Pregenerated sensors for IGFBP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020427Ensembl transcript IDs: ENSMUST00000020702.11, ENSMUST00000135887.3
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCGCATGTCCACCCCGTAGGATGCAGTACAGTCTCCTCTCACCCTaGGTTGCCAGACCTCCTCCGCCTCGGCCTGGGGGAGAGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: SACPPRRMQYSLLSP*VARPPPPRPGGEQP Trigger: GGGCTGCTCTCCCCCAGGCCGAGGCGGAGGAGGTCTGGCAACGCAGGGTGAGAGGAGACTGTACTGCATCCTACGGGGTGGACATGCGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR TCA 90 bp | CAAGAAGGCAGAGGGCCAGCAGCATTGAAGCCCGTACTGGGTGGGTaGGTTAGGGGGCAGATGGCATCCGGGGCCTGGAGTACACGAGTG | + |
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Preference number: 1 (lower is better) Translates to: QEGRGPAALKPVLGG*VRGQMASGAWSTRV Trigger: CACTCGTGTACTCCAGGCCCCGGATGCCATCTGCCCCCTAACTCACCCACCCAGTACGGGCTTCAATGCTGCTGGCCCTCTGCCTTCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 90 bp | CTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATCAAGAAGATaGCTGACAAAGAAAGGTCCTTATCCTTGTCCTTATGGGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: LLPLGAFCWAKSSRR*LTKKGPYPCPYGLP Trigger: TGGGAGCCCATAAGGACAAGGATAAGGACCTTTCTTTGTCAGGCATCTTCTTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 90 bp | AGATCAGGCCACTTGCGGATACAGGGCCAGGCCCTTATTCAGAGATaGCACAATAAGGACCATGAGCCTCAGGCATATGCTTCCAGATGT | + |
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Preference number: 1 (lower is better) Translates to: RSGHLRIQGQALIQR*HNKDHEPQAYASRC Trigger: ACATCTGGAAGCATATGCCTGAGGCTCATGGTCCTTATTGTGCCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR TCA 90 bp | ACAGGGGATGGAAAGAGGATTTGTCTATATCAGCCACGGAACGTCTaGAATCAAGAAGGCAGAGGGCCAGCAGCATTGAAGCCCGTACTG | + |
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Preference number: 1 (lower is better) Translates to: TGDGKRICLYQPRNV*NQEGRGPAALKPVL Trigger: CAGTACGGGCTTCAATGCTGCTGGCCCTCTGCCTTCTTGATTTCAGACGTTCCGTGGCTGATATAGACAAATCCTCTTTCCATCCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR TCA 90 bp | TCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATCAAGAAGATGCCTaGCAAAGAAAGGTCCTTATCCTTGTCCTTATGGGCTCCCAGAGT | + |
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Preference number: 1 (lower is better) Translates to: SHLGLSAGPSHQEDA*QRKVLILVLMGSQS Trigger: ACTCTGGGAGCCCATAAGGACAAGGATAAGGACCTTTCTTTGTCAGGCATCTTCTTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 90 bp | TGGGTTTCCCCATTCTCCATAGGGCCTGCACTTATTTACAGGGGATaGAAAGAGGATTTGTCTATATCAGCCACGGAACGTCTGAAATCA | + |
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Preference number: 1 (lower is better) Translates to: WVSPFSIGPALIYRG*KEDLSISATERLKS Trigger: TGATTTCAGACGTTCCGTGGCTGATATAGACAAATCCTCTTTCCATCCCCTGTAAATAAGTGCAGGCCCTATGGAGAATGGGGAAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CAA 90 bp | CATGTCCACCCCGTAGGATGCAGTACAGTCTCCTCTCACCCTGCGTaGCCAGACCTCCTCCGCCTCGGCCTGGGGGAGAGCAGCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HVHPVGCSTVSSHPA*PDLLRLGLGESSPA Trigger: GGCTGGGCTGCTCTCCCCCAGGCCGAGGCGGAGGAGGTCTGGCAACGCAGGGTGAGAGGAGACTGTACTGCATCCTACGGGGTGGACATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCAGGCATATGCTTCCAGATGTCCGGGTCACTCGGTTATGGGTTTCCCCACCCGTACTGGGTGGGTaGGTTAGGGGGCAGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: SLRHMLPDVRVTRLWVSPPVLGG*VRGQMA Trigger: TGCCATCTGCCCCCTAACTCACCCACCCAGTACGGG...TGGGGAAACCCATAACCGAGTGACCCGGACATCTGGAAGCATATGCCTGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACGTAGATCAGGCCACTTaGGGATACAGGGCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: AQPPDTGSFPWACLQLYHVDQAT*GYRARP Trigger: GGGCCTGGCCCTGTATCCGCAAGTGGCCTGATCTAC...GTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATAGCTGCTCCTCCCACTTaGGGCTTTCTGCTGGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSPASRHRLLSLGVSAVIAAPPT*GFLLGQ Trigger: TTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGC...TATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCAGGCAGAATGTCTTGAGATTCCTTTGTGCTCTCAAGGAAAGCTCTGTATCCTCCGCCTCGGCCTaGGGGAGAGCAGCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IGRQNVLRFLCALKESSVSSASA*GRAAQP Trigger: AGGCTGGGCTGCTCTCCCCCAGGCCGAGGCGGAGGA...TACAGAGCTTTCCTTGAGAGCACAAAGGAATCTCAAGACATTCTGCCTGCCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTAGGTTAAGGACTTTCTTCTCCCTGAACAATCCCCTTTACCTGCCTCTCACTTTCCAAAGGAGCTaGGTCCGGGGCCGGAACCTC | + |
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Preference number: 2 (lower is better) Translates to: VVRLRTFFSLNNPLYLPLTFQRS*VRGRNL Trigger: GAGGTTCCGGCCCCGGACTCAGCTCCTTTGGAAAGT...GAGAGGCAGGTAAAGGGGATTGTTCAGGGAGAAGAAAGTCCTTAACCTAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTGGGGGTGTGGTTAGGGGACTTTCTTCTCCCTaGACAATCCCCTTTACCTGC | + |
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Preference number: 2 (lower is better) Translates to: RVFEATLTLVSVLGGVVRGLSSP*TIPFTC Trigger: GCAGGTAAAGGGGATTGTTCAGGGAGAAGAAAGTCC...CCTAACCACACCCCCAAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCCGCAGCCCCACCTCACAACAAACTTTATTTTGAGAGGCTGGACCAGAAAAGCTGTAGCCAGCTGCTaGTCATGTTGTTGGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: FPQPHLTTNFILRGWTRKAVASC*SCCWQS Trigger: AGACTGCCAACAACATGATCAGCAGCTGGCTACAGC...TTTTCTGGTCCAGCCTCTCAAAATAAAGTTTGTTGTGAGGTGGGGCTGCGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR GCA 90 bp | GCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACAAGTCATCAAGAAGATaGCTGACAAAGAAAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AQPPDTGSFPWACLQLYHKSSRR*LTKKGP Trigger: AGGACCTTTCTTTGTCAGGCATCTTCTTGATGACTT...GTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR GCA 90 bp | TTTAGAACAGAGCTGAGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTACAATCCCCTTTACCTaGCTCTCTCTGGGCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FRTELRVFEATLTLVSVLTIPFT*LSLGLA Trigger: AGCCAGGCCCAGAGAGAGGCAGGTAAAGGGGATTGT...AAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCTCAGCTCTGTTCTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR CAA 90 bp | TTCTCCATAGGGCCTGCACTTATTTACAGGGGATGGAAAGAGGATTaGTCTATATCAGCCACGGAACGTCTGAAATCAAGAAGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: FSIGPALIYRGWKED*SISATERLKSRRQR Trigger: CCTCTGCCTTCTTGATTTCAGACGTTCCGTGGCTGATATAGACAAATCCTCTTTCCATCCCCTGTAAATAAGTGCAGGCCCTATGGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACCTAATTATAAAGAGAGTTTaGGAAGGACCCCAAGATCAA | + |
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Preference number: 2 (lower is better) Translates to: QPPDTGSFPWACLQLYHLIIKRV*EGPQDQ Trigger: TTGATCTTGGGGTCCTTCTCAAACTCTCTTTATAAT...TAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR GCA 90 bp | TTCCCGCAGCCCCACCTCACAACAAACTTTATTTTGAGAGGCTGGACCAGAAAAAAGCGCACCATTATTTaGGACATCTCTGAACGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FPQPHLTTNFILRGWTRKKRTII*DISERG Trigger: TCCACGTTCAGAGATGTCGCAAATAATGGTGCGCTT...TTTTCTGGTCCAGCCTCTCAAAATAAAGTTTGTTGTGAGGTGGGGCTGCGGGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CCA 90 bp | TCAGGCCACTTGCGGATACAGGGCCAGGCCCTTATTCAGAGATGGCACAATAAGCTTATTTACAGGGGATaGAAAGAGGATTTGTCTATA | + |
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Preference number: 2 (lower is better) Translates to: SGHLRIQGQALIQRWHNKLIYRG*KEDLSI Trigger: TATAGACAAATCCTCTTTCCATCCCCTGTAAATAAG...CTTATTGTGCCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR TCA 90 bp | ATAGGCAGGCAGAATGTCTTGAGATTCCTTTGTGCTCTCAAGGAAAGCTCTGTAAGAAATCTGTGTTTTTaGAAAACTGCCTTCCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: IGRQNVLRFLCALKESSVRNLCF*KTAFPQ Trigger: CTGCGGGAAGGCAGTTTTTCAAAAACACAGATTTCT...TACAGAGCTTTCCTTGAGAGCACAAAGGAATCTCAAGACATTCTGCCTGCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR TCA 90 bp | CCAAATATGCCAGGTTCTCCTGGAAGAAAACAGTGTGCTCTAACCCTCAGGACTGTGCTTGCTTGCATATaGAATAGTGCATATTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PNMPGSPGRKQCALTLRTVLACI*NSAYLK Trigger: CTTCAAATATGCACTATTTCATATGCAAGCAAGCAC...AGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCATATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTGCTCTAACCCTCAGGACTACTGCGGATAAAGTTTTATTTAAAACCCCCCATTTAGAACAGAGCTaGGAGTTTTTGAAGCTACAC | + |
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Preference number: 2 (lower is better) Translates to: QCALTLRTTADKVLFKTPHLEQS*EFLKLH Trigger: GTGTAGCTTCAAAAACTCTCAGCTCTGTTCTAAATG...GGGGGTTTTAAATAAAACTTTATCCGCAGTAGTCCTGAGGGTTAGAGCACACTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR TCA 72 bp | CAATTCCCCTTAACCTCAACCACTTTCCAAAGGAGCTaGGTCCGGGGCCGGAACCTCTGGCTTACGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: QFPLTSTTFQRS*VRGRNLWLTWH Trigger: GTGCCACGTAAGCCAGAGGTTCCGGCCCCGGACTCAGCTCCTTTGGAAAGTGGTTGAGGTTAAGGGGAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR GCA 72 bp | ATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACTTaGGGATACAGGGCCAGGCCCTTATTCAGAGATGGC | + |
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Preference number: 3 (lower is better) Translates to: ILSHSSQVDQAT*GYRARPLFRDG Trigger: GCCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGATCTACTTGGGAACTGTGGGAGAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 72 bp | TGGAGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTaGTGGGCCAAGTCATCAAGAAGATGCCTGACAAAG | + |
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Preference number: 3 (lower is better) Translates to: WSPMLLLPLGAF*WAKSSRRCLTK Trigger: CTTTGTCAGGCATCTTCTTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 72 bp | ACCATTATTTGCGACATCTCTGAACGTGGAGTCCGATaGTGCTCCTCCCACTTGGGGCTTTCTGCTGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: TIICDISERGVR*CSSHLGLSAGP Trigger: TGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCCACGTTCAGAGATGTCGCAAATAATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 72 bp | TCTCTGAACGTGGAGTCCGATGCTGCTCCTCCCACTTaGGGCTTTCTGCTGGGCCAAGTCATCAAGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: SLNVESDAAPPT*GFLLGQVIKKM Trigger: CATCTTCTTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCCACGTTCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACAGAGGGCCAGCAGCATaGAAGCCCGTACTGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SKRDNTYPLPQFPSRSGHRGPAA*KPVLGG Trigger: CCCACCCAGTACGGGCTTCAATGCTGCTGGCCCTCT...GTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 72 bp | ATTATTTGCGACATCTCTGAACGTGGAGTCCGATGCTaGTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGT | + |
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Preference number: 3 (lower is better) Translates to: IICDISERGVRC*SSHLGLSAGPS Trigger: ACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCCACGTTCAGAGATGTCGCAAATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 72 bp | AGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTGCTaGGCCAAGTCATCAAGAAGATGCCTGACAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: SPMLLLPLGAFC*AKSSRRCLTKK Trigger: TTTCTTTGTCAGGCATCTTCTTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 72 bp | AGAGCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTTaGGCGTGTCTGCAGTTATATCACCTAACATCTCTA | + |
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Preference number: 3 (lower is better) Translates to: RAAQPPDTGSFP*ACLQLYHLTSL Trigger: TAGAGATGTTAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CAA 90 bp | AGCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATAGGTTTGTGTGTGTGTTaGTTTTCACTCAGTTCACCA | + |
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Preference number: 3 (lower is better) Translates to: SSPASRHRLLSLGVSAVIGLCVC*FSLSSP Trigger: TGGTGAACTGAGTGAAAACAAACACACACACAAACC...TATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 72 bp | GCTGATAGGCAGGCAGAATGTCTTGAGATTCCTTTGTaGTCTCAAGGAAAGCTCTGTACAGCGCATGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: ADRQAECLEIPL*SQGKLCTAHVH Trigger: GTGGACATGCGCTGTACAGAGCTTTCCTTGAGAGCACAAAGGAATCTCAAGACATTCTGCCTGCCTATCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCCACTTGCGGATACAGGGCCAGGCCCTTATTCAGAGATGGCACAATAAGCTGCTGATCATGTTGTaGGCAGTCTTTTGTGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: SGHLRIQGQALIQRWHNKLLIML*AVFCAK Trigger: TTTTGCACAAAAGACTGCCAACAACATGATCAGCAG...CTTATTGTGCCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR TCA 72 bp | GGAAAGAGGATTTGTCTATATCAGCCACGGAACGTCTaGAATCAAGAAGGCAGAGGGCCAGCAGCATTGAAG | + |
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Preference number: 3 (lower is better) Translates to: GKRICLYQPRNV*NQEGRGPAALK Trigger: CTTCAATGCTGCTGGCCCTCTGCCTTCTTGATTTCAGACGTTCCGTGGCTGATATAGACAAATCCTCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR GCA 72 bp | CACTCGGTTATGGGTTTCCCCATTCTCCATAGGGCCTaGACTTATTTACAGGGGATGGAAAGAGGATTTGTC | + |
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Preference number: 3 (lower is better) Translates to: HSVMGFPILHRA*TYLQGMERGFV Trigger: GACAAATCCTCTTTCCATCCCCTGTAAATAAGTGCAGGCCCTATGGAGAATGGGGAAACCCATAACCGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACCAGCTGCTGATCATGTaGTTGGCAGTCTTTTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SKRDNTYPLPQFPSRSGHQLLIM*LAVFCA Trigger: TGCACAAAAGACTGCCAACAACATGATCAGCAGCTG...GTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR-3UTR CAA 90 bp | TCAGGCCACTTGCGGATACAGGGCCAGGCCCTTATTCAGAGATGGCACAATAAGCAAAATAAGGCATATTaGAGCTCCATATTATGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SGHLRIQGQALIQRWHNKQNKAY*SSILCG Trigger: GCCACATAATATGGAGCTCAAATATGCCTTATTTTG...CTTATTGTGCCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 72 bp | CCATTCTCCATAGGGCCTGCACTTATTTACAGGGGATaGAAAGAGGATTTGTCTATATCAGCCACGGAACGT | + |
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Preference number: 3 (lower is better) Translates to: PFSIGPALIYRG*KEDLSISATER Trigger: ACGTTCCGTGGCTGATATAGACAAATCCTCTTTCCATCCCCTGTAAATAAGTGCAGGCCCTATGGAGAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CCA 72 bp | ATCTCTAATTCAGAAACCAAATATGCCAGGTTCTCCTaGAAGAAAACAGTGTGCTCTAACCCTCAGGACTAC | + |
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Preference number: 3 (lower is better) Translates to: ISNSETKYARFS*KKTVCSNPQDY Trigger: GTAGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCATATTTGGTTTCTGAATTAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CTGCAGCTCCTGGGCCAGGGAGCCCAGGATGAGGGGTGGGTACCTGGCAGCCATTCACTCGGTGTGTGCTaGGGACAACCTGGCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LQLLGQGAQDEGWVPGSHSLGVC*GQPGFP Trigger: TGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGA...ATGGCTGCCAGGTACCCACCCCTCATCCTGGGCTCCCTGGCCCAGGAGCTGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CTGCAGCTCCTGGGCCAGGGAGCCCAGGATGAGGGGTGGGTACCTGGCAGCCATCTTCTTGTCACAGTTTaGGATGTGGACGCCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LQLLGQGAQDEGWVPGSHLLVTV*DVDASG Trigger: CCCAGAGGCGTCCACATCCCAAACTGTGACAAGAAG...ATGGCTGCCAGGTACCCACCCCTCATCCTGGGCTCCCTGGCCCAGGAGCTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CTGCAGCTCCTGGGCCAGGGAGCCCAGGATGAGGGGTGGGTACCTGGCAGCCATTTGGCATGGAGTGGATaGAACTTGGAATCGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: LQLLGQGAQDEGWVPGSHLAWSG*NLESVT Trigger: AGTGACCGATTCCAAGTTCCATCCACTCCATGCCAA...ATGGCTGCCAGGTACCCACCCCTCATCCTGGGCTCCCTGGCCCAGGAGCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | GGAGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATCAAGTGCTGGGGACAACCTaGCTTTCCACACTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: GVRCCSSHLGLSAGPSHQVLGTT*LSTLPA Trigger: TGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCAC...TTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | GCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATTCACAGTTTGGGATGTaGACGCCTCTGGGACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: AAQPPDTGSFPWACLQLYSQFGM*TPLGLS Trigger: GCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGA...ATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR GCA 90 bp | GTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACTGGGAGGGGAGGTAGGTaGTTAGGCTGCCTGCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: VRETTHILSHSSQVDQATGRGGR*LGCLQR Trigger: GCGCTGCAGGCAGCCTAAGCACCTACCTCCCCTCCC...AGTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | CGTGGAGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATTTGGCATGGAGTGGATaGAACTTGGAATCGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGVRCCSSHLGLSAGPSHLAWSG*NLESVT Trigger: AGTGACCGATTCCAAGTTCCATCCACTCCATGCCAA...ATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | GCTACACTGACCCTGGTGTCTGTCCTTGGGGGTGTGGTTAGGTTAAGGACTTTCCTTGGTGTCGTAGCCTaGCAAGGGCTGCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ATLTLVSVLGGVVRLRTFLGVVA*QGLPIL Trigger: AAGTATGGGCAGCCCTTGCCAGGCTACGACACCAAG...GAAAGTCCTTAACCTAACCACACCCCCAAGGACAGACACCAGGGTCAGTGTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| 3UTR CAA 72 bp | TATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACTaGCGGATACAGGGCCAGGCCCTTATTCAGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: YPLPQFPSRSGH*RIQGQALIQRW Trigger: CCATCTCTGAATAAGGGCCTGGCCCTGTATCCGCAAGTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CAA 72 bp | GAGAGCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTaGGGCGTGTCTGCAGTTATATCACCTAACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESSPASRHRLLS*GVSAVISPNIS Trigger: AGAGATGTTAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR GCA 90 bp | TTTAGAACAGAGCTGAGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTGGGAGGGGAGGTAGGTaGTTAGGCTGCCTGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRTELRVFEATLTLVSVLGRGGR*LGCLQR Trigger: GCGCTGCAGGCAGCCTAAGCACCTACCTCCCCTCCC...AAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCTCAGCTCTGTTCTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACCTACTTCTTGTCACAGTTTaGGATGTGGACGCCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPPDTGSFPWACLQLYHLLLVTV*DVDASG Trigger: CCCAGAGGCGTCCACATCCCAAACTGTGACAAGAAG...TAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR GCA 90 bp | AGTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACAGAAGCCCCGCTTTCTaGCTTTGGAAGGGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDNTYPLPQFPSRSGHRSPAF*LWKGGT Trigger: AGTGCCGCCCTTCCAAAGGCAGAAAGCGGGGCTTCT...GTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR GCA 90 bp | GTGGTTAGGTTAAGGACTTTCTTCTCCCTGAACAATCCCCTTTACCTGCCTCTCAGAAGCCCCGCTTTCTaGCTTTGGAAGGGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VVRLRTFFSLNNPLYLPLRSPAF*LWKGGT Trigger: AGTGCCGCCCTTCCAAAGGCAGAAAGCGGGGCTTCT...GAGAGGCAGGTAAAGGGGATTGTTCAGGGAGAAGAAAGTCCTTAACCTAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CCAAATATGCCAGGTTCTCCTGGAAGAAAACAGTGTGCTCTAACCCTCAGGACTGTGCTGGGGACAACCTaGCTTTCCACACTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNMPGSPGRKQCALTLRTVLGTT*LSTLPA Trigger: TGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCAC...AGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCATATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | GCAGCCCAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATACATCCATCTTGGCATaGAGTGGATGGAACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAQPPDTGSFPWACLQLYTSILA*SGWNLE Trigger: TTCCAAGTTCCATCCACTCCATGCCAAGATGGATGT...ATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTGGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACCTTGGTGTCGTAGCCTaGCAAGGGCTGCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDNTYPLPQFPSRSGHLGVVA*QGLPIL Trigger: AAGTATGGGCAGCCCTTGCCAGGCTACGACACCAAG...GTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR TCA 90 bp | CAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACCTATGGGACTCAGCACATTaGGGAACTTCAGATGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPPDTGSFPWACLQLYHLWDSAH*GTSDDS Trigger: TGAATCATCTGAAGTTCCTCAATGTGCTGAGTCCCA...TAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
||
| CDS-3UTR CCA 90 bp | TTCCCGCAGCCCCACCTCACAACAAACTTTATTTTGAGAGGCTGGACCAGAAAAGGAGTGGATGGAACTTaGAATCGGTCACTCGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPQPHLTTNFILRGWTRKGVDGT*NRSLGV Trigger: CACACCGAGTGACCGATTCCAAGTTCCATCCACTCC...TTTTCTGGTCCAGCCTCTCAAAATAAAGTTTGTTGTGAGGTGGGGCTGCGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTGGGGGTGTGGTTAGGCATCTTGGCATGGAGTaGATGGAACTTGGAATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVFEATLTLVSVLGGVVRHLGME*MELGIG Trigger: ACCGATTCCAAGTTCCATCCACTCCATGCCAAGATG...CCTAACCACACCCCCAAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR TCA 90 bp | ATGCCAGGTTCTCCTGGAAGAAAACAGTGTGCTCTAACCCTCAGGACTACTGCGTGGGACTCAGCACATTaGGGAACTTCAGATGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPGSPGRKQCALTLRTTAWDSAH*GTSDDS Trigger: TGAATCATCTGAAGTTCCTCAATGTGCTGAGTCCCA...CGCAGTAGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | ATAGGCAGGCAGAATGTCTTGAGATTCCTTTGTGCTCTCAAGGAAAGCTCTGTATCACTCGGTGTGTGCTaGGGACAACCTGGCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IGRQNVLRFLCALKESSVSLGVC*GQPGFP Trigger: TGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGA...TACAGAGCTTTCCTTGAGAGCACAAAGGAATCTCAAGACATTCTGCCTGCCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | AGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTGGGGGTGTGGTTAGGACATCCATCTTGGCATaGAGTGGATGGAACTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVFEATLTLVSVLGGVVRTSILA*SGWNLE Trigger: TTCCAAGTTCCATCCACTCCATGCCAAGATGGATGT...CCTAACCACACCCCCAAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CCA 90 bp | CAGTGTGCTCTAACCCTCAGGACTACTGCGGATAAAGTTTTATTTAAAACCCCCTCACAGTTTGGGATGTaGACGCCTCTGGGACTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QCALTLRTTADKVLFKTPSQFGM*TPLGLS Trigger: GCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGA...GGGGGTTTTAAATAAAACTTTATCCGCAGTAGTCCTGAGGGTTAGAGCACACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR TCA 90 bp | TCAGGCATATGCTTCCAGATGTCCGGGTCACTCGGTTATGGGTTTCCCCATTCTTTGAGGAACTTCAGATaGTTCAGTGTGTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SGICFQMSGSLGYGFPHSLRNFR*FSVSSI Trigger: AATGGAGGACACACTGAATCATCTGAAGTTCCTCAA...AGAATGGGGAAACCCATAACCGAGTGACCCGGACATCTGGAAGCATATGCCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CCA 90 bp | AGTAAGAGAGACAACACATATCCTCTCCCACAGTTCCCAAGTAGATCAGGCCACCATCTTGGCATGGAGTaGATGGAACTTGGAATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDNTYPLPQFPSRSGHHLGME*MELGIG Trigger: ACCGATTCCAAGTTCCATCCACTCCATGCCAAGATG...GTGGCCTGATCTACTTGGGAACTGTGGGAGAGGATATGTGTTGTCTCTCTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| 3UTR CAA 72 bp | GGGCCTGCACTTATTTACAGGGGATGGAAAGAGGATTaGTCTATATCAGCCACGGAACGTCTGAAATCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPALIYRGWKED*SISATERLKSR Trigger: TCTTGATTTCAGACGTTCCGTGGCTGATATAGACAAATCCTCTTTCCATCCCCTGTAAATAAGTGCAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR TCA 90 bp | TTTAGAACAGAGCTGAGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTTTGAGGAACTTCAGATaGTTCAGTGTGTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FRTELRVFEATLTLVSVLLRNFR*FSVSSI Trigger: AATGGAGGACACACTGAATCATCTGAAGTTCCTCAA...AAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCTCAGCTCTGTTCTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS CCA 90 bp | CGCACCAGCTCCGTGCACGCGGGCGCGGTGGGCGGAGGCGCGCACTaGGACAGCGCACGCGCGTCGCACGGTTCGCAGCGCACCACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RTSSVHAGAVGGGAH*DSARASHGSQRTTG Trigger: CCCCGTGGTGCGCTGCGAACCGTGCGACGCGCGTGCGCTGTCCCAGTGCGCGCCTCCGCCCACCGCGCCCGCGTGCACGGAGCTGGTGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS TCA 90 bp | CCTGGCTTTCCACACTCCCAGCATTGTGCTCCTCCTCGGACTCACTaGTGTTTCCTGGAGCAGGTTGGGAGGGGAGGTAGGTGCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGFPHSQHCAPPRTH*CFLEQVGRGGRCLG Trigger: GCCTAAGCACCTACCTCCCCTCCCAACCTGCTCCAGGAAACATCAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS GCA 90 bp | CGGTGTGTGCTGGGGACAACCTGGCTTTCCACACTCCCAGCATTGTaGTCCTCCTCGGACTCACTGATGTTTCCTGGAGCAGGTTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCVLGTTWLSTLPAL*SSSDSLMFPGAGWE Trigger: CTCCCAACCTGCTCCAGGAAACATCAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CCA 90 bp | GGATGGAACTTGGAATCGGTCACTCGGTGTGTGCTGGGGACAACCTaGCTTTCCACACTCCCAGCATTGTGCTCCTCCTCGGACTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GWNLESVTRCVLGTT*LSTLPALCSSSDSL Trigger: CAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAAGTTCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | GGAGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATCAACCTTCTTGTCACAGTTaGGGATGTGGACGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GVRCCSSHLGLSAGPSHQPSCHS*GCGRLW Trigger: CCAGAGGCGTCCACATCCCAAACTGTGACAAGAAGG...TTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS-3UTR CAA 90 bp | CAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACCTACCCCGCTTTCTGCCTTaGGAAGGGCGGCACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPPDTGSFPWACLQLYHLPRFLP*EGRHCF Trigger: GAAGCAGTGCCGCCCTTCCAAAGGCAGAAAGCGGGG...TAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS CCA 90 bp | TGGCATGGAGTGGATGGAACTTGGAATCGGTCACTCGGTGTGTGCTaGGGACAACCTGGCTTTCCACACTCCCAGCATTGTGCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WHGVDGTWNRSLGVC*GQPGFPHSQHCAPP Trigger: AGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAAGTTCCATCCACTCCATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | AGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTGGGGGTGTGGTTAGGCCCCGCTTTCTGCCTTaGGAAGGGCGGCACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RVFEATLTLVSVLGGVVRPRFLP*EGRHCF Trigger: GAAGCAGTGCCGCCCTTCCAAAGGCAGAAAGCGGGG...CCTAACCACACCCCCAAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS GCA 90 bp | TCTTGGCATGGAGTGGATGGAACTTGGAATCGGTCACTCGGTGTGTaGTGGGGACAACCTGGCTTTCCACACTCCCAGCATTGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWHGVDGTWNRSLGV*WGQPGFPHSQHCAP Trigger: AGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAAGTTCCATCCACTCCATGCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | GGAGTCCGATGCTGCTCCTCCCACTTGGGGCTTTCTGCTGGGCCAAGTCATCAATTGATGACATCCATCTaGGCATGGAGTGGATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GVRCCSSHLGLSAGPSHQLMTSI*AWSGWN Trigger: GTTCCATCCACTCCATGCCAAGATGGATGTCATCAA...TTGATGACTTGGCCCAGCAGAAAGCCCCAAGTGGGAGGAGCAGCATCGGACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS TCA 90 bp | GGGATGTGGACGCCTCTGGGACTCAGCACATTGAGGAACTTCAGATaGTTCAGTGTGTCCTCCATTTCTCTGCGGCAGGGACCGTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GMWTPLGLSTLRNFR*FSVSSISLRQGPYS Trigger: AGAATACGGTCCCTGCCGCAGAGAAATGGAGGACACACTGAATCATCTGAAGTTCCTCAATGTGCTGAGTCCCAGAGGCGTCCACATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CCA 90 bp | AGGGCGGCACTGCTTCTTCTTATAGAACCCCTTCTTGTCACAGTTTaGGATGTGGACGCCTCTGGGACTCAGCACATTGAGGAACTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAALLLLIEPLLVTV*DVDASGTQHIEELQ Trigger: CTGAAGTTCCTCAATGTGCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGACAAGAAGGGGTTCTATAAGAAGAAGCAGTGCCGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | TTCCCGCAGCCCCACCTCACAACAAACTTTATTTTGAGAGGCTGGACCAGAAAATCCACACTCCCAGCATaGTGCTCCTCCTCGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FPQPHLTTNFILRGWTRKSTLPA*CSSSDS Trigger: TGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGA...TTTTCTGGTCCAGCCTCTCAAAATAAAGTTTGTTGTGAGGTGGGGCTGCGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
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| CDS TCA 90 bp | TCTTGTCACAGTTTGGGATGTGGACGCCTCTGGGACTCAGCACATTaGGGAACTTCAGATGATTCAGTGTGTCCTCCATTTCTCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SCHSLGCGRLWDSAH*GTSDDSVCPPFLCG Trigger: GCCGCAGAGAAATGGAGGACACACTGAATCATCTGAAGTTCCTCAATGTGCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | CCAAATATGCCAGGTTCTCCTGGAAGAAAACAGTGTGCTCTAACCCTCAGGACTCCTTCTTGTCACAGTTaGGGATGTGGACGCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PNMPGSPGRKQCALTLRTPSCHS*GCGRLW Trigger: CCAGAGGCGTCCACATCCCAAACTGTGACAAGAAGG...AGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCATATTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | TTTAGAACAGAGCTGAGAGTTTTTGAAGCTACACTGACCCTGGTGTCTGTCCTTTCCACACTCCCAGCATaGTGCTCCTCCTCGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRTELRVFEATLTLVSVLSTLPA*CSSSDS Trigger: TGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGA...AAGGACAGACACCAGGGTCAGTGTAGCTTCAAAAACTCTCAGCTCTGTTCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
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| CDS-3UTR CAA 90 bp | ATGCCAGGTTCTCCTGGAAGAAAACAGTGTGCTCTAACCCTCAGGACTACTGCGTTGATGACATCCATCTaGGCATGGAGTGGATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MPGSPGRKQCALTLRTTALMTSI*AWSGWN Trigger: GTTCCATCCACTCCATGCCAAGATGGATGTCATCAA...CGCAGTAGTCCTGAGGGTTAGAGCACACTGTTTTCTTCCAGGAGAACCTGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135887.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCCAGACACAGGCTCCTTTCCTTGGGCGTGTCTGCAGTTATATCACCTACTGGGTGTCTGTGCTTaGAGACTCATAGTCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPPDTGSFPWACLQLYHLLGVCA*RLIVNF Trigger: AAAGTTGACTATGAGTCTCAAAGCACAGACACCCAG...TAGGTGATATAACTGCAGACACGCCCAAGGAAAGGAGCCTGTGTCTGGAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020702.11 |
||
| CDS CCA 72 bp | CGGGCTCTCGCACCAGCTCCGTGCACGCGGGCGCGGTaGGCGGAGGCGCGCACTGGGACAGCGCACGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RALAPAPCTRAR*AEARTGTAHAR Trigger: ACGCGCGTGCGCTGTCCCAGTGCGCGCCTCCGCCCACCGCGCCCGCGTGCACGGAGCTGGTGCGAGAGCCCG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
||
| CDS GCA 72 bp | CTGGAGCAGGTTGGGAGGGGAGGTAGGTGCTTAGGCTaGCTGCAGCGCTGGCGTTGGCGCAGAACCCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LEQVGRGGRCLG*LQRWRWRRTRG Trigger: GCCGCGGGTTCTGCGCCAACGCCAGCGCTGCAGGCAGCCTAAGCACCTACCTCCCCTCCCAACCTGCTCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
||
| CDS CCA 72 bp | GGAGGTAGGTGCTTAGGCTGCCTGCAGCGCTGGCGTTaGCGCAGAACCCGCGGCCATTCAGCAGCGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GGRCLGCLQRWR*RRTRGHSAAPS Trigger: TGAGGGCGCTGCTGAATGGCCGCGGGTTCTGCGCCAACGCCAGCGCTGCAGGCAGCCTAAGCACCTACCTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
||
| CDS TCA 72 bp | CCACACTCCCAGCATTGTGCTCCTCCTCGGACTCACTaGTGTTTCCTGGAGCAGGTTGGGAGGGGAGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHSQHCAPPRTH*CFLEQVGRGGR Trigger: CCTACCTCCCCTCCCAACCTGCTCCAGGAAACATCAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
||
| CDS CAA 90 bp | ACTCGGTGTGTGCTGGGGACAACCTGGCTTTCCACACTCCCAGCATaGTGCTCCTCCTCGGACTCACTGATGTTTCCTGGAGCAGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: TRCVLGTTWLSTLPA*CSSSDSLMFPGAGW Trigger: CCAACCTGCTCCAGGAAACATCAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
||
| CDS CCA 72 bp | TTGGAATCGGTCACTCGGTGTGTGCTGGGGACAACCTaGCTTTCCACACTCCCAGCATTGTGCTCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LESVTRCVLGTT*LSTLPALCSSS Trigger: CGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS GCA 72 bp | GGAGTGGATGGAACTTGGAATCGGTCACTCGGTGTGTaGTGGGGACAACCTGGCTTTCCACACTCCCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GVDGTWNRSLGV*WGQPGFPHSQH Trigger: ATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAAGTTCCATCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CCA 72 bp | GCAATGTACGTCGTCTTTCCCCTTGGTGTCGTAGCCTaGCAAGGGCTGCCCATACTTGTCCACACACCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AMYVVFPLGVVA*QGLPILVHTPA Trigger: TGCTGGTGTGTGGACAAGTATGGGCAGCCCTTGCCAGGCTACGACACCAAGGGGAAAGACGACGTACATTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CAA 72 bp | GTGCTGGGGACAACCTGGCTTTCCACACTCCCAGCATaGTGCTCCTCCTCGGACTCACTGATGTTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: VLGTTWLSTLPA*CSSSDSLMFPG Trigger: TCCAGGAAACATCAGTGAGTCCGAGGAGGAGCACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CCA 72 bp | GTGGATGGAACTTGGAATCGGTCACTCGGTGTGTGCTaGGGACAACCTGGCTTTCCACACTCCCAGCATTGT | + |
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Preference number: 6 (lower is better) Translates to: VDGTWNRSLGVC*GQPGFPHSQHC Trigger: ACAATGCTGGGAGTGTGGAAAGCCAGGTTGTCCCCAGCACACACCGAGTGACCGATTCCAAGTTCCATCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CAA 90 bp | TGTCTCCCGCTTAGACTCGGAGGAGAAGTTCTGGGTGTCTGTGCTTaGAGACTCATAGTCAACTTTGTAGCGCTGGCTGTCCCTGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: CLPLRLGGEVLGVCA*RLIVNFVALAVPGV Trigger: CACGCCAGGGACAGCCAGCGCTACAAAGTTGACTATGAGTCTCAAAGCACAGACACCCAGAACTTCTCCTCCGAGTCTAAGCGGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CCA 72 bp | CTGCTTCTTCTTATAGAACCCCTTCTTGTCACAGTTTaGGATGTGGACGCCTCTGGGACTCAGCACATTGAG | + |
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Preference number: 6 (lower is better) Translates to: LLLLIEPLLVTV*DVDASGTQHIE Trigger: CTCAATGTGCTGAGTCCCAGAGGCGTCCACATCCCAAACTGTGACAAGAAGGGGTTCTATAAGAAGAAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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| CDS CAA 72 bp | CTTAGACTCGGAGGAGAAGTTCTGGGTGTCTGTGCTTaGAGACTCATAGTCAACTTTGTAGCGCTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LRLGGEVLGVCA*RLIVNFVALAV Trigger: GACAGCCAGCGCTACAAAGTTGACTATGAGTCTCAAAGCACAGACACCCAGAACTTCTCCTCCGAGTCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020702.11 ENSMUST00000135887.3 |
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