCGTAGCTCTTTTCGTTaGGGCAAACCCCGCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VMVGSVSLALARDSEVLSRSSFR*GKPRGR Trigger: ACGGCCGCGGGGTTTGCCTCAACGAAAAGAGCTACG...ACTGAGGACCTCGGAATCTCTAGCAAGGGCTAAGGAGACACTCCCCACCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR GCA 90 bp | GTCATGGTGGGGAGTGTCTCCTTAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTCCTTCAGCTCGGAAATaGGAGTGTGCTTGGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: VMVGSVSLALARDSEVLSPSARK*ECAWAG Trigger: TCCGGCCCAAGCACACTCGCATTTCCGAGCTGAAGG...ACTGAGGACCTCGGAATCTCTAGCAAGGGCTAAGGAGACACTCCCCACCATGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCCCACAAACTTGGACTaGGTCAGCTTCTTTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDPTNLD*VSFFLR Trigger: CCGCAGAAAGAAGCTGACCCAGTCCAAGTTTGTGGG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR GCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAGGCTTCTCCTCATCCTaGCGGGGGAGGCAGCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGGFSSS*RGRQRK Trigger: TTTGCGCTGCCTCCCCCGGCAGGATGAGGAGAAGCC...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCTGGCTTTGAACTCCTaGAGGGAAGCTTCCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDLALNS*REASMC Trigger: ACACATGGAAGCTTCCCTCCAGGAGTTCAAAGCCAG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | TCTACCTTCCTTTTCCCCATCCAGAGAGACTTGGAGAGGAGGCCAGAGTCTGTGCTTTGCGGTCACAGTTaGGCAGGTACACAGCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: STFLFPIQRDLERRPESVLCGHS*AGTQHG Trigger: CCCGTGCTGTGTACCTGCCCAACTGTGACCGCAAAG...CACAGACTCTGGCCTCCTCTCCAAGTCTCTCTGGATGGGGAAAAGGAAGGTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | AAATGGGGTGACCTGGGCTATGCACTTGATGCACCCTaGGGTGCTGGCAGTTACCTGGCTTGGTGGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KWGDLGYALDAP*GAGSYLAWWIH Trigger: GTGAATCCACCAAGCCAGGTAACTGCCAGCACCCAAGGGTGCATCAAGTGCATAGCCCAGGTCACCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | GTCGACGCACGTCAGTTTCTTTGCTCTCCCTTTGTGTaGCTCCATGTTCCGGGTTGGAGGGGGCCTCTACTA | + |
|
Preference number: 4 (lower is better) Translates to: VDARQFLCSPFV*LHVPGWRGPLL Trigger: TAGTAGAGGCCCCCTCCAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGAAACTGACGTGCGTCGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | TATGAGTCGACGCACGTCAGTTTCTTTGCTCTCCCTTaGTGTTGCTCCATGTTCCGGGTTGGAGGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YESTHVSFFALP*CCSMFRVGGGL Trigger: GAGGCCCCCTCCAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGAAACTGACGTGCGTCGACTCATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR TCA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCCACAGCCGGGCTCTTTaGCCAGCTCACAGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ENDGEDVTMEISHGRKRVHSRAL*PAHSPE Trigger: CTCTGGGCTGTGAGCTGGTCAAAGAGCCCGGCTGTG...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | GTACCCCAGTATCCACTTGGCAAATCTCAGTCAGATGACTGCTCAAGATGCGGAACGGGGCACCATGCGTaGGCTGGCTTTGAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPQYPLGKSQSDDCSRCGTGHHA*AGFELL Trigger: CAGGAGTTCAAAGCCAGCCCACGCATGGTGCCCCGT...TCCGCATCTTGAGCAGTCATCTGACTGAGATTTGCCAAGTGGATACTGGGGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | TCTTTGCTCTCCCTTTGTGTTGCTCCATGTTCCGGGTaGGAGGGGGCCTCTACTATGCCATGCCATCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLCVAPCSG*EGASTMPCHQE Trigger: CTCTTGATGGCATGGCATAGTAGAGGCCCCCTCCAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR GCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGACCACACACCAGCAGATaGCACGTTTGCGGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRPHTSR*HVCGHG Trigger: CCCGTGGCCGCAAACGTGGCATCTGCTGGTGTGTGG...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | AGTCTACATGGAGTCTTGTGGGTGAGTACAAGCCCCTaGGTTTTCTCCACCTCTCATCCTCCTCCACAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLHGVLWVSTSP*VFSTSHPPPQR Trigger: CCTCTGTGGAGGAGGATGAGAGGTGGAGAAAACCAAGGGGCTTGTACTCACCCACAAGACTCCATGTAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | CACCCATGTCCTATGAGTCGACGCACGTCAGTTTCTTaGCTCTCCCTTTGTGTTGCTCCATGTTCCGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPCPMSRRTSVS*LSLCVAPCSGL Trigger: CAACCCGGAACATGGAGCAACACAAAGGGAGAGCAAAGAAACTGACGTGCGTCGACTCATAGGACATGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| 3UTR CAA 72 bp | GCTTCTTGCTCAGGGCATGATGGGATCGTTGCAAACTaGCCTTCTCTCTCCCTAACCTGGAGAAGGACATCC | + |
|
Preference number: 4 (lower is better) Translates to: ASCSGHDGIVAN*PSLSLTWRRTS Trigger: GGATGTCCTTCTCCAGGTTAGGGAGAGAGAAGGCAAGTTTGCAACGATCCCATCATGCCCTGAGCAAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
||
| CDS-3UTR CCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAGGGATGACTCTGGGGTaGGCAGTGTTCTCTGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRGMTLG*AVFSAP Trigger: GGGTGCAGAGAACACTGCCCACCCCAGAGTCATCCC...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR GCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAAAGCTTCCATGTGTCTaGGGCAGGGGCCTTGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRKLPCV*GRGLVR Trigger: CCGAACAAGGCCCCTGCCGCAGACACATGGAAGCTT...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | GAAATCAAGGGCCGAAGCCACGCGCTTCTGAATTGCTaGTCACCCTGGAGAATCAAGTCTTTCCAGTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: EIKGRSHALLNC*SPWRIKSFQCW Trigger: CCAACACTGGAAAGACTTGATTCTCCAGGGTGACAAGCAATTCAGAAGCGCGTGGCTTCGGCCCTTGATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | TCAGTTCCTCCTTGGGGGCCTGAAGTTGAACTGAAGTaGTGCTGTCTTTCCAAGGCATCCTCTTCACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SVPPWGPEVELK*CCLSKASSSPF Trigger: GAAGGGTGAAGAGGATGCCTTGGAAAGACAGCACAACTTCAGTTCAACTTCAGGCCCCCAAGGAGGAACTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | GGGCTTTCTACCATCCTCCATCACAGGGAAGGATGTTaGAGTCGGGCAGAGGAGACTCATGAAGCACTTGAA | + |
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Preference number: 4 (lower is better) Translates to: GLSTILHHREGC*SRAEETHEALE Trigger: TTCAAGTGCTTCATGAGTCTCCTCTGCCCGACTCAAACATCCTTCCCTGTGATGGAGGATGGTAGAAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | TCTCTCCCTAACCTGGAGAAGGACATCCCTCTTCTCTaGATGACCCCATCCATGTCCATGGTCTCTGTATCC | + |
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Preference number: 4 (lower is better) Translates to: SLPNLEKDIPLL*MTPSMSMVSVS Trigger: GGATACAGAGACCATGGACATGGATGGGGTCATCAAGAGAAGAGGGATGTCCTTCTCCAGGTTAGGGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR GCA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGATCGGAAATGCGAGTGTaGTTGGGCCGGAAGACCTTG | + |
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Preference number: 4 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRSEMRV*LGRKTL Trigger: CAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGA...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR GCA 90 bp | AAGATGCGGAGAAATAATGGCAGAAAGGAGAGACTTAGGTCTAGGATACTGGCCCATCCACGTACTCCATaGCCGGCAGCTTCATTCCGT | + |
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Preference number: 4 (lower is better) Translates to: KMRRNNGRKERLRSRILAHPRTP*PAASFR Trigger: ACGGAATGAAGCTGCCGGGCATGGAGTACGTGGATG...GGCCAGTATCCTAGACCTAAGTCTCTCCTTTCTGCCATTATTTCTCCGCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | GAAGAGAGCTATCTTTCCACTGCTCGAGTGAGGCATTaGTCAAAAAGGGGTGGGAAGAAACCTTCCACGGGA | + |
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Preference number: 4 (lower is better) Translates to: EESYLSTARVRH*SKRGGKKPSTG Trigger: TCCCGTGGAAGGTTTCTTCCCACCCCTTTTTGACAAATGCCTCACTCGAGCAGTGGAAAGATAGCTCTCTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | AAACAACCGGTAGGCGTCTCGGAATCTGAAGGAGTCTaGTCTGAACTGTACTATCCGTGTGACAGGCTACTG | + |
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Preference number: 4 (lower is better) Translates to: KQPVGVSESEGV*SELYYPCDRLL Trigger: CAGTAGCCTGTCACACGGATAGTACAGTTCAGACAAGACTCCTTCAGATTCCGAGACGCCTACCGGTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | CGAGAGGCACTGACACACCTTGTTTCTTTTCTCCCCTaGACCAATCTAAACTGGGTGTCACTGAATGCCACA | + |
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Preference number: 4 (lower is better) Translates to: REALTHLVSFLP*TNLNWVSLNAT Trigger: TGTGGCATTCAGTGACACCCAGTTTAGATTGGTCAAGGGGAGAAAAGAAACAAGGTGTGTCAGTGCCTCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR GCA 90 bp | AGAGGTCGACGAGACCTCTTTCCCTTCTACTGTGTTTTAAATCATAGCCTTCTTCTGTCTCATCTCAGGTaGAGGGATGACTCTGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RGRRDLFPFYCVLNHSLLLSHLR*RDDSGV Trigger: CACCCCAGAGTCATCCCTGCACCTGAGATGAGACAG...AAGAAGGCTATGATTTAAAACACAGTAGAAGGGAAAGAGGTCTCGTCGACCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | CTGTTTAGGCCTGGCCGTCAGAGAAACGTAGAGTCTTaGTCAGAGGAACGTAGAGTCTTTTATTCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LFRPGRQRNVES*SEERRVFYSPG Trigger: ACCTGGAGAATAAAAGACTCTACGTTCCTCTGACAAAGACTCTACGTTTCTCTGACGGCCAGGCCTAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| 3UTR CAA 72 bp | TCAAAGACAGTCCTGAGCCTTTTGTTAAGCACCTCTTaGTTGAAGAAGCCAGTGGGCAATGAGATGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SKTVLSLLLSTS*LKKPVGNEMLL Trigger: GAGAAGCATCTCATTGCCCACTGGCTTCTTCAACAAAGAGGTGCTTAACAAAAGGCTCAGGACTGTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | CATCCACACTGCTGGCTGCAGGAGGGGACAGACCCGAGAGGCACTGACACACCTGAAATGCGAGTGTGCTaGGGCCGGAAGACCTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HPHCWLQEGTDPRGTDTPEMRVC*GRKTLG Trigger: CCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTC...AGGTGTGTCAGTGCCTCTCGGGTCTGTCCCCTCCTGCAGCCAGCAGTGTGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCCACAGCCGGGCTCTTaGACCAGCTCACAGCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDPQPGS*TSSQPR Trigger: TCTGGGCTGTGAGCTGGTCAAAGAGCCCGGCTGTGG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | ACAGGCTACTGTGTGACAGTGATGGTGTCGGAGATGGGGGCTGAAGCCGGTGACCAGCAGATGCCACGTTaGCGGCCACGGGAGGGCTTA | + |
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Preference number: 5 (lower is better) Translates to: TGYCVTVMVSEMGAEAGDQQMPR*RPREGL Trigger: TAAGCCCTCCCGTGGCCGCAAACGTGGCATCTGCTG...GTCACCGGCTTCAGCCCCCATCTCCGACACCATCACTGTCACACAGTAGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 90 bp | CAGCCTTCAGCTCGGAAATGCGAGTGTGCTTGGGCCGGAAGACCTTaGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTGGTGGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: QPSARKCECAWAGRP*GSRSLQPSRRWWVP Trigger: AGGAACCCACCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGAGCTGAAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 90 bp | TTTGCGGTCACAGTTGGGCAGGTACACAGCACGGGGCACCATGCGTaGGCTGGCTTTGAACTCCTGGAGGGAAGCTTCCATGTGTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: FAVTVGQVHSTGHHA*AGFELLEGSFHVSA Trigger: CGCAGACACATGGAAGCTTCCCTCCAGGAGTTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAACTGTGACCGCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 90 bp | CCTTCTTCACAGCCTCAGCCTTCAGCTCGGAAATGCGAGTGTGCTTaGGCCGGAAGACCTTGGGGGAGTAGGTCTCTTCAGCCATCTCGG | + |
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Preference number: 5 (lower is better) Translates to: PSSQPQPSARKCECA*AGRPWGSRSLQPSR Trigger: CCGAGATGGCTGAAGAGACCTACTCCCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGAGCTGAAGGCTGAGGCTGTGAAGAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 90 bp | CCATGCCCGGCAGCTTCATTCCGTACTTGTCCACACACCAGCAGATaGCACGTTTGCGGCCACGGGAGGGCTTACACTGCTTTCTCTTGT | + |
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Preference number: 5 (lower is better) Translates to: PCPAASFRTCPHTSR*HVCGHGRAYTAFSC Trigger: ACAAGAGAAAGCAGTGTAAGCCCTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGTGTGGACAAGTACGGAATGAAGCTGCCGGGCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 90 bp | TGCTGTCGAAGGCGTGGCACTGAAAGTCCCCATCCACGTACTCCATaGCCGGCAGCTTCATTCCGTACTTGTCCACACACCAGCAGATGC | + |
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Preference number: 5 (lower is better) Translates to: CCRRRGTESPHPRTP*PAASFRTCPHTSRC Trigger: GCATCTGCTGGTGTGTGGACAAGTACGGAATGAAGCTGCCGGGCATGGAGTACGTGGATGGGGACTTTCAGTGCCACGCCTTCGACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 90 bp | TCTTTCTGCGGTCCTTCTTCACAGCCTCAGCCTTCAGCTCGGAAATaGGAGTGTGCTTGGGCCGGAAGACCTTGGGGGAGTAGGTCTCTT | + |
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Preference number: 5 (lower is better) Translates to: SFCGPSSQPQPSARK*ECAWAGRPWGSRSL Trigger: AAGAGACCTACTCCCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGAGCTGAAGGCTGAGGCTGTGAAGAAGGACCGCAGAAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 90 bp | GCCGGAAGACCTTGGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTaGTGGGTTCCTCGTGTTCCCGAGAGTCTCTCTCTATCTTGGTTT | + |
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Preference number: 5 (lower is better) Translates to: AGRPWGSRSLQPSRR*WVPRVPESLSLSWF Trigger: AAACCAAGATAGAGAGAGACTCTCGGGAACACGAGGAACCCACCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCAAGGTCTTCCGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 90 bp | GGAAGACCTTGGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTGGTaGGTTCCTCGTGTTCCCGAGAGTCTCTCTCTATCTTGGTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GRPWGSRSLQPSRRW*VPRVPESLSLSWFA Trigger: AGCAAACCAAGATAGAGAGAGACTCTCGGGAACACGAGGAACCCACCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCAAGGTCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | GTCATGGTGGGGAGTGTCTCCTTAGCCCTTGCTAGAGATTCCGAGGTCCTCAGTTCTCTCTATCTTGGTTaGCTCGCCGTAGCTCTTTTC | + |
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Preference number: 5 (lower is better) Translates to: VMVGSVSLALARDSEVLSSLYLG*LAVALF Trigger: GAAAAGAGCTACGGCGAGCAAACCAAGATAGAGAGA...ACTGAGGACCTCGGAATCTCTAGCAAGGGCTAAGGAGACACTCCCCACCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | GAGAATGATGGTGAGGATGTTACCATGGAGATAAGTCATGGTCGGAAGAGGGTCATGCGTGGGCTGGCTTaGAACTCCTGGAGGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: ENDGEDVTMEISHGRKRVMRGLA*NSWREA Trigger: AGCTTCCCTCCAGGAGTTCAAAGCCAGCCCACGCAT...GACCCTCTTCCGACCATGACTTATCTCCATGGTAACATCCTCACCATCATTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS-3UTR CAA 90 bp | GAACGTAGAGTCTTTTATTCTCCAGGTTCCCTGCTTTGTTCTGGCTGGTCAAGAAGCTTCATTCCGTACTaGTCCACACACCAGCAGATG | + |
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Preference number: 5 (lower is better) Translates to: ERRVFYSPGSLLCSGWSRSFIPY*STHQQM Trigger: CATCTGCTGGTGTGTGGACAAGTACGGAATGAAGCT...TCTTGACCAGCCAGAACAAAGCAGGGAACCTGGAGAATAAAAGACTCTACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 72 bp | GCTCGGAAATGCGAGTGTGCTTGGGCCGGAAGACCTTaGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ARKCECAWAGRP*GSRSLQPSRRW Trigger: CCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CAA 72 bp | AGGTACACAGCACGGGGCACCATGCGTGGGCTGGCTTaGAACTCCTGGAGGGAAGCTTCCATGTGTCTGCGG | + |
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Preference number: 6 (lower is better) Translates to: RYTARGTMRGLA*NSWREASMCLR Trigger: CCGCAGACACATGGAAGCTTCCCTCCAGGAGTTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS TCA 72 bp | TCTCTATCTTGGTTTGCTCGCCGTAGCTCTTTTCGTTaGGGCAAACCCCGCGGCCGTGCAGCAGGGCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SLSWFARRSSFR*GKPRGRAAGRA Trigger: TGCACGCCCTGCTGCACGGCCGCGGGGTTTGCCTCAACGAAAAGAGCTACGGCGAGCAAACCAAGATAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 72 bp | GGTCCTTCTTCACAGCCTCAGCCTTCAGCTCGGAAATaGGAGTGTGCTTGGGCCGGAAGACCTTGGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: GPSSQPQPSARK*ECAWAGRPWGS Trigger: ACTCCCCCAAGGTCTTCCGGCCCAAGCACACTCGCATTTCCGAGCTGAAGGCTGAGGCTGTGAAGAAGGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 72 bp | ACAGTTGGGCAGGTACACAGCACGGGGCACCATGCGTaGGCTGGCTTTGAACTCCTGGAGGGAAGCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: TVGQVHSTGHHA*AGFELLEGSFH Trigger: ATGGAAGCTTCCCTCCAGGAGTTCAAAGCCAGCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAACTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 72 bp | GCAGCTTCATTCCGTACTTGTCCACACACCAGCAGATaGCACGTTTGCGGCCACGGGAGGGCTTACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AASFRTCPHTSR*HVCGHGRAYTA Trigger: AGCAGTGTAAGCCCTCCCGTGGCCGCAAACGTGGCATCTGCTGGTGTGTGGACAAGTACGGAATGAAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS GCA 72 bp | AGGCGTGGCACTGAAAGTCCCCATCCACGTACTCCATaGCCGGCAGCTTCATTCCGTACTTGTCCACACACC | + |
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Preference number: 6 (lower is better) Translates to: RRGTESPHPRTP*PAASFRTCPHT Trigger: GGTGTGTGGACAAGTACGGAATGAAGCTGCCGGGCATGGAGTACGTGGATGGGGACTTTCAGTGCCACGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 72 bp | CCTTGGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTaGTGGGTTCCTCGTGTTCCCGAGAGTCTCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PWGSRSLQPSRR*WVPRVPESLSL Trigger: TAGAGAGAGACTCTCGGGAACACGAGGAACCCACCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 72 bp | TGGGGGAGTAGGTCTCTTCAGCCATCTCGGAGGTGGTaGGTTCCTCGTGTTCCCGAGAGTCTCTCTCTATCT | + |
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Preference number: 6 (lower is better) Translates to: WGSRSLQPSRRW*VPRVPESLSLS Trigger: AGATAGAGAGAGACTCTCGGGAACACGAGGAACCCACCACCTCCGAGATGGCTGAAGAGACCTACTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CCA 72 bp | ACTGCTTTCTCTTGTAGAATCCTTTGCGGTCACAGTTaGGCAGGTACACAGCACGGGGCACCATGCGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TAFSCRILCGHS*AGTQHGAPCVG Trigger: GCCCACGCATGGTGCCCCGTGCTGTGTACCTGCCCAACTGTGACCGCAAAGGATTCTACAAGAGAAAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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| CDS CAA 72 bp | TTCCTCGTGTTCCCGAGAGTCTCTCTCTATCTTGGTTaGCTCGCCGTAGCTCTTTTCGTTGAGGCAAACCCC | + |
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Preference number: 6 (lower is better) Translates to: FLVFPRVSLYLG*LAVALFVEANP Trigger: GGGGTTTGCCTCAACGAAAAGAGCTACGGCGAGCAAACCAAGATAGAGAGAGACTCTCGGGAACACGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027377.9 |
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