Pregenerated sensors for IGFBP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017493Ensembl transcript IDs: ENSMUST00000017637.13, ENSMUST00000140772.2, ENSMUST00000177092.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGGAGAGGGAGAGGAGAGGGAGAGAGCACCAGTGAGCACCAGGTaGCACATGCACACACGCCCACCCGTGTGGAAGCAGAAGCCATGG | + |
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Preference number: 1 (lower is better) Translates to: EGEGEERERAPVSTR*HMHTRPPVWKQKPW Trigger: CCATGGCTTCTGCTTCCACACGGGTGGGCGTGTGTGCATGTGTCACCTGGTGCTCACTGGTGCTCTCTCCCTCTCCTCTCCCTCTCCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 90 bp | AGAAGAGACAGGAAGGAGAGGGAGAGGAGAGGGAGAGAGCACCAGTaGGCACCAGGTGACACATGCACACACGCCCACCCGTGTGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: RRDRKERERRGREHQ*APGDTCTHAHPCGS Trigger: GCTTCCACACGGGTGGGCGTGTGTGCATGTGTCACCTGGTGCTCACTGGTGCTCTCTCCCTCTCCTCTCCCTCTCCTTCCTGTCTCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 90 bp | GAATACCCTGACCAAAGATGGGCCCTGTCCCTCAAGCTTGTGCCCTaGAGGCCCCAAGGAGAGAGCTCTACGCAGCAGCACAGAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: EYPDQRWALSLKLVP*RPQGESSTQQHRAE Trigger: CTCTGCTCTGTGCTGCTGCGTAGAGCTCTCTCCTTGGGGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 90 bp | CTACCTGCAAGGCATTGTCGGATGACCGAATACCCTGACCAAAGATaGGCCCTGTCCCTCAAGCTTGTGCCCTGGAGGCCCCAAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LPARHCRMTEYPDQR*ALSLKLVPWRPQGE Trigger: CTCTCCTTGGGGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTTGCAGGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 90 bp | CAGCAGAGATCTACCTGCAAGGCATTGTCGGATGACCGAATACCCTaGCCAAAGATGGGCCCTGTCCCTCAAGCTTGTGCCCTGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: QQRSTCKALSDDRIP*PKMGPVPQACALEA Trigger: GGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTTGCAGGTAGATCTCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 90 bp | AGTCAAAGGTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTTGGTaGACGCCCATCCCCCAGTCAAGAACAGAAACACTGGCGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: SQRFSSNQALRIQRW*TPIPQSRTETLALW Trigger: CCACAGCGCCAGTGTTTCTGTTCTTGACTGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAACCTTTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 90 bp | CATTCCTTTCCCACAGCAGAGATCTACCTGCAAGGCATTGTCGGATaGCCGAATACCCTGACCAAAGATGGGCCCTGTCCCTCAAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: HSFPTAEIYLQGIVG*PNTLTKDGPCPSSL Trigger: CAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTTGCAGGTAGATCTCTGCTGTGGGAAAGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 90 bp | AAAAACAGGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTaGTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: KNRGWRDGSAVKSTD*SSRGPEFKSQQPHG Trigger: ACCATGTGGTTGCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTCCAGCCCCTGTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 90 bp | GAAGCAGGGGTTCGAAGGTGTGCCTTAGGGAAAGAAATATGCCCTTaGCCAAGAAACCCGAAAGTTAATCTTGAGGCTACACCACCCCAC | + |
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Preference number: 1 (lower is better) Translates to: EAGVRRCALGKEICP*PRNPKVNLEATPPH Trigger: GTGGGGTGGTGTAGCCTCAAGATTAACTTTCGGGTTTCTTGGCCAAGGGCATATTTCTTTCCCTAAGGCACACCTTCGAACCCCTGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 90 bp | TCCTCAAGGGGCAAGAGACTCAATACAGAGTCTCTAGGCCACTTTTaGCCTCCAGGGAGAGACTTTCATCTGATATTATCAGCACACACA | + |
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Preference number: 1 (lower is better) Translates to: SSRGKRLNTESLGHF*PPGRDFHLILSAHT Trigger: TGTGTGTGCTGATAATATCAGATGAAAGTCTCTCCCTGGAGGTCAAAAGTGGCCTAGAGACTCTGTATTGAGTCTCTTGCCCCTTGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 90 bp | TCACATTCTACAATCGGAGGAAATCACAACGAGGCTTCCCGGCGCTaGAAACTAAAGCTGGCACATAGTATGTTTTCAATACGTGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SHSTIGGNHNEASRR*KLKLAHSMFSIRVF Trigger: GAAAACACGTATTGAAAACATACTATGTGCCAGCTTTAGTTTTCAGCGCCGGGAAGCCTCGTTGTGATTTCCTCCGATTGTAGAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCTAGTAGGGGGCACTaGGTCCCCCACCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GQRQTARTQTPSQVNSTTPSRGH*VPHLLA Trigger: TGCCAGCAGGTGGGGGACTCAGTGCCCCCTACTAGG...GGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCCTAGTAGGGGGCACTaGGTCCCCCACCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARGRQPGLRLQARSTLQPPSRGH*VPHLLA Trigger: TGCCAGCAGGTGGGGGACTCAGTGCCCCCTACTAGG...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGCTGCCGCACGAGGCTTCCTTGTCCCTCAAGCTTGTaGCCTGGAGGCCCCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ALLCPRFRSQCRCRTRLPCPSSL*PGGPKE Trigger: CTCCTTGGGGCCTCCAGGGCACAAGCTTGAGGGACA...AGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAATCGGGGACACAGCAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | AACTCTAGGCTGTGCCCCAGCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGAATGGGACTGCAGGCTaGGGTAGGGGGTGGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: NSRLCPSSAVSPIQKPMPNGTAG*GRGWGP Trigger: AGGACCCCACCCCCTACCCCAGCCTGCAGTCCCATT...CGGCATTGGCTTCTGAATCGGGGACACAGCAGAGCTGGGGCACAGCCTAGAGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCCCTAGTAGGGGGCACTaGGTCCCCCACCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRLRALTALPEVLSSNPSPSRGH*VPHLLA Trigger: TGCCAGCAGGTGGGGGACTCAGTGCCCCCTACTAGG...GCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | CAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCCCGTGGGCCTTGAGTTaGGAACACCTCGTCACATTC | + |
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Preference number: 2 (lower is better) Translates to: QRLRALTALPEVLSSNPSPWALS*EHLVTF Trigger: GAATGTGACGAGGTGTTCTCAACTCAAGGCCCACGG...GCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCTACCTCAACATGCCTTaGCCTGGGCCCCAAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QRLRALTALPEVLSSNPSYLNMP*PGPQKE Trigger: CTCCTTTTGGGGCCCAGGCCAAGGCATGTTGAGGTA...GCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | CTGGCCAAGATGGAGAGGGAGGGCGTTCAATGTTCACCACTTTCTTTCTCTCTCTTCTCCCGTGGGCCTTaGGTTGAGAACACCTCGTCA | + |
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Preference number: 2 (lower is better) Translates to: LAKMEREGVQCSPLSFSLFSRGP*VENTSS Trigger: TGACGAGGTGTTCTCAACTCAAGGCCCACGGGAGAA...GAGAGAGAAAGAAAGTGGTGAACATTGAACGCCCTCCCTCTCCATCTTGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | ACACATGCACACACGCCCACCCGTGTGGAAGCAGAAGCCATGGAAACGTGTCTACTCTCACTCCAAGAATaGGGTTTCTCTTCTCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: THAHTPTRVEAEAMETCLLSLQE*GFSSPV Trigger: CACGGGAGAAGAGAAACCTCATTCTTGGAGTGAGAG...TAGACACGTTTCCATGGCTTCTGCTTCCACACGGGTGGGCGTGTGTGCATGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | CTTTTGACCTCCAGGGAGAGACTTTCATCTGATATTATCAGCACACACACACACGGCTGGGGTAGGGGGTaGGGTCCTCAGAGAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: LLTSRERLSSDIISTHTHGWGRG*GPQRAL Trigger: GAGTGCTCTCTGAGGACCCCACCCCCTACCCCAGCC...GTGTGTGTGTGTGCTGATAATATCAGATGAAAGTCTCTCCCTGGAGGTCAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | TGTAGGGCACATCCTATAAACACACACACACGAGCATGTGCACGCGTGTGCACACACAAAGGGAAATTTTaGGCAGGGCCAGAGGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: CRAHPINTHTRACARVCTHKGKF*AGPEAD Trigger: GTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTG...TGTGCACACGCGTGCACATGCTCGTGTGTGTGTGTTTATAGGATGTGCCCTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| 3UTR CAA 90 bp | TTAAAGTCAAAGGTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTaGGTGCACGCCCATCCCCCAGTCAAGAACAGAAACACTGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: LKSKVLIQPGSQNSA*VHAHPPVKNRNTGA Trigger: AGCGCCAGTGTTTCTGTTCTTGACTGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAACCTTTGACTTTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | CCAATAACCACAAATAGGGACCAGAATGGGGCCATTCCTCAGACACACACAATCGATGACCGAATACCCTaGCCAAAGATGGGCCCTGTC | + |
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Preference number: 2 (lower is better) Translates to: PITTNRDQNGAIPQTHTIDDRIP*PKMGPV Trigger: GACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATC...GATTGTGTGTGTCTGAGGAATGGCCCCATTCTGGTCCCTATTTGTGGTTATTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | GGGACAAGCCACTATTCCTCAAGGGGCAAGAGACTCAATACAGAGTCTCTAGGCAGGCAAAGCCACAGGTaGTGGGCAACTAGAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: GTSHYSSRGKRLNTESLGRQSHR*WATRKI Trigger: TATCTTTCTAGTTGCCCACCACCTGTGGCTTTGCCT...GCCTAGAGACTCTGTATTGAGTCTCTTGCCCCTTGAGGAATAGTGGCTTGTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR TCA 90 bp | AAAGGTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTTGGTGCACGCCCATCCAATTCCATAGTGATTTaGAAGCACACTGGGAATTCC | + |
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Preference number: 2 (lower is better) Translates to: KGSHPTRLSEFSVGARPSNSIVI*KHTGNS Trigger: GGAATTCCCAGTGTGCTTTCAAATCACTATGGAATT...GGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAACCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CCA 90 bp | AGATGGAGAGGGAGGGCGTTCAATGTTCACCACTTTCTTTCTCTCTCACTCCAATACACTCAGACCTCTTaGGGGTATCTAAGCCCATCA | + |
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Preference number: 2 (lower is better) Translates to: RWRGRAFNVHHFLSLSLQYTQTS*GYLSPS Trigger: TGATGGGCTTAGATACCCCCAAGAGGTCTGAGTGTA...TTGGAGTGAGAGAGAAAGAAAGTGGTGAACATTGAACGCCCTCCCTCTCCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CAA 90 bp | TTCCTCAAGGGGCAAGAGACTCAATACAGAGTCTCTAGGCCACTTTaGACCTCCAGGGAGAGACTTTCATCTGATATTATCAGCACACAC | + |
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Preference number: 2 (lower is better) Translates to: FLKGQETQYRVSRPL*TSRERLSSDIISTH Trigger: GTGTGTGCTGATAATATCAGATGAAAGTCTCTCCCTGGAGGTCAAAAGTGGCCTAGAGACTCTGTATTGAGTCTCTTGCCCCTTGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | ACCCTGACCAAAGATGGGCCCTGTCCCTCAAGCTTGTaGCCTGGAGGCCCCAAGGAGAGAGCTCTACGCAGC | + |
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Preference number: 3 (lower is better) Translates to: TLTKDGPCPSSL*PGGPKERALRS Trigger: GCTGCGTAGAGCTCTCTCCTTGGGGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | GCCCCAGCTCTGCTGTGTCCCCGATTCAGAAGCCAATaGCGCTGCCGCACGAGGCTTCCTTGGCCTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: APALLCPRFRSQ*RCRTRLPWPPK Trigger: TTTTGGAGGCCAAGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAATCGGGGACACAGCAGAGCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | GACCAAAGATGGGCCCTGTCCCTCAAGCTTGTGCCCTaGAGGCCCCAAGGAGAGAGCTCTACGCAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: DQRWALSLKLVP*RPQGESSTQQH Trigger: GTGCTGCTGCGTAGAGCTCTCTCCTTGGGGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | TTCAGAAGCCAATGCCGCTGCCGCACGAGGCTTCCTTaGCCTCCAAAACCACAGGACCCCACTCCACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: FRSQCRCRTRLP*PPKPQDPTPLG Trigger: CCCCAGTGGAGTGGGGTCCTGTGGTTTTGGAGGCCAAGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | GCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGCTaGCGCACGAGGCTTCCTTGGCCTCCAAAACCACAG | + |
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Preference number: 3 (lower is better) Translates to: ALLCPRFRSQCR*RTRLPWPPKPQ Trigger: CTGTGGTTTTGGAGGCCAAGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAATCGGGGACACAGCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | AGGCATTGTCGGATGACCGAATACCCTGACCAAAGATaGGCCCTGTCCCTCAAGCTTGTGCCCTGGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: RHCRMTEYPDQR*ALSLKLVPWRP Trigger: GGGCCTCCAGGGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR-3UTR CAA 90 bp | AACTCTAGGCTGTGCCCCAGCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGACACAAAGGGAAATTTaGGGCAGGGCCAGAGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: NSRLCPSSAVSPIQKPMPTQREI*GRARGR Trigger: TCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGT...CGGCATTGGCTTCTGAATCGGGGACACAGCAGAGCTGGGGCACAGCCTAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | CCCACAGCAGAGATCTACCTGCAAGGCATTGTCGGATaGCCGAATACCCTGACCAAAGATGGGCCCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: PTAEIYLQGIVG*PNTLTKDGPCP Trigger: GGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTTGCAGGTAGATCTCTGCTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | TCTACCTGCAAGGCATTGTCGGATGACCGAATACCCTaGCCAAAGATGGGCCCTGTCCCTCAAGCTTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: STCKALSDDRIP*PKMGPVPQACA Trigger: GGCACAAGCTTGAGGGACAGGGCCCATCTTTGGTCAGGGTATTCGGTCATCCGACAATGCCTTGCAGGTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | AGATGGCGGGATAGGAGGTATAAGGGTAGGGAAATATaGGGACGGAGGCAAAGCCACAGGTGGTGGGCAACT | + |
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Preference number: 3 (lower is better) Translates to: RWRDRRYKGREI*GRRQSHRWWAT Trigger: AGTTGCCCACCACCTGTGGCTTTGCCTCCGTCCCCATATTTCCCTACCCTTATACCTCCTATCCCGCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | GTAAGGAAGTTGGAAGCTAGTGAAGTCAGGAGCCTGTaGGTCTCTGGATCAGGGAGGGGACTGGAGGACAAG | + |
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Preference number: 3 (lower is better) Translates to: VRKLEASEVRSL*VSGSGRGLEDK Trigger: CTTGTCCTCCAGTCCCCTCCCTGATCCAGAGACTCACAGGCTCCTGACTTCACTAGCTTCCAACTTCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | GTCCTCAGAGAGCACTCAGGGAGAGGGCTTTTGGTTTaGAGCAGTCCCTCACCAAGCAGAAATGTCTCACCT | + |
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Preference number: 3 (lower is better) Translates to: VLREHSGRGLLV*SSPSPSRNVSP Trigger: AGGTGAGACATTTCTGCTTGGTGAGGGACTGCTGCAAACCAAAAGCCCTCTCCCTGAGTGCTCTCTGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | TACACTCAGACCTCTTGGGGGTATCTAAGCCCATCATaGGCACGAGAAGGCTCAGGCTTATCCTGTAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: YTQTSWGYLSPS*AREGSGLSCRA Trigger: TGCCCTACAGGATAAGCCTGAGCCTTCTCGTGCCCATGATGGGCTTAGATACCCCCAAGAGGTCTGAGTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | TTCTCATCCAACCAGGCTCTCAGAATTCAGCGTTGGTaGACGCCCATCCCCCAGTCAAGAACAGAAACACTG | + |
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Preference number: 3 (lower is better) Translates to: FSSNQALRIQRW*TPIPQSRTETL Trigger: CAGTGTTTCTGTTCTTGACTGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CCA 72 bp | AGGTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTTaGTGCACGCCCATCCCCCAGTCAAGAACAGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RFSSNQALRIQR*CTPIPQSRTET Trigger: TGTTTCTGTTCTTGACTGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | ACCCGTGTGGAAGCAGAAGCCATGGAAACGTGTCTATaGATCCAACAAGTCCCAAAGTGCAGGCTGACACTG | + |
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Preference number: 3 (lower is better) Translates to: TRVEAEAMETCL*IQQVPKCRLTL Trigger: CAGTGTCAGCCTGCACTTTGGGACTTGTTGGATTCATAGACACGTTTCCATGGCTTCTGCTTCCACACGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | ACTCCAAGAATGAGGTTTCTCTTCTCCCGTGGGCCTTaGGTTGAGAACACCTCGTCACATTCTACAATCGGA | + |
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Preference number: 3 (lower is better) Translates to: TPRMRFLFSRGP*VENTSSHSTIG Trigger: TCCGATTGTAGAATGTGACGAGGTGTTCTCAACTCAAGGCCCACGGGAGAAGAGAAACCTCATTCTTGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR GCA 72 bp | GCAGGGGTTCGAAGGTGTGCCTTAGGGAAAGAAATATaGCCTTGGCCAAGAAACCCGAAAGTTAATCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: AGVRRCALGKEI*PWPRNPKVNLE Trigger: CTCAAGATTAACTTTCGGGTTTCTTGGCCAAGGGCATATTTCTTTCCCTAAGGCACACCTTCGAACCCCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | AAGAATGAGGTTTCTCTTCTCCCGTGGGCCTTGAGTTaGGAACACCTCGTCACATTCTACAATCGGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: KNEVSLLPWALS*EHLVTFYNRRK Trigger: TTTCCTCCGATTGTAGAATGTGACGAGGTGTTCTCAACTCAAGGCCCACGGGAGAAGAGAAACCTCATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR TCA 72 bp | AATGTTCACCACTTTCTTTCTCTCTCACTCCAAGAATaGGGTTTCTCTTCTCCCGTGGGCCTTGAGTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NVHHFLSLSLQE*GFSSPVGLELR Trigger: TCTCAACTCAAGGCCCACGGGAGAAGAGAAACCTCATTCTTGGAGTGAGAGAGAAAGAAAGTGGTGAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| 3UTR TCA 72 bp | ACAATCGGAGGAAATCACAACGAGGCTTCCCGGCGCTaGAAACTAAAGCTGGCACATAGTATGTTTTCAATA | + |
|
Preference number: 3 (lower is better) Translates to: TIGGNHNEASRR*KLKLAHSMFSI Trigger: TATTGAAAACATACTATGTGCCAGCTTTAGTTTTCAGCGCCGGGAAGCCTCGTTGTGATTTCCTCCGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| 3UTR TCA 72 bp | GGCAAGAGACTCAATACAGAGTCTCTAGGCCACTTTTaGCCTCCAGGGAGAGACTTTCATCTGATATTATCA | + |
|
Preference number: 3 (lower is better) Translates to: GKRLNTESLGHF*PPGRDFHLILS Trigger: TGATAATATCAGATGAAAGTCTCTCCCTGGAGGTCAAAAGTGGCCTAGAGACTCTGTATTGAGTCTCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | GCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGCTGCCGCACGAGGCTTCCTCGCTCCAGGGCCCGGTaGAGCTCGCTCTGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPRFRSQCRCRTRLPRSRAR*SSLWQE Trigger: TTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGAGCG...AGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAATCGGGGACACAGCAGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACCGCTCCAGGGCCCGGTaGAGCTCGCTCTGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AGPEADSQDSDSKPGQLYRSRAR*SSLWQE Trigger: TTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGAGCG...GTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGCTGCCGCACGAGGCTTCCTCTGTCAGCCAGCTGGTaGCAGTCCAGCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLCPRFRSQCRCRTRLPLSASW*QSSSPL Trigger: CAAGGGGGAGCTGGACTGCCACCAGCTGGCTGACAG...AGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAATCGGGGACACAGCAGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAAGCCCAGGGCGCAAGTaGCGCAACAACCGCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QRQTARTQTPSQVNSTTPSPGRK*RNNRSL Trigger: CAGGCTGCGGTTGTTGCGCCACTTGCGCCCTGGGCT...TGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | CGCGTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCGGTGCAGCTCGCTCTaGCAGGAACCCTGGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVCTHTQREILGRARGRQRCSSL*QEPWGT Trigger: TGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCG...CTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACACGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCTGTCAGCCAGCTGGTaGCAGTCCAGCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQPGLRLQARSTLQPLSASW*QSSSPL Trigger: CAAGGGGGAGCTGGACTGCCACCAGCTGGCTGACAG...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCAAGCTGTCAGCCAGCTaGTGGCAGTCCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQRQTARTQTPSQVNSTTKLSAS*WQSSSP Trigger: GGGGGAGCTGGACTGCCACCAGCTGGCTGACAGCTT...GGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCAAGCTGTCAGCCAGCTaGTGGCAGTCCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQPGLRLQARSTLQPKLSAS*WQSSSP Trigger: GGGGGAGCTGGACTGCCACCAGCTGGCTGACAGCTT...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| 3UTR CAA 72 bp | ATTCAGAAGCCAATGCCGCTGCCGCACGAGGCTTCCTaGGCCTCCAAAACCACAGGACCCCACTCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IQKPMPLPHEAS*ASKTTGPHSTG Trigger: CCCAGTGGAGTGGGGTCCTGTGGTTTTGGAGGCCAAGGAAGCCTCGTGCGGCAGCGGCATTGGCTTCTGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR TCA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCTTCTGCAGGCACCTGTaGTCATGGGCACTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQPGLRLQARSTLQPFCRHL*SWALQG Trigger: CCCCTGCAGTGCCCATGATCACAGGTGCCTGCAGAA...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCACACGCCTTGCCCGTaGATCAATGTACGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGRQPGLRLQARSTLQPHTPCP*INVRRG Trigger: GCCCCTGCGTACATTGATGCACGGGCAAGGCGTGTG...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | ACACATGCACACACGCCCACCCGTGTGGAAGCAGAAGCCATGGAAACGTGTCTACTCTGGCAGGAACCCTaGGGCACAGGACGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: THAHTPTRVEAEAMETCLLWQEP*GTGRGS Trigger: GGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAG...TAGACACGTTTCCATGGCTTCTGCTTCCACACGGGTGGGCGTGTGTGCATGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCACTCTGGCAGGAACCCTaGGGCACAGGACGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCTHTQREILGRARGRQPLWQEP*GTGRGS Trigger: GGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAG...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | CGCGTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCTGTCAGCCAGCTGGTaGCAGTCCAGCTCCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVCTHTQREILGRARGRQLSASW*QSSSPL Trigger: CAAGGGGGAGCTGGACTGCCACCAGCTGGCTGACAG...CTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACACGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAGTTCTGCAGGCACCTGTaGTCATGGGCACTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRQPGLRLQARSTLQPQFCRHL*SWALQG Trigger: CCCCTGCAGTGCCCATGATCACAGGTGCCTGCAGAA...CTGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCTCCGTGCACACGCCTTaGCCGTGCATCAATGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: PEADSQDSDSKPGQLYNPSVHTP*PCINVR Trigger: GCGTACATTGATGCACGGGCAAGGCGTGTGCACGGA...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAGTCCAGCTCCCCCTTaGGTTCCAAACCCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PEADSQDSDSKPGQLYNPSPAPP*VPNPQE Trigger: TTCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACT...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAAGTCCAGCTCCCCCTTaGGTTCCAAACCCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQRQTARTQTPSQVNSTSPAPP*VPNPQE Trigger: TTCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACT...TGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCAAAGCTGTCAGCCAGCTaGTGGCAGTCCAGCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: VCTHTQREILGRARGRQPKLSAS*WQSSSP Trigger: GGGGGAGCTGGACTGCCACCAGCTGGCTGACAGCTT...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR TCA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCATTCTGCAGGCACCTGTaGTCATGGGCACTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCTHTQREILGRARGRQPFCRHL*SWALQG Trigger: CCCCTGCAGTGCCCATGATCACAGGTGCCTGCAGAA...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | AACTCTAGGCTGTGCCCCAGCTCTGCTGTGTCCCCGATTCAGAAGCCAATGCCGATGAAGAGGTCTTCGTaGGTACGGCTCTGTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSRLCPSSAVSPIQKPMPMKRSS*VRLCEA Trigger: CGCCTCACAGAGCCGTACCCACGAAGACCTCTTCAT...CGGCATTGGCTTCTGAATCGGGGACACAGCAGAGCTGGGGCACAGCCTAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAGCGGGGTGACACTGTTTaGGGTGGAAGTTGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRQPGLRLQARSTLQPQRGDTV*GGSCRC Trigger: GCAACGGCAACTTCCACCCCAAACAGTGTCACCCCG...CTGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTTGGTGCACGCCCATCCCCCAAGTCCAGCTCCCCCTTaGGTTCCAAACCCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLIQPGSQNSALVHAHPPSPAPP*VPNPQE Trigger: TTCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACT...TGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | CAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGTCCTGAGTTCAAATCCCAGCTTTCCGACAGCTCCGTaGACACGCCTTGCCCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALTALPEVLSSNPSFPTAP*TRLARA Trigger: TGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAA...GCTGGGATTTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCTCCTTGTCAGAGGTCTaGAGGCTTTCCTGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEADSQDSDSKPGQLYNPSLSEV*RLSWMA Trigger: AGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGA...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCGGTGGAAGTTGCCGTTaGGGTCACAGTTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GQRQTARTQTPSQVNSTTGGSCR*GHSLEW Trigger: CCATTCCAAACTGTGACCGCAACGGCAACTTCCACC...GGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAGATCCTTGTTCTTGCTTaGCAGGGCCAGAACGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGRQPGLRLQARSTLQPQILVLA*QGQNAG Trigger: CCCTGCGTTCTGGCCCTGGCAAGCAAGAACAAGGAT...CTGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCGCAGGCTTTCCTGGATaGCTTCGATTTCCGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GQRQTARTQTPSQVNSTTAGFPG*LRFPTA Trigger: AGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGC...GGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCATTCCTCAGACACACACAATCCAATCTCACATTCTTTCCTCTCTCCTGCCGGTGCAGCTCGCTCTaGCAGGAACCCTGGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPFLRHTQSNLTFFPLSCRCSSL*QEPWGT Trigger: TGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCG...GCAGGAGAGAGGAAAGAATGTGAGATTGGATTGTGTGTGTCTGAGGAATGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | TGTAGGGCACATCCTATAAACACACACACACGAGCATGTGCACGCGTGTGCACACACACGCCTTGCCCGTaGATCAATGTACGCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CRAHPINTHTRACARVCTHTPCP*INVRRG Trigger: GCCCCTGCGTACATTGATGCACGGGCAAGGCGTGTG...TGTGCACACGCGTGCACATGCTCGTGTGTGTGTGTTTATAGGATGTGCCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | CGCGTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGGGTGGAAGTTGCCGTTaGGGTCACAGTTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RVCTHTQREILGRARGRQGGSCR*GHSLEW Trigger: CCATTCCAAACTGTGACCGCAACGGCAACTTCCACC...CTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACACGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCAGTCTGCAGGCTTTCCTaGATGGCTTCGATTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQTARTQTPSQVNSTTPVCRLS*MASISD Trigger: GTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGAC...TGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCAATGAAGAGGTCTTCGTaGGTACGGCTCTGTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VCTHTQREILGRARGRQPMKRSS*VRLCEA Trigger: CGCCTCACAGAGCCGTACCCACGAAGACCTCTTCAT...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCAGTCTGCAGGCTTTCCTaGATGGCTTCGATTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTHTQREILGRARGRQPVCRLS*MASISD Trigger: GTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGAC...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCGTTGCGGTCACAGTTTaGAATGGGGATGATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PEADSQDSDSKPGQLYNPVAVTV*NGDDEE Trigger: CTCTTCATCATCCCCATTCCAAACTGTGACCGCAAC...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGGGCTAAAGAAGCAGGGGTTCGAAGGTGTGCCTTAGGGAAAGAAATATCCGTGCACACGCCTTaGCCGTGCATCAATGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGAKEAGVRRCALGKEISVHTP*PCINVR Trigger: GCGTACATTGATGCACGGGCAAGGCGTGTGCACGGA...TATTTCTTTCCCTAAGGCACACCTTCGAACCCCTGCTTCTTTAGCCCCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | GCAAACTCTAGGCTGTGCCCCAGCTCTGCTGTGTCCCCGATTCAGAAGCCAATGGTTGCGGTCACAGTTTaGAATGGGGATGATGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ANSRLCPSSAVSPIQKPMVAVTV*NGDDEE Trigger: CTCTTCATCATCCCCATTCCAAACTGTGACCGCAAC...CATTGGCTTCTGAATCGGGGACACAGCAGAGCTGGGGCACAGCCTAGAGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| 3UTR CAA 72 bp | GCACACTGGGAATTCCTATTGCTACACTCAGACCTCTaGGGGGTATCTAAGCCCATCATGGGCACGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AHWEFLLLHSDL*GVSKPIMGTRR Trigger: CCTTCTCGTGCCCATGATGGGCTTAGATACCCCCAAGAGGTCTGAGTGTAGCAATAGGAATTCCCAGTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| 3UTR CAA 72 bp | AAGGTTCTCATCCAACCAGGCTCTCAGAATTCAGCGTaGGTGCACGCCCATCCCCCAGTCAAGAACAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVLIQPGSQNSA*VHAHPPVKNRN Trigger: GTTTCTGTTCTTGACTGGGGGATGGGCGTGCACCAACGCTGAATTCTGAGAGCCTGGTTGGATGAGAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR GCA 90 bp | GGGCCATTCCTCAGACACACACAATCCAATCTCACATTCTTTCCTCTCTCCTGCTCCTTGTCAGAGGTCTaGAGGCTTTCCTGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPFLRHTQSNLTFFPLSCSLSEV*RLSWMA Trigger: AGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGA...GCAGGAGAGAGGAAAGAATGTGAGATTGGATTGTGTGTGTCTGAGGAATGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGGGCTAAAGAAGCAGGGGTTCGAAGGTGTGCCTTAGGGAAAGAAATAGCAGGCTTTCCTGGATaGCTTCGATTTCCGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGAKEAGVRRCALGKEIAGFPG*LRFPTA Trigger: AGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGC...TATTTCTTTCCCTAAGGCACACCTTCGAACCCCTGCTTCTTTAGCCCCTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
||
| CDS-3UTR CCA 90 bp | AGAATGGGGCCATTCCTCAGACACACACAATCCAATCTCACATTCTTTCCTCTCCGGGGTGACACTGTTTaGGGTGGAAGTTGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMGPFLRHTQSNLTFFPLRGDTV*GGSCRC Trigger: GCAACGGCAACTTCCACCCCAAACAGTGTCACCCCG...GAGAGGAAAGAATGTGAGATTGGATTGTGTGTGTCTGAGGAATGGCCCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| 3UTR CAA 72 bp | GGGCAAGAGACTCAATACAGAGTCTCTAGGCCACTTTaGACCTCCAGGGAGAGACTTTCATCTGATATTATC | + |
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Preference number: 4 (lower is better) Translates to: GQETQYRVSRPL*TSRERLSSDII Trigger: GATAATATCAGATGAAAGTCTCTCCCTGGAGGTCAAAAGTGGCCTAGAGACTCTGTATTGAGTCTCTTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS GCA 90 bp | TCGTGGGTACGGCTCTGTGAGGCGGCCAGCCGCTCCAGGGCCCGGTaGAGCTCGCTCTGGCAGGAACCCTGGGGCACAGGACGGGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: SWVRLCEAASRSRAR*SSLWQEPWGTGRGS Trigger: GGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGAGCGGCTGGCCGCCTCACAGAGCCGTACCCACGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS CCA 90 bp | CTCTGTGAGGCGGCCAGCCGCTCCAGGGCCCGGTGCAGCTCGCTCTaGCAGGAACCCTGGGGCACAGGACGGGGTTCCTCCCGAGGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LCEAASRSRARCSSL*QEPWGTGRGSSRGV Trigger: GACACCTCGGGAGGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGAGCGGCTGGCCGCCTCACAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS CCA 90 bp | GCCAGCCGCTCCAGGGCCCGGTGCAGCTCGCTCTGGCAGGAACCCTaGGGCACAGGACGGGGTTCCTCCCGAGGTGTCCCCACGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: ASRSRARCSSLWQEP*GTGRGSSRGVPTIF Trigger: GAAGATCGTGGGGACACCTCGGGAGGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGAGCGGCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACACAGTCCAGCTCCCCCTaGGGTTCCAAACCCCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QGQRQTARTQTPSQVNSTQSSSP*GSKPPG Trigger: TCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACTG...TGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACACTCCGTGCACACGCCTaGCCCGTGCATCAATGTACG | + |
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Preference number: 5 (lower is better) Translates to: QGQRQTARTQTPSQVNSTLRAHA*PVHQCT Trigger: CGTACATTGATGCACGGGCAAGGCGTGTGCACGGAG...TGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | CAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCACAGTCCAGCTCCCCCTaGGGTTCCAAACCCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QRQTARTQTPSQVNSTTPQSSSP*GSKPPG Trigger: TCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACTG...TGGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| CDS GCA 90 bp | AGGTCTGCAGGCTTTCCTGGATGGCTTCGATTTCCGACAGCTCCGTaGACACGCCTTGCCCGTGCATCAATGTACGCAGGGGCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RSAGFPGWLRFPTAP*TRLARASMYAGASP Trigger: TGGAGAAGCCCCTGCGTACATTGATGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS CCA 90 bp | GATGTTCGCTCTCATCCTTGTCAGAGGTCTGCAGGCTTTCCTGGATaGCTTCGATTTCCGACAGCTCCGTGCACACGCCTTGCCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DVRSHPCQRSAGFPG*LRFPTAPCTRLARA Trigger: TGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGATGAGAGCGAACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS CCA 90 bp | TTGGGATGTTCGCTCTCATCCTTGTCAGAGGTCTGCAGGCTTTCCTaGATGGCTTCGATTTCCGACAGCTCCGTGCACACGCCTTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGCSLSSLSEVCRLS*MASISDSSVHTPCP Trigger: CGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGATGAGAGCGAACATCCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACATGGGCACTGCAGGGGTaGAAGCTGTTGTTGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: QGQRQTARTQTPSQVNSTWALQG*KLLLGC Trigger: ACATCCCAACAACAGCTTCAACCCCTGCAGTGCCCA...TGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | GCCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCTGTTCGCTCTCATCCTaGTTCTTGCTTGCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ARGRQPGLRLQARSTLQPCSLSS*FLLARA Trigger: GGCCCTGGCAAGCAAGAACAAGGATGAGAGCGAACA...GGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140772.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCTGTTCGCTCTCATCCTaGTCAGAGGTCTGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PEADSQDSDSKPGQLYNPCSLSS*SEVCRL Trigger: AAGCCTGCAGACCTCTGACAAGGATGAGAGCGAACA...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCACATCCTTGTTCTTGCTaGCCAGGGCCAGAACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTHTQREILGRARGRQPHPCSC*PGPERR Trigger: CCTGCGTTCTGGCCCTGGCAAGCAAGAACAAGGATG...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140772.2 |
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| CDS-3UTR CAA 90 bp | CACGCGTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACTGTTCGCTCTCATCCTaGTCAGAGGTCTGCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HACAHTHKGKFWAGPEADCSLSS*SEVCRL Trigger: AAGCCTGCAGACCTCTGACAAGGATGAGAGCGAACA...GTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACACGCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS-3UTR CAA 90 bp | GTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCACTCTCATCCTTGTTCTaGCTTGCCAGGGCCAGAACG | + |
|
Preference number: 5 (lower is better) Translates to: VCTHTQREILGRARGRQPLSSLF*LARART Trigger: CGTTCTGGCCCTGGCAAGCAAGAACAAGGATGAGAG...TGGCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140772.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGGCAGACAGCCAGGACTCAGACTCCAAGCCAGGTCAACTCTACAACCCCCTCCGATCTCTAATTTaGGCCATATGCTTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PEADSQDSDSKPGQLYNPLRSLI*AICFCR Trigger: CCTGCAGAAGCATATGGCCAAAATTAGAGATCGGAG...GGGGTTGTAGAGTTGACCTGGCTTGGAGTCTGAGTCCTGGCTGTCTGCCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | AGATGGAGAGGGAGGGCGTTCAATGTTCACCACTTTCTTTCTCTCTCACTCCAACTCCGTGCACACGCCTaGCCCGTGCATCAATGTACG | + |
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Preference number: 5 (lower is better) Translates to: RWRGRAFNVHHFLSLSLQLRAHA*PVHQCT Trigger: CGTACATTGATGCACGGGCAAGGCGTGTGCACGGAG...TTGGAGTGAGAGAGAAAGAAAGTGGTGAACATTGAACGCCCTCCCTCTCCATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS-3UTR CAA 90 bp | GCGTGTGCACACACACACAAAGGGAAATTTTGGGCAGGGCCAGAGGCAGACAGCCTCCGATCTCTAATTTaGGCCATATGCTTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ACAHTHKGKFWAGPEADSLRSLI*AICFCR Trigger: CCTGCAGAAGCATATGGCCAAAATTAGAGATCGGAG...GCTGTCTGCCTCTGGCCCTGCCCAAAATTTCCCTTTGTGTGTGTGTGCACACGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS-3UTR CAA 90 bp | AGAATGGGGCCATTCCTCAGACACACACAATCCAATCTCACATTCTTTCCTCTCCAGTCCAGCTCCCCCTaGGGTTCCAAACCCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RMGPFLRHTQSNLTFFPLQSSSP*GSKPPG Trigger: TCCTGGGGGTTTGGAACCCAAGGGGGAGCTGGACTG...GAGAGGAAAGAATGTGAGATTGGATTGTGTGTGTCTGAGGAATGGCCCCATTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS TCA 90 bp | TTGCTCCGATCTCTAATTTTGGCCATATGCTTCTGCAGGCACCTGTaGTCATGGGCACTGCAGGGGTTGAAGCTGTTGTTGGGATGTTCG | + |
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Preference number: 5 (lower is better) Translates to: LLRSLILAICFCRHL*SWALQGLKLLLGCS Trigger: CGAACATCCCAACAACAGCTTCAACCCCTGCAGTGCCCATGATCACAGGTGCCTGCAGAAGCATATGGCCAAAATTAGAGATCGGAGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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| CDS-3UTR CAA 90 bp | CCAATAACCACAAATAGGGACCAGAATGGGGCCATTCCTCAGACACACACAATCCTCCGATCTCTAATTTaGGCCATATGCTTCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PITTNRDQNGAIPQTHTILRSLI*AICFCR Trigger: CCTGCAGAAGCATATGGCCAAAATTAGAGATCGGAG...GATTGTGTGTGTCTGAGGAATGGCCCCATTCTGGTCCCTATTTGTGGTTATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS CCA 72 bp | TCCAGGGCCCGGTGCAGCTCGCTCTGGCAGGAACCCTaGGGCACAGGACGGGGTTCCTCCCGAGGTGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SRARCSSLWQEP*GTGRGSSRGVP Trigger: GGGGACACCTCGGGAGGAACCCCGTCCTGTGCCCCAGGGTTCCTGCCAGAGCGAGCTGCACCGGGCCCTGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS CCA 72 bp | ACACCCCGCAGGGCATCCCCAAGCCCAGGGCGCAAGTaGCGCAACAACCGCAGCCTGGCTCCCGCACCAACT | + |
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Preference number: 6 (lower is better) Translates to: TPRRASPSPGRK*RNNRSLAPAPT Trigger: AGTTGGTGCGGGAGCCAGGCTGCGGTTGTTGCGCCACTTGCGCCCTGGGCTTGGGGATGCCCTGCGGGGTGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS CCA 72 bp | TGCCACGCTGTCCGTCCAGGGCGGGGTGACACTGTTTaGGGTGGAAGTTGCCGTTGCGGTCACAGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: CHAVRPGRGDTV*GGSCRCGHSLE Trigger: TTCCAAACTGTGACCGCAACGGCAACTTCCACCCCAAACAGTGTCACCCCGCCCTGGACGGACAGCGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS GCA 72 bp | ATGGCTTCGATTTCCGACAGCTCCGTGCACACGCCTTaGCCGTGCATCAATGTACGCAGGGGCTTCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: MASISDSSVHTP*PCINVRRGFST Trigger: GGTGGAGAAGCCCCTGCGTACATTGATGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS GCA 72 bp | GGCTTTCCTGGATGGCTTCGATTTCCGACAGCTCCGTaGACACGCCTTGCCCGTGCATCAATGTACGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GFPGWLRFPTAP*TRLARASMYAG Trigger: CCCTGCGTACATTGATGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATCCAGGAAAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS CAA 72 bp | GATGGCTTCGATTTCCGACAGCTCCGTGCACACGCCTaGCCCGTGCATCAATGTACGCAGGGGCTTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGFDFRQLRAHA*PVHQCTQGLLH Trigger: GTGGAGAAGCCCCTGCGTACATTGATGCACGGGCAAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017637.13 |
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| CDS CCA 72 bp | TCTCATCCTTGTCAGAGGTCTGCAGGCTTTCCTGGATaGCTTCGATTTCCGACAGCTCCGTGCACACGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SHPCQRSAGFPG*LRFPTAPCTRL Trigger: AAGGCGTGTGCACGGAGCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGATGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS CCA 72 bp | CTGTTTGGGGTGGAAGTTGCCGTTGCGGTCACAGTTTaGAATGGGGATGATGAAGAGGTCTTCGTGGGTACG | + |
|
Preference number: 6 (lower is better) Translates to: LFGVEVAVAVTV*NGDDEEVFVGT Trigger: CGTACCCACGAAGACCTCTTCATCATCCCCATTCCAAACTGTGACCGCAACGGCAACTTCCACCCCAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 |
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| CDS GCA 72 bp | TTGTTGGGATGTTCGCTCTCATCCTTGTCAGAGGTCTaGAGGCTTTCCTGGATGGCTTCGATTTCCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLGCSLSSLSEV*RLSWMASISDS Trigger: GCTGTCGGAAATCGAAGCCATCCAGGAAAGCCTGCAGACCTCTGACAAGGATGAGAGCGAACATCCCAACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017637.13 ENSMUST00000177092.8 |
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| CDS TCA 72 bp | TCTCTAATTTTGGCCATATGCTTCTGCAGGCACCTGTaGTCATGGGCACTGCAGGGGTTGAAGCTGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLILAICFCRHL*SWALQGLKLLL Trigger: CAACAACAGCTTCAACCCCTGCAGTGCCCATGATCACAGGTGCCTGCAGAAGCATATGGCCAAAATTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017637.13 ENSMUST00000140772.2 ENSMUST00000177092.8 |
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