RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF2R (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023830

Ensembl transcript IDs: ENSMUST00000024599.14

Found 444 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTaGGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGG +
Preference number: 1 (lower is better)
Translates to: PQEPPLHRVRERPPG*AAGSHQLARATPRG
Trigger: CCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 90 bp AAACCTGAAGCGCAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTaGGCGAACGCCCGCCTGGGTGAGCTGCTGGGAGTCACCAGCTGG +
Preference number: 1 (lower is better)
Translates to: KPEAQLLPKSLHSTV*ANARLGELLGVTSW
Trigger: CCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTGCGCTTCAGGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 90 bp GCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGAGCTGCTaGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGC +
Preference number: 1 (lower is better)
Translates to: ASTPPCARTPAWVSC*ESPAGKSNTQRDSC
Trigger: GCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 90 bp AGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGAGCTaGTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCG +
Preference number: 1 (lower is better)
Translates to: RASTPPCARTPAWVS*WESPAGKSNTQRDS
Trigger: CGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 90 bp GTGTGCGCGAACGCCCGCCTGGGTGAGCTGCTGGGAGTCACCAGCTaGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGCAACT +
Preference number: 1 (lower is better)
Translates to: VCANARLGELLGVTS*QEQHPEGFVQRAAT
Trigger: AGTTGCAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 90 bp AATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTaGCCTAGCACAGCCCCTACACCAACACTGGCCCTACACCAACAC +
Preference number: 1 (lower is better)
Translates to: NPQPVDWACPSILGH*PSTAPTPTLALHQH
Trigger: GTGTTGGTGTAGGGCCAGTGTTGGTGTAGGGGCTGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 90 bp CACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTaGAACTACAGAGATGAGGTAGGGCACGGAGCAGGTGGGCCTTCC +
Preference number: 1 (lower is better)
Translates to: HQLARATPRGIRAKS*NYRDEVGHGAGGPS
Trigger: GGAAGGCCCACCTGCTCCGTGCCCTACCTCATCTCTGTAGTTGCAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 90 bp TGGCTTGGGCACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTaGGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGG +
Preference number: 1 (lower is better)
Translates to: WLGHLLEAHSSYDRK*GLGANPWARSTALW
Trigger: CCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 90 bp TACTGCAGCTCACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATaGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATGCCCTTG +
Preference number: 1 (lower is better)
Translates to: YCSSLSVHQGPVQEP*TTAPADGQLHLMPL
Trigger: CAAGGGCATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGTGAGCTGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 90 bp CATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTaGAGCTCACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGG +
Preference number: 1 (lower is better)
Translates to: HVCVPSQNAKRRIEY*SSLSVHQGPVQEPW
Trigger: CCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGTGAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 90 bp TATGTAAATGCCACCTATATACAACTCTATAATGTGACAAGTCACTaGACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGC +
Preference number: 1 (lower is better)
Translates to: YVNATYIQLYNVTSH*THQEKNPQPVDWAC
Trigger: GCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTTGTCACATTATAGAGTTGTATATAGGTGGCATTTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 90 bp ATTACAGAAACTCTTCCCTTTGAAGCAGTTTTGTTAAAGGCAAAATaGCAGACGCATCATCGAGCTGAAGTCTTATTTGGTTGGAGGTGC +
Preference number: 1 (lower is better)
Translates to: ITETLPFEAVLLKAK*QTHHRAEVLFGWRC
Trigger: GCACCTCCAACCAAATAAGACTTCAGCTCGATGATGCGTCTGTCATTTTGCCTTTAACAAAACTGCTTCAAAGGGAAGAGTTTCTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGAAGTCTTATTTGGTTaGAGGTGCTTGGCTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QLLPKSLHSTVCANARLGEVLFG*RCLAVH
Trigger: ATGGACAGCCAAGCACCTCCAACCAAATAAGACTTC...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCTTGGGGCAAACCCCTaGGCACGAAGTACCGCCCTT +
Preference number: 2 (lower is better)
Translates to: EKNPQPVDWACPSILGHCLGANP*ARSTAL
Trigger: AAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAG...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGAGGGCACGGAGCAGGTaGGCCTTCCCAAACCTAGGC +
Preference number: 2 (lower is better)
Translates to: WESPAGKSNTQRDSCKELRARSR*AFPNLG
Trigger: GCCTAGGTTTGGGAAGGCCCACCTGCTCCGTGCCCT...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR GCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTTTCACCTTATGCCCTTaGTGGCAAAAGAAACTGGTT +
Preference number: 2 (lower is better)
Translates to: QLLPKSLHSTVCANARLGFTLCP*WQKKLV
Trigger: AACCAGTTTCTTTTGCCAGCAAGGGCATAAGGTGAA...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR GCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCTTATTTGGTTGGAGGTaGTTGGCTGTCCATGGCTCC +
Preference number: 2 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFLFGWR*LAVHGS
Trigger: GGAGCCATGGACAGCCAAGCACCTCCAACCAAATAA...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAACGATCATGAAGGAGTaGTGCCCACCTCCCCCATCC +
Preference number: 2 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTTIMKE*CPPPPS
Trigger: GGATGGGGGAGGTGGGCACCACTCCTTCATGATCGT...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR GCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGCTGTGCATGTGTGTGTaGCCTCACAAAATGCAAAGC +
Preference number: 2 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLLCMCV*PHKMQS
Trigger: GCTTTGCATTTTGTGAGGGCACACACACATGCACAG...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACATTGGTTGGAGGTGCTTaGCTGTCCATGGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTLVGGA*LSMAPP
Trigger: AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAA...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR TCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCTTGTTAAAGGCAAAATaGCAGACGCATCATCGAGCT +
Preference number: 2 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFLLKAK*QTHHRA
Trigger: AGCTCGATGATGCGTCTGTCATTTTGCCTTTAACAA...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR TCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCGGCACTATGAGACCCTaGAGAGATGAGACCTACAGC +
Preference number: 2 (lower is better)
Translates to: KSLNTSRKESTASGLGLPGTMRP*RDETYS
Trigger: GCTGTAGGTCTCATCTCTTCAGGGTCTCATAGTGCC...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCACCTTATGCCCTTGCTaGCAAAAGAAACTGGTTTTG +
Preference number: 2 (lower is better)
Translates to: EKNPQPVDWACPSILGHCTLCPC*QKKLVL
Trigger: CAAAACCAGTTTCTTTTGCCAGCAAGGGCATAAGGT...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR TCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGAGAAACTCTTCCCTTTaGAGCAGTTTTGTTAAAGGC +
Preference number: 2 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLRNSSL*SSFVKG
Trigger: GCCTTTAACAAAACTGCTTCAAAGGGAAGAGTTTCT...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR GCA 90 bp AGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTATGTGCCCTCACAAAATaGAAAGCGAAGAATAGAATA +
Preference number: 2 (lower is better)
Translates to: RIHSQWTGPALPSWDTALCALTK*KAKNRI
Trigger: TATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACA...TAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR TCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCGACGCATCATCGAGCTaGAGTCTTATTTGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: KSLNTSRKESTASGLGLPDASSS*SLIWLE
Trigger: CTCCAACCAAATAAGACTTCAGCTCGATGATGCGTC...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 72 bp ACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGAGCTaGTGGGAGTCACCAGCTGGCAAGAGCAACACCCAG +
Preference number: 3 (lower is better)
Translates to: TPPCARTPAWVS*WESPAGKSNTQ
Trigger: CTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTTCGCGCACACGGTGGAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 72 bp ATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTaGGACACTGCCCTAGCACAGCCCCTACACCAACAC +
Preference number: 3 (lower is better)
Translates to: IHSQWTGPALPS*DTALAQPLHQH
Trigger: GTGTTGGTGTAGGGGCTGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 72 bp AACGCCCGCCTGGGTGAGCTGCTGGGAGTCACCAGCTaGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: NARLGELLGVTS*QEQHPEGFVQR
Trigger: TCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCGGGCGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CAA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCTTTGGTTGGAGGTGCTaGGCTGTCCATGGCTCCACC +
Preference number: 3 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSFGWRC*AVHGST
Trigger: GGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAA...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 72 bp CATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTaGCCTTCCATCCTGGGACACTGCCCTAGCACAGCC +
Preference number: 3 (lower is better)
Translates to: HQEKNPQPVDWA*PSILGHCPSTA
Trigger: GGCTGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp CAGAGGGATTCGTGCAAAGAGCTGCAACTACAGAGATaGGGTAGGGCACGGAGCAGGTGGGCCTTCCCAAAC +
Preference number: 3 (lower is better)
Translates to: QRDSCKELQLQR*GRARSRWAFPN
Trigger: GTTTGGGAAGGCCCACCTGCTCCGTGCCCTACCTCATCTCTGTAGTTGCAGCTCTTTGCACGAATCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 72 bp TCACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATaGACAACGGCTCCGGCAGACGGCCAGCTTCACCTT +
Preference number: 3 (lower is better)
Translates to: SLSVHQGPVQEP*TTAPADGQLHL
Trigger: AAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CAA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGGAGCTGAAGTCTTATTaGGTTGGAGGTGCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLELKSY*VGGAWL
Trigger: CAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTC...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp CACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTaGGGACTTGGGGCAAACCCCTGGGCACGAAGTACC +
Preference number: 3 (lower is better)
Translates to: HLLEAHSSYDRK*GLGANPWARST
Trigger: GGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 72 bp GCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTaGAACTACAGAGATGAGGTAGGGCACGGAGCAGGT +
Preference number: 3 (lower is better)
Translates to: ARATPRGIRAKS*NYRDEVGHGAG
Trigger: ACCTGCTCCGTGCCCTACCTCATCTCTGTAGTTGCAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CCA 72 bp CTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTaGCCGATTCAAGCAACACCTTGTTCCATTGACTGT +
Preference number: 3 (lower is better)
Translates to: LGANPWARSTAL*PIQATPCSIDC
Trigger: ACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR GCA 72 bp ACGCATCATCGAGCTGAAGTCTTATTTGGTTGGAGGTaGTTGGCTGTCCATGGCTCCACCTTCTTCTGTAGG +
Preference number: 3 (lower is better)
Translates to: THHRAEVLFGWR*LAVHGSTFFCR
Trigger: CCTACAGAAGAAGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGATGATGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp AGCAAAAAGCACAGTAAAGGTGGCACTATGAGACCCTaGAGAGATGAGACCTACAGCTCAAACCTGAAGCGC +
Preference number: 3 (lower is better)
Translates to: SKKHSKGGTMRP*RDETYSSNLKR
Trigger: GCGCTTCAGGTTTGAGCTGTAGGTCTCATCTCTTCAGGGTCTCATAGTGCCACCTTTACTGTGCTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR-3UTR CAA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTTGGCTTGGGCACCTGTaGGAAGCACACAGCAGCTAT +
Preference number: 3 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFWLGHL*EAHSSY
Trigger: ATAGCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCA...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp TTTGTTAAAGGCAAAATGACAGACGCATCATCGAGCTaGAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: FVKGKMTDASSS*SLIWLEVLGCP
Trigger: TGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGATGATGCGTCTGTCATTTTGCCTTTAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp GCCACCTATATACAACTCTATAATGTGACAAGTCACTaGACACATCAAGAAAAGAATCCACAGCCAGTGGAC +
Preference number: 3 (lower is better)
Translates to: ATYIQLYNVTSH*THQEKNPQPVD
Trigger: GTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTTGTCACATTATAGAGTTGTATATAGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR TCA 72 bp ACTCTTCCCTTTGAAGCAGTTTTGTTAAAGGCAAAATaGCAGACGCATCATCGAGCTGAAGTCTTATTTGGT +
Preference number: 3 (lower is better)
Translates to: TLPFEAVLLKAK*QTHHRAEVLFG
Trigger: ACCAAATAAGACTTCAGCTCGATGATGCGTCTGTCATTTTGCCTTTAACAAAACTGCTTCAAAGGGAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGGTGAGCCCGACGTCTaGGCACACTCGAACACGATC +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGGEPDV*AHSNTI
Trigger: GATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCACC...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTTGTCTCCTTCCTCTCTaGTCACAGGGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGCLLPL*SQGRPP
Trigger: TGGAGGCCTGCCCTGTGATCAGAGAGGAAGGAGACA...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTAGACACCGCCATCCTTaGAGCCTTCCTGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGRHRHP*SLPGLS
Trigger: GCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCT...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGGCCATCACTGGTGGTaGAAGCAGAGCCGTTCACAT +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGGHHWW*KQSRSH
Trigger: ATGTGAACGGCTCTGCTTGCACCACCAGTGATGGCC...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTATATCGATCGCAGCCTaGCACAGGATTCAGAGGCCG +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGISIAA*HRIQRP
Trigger: CGGCCTCTGAATCCTGTGCCAGGCTGCGATCGATAT...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTTCACCGCCTTGGTGGTaGTATGGCCATTTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGSPPWW*YGHFLA
Trigger: GGCAAGAAAATGGCCATATCACCACCAAGGCGGTGA...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACACAGTGGCCCCTGTCCTaGTCACAGCCTCCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTQWPLS*SQPPSC
Trigger: ACAACTGGGAGGCTGTGACCAGGACAGGGGCCACTG...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACAGCAGGCCCCCGAGTTTaGCTGACAAGGATCCATGGA +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTAGPRV*LTRIHG
Trigger: TCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGC...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CGCCTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGACGCCCGAGCTTCTTCTaGAGCAGCTGGTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: RLGELLGVTSWQEQHPEGRPSFF*SSWSAC
Trigger: ACAAGCTGACCAGCTGCTGCAGAAGAAGCTCGGGCG...TCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTAGTCCTGCCACTTTCTaGAATCCCTGTGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGSPATF*NPCGPF
Trigger: GAAAGGACCACAGGGATTCCAGAAAGTGGCAGGACT...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CGCCTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGACCTTGTAGGTCAGAGTaGGGAATCCCTCGGCAGACA +
Preference number: 4 (lower is better)
Translates to: RLGELLGVTSWQEQHPEGPCRSE*GIPRQT
Trigger: TGTCTGCCGAGGGATTCCTCACTCTGACCTACAAGG...TCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCCAGTCCATGGCTTCCTaGCCATGCTCAGGGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSQSMAS*PCSGRS
Trigger: TGAGCGCCCTGAGCATGGTCAGGAAGCCATGGACTG...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGATGGATACAGTCTCTaGCAAGGAGCCCTCATGATT +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGDGYSL*QGALMI
Trigger: AATCATGAGGGCTCCTTGGCAGAGACTGTATCCATC...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACACTCGTGGCTGAACTCTaGGATCCCATCCTTCACCAG +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTLVAEL*DPILHQ
Trigger: CTGGTGAAGGATGGGATCCCAGAGTTCAGCCACGAG...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTGAAGAAATACTTTTCTaGTTCTGCCTGGCTGCCATC +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGEEILF*FCLAAI
Trigger: GATGGCAGCCAGGCAGAATCAGAAAAGTATTTCTTC...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp AGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTACCTCCTCTTCCCGTATaGAGACGTGTCCACGGCAGT +
Preference number: 4 (lower is better)
Translates to: RIHSQWTGPALPSWDTALPPLPV*RRVHGS
Trigger: ACTGCCGTGGACACGTCTGCATACGGGAAGAGGAGG...TAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACACTGGGCAGGCATAACTaGTGTACCACCGGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTLGRHN*CTTGSC
Trigger: ACAACTTCCGGTGGTACACCAGTTATGCCTGCCCAG...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCACAAACAGCTGCCTCTaGAGGGCATGGCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFTNSCL*RAWLCA
Trigger: GGCACAGAGCCATGCCCTCCAGAGGCAGCTGTTTGT...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAAGGGCACTCCGTGCATaGGATTCAGTGGCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: RIHSQWTGPALPSWDTALRALRA*DSVAGR
Trigger: TCTGCCAGCCACTGAATCCCATGCACGGAGTGCCCT...TAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCCATGCTGCTCACTGCTaGGGGAGCAGCTCTCACTTT +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFHAAHC*GSSSHF
Trigger: AAAGTGAGAGCTGCTCCCTCAGCAGTGAGCAGCATG...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATAGTCCACCTCACCTGTaGACACAGGCTCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYSPPHL*TQALLS
Trigger: GGAGAGGAGAGCCTGTGTTCACAGGTGAGGTGGACT...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCGCTCCTCGGCCTGAGTaGACTTTCACCTCTGGAACG +
Preference number: 4 (lower is better)
Translates to: EKNPQPVDWACPSILGHCAPRPE*TFTSGT
Trigger: CGTTCCAGAGGTGAAAGTTCACTCAGGCCGAGGAGC...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCGAACGAGCCTGTCCTTaGTCAACAGCTTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFERACP*STASAP
Trigger: AGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGTTC...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CAGCTCCTCCCCAAGAGCCTCCACTCCACCGTGTGCGCGAACGCCCGCCTGGGTTCTCCCATCCTTACCTaGAGTTTTGTTGCACTCAAA +
Preference number: 4 (lower is better)
Translates to: QLLPKSLHSTVCANARLGSPILT*SFVALK
Trigger: TTTGAGTGCAACAAAACTGCAGGTAAGGATGGGAGA...ACCCAGGCGGGCGTTCGCGCACACGGTGGAGTGGAGGCTCTTGGGGAGGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGGGAAGGACACCAGCTTaGCAGGGGCTGTTGGCTTGC +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELGRTPA*QGLLAC
Trigger: GCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCC...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCAGCGTTTCTTGCCATTaGTGGCCCCGCAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSSVSCH*WPRRGG
Trigger: ACCTCCTCTGCGGGGCCATCAATGGCAAGAAACGCT...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAAGTCCCAGGACCCCGTaGGGGATGAGAGCAGTCGCA +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTSPRTP*GMRAVA
Trigger: TGCGACTGCTCTCATCCCTCACGGGGTCCTGGGACT...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCAGGGGTCTGTCACCATaGACTCCAGGGGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: EKNPQPVDWACPSILGHCRGLSP*TPGVLL
Trigger: CAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCT...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCAGCCAGCTGCTGCTGTaGACACCCCTATACTGTATG +
Preference number: 4 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFSQLLL*TPLYCM
Trigger: CATACAGTATAGGGGTGTGCACAGCAGCAGCTGGCT...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGAGCTGTTGGTCTGTCTaGAGAAGCCCCACTCGTGGT +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLSCWSV*RSPTRG
Trigger: ACCACGAGTGGGGCTTCTGCAGACAGACCAACAGCT...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACATTTATACTCTGGCCCTaGGCTCTCATCCTCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTFILWP*ALILKV
Trigger: GACTTTGAGGATGAGAGCGCAGGGCCAGAGTATAAA...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CGCCTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGACTTCTCTCCTTCTTATaGAGCAGTAAGGCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLGELLGVTSWQEQHPEGLLSFL*SSKASK
Trigger: CTTGCTGGCCTTACTGCTGCATAAGAAGGAGAGAAG...TCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCCTCTTCCTGATATTCTaGGAAGCCCACTCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFLFLIF*EAHSSV
Trigger: GACGCTGGAGTGGGCTTCCCAGAATATCAGGAAGAG...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCCTCCAGGGGTTCTTCTaGGCAGGCATAACTGGTGTA +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSLQGFF*AGITGV
Trigger: TACACCAGTTATGCCTGCCCAGAAGAACCCCTGGAG...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACTGGTGGAGAAGCGCTaGTCCCCACATCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRLVEKR*SPHLSP
Trigger: TGGGGACAGATGTGGGGACCAGCGCTTCTCCACCAG...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATGTGAGGAGAGGTCAATaGAGTTGCCAGCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYVRRGQ*SCQPHP
Trigger: AGGATGCGGCTGGCAACTCCATTGACCTCTCCTCAC...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGCTTGGGGCTGGCACCTaGATCTCTTCCATCAGCCAT +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLLGAGT*ISSISH
Trigger: ATGGCTGATGGAAGAGATCCAGGTGCCAGCCCCAAG...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACTTGGCAGGGGCTGTTaGCTTGCGCTGTCCGGGTCT +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTLGRGC*LALSGS
Trigger: AGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAG...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCTCGTCGCTGTCATCATaGAAGGACACCAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSSSLSS*KDTSLA
Trigger: TGCCAAGCTGGTGTCCTTCCATGATGACAGCGACGA...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGGAGGCCGACACACATTaGGGTAGTATTTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLEADTH*GSISSV
Trigger: CACGGAGGAAATACTACCTCAATGTGTGTCGGCCTC...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACATTAATATCTTCTATCTaGGTTTCGGCCTCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTLISSI*VSASQP
Trigger: TGGCTGCGAGGCCGAAACTCAGATAGAAGATATTAA...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAGGACCCCGTGAGGGATaGGAGCAGTCGCAAGTCATA +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRGPREG*EQSQVI
Trigger: TATGACTTGCGACTGCTCTCATCCCTCACGGGGTCC...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATCTGATTCTGCCTGGCTaGCATCCACTGCTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYLILPG*HPLLPN
Trigger: ATTGGGAAGCAGTGGATGGCAGCCAGGCAGAATCAG...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCAAGAGTGTGCACGTCTaGTTGTCCAAGGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFKSVHV*LSKEMS
Trigger: GCTCATCTCCTTGGACAAGCAGACGTGCACACTCTT...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGTTTCTTGCCCGTCCTTaGCTAGTCTTGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELFLARP*LVLGLA
Trigger: TGCCAGCCCCAAGACTAGGCAAGGACGGGCAAGAAA...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACACAGACTTCACTAGACTaGAGAGGTCATACTGTTCCA +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTQTSLD*RGHTVP
Trigger: TGGAACAGTATGACCTCTCCAGTCTAGTGAAGTCTG...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCCCTGATGCAGGAATTTaGGGGCTCCTGGGTAAATGT +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFPDAGI*GLLGKC
Trigger: ACATTTACCCAGGAGCCCCCAAATTCCTGCATCAGG...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATGAGTTGTCCTCTTCCTaGTATTCTGGGAAGCCCACT +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYELSSS*YSGKPT
Trigger: AGTGGGCTTCCCAGAATATCAGGAAGAGGACAACTC...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCACTCCTCTCTTGCAGTaGAATGTGATGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSTPLLQ*NVMSEV
Trigger: CACCTCACTCATCACATTTCACTGCAAGAGAGGAGT...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTGTTTCTCAGGGGCTGTaGGCTTTCCACCTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPVSQGL*AFHLRS
Trigger: GGAGCGGAGGTGGAAAGCTCACAGCCCCTGAGAAAC...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACATCAATAGTAATATCATaGTGCTCACTGCTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTSIVIS*CSLLRE
Trigger: CTCCCTCAGCAGTGAGCAGCATGATATTACTATTGA...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCCATCTGGCAAGCAGATaGATATCGATCGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSHLASR*ISIAAW
Trigger: CCAGGCTGCGATCGATATGCATCTGCTTGCCAGATG...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGGTCAAACCTCTTGAATaGAGGCCTGCCCACAGTCTT +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLVKPLE*RPAHSL
Trigger: AAGACTGTGGGCAGGCCTGCATTCAAGAGGTTTGAC...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGTTTCCTTCAGGACCTTaGGCTGTGGGTTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELFPSGP*AVGFSG
Trigger: CCCTGAGAAACCCACAGCGCAAGGTCCTGAAGGAAA...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCCCAACGTCAAATGCCTaGTTCCCCTTCAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSPTSNA*FPFSRQ
Trigger: CTGTCTGCTGAAGGGGAACCAGGCATTTGACGTTGG...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAGCTTCAGCCCCTCCTTaGGTCGGCCAACGTCAAATG +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTASAPP*VGQRQM
Trigger: CATTTGACGTTGGCCGACCCAAGGAGGGGCTGAAGC...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCCTCTCTCCGCTCAGATaGGCACACAAATGTTACTGT +
Preference number: 4 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFLSPLR*AHKCYC
Trigger: ACAGTAACATTTGTGTGCCCATCTGAGCGGAGAGAG...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCCGAACACGATCCTGGTaGAGAAGCGCTGGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPRTRSW*RSAGPH
Trigger: GTGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCG...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACAAGTGGAAGAAGATGGTaGAAGAAACAGACTTGGTCT +
Preference number: 4 (lower is better)
Translates to: PQPVDWACPSILGHCPSTSGRRW*KKQTWS
Trigger: AGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACT...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CAA 72 bp TGGAAGCACACAGCAGCTATGATCGTAAGTGAGGACTaGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: WKHTAAMIVSED*GQTPGHEVPPF
Trigger: AAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATGTCTTCCTGCTATTTTaGCTTGAGTGGAATCCGCCT +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYVFLLF*LEWNPP
Trigger: AGGCGGATTCCACTCAAGTCAAAATAGCAGGAAGAC...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAGCCCCCGAGTTTGACTaGCAAGGATCCATGGATACA +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRAPEFD*QGSMDT
Trigger: TGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGC...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCCAAGGAGCCCTCATaGTTTTCATATTTCATCTGG +
Preference number: 4 (lower is better)
Translates to: RIHSQWTGPALPSWDTALAKEPS*FSYFIW
Trigger: CCAGATGAAATATGAAAATCATGAGGGCTCCTTGGC...TAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATCAACTCCCAAGTTACTaGTGGATACAGTCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYQLPSY*WIQSLP
Trigger: TGGCAGAGACTGTATCCATCAGTAACTTGGGAGTTG...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCCCATTTCCAGTAGCTTaGGGACTGATCTGCACCACA +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSPFPVA*GLICTT
Trigger: TGTGGTGCAGATCAGTCCTCAAGCTACTGGAAATGG...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTCTTGTACCTCAGGTCTaGCAGGGAAGGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPLVPQV*QGRAWG
Trigger: TCCCCATGCCCTTCCCTGTCAGACCTGAGGTACAAG...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGTGCCTACTTTCCTGCTaGAATGCTGGTCATTGGGCT +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELCLLSC*NAGHWA
Trigger: AGCCCAATGACCAGCATTTCAGCAGGAAAGTAGGCA...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGATCAAAGGAAAACCCTaGCTGGGCATCAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELIKGKP*LGIKDR
Trigger: ACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGAT...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCTACGAGTTTCCTTCATaGACAAAGTCCCAGGACCCC +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSYEFPS*TKSQDP
Trigger: GGGGTCCTGGGACTTTGTGCATGAAGGAAACTCGTA...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATACTTTCCTGCTGAAATaGTGGTCATTGGGCTTCACC +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYTFLLK*WSLGFT
Trigger: GGTGAAGCCCAATGACCAGCATTTCAGCAGGAAAGT...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCGTGCATGGGATTCAGTaGCTGGCAGATGTTGATATA +
Preference number: 4 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFVHGIQ*LADVDI
Trigger: TATATCAACATCTGCCAGCCACTGAATCCCATGCAC...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTTCCTTGCAGCCTTCCTaGCCTAAGCCAGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPSLQPS*PKPAAA
Trigger: AGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGA...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTTCATCCTCACTGTCCTaGTCGTCCCCATGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPSSSLS*SSPCRD
Trigger: GTCCCTGCATGGGGACGACCAGGACAGTGAGGATGA...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTGTCACTGCAGGGCTGTaGCCATTACAGAAGTCTGGC +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPVTAGL*PLQKSG
Trigger: GCCAGACTTCTGTAATGGTCACAGCCCTGCAGTGAC...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGGTGTACTCACAGTCCTaGACAGCACTGATGAAAAGG +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELVYSQS*TALMKR
Trigger: CCTTTTCATCAGTGCTGTTCAGGACTGTGAGTACAC...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAGGTAAGAAGAGCTGGTaGTGGAGGAGAGCTGGATTT +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRGKKSW*WRRAGF
Trigger: AAATCCAGCTCTCCTCCATCACCAGCTCTTCTTACC...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCAATGCACACAGTCTGTaGCAGTTACAAATTCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSNAHSL*QLQIQE
Trigger: CTCCTGAATTTGTAACTGCCACAGACTGTGTGCATT...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp TGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCGTGCAAAGAGCTGGGTCCTTTCTTTTCCTaGCATGATGAGACTGCCTTG +
Preference number: 4 (lower is better)
Translates to: WESPAGKSNTQRDSCKELGPFFS*HDETAL
Trigger: CAAGGCAGTCTCATCATGCCAGGAAAAGAAAGGACC...CAGCTCTTTGCACGAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAGCCATCATCCGTTTCTaGAGGGCAAGGATCACCATT +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRAIIRF*RARITI
Trigger: AATGGTGATCCTTGCCCTCCAGAAACGGATGATGGC...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGGCACTCCATCTTCTTTaGAGGGCAGACAACTTTTGT +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLALHLL*RADNFC
Trigger: ACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGC...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATTCTTCTTGCAAATGCTaGCTCTTTCAGAGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYSSCKC*LFQSSP
Trigger: TGGACTGCTCTGAAAGAGCCAGCATTTGCAAGAAGA...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCTGCACTCAAAGTTTATaGCACTCATCCTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSCTQSL*HSSSGS
Trigger: GCTTCCAGAGGATGAGTGTCATAAACTTTGAGTGCA...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAAACACTCTGTCACATTaGAAGGTGGGCAGGCATACT +
Preference number: 4 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRNTLSH*KVGRHT
Trigger: AGTATGCCTGCCCACCTTTCAATGTGACAGAGTGTT...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCATAGTAATATCATGCTaGTCACTGCTGAGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSIVISC*SLLREQ
Trigger: CTGCTCCCTCAGCAGTGAGCAGCATGATATTACTAT...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGGTTCTGGTGTCTTCCTaGTATTTTGACTTGAGTGGA +
Preference number: 4 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLVLVSS*YFDLSG
Trigger: TCCACTCAAGTCAAAATAGCAGGAAGACACCAGAAC...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCTGGAAGAAACAGACTTaGTCTTATCTTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSWKKQT*SYLSHT
Trigger: AGTGTGGGAAAGATAAGACCAAGTCTGTTTCTTCCA...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAGTGAACTTTCACCTCTaGAACGGTCAGGACCTCATC +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTVNFHL*NGQDLI
Trigger: GATGAGGTCCTGACCGTTCCAGAGGTGAAAGTTCAC...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTGGCAGGCATACTCGGTaGTCCACTCAACTTCATAAC +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPGRHTR*STQLHN
Trigger: GTTATGAAGTTGAGTGGATCACCGAGTATGCCTGCC...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCGCTGGGTCAGTCACTTaGCAATCCACTAGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPAGSVT*QSTREG
Trigger: TCCTTCTCTAGTGGATTGTCAAGTGACTGACCCAGC...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTAGGAGAAGAAGAGTGTaGACGTCTGCTTGTCCAAGG +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPRRRRV*TSACPR
Trigger: CCTTGGACAAGCAGACGTGCACACTCTTCTTCTCCT...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATGTCACGATCATAATTTaGAGTTTTGCTACACCACAG +
Preference number: 4 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYVTIII*SFATPQ
Trigger: CTGTGGTGTAGCAAAACTGCAAATTATGATCGTGAC...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCATCAAATGCATAGCATaGTACCTCCTTATCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFIKCIA*YLLISF
Trigger: AAAGCTGATAAGGAGGTACCATGCTATGCATTTGAT...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCACACAAACCCACTGCTaGGGTCCCTTATTGAGCAAG +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPTQTHC*GPLLSK
Trigger: CTTGCTCAATAAGGGACCCCAGCAGTGGGTTTGTGT...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GGCACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTGAGGACTTGGGGCAATTCCTTCAGAAACACTaGCTTCTGTGTAGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: GTCWKHTAAMIVSEDLGQFLQKH*LLCSPV
Trigger: GACCGGACTACACAGAAGCCAGTGTTTCTGAAGGAA...TTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACTTCTTCGTGAGGAGTaGCAAATCAAAGGAAAACCC +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTLLREE*QIKGKP
Trigger: GGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAG...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCTGTCTCAACTTTATATaGACCATTCTTCTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: EKNPQPVDWACPSILGHCCLNFI*TILLRE
Trigger: CTCACGAAGAAGAATGGTGCATATAAAGTTGAGACA...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCCATTGTTATAGGGAGTaGCGTTCCTGTAGCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPHCYRE*RSCSSA
Trigger: AGCTGAGCTACAGGAACGGCACTCCCTATAACAATG...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCAATGTAATGCTAGTCTaGATTCTGTGCTGTGAATCT +
Preference number: 4 (lower is better)
Translates to: EKNPQPVDWACPSILGHCNVMLV*ILCCES
Trigger: AGATTCACAGCACAGAATCCAGACTAGCATTACATT...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAAACTCGAACACGATCCTaGTGGAGAAGCGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHETRTRS*WRSAGP
Trigger: GGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGT...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACATTTCTGGAATCCCTGTaGTCCTTTCTTTTCCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTFLESL*SFLFLA
Trigger: TGCCAGGAAAAGAAAGGACCACAGGGATTCCAGAAA...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACACAGCAGCAGAAATAGATGGTTGTaGAGCGCTGATACACCTTAT +
Preference number: 4 (lower is better)
Translates to: PSVVRCMWLGHLLEAHSSRNRWL*SADTPY
Trigger: ATAAGGTGTATCAGCGCTCCACAACCATCTATTTCT...GCTGCTGTGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGATTCCCTTTGTATACTCTTTaGCACAGATTGATAAAGTAC +
Preference number: 4 (lower is better)
Translates to: LGELLGVTSWQEQHPEGFPLYTL*HRLIKY
Trigger: GTACTTTATCAATCTGTGCCAAAGAGTATACAAAGG...GAATCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAAGCGTTCCGTTCACCATaGTCACCTCCTGAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHEAFRSP*SPPEAS
Trigger: TGAGGCCTCAGGAGGTGACCATGGTGAACGGAACGC...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
3UTR CAA 72 bp CAAAATGACAGACGCATCATCGAGCTGAAGTCTTATTaGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: QNDRRIIELKSY*VGGAWLSMAPP
Trigger: AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGATGATGCGTCTGTCATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTGGGCAGGGCACTCCGTaGATGGGATTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFGQGTP*MGFSGW
Trigger: CCAGCCACTGAATCCCATGCACGGAGTGCCCTGCCC...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCATCCAGCTGCATCGATaGAAGGCGCCCAAAAGAAGC +
Preference number: 4 (lower is better)
Translates to: ACVCALTKCKAKNRILQLIQLHR*KAPKRS
Trigger: GCTTCTTTTGGGCGCCTTGCATCGATGCAGCTGGAT...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAATTCCAGGAGTGATCTaGCTGAACTTCTCAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTIPGVI*LNFSKV
Trigger: CACTTTTGAGAAGTTCAGCCAGATCACTCCTGGAAT...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTCCCTCGGCAGACAACTaGAGGCTCCTCTCCATCCCG +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFPSADN*RLLSIP
Trigger: CGGGATGGAGAGGAGCCTCCAGTTGTCTGCCGAGGG...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCACTCCGCTCCTCGGCCTaGGTGAACTTTCACCTCTGG +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAALRSSA*VNFHLW
Trigger: CCAGAGGTGAAAGTTCACTCAGGCCGAGGAGCGGAG...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCCTTATTGAGCAAGCCTaGTCTGTTTCTGTGATTGTC +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPLIEQA*SVSVIV
Trigger: GACAATCACAGAAACAGACCAGGCTTGCTCAATAAG...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCCACAGTAGAAATAGATaGTTGTGGAGCGCTGATACA +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPHSRNR*LWSADT
Trigger: TGTATCAGCGCTCCACAACCATCTATTTCTACTGTG...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCAGCCACCATTTAGCTTaGTCAGTGGGTTTAAATCAT +
Preference number: 4 (lower is better)
Translates to: KSLNTSRKESTASGLGLPSHHLA*SVGLNH
Trigger: ATGATTTAAACCCACTGATCAAGCTAAATGGTGGCT...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTCCTCACAGATGCTCATaGAGACCAGCCCCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFPHRCS*RPAPSR
Trigger: GCGAGAAGGGGCTGGTCTTCATGAGCATCTGTGAGG...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAAGGAACTTTGCATACTaGGGCACCTGCAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAARNFAY*GTCRAG
Trigger: CCCTGCCCTGCAGGTGCCTCAGTATGCAAAGTTCCT...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTTGCGCTGTCCGGGTCTaGACTTCCCTTTTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFCAVRV*TSLFWP
Trigger: AGGCCAGAAAAGGGAAGTTCAGACCCGGACAGCGCA...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCAAAACGGATGATGAATaGTGTGCCTCTGTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: ACVCALTKCKAKNRILQLKTDDE*CASVRG
Trigger: CCCTCTGACAGAGGCACAGCATTCATCATCCGTTTT...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCTGTCACATTGAAAGGTaGGCAGGCATACTGTGTTCG +
Preference number: 4 (lower is better)
Translates to: ACVCALTKCKAKNRILQLCHIER*AGILCS
Trigger: CGAACACAGTATGCCTGCCCACCTTTCAATGTGACA...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAACTGGGGTTGGTGACTTaGCAGTCATCATGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHELGLVT*QSSCVL
Trigger: CAACACACATGATGACTGCCAAGTCACCAACCCCAG...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTCATTTCCACAGACGTTaGTCTTATAAACTGCATTGT +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPHFHRR*SYKLHC
Trigger: ACAATGCAGTTTATAAGATCAACGTCTGTGGAAATG...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAATCCGCCTTTTTCTCTTaGCAAACAGCAGCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHESAFFS*QTAASL
Trigger: CAAAGAGGCTGCTGTTTGTCAAGAGAAAAAGGCGGA...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAAGTGGGTTTAAATCATaGTTCTGTAACTTGTCATCA +
Preference number: 4 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTSGFKS*FCNLSS
Trigger: TGATGACAAGTTACAGAAGCATGATTTAAACCCACT...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTACTCTAAGAGGAGGCTaGCACTCTCCTCCACCACAG +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFTLRGG*HSPPPQ
Trigger: CTGTGGTGGAGGAGAGTGGCAGCCTCCTCTTAGAGT...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTAGGAGTACAAGCCAATaGAGTTTCAAACTCAAAGTA +
Preference number: 4 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPRSTSQ*SFKLKV
Trigger: TACTTTGAGTTTGAAACTGCATTGGCTTGTACTCCT...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAATCAGGTCATACAAATTaGCATGCCTGGGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHESGHTN*HAWGPS
Trigger: TGAAGGACCCCAGGCATGGCAATTTGTATGACCTGA...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAACAGTGGCACTCTTCTTaGAAATGCTGGCTCTTTCAG +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHEQWHSS*KCWLFQ
Trigger: CTGAAAGAGCCAGCATTTGCAAGAAGAGTGCCACTG...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAATCACATAACTCAGAATaGCTGCTTCATCTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHESHNSE*LLHLGA
Trigger: GGCACCAAGATGAAGCAGTCATTCTGAGTTATGTGA...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTCTCCTTGCTGACCTTTaGGTACTTGTAGGACACGCC +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFLLADL*VLVGHA
Trigger: GGCGTGTCCTACAAGTACTCAAAGGTCAGCAAGGAG...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAACAAATTGCCATGCCTaGGGTCCTTCACCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAATNCHA*GPSPGS
Trigger: ACTGCCAGGTGAAGGACCCCAGGCATGGCAATTTGT...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTGAGTCCTTTATACTCTaGCCCTGCGCTCTCATCCTC +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFESFIL*PCALIL
Trigger: GAGGATGAGAGCGCAGGGCCAGAGTATAAAGGACTC...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTGCCTTGGTGGTGATATaGCCATTTTCTTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFALVVI*PFSCPS
Trigger: GGACGGGCAAGAAAATGGCCATATCACCACCAAGGC...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTAAGACCACATGTCCTTaGGCAGAATCGTTGAGTGGG +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFKTTCP*AESLSG
Trigger: CCCACTCAACGATTCTGCTCAAGGACATGTGGTCTT...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTATGGTTGTGGAGCGCTaGTACACCTTATGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFMVVER*YTLWQV
Trigger: TACCTGCCATAAGGTGTATCAGCGCTCCACAACCAT...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCATCGAAAGTCAGCTTCTaGCTAAGGAGTCCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAASKVSF*LRSPAT
Trigger: AGTGGCAGGACTCCTTAGCCAGAAGCTGACTTTCGA...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCATTCCTGCTGAAATGCTaGTCATTGGGCTTCACCTGG +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAFLLKC*SLGFTW
Trigger: CCAGGTGAAGCCCAATGACCAGCATTTCAGCAGGAA...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAATTGCACCACAGATATTaGACACAAAAGTCTTTCCGA +
Preference number: 4 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHELHHRY*TQKSFR
Trigger: TCGGAAAGACTTTTGTGTTCAATATCTGTGGTGCAA...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTATACTCGTTCCCAGCTaGGTCAGTCACTTGACAATC +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFILVPS*VSHLTI
Trigger: GATTGTCAAGTGACTGACCCAGCTGGGAACGAGTAT...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAGTCTTTCTTGCAGGCTaGAGTAGTCCTCCATTCAAA +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAVFLAG*SSPPFK
Trigger: TTTGAATGGAGGACTACTGCAGCCTGCAAGAAAGAC...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR TCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAGAAGCGAATAATGGTTaGCCTTCTCCGAATTTTGTC +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAEANNG*PSPNFV
Trigger: GACAAAATTCGGAGAAGGTCAACCATTATTCGCTTC...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAAAATGTTACTGTCACTaGAGGGCTGTGACCATTACA +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAKCYCH*RAVTIT
Trigger: TGTAATGGTCACAGCCCTGCAGTGACAGTAACATTT...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCACTAAGCAATGAGTGCTaGTCTCAAAGTTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAALSNEC*SQSSGR
Trigger: TCTACCTGAACTTTGAGAGCAGCACTCATTGCTTAG...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR GCA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCACATAATTTGCAGTTTTaGTACACCACAGTTTCGCTC +
Preference number: 4 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAHNLQF*YTTVSL
Trigger: GAGCGAAACTGTGGTGTAGCAAAACTGCAAATTATG...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CCA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTTTTTCATATTTCATCTaGCAAGCAGATGCATATCGA +
Preference number: 4 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFFSYFI*QADAYR
Trigger: TCGATATGCATCTGCTTGCCAGATGAAATATGAAAA...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GGCCAACGTCAAATGCCTGGTTCCCCTTCAGCAGACAGGCAGCAGTaGCAGCAGGACAGACTCTCAGCTGTGTGCTGGGGTCCCGAAGGG +
Preference number: 5 (lower is better)
Translates to: GQRQMPGSPSADRQQ*QQDRLSAVCWGPEG
Trigger: CCCTTCGGGACCCCAGCACACAGCTGAGAGTCTGTCCTGCTGGCACTGCTGCCTGTCTGCTGAAGGGGAACCAGGCATTTGACGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACAAGAACGAGCCTGTCCTaGCTCAACAGCTTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: PQPVDWACPSILGHCPSTRTSLS*LNSFSP
Trigger: GGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGTTCT...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GGACTTGGTCCTTGTAGCTCAGCCTCTTGCTGGCCTTGCCCACACTaGTCCTCGTCTGTCCAAAGCAGGCCCCTACTCCGGGGCCACAGT +
Preference number: 5 (lower is better)
Translates to: GLGPCSSASCWPCPH*SSSVQSRPLLRGHS
Trigger: ACTGTGGCCCCGGAGTAGGGGCCTGCTTTGGACAGACGAGGATCAGTGTGGGCAAGGCCAGCAAGAGGCTGAGCTACAAGGACCAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCCTGACGATGGTGTCATaGAGGCCCAGGGGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFLTMVS*RPRGFR
Trigger: CCTGAAGCCCCTGGGCCTCAATGACACCATCGTCAG...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CCAGTCAGCGCCACCAGGAGAAGACTGAGGACTGCCCCAACAGCCTaGCTCCGCTCTGAGAGTCCTTTATACTCTGGCCCTGCGCTCTCA +
Preference number: 5 (lower is better)
Translates to: PVSATRRRLRTAPTA*LRSESPLYSGPALS
Trigger: TGAGAGCGCAGGGCCAGAGTATAAAGGACTCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTTCTCCTGGTGGCGCTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CCCGACGTCTGGGCACACTCGAACACGATCCTGGTGGAGAAGCGCTaGTCCCCACATCTGTCCCCATTCACGTACAGGATGCTGAGAGAC +
Preference number: 5 (lower is better)
Translates to: PDVWAHSNTILVEKR*SPHLSPFTYRMLRD
Trigger: GTCTCTCAGCATCCTGTACGTGAATGGGGACAGATGTGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTACACCAGCTGCAGGACTaGGTCCTTGTAGCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RIHSQWTGPALPSWDTALHQLQD*VLVAQP
Trigger: AGGCTGAGCTACAAGGACCAAGTCCTGCAGCTGGTG...TAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCTTCACCTGGCAGATGTaGGCACCAGCGCATGCAGGG +
Preference number: 5 (lower is better)
Translates to: EKNPQPVDWACPSILGHCFTWQM*APAHAG
Trigger: CCCTGCATGCGCTGGTGCCAACATCTGCCAGGTGAA...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCGTCCTTGCCTAGTCTaGGGGCTGGCACCTGGATCT +
Preference number: 5 (lower is better)
Translates to: EKNPQPVDWACPSILGHCRPCLV*GLAPGS
Trigger: AGATCCAGGTGCCAGCCCCAAGACTAGGCAAGGACG...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp TCCTCTTCCCGTATGCAGACGTGTCCACGGCAGTCCATGGCTTCCTaGCCATGCTCAGGGCGCTCAAGTCATACTCGTTCCCAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SSSRMQTCPRQSMAS*PCSGRSSHTRSQLG
Trigger: ACCCAGCTGGGAACGAGTATGACTTGAGCGCCCTGAGCATGGTCAGGAAGCCATGGACTGCCGTGGACACGTCTGCATACGGGAAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GCAGTAAGGCCAGCAAGCAGCCAGTCAGCGCCACCAGGAGAAGACTaGGGACTGCCCCAACAGCCTGACTCCGCTCTGAGAGTCCTTTAT +
Preference number: 5 (lower is better)
Translates to: AVRPASSQSAPPGED*GLPQQPDSALRVLY
Trigger: ATAAAGGACTCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTTCTCCTGGTGGCGCTGACTGGCTGCTTGCTGGCCTTACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp TCACAGGCCAGGGGTGTGTGCCAGGAGAAGAAGAGTGTGCACGTCTaGTTGTCCAAGGAGATGAGCATCGGCCTGTTGGTAGGTCCAGCC +
Preference number: 5 (lower is better)
Translates to: SQARGVCQEKKSVHV*LSKEMSIGLLVGPA
Trigger: GGCTGGACCTACCAACAGGCCGATGCTCATCTCCTTGGACAAGCAGACGTGCACACTCTTCTTCTCCTGGCACACACCCCTGGCCTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp TCTGCCAATATCTATAGGGGGCCCGTCCACAGGAACTTTGCATACTaGGGCACCTGCAGGGCAGGGCACTCCGTGCATGGGATTCAGTGG +
Preference number: 5 (lower is better)
Translates to: SANIYRGPVHRNFAY*GTCRAGHSVHGIQW
Trigger: CCACTGAATCCCATGCACGGAGTGCCCTGCCCTGCAGGTGCCTCAGTATGCAAAGTTCCTGTGGACGGGCCCCCTATAGATATTGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp TTTCTCAGGGGCTGTGAGCTTTCCACCTCCGCTCCTCGGCCTGAGTaGACTTTCACCTCTGGAACGGTCAGGACCTCATCCTCACTGTCC +
Preference number: 5 (lower is better)
Translates to: FLRGCELSTSAPRPE*TFTSGTVRTSSSLS
Trigger: GGACAGTGAGGATGAGGTCCTGACCGTTCCAGAGGTGAAAGTTCACTCAGGCCGAGGAGCGGAGGTGGAAAGCTCACAGCCCCTGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp AAGAAGCTCCTTTGTTCCCAGAGAGCAGACAGACACCGCCATCCTTaGAGCCTTCCTGGCCTAAGCCAGCTGCTGCTGTGCACACCCCTA +
Preference number: 5 (lower is better)
Translates to: KKLLCSQRADRHRHP*SLPGLSQLLLCTPL
Trigger: TAGGGGTGTGCACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTCTGGGAACAAAGGAGCTTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp TCTGGAACGGTCAGGACCTCATCCTCACTGTCCTGGTCGTCCCCATaGAGGGACGAGAGAGCTTCTGCTTTCACCGCCTTGGTGGTGATA +
Preference number: 5 (lower is better)
Translates to: SGTVRTSSSLSWSSP*RDERASAFTALVVI
Trigger: TATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTCGTCCCTGCATGGGGACGACCAGGACAGTGAGGATGAGGTCCTGACCGTTCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp AAGTCAGAACGAGCCTGTCCTTGCTCAACAGCTTCAGCCCCTCCTTaGGTCGGCCAACGTCAAATGCCTGGTTCCCCTTCAGCAGACAGG +
Preference number: 5 (lower is better)
Translates to: KSERACPCSTASAPP*VGQRQMPGSPSADR
Trigger: CCTGTCTGCTGAAGGGGAACCAGGCATTTGACGTTGGCCGACCCAAGGAGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGTTCTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp GCTGAAGTGTACCAGGAGAACAGGTACTGGCAGTCAGCGGTCTCGTaGCTGAACTCTGGGATCCCATCCTTCACCAGAGGGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: AEVYQENRYWQSAVS*LNSGIPSFTRGSQW
Trigger: CCACTGTGACCCTCTGGTGAAGGATGGGATCCCAGAGTTCAGCCACGAGACCGCTGACTGCCAGTACCTGTTCTCCTGGTACACTTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TTCGTCGCTGTCATCATGGAAGGACACCAGCTTGGCAGGGGCTGTTaGCTTGCGCTGTCCGGGTCTGAACTTCCCTTTTCTGGCCTTCTC +
Preference number: 5 (lower is better)
Translates to: FVAVIMEGHQLGRGC*LALSGSELPFSGLL
Trigger: GAGAAGGCCAGAAAAGGGAAGTTCAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCCATGATGACAGCGACGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCGGAGCAGCTCTCACTTaGCAGGTAATCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSGAALT*QVISVA
Trigger: TGCCACAGAGATTACCTGCAAAGTGAGAGCTGCTCC...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CGCCTGGGTGAGCTGCTGGGAGTCACCAGCTGGCAAGAGCAACACCCAGAGGGACAGCAGCTGGTCAGCTaGTTTATCACAGTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: RLGELLGVTSWQEQHPEGQQLVS*FITVSL
Trigger: AAGGGAAACTGTGATAAACAAGCTGACCAGCTGCTG...TCCCTCTGGGTGTTGCTCTTGCCAGCTGGTGACTCCCAGCAGCTCACCCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GTTCACCATGGTCACCTCCTGAGGCCTCACCGCGCAGGCAGCCCGTaGGTACCAGTAAAAGTAGTAGGTGCAGCTGACACTGTCAAACCT +
Preference number: 5 (lower is better)
Translates to: VHHGHLLRPHRAGSP*VPVKVVGAADTVKP
Trigger: AGGTTTGACAGTGTCAGCTGCACCTACTACTTTTACTGGTACTCACGGGCTGCCTGCGCGGTGAGGCCTCAGGAGGTGACCATGGTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CACCAGGAGAAGACTGAGGACTGCCCCAACAGCCTGACTCCGCTCTaGGAGTCCTTTATACTCTGGCCCTGCGCTCTCATCCTCAAAGTC +
Preference number: 5 (lower is better)
Translates to: HQEKTEDCPNSLTPL*ESFILWPCALILKV
Trigger: GACTTTGAGGATGAGAGCGCAGGGCCAGAGTATAAAGGACTCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTTCTCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp TATAAACTGCATTGTTTTTGGAGTCAACAGCTTCCCATGTGTAACTaGACAGGGCGTCCAAGTCGACGGCCTGGGCCTGCGCGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: YKLHCFWSQQLPMCN*TGRPSRRPGPARSP
Trigger: CGGGCTCCGCGCAGGCCCAGGCCGTCGACTTGGACGCCCTGTGCAGTTACACATGGGAAGCTGTTGACTCCAAAAACAATGCAGTTTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp ATCCTCACTGTCCTGGTCGTCCCCATGCAGGGACGAGAGAGCTTCTaGTTTCACCGCCTTGGTGGTGATATGGCCATTTTCTTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: ILTVLVVPMQGRESF*FHRLGGDMAIFLPV
Trigger: GACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTCGTCCCTGCATGGGGACGACCAGGACAGTGAGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TACTCACAGTTGTTCACGAACTGGAACATAGGTGAGCCCGACGTCTaGGCACACTCGAACACGATCCTGGTGGAGAAGCGCTGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: YSQLFTNWNIGEPDV*AHSNTILVEKRWSP
Trigger: TGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAACTGTGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp AGGGGCTTCAGGTCATACAAATTGCCATGCCTGGGGTCCTTCACCTaGCAGTTGTCTCCTTCCTCTCTGATCACAGGGCAGGCCTCCACT +
Preference number: 5 (lower is better)
Translates to: RGFRSYKLPCLGSFT*QLSPSSLITGQAST
Trigger: AGTGGAGGCCTGCCCTGTGATCAGAGAGGAAGGAGACAACTGCCAGGTGAAGGACCCCAGGCATGGCAATTTGTATGACCTGAAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TTGTTCCCAGAGAGCAGACAGACACCGCCATCCTTGCAGCCTTCCTaGCCTAAGCCAGCTGCTGCTGTGCACACCCCTATACTGTATGTG +
Preference number: 5 (lower is better)
Translates to: LFPESRQTPPSLQPS*PKPAAAVHTPILYV
Trigger: CACATACAGTATAGGGGTGTGCACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTCTGGGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp ACACCCAGAGGACACACAGCTGAAGTGTACCAGGAGAACAGGTACTaGCAGTCAGCGGTCTCGTGGCTGAACTCTGGGATCCCATCCTTC +
Preference number: 5 (lower is better)
Translates to: TPRGHTAEVYQENRY*QSAVSWLNSGIPSF
Trigger: GAAGGATGGGATCCCAGAGTTCAGCCACGAGACCGCTGACTGCCAGTACCTGTTCTCCTGGTACACTTCAGCTGTGTGTCCTCTGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCTTCAGGTCATACAAATaGCCATGCCTGGGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSFRSYK*PCLGSF
Trigger: GAAGGACCCCAGGCATGGCAATTTGTATGACCTGAA...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GGCACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTGAGGACTTGGGGCAAAGCCTCTTGCTGGCCTaGCCCACACTGATCCTCGTC +
Preference number: 5 (lower is better)
Translates to: GTCWKHTAAMIVSEDLGQSLLLA*PTLILV
Trigger: GACGAGGATCAGTGTGGGCAAGGCCAGCAAGAGGCT...TTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCCCAGTGGCACTCTTCTaGCAAATGCTGGCTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFPVALF*QMLALS
Trigger: TGAAAGAGCCAGCATTTGCAAGAAGAGTGCCACTGG...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGCTGAAATGCTGGTCATaGGGCTTCACCTGGCAGATG +
Preference number: 5 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLLKCWS*GFTWQM
Trigger: CATCTGCCAGGTGAAGCCCAATGACCAGCATTTCAG...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCCCTAGCACAGTGGAAGAAACAGACTaGGTCTTATCTTTCCCACAC +
Preference number: 5 (lower is better)
Translates to: PQPVDWACPSILGHCPSTVEETD*VLSFPH
Trigger: GTGTGGGAAAGATAAGACCAAGTCTGTTTCTTCCAC...TGTGCTAGGGCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp AAGTCACCATCCACATACTGCAGGACAGTCACACCGTCTGTCCACTaGGGGCCATCCCTCACCTTGCCAAGGTTCACAGGCTTAGAGCCA +
Preference number: 5 (lower is better)
Translates to: KSPSTYCRTVTPSVH*GPSLTLPRFTGLEP
Trigger: TGGCTCTAAGCCTGTGAACCTTGGCAAGGTGAGGGATGGCCCTCAGTGGACAGACGGTGTGACTGTCCTGCAGTATGTGGATGGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GACTGGAGAGGTCATACTGTTCCATCATGGAGGGGTCTGTCACCATaGACTCCAGGGGTTCTTCTGGGCAGGCATAACTGGTGTACCACC +
Preference number: 5 (lower is better)
Translates to: DWRGHTVPSWRGLSP*TPGVLLGRHNWCTT
Trigger: GGTGGTACACCAGTTATGCCTGCCCAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCTCCATGATGGAACAGTATGACCTCTCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp CACTGGTGGTGCAAGCAGAGCCGTTCACATACTCTAAGAGGAGGCTaGCACTCTCCTCCACCACAGGGCCTATCTTTGCAACTCCCAAGT +
Preference number: 5 (lower is better)
Translates to: HWWCKQSRSHTLRGG*HSPPPQGLSLQLPS
Trigger: ACTTGGGAGTTGCAAAGATAGGCCCTGTGGTGGAGGAGAGTGGCAGCCTCCTCTTAGAGTATGTGAACGGCTCTGCTTGCACCACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp AGAGCTTCTGCTTTCACCGCCTTGGTGGTGATATGGCCATTTTCTTaGCCGTCCTTGCCTAGTCTTGGGGCTGGCACCTGGATCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RASAFTALVVIWPFS*PSLPSLGAGTWISS
Trigger: GGAAGAGATCCAGGTGCCAGCCCCAAGACTAGGCAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATCAGTCATCATGTGTGTaGCTCTTCACAGGACAGGCA +
Preference number: 5 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYQSSCV*LFTGQA
Trigger: TGCCTGTCCTGTGAAGAGCAACACACATGATGACTG...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAATGACTGCTTCATCTaGGTGCCTGTAATCCAGCTG +
Preference number: 5 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFNDCFI*VPVIQL
Trigger: CAGCTGGATTACAGGCACCAAGATGAAGCAGTCATT...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CAGGGCAGGGCACTCCGTGCATGGGATTCAGTGGCTGGCAGATGTTaGTATAGAAGTCAGGGGTGGTGTCAGAGGTGTCATCCTCACTTT +
Preference number: 5 (lower is better)
Translates to: QGRALRAWDSVAGRC*YRSQGWCQRCHPHF
Trigger: AAAGTGAGGATGACACCTCTGACACCACCCCTGACTTCTATATCAACATCTGCCAGCCACTGAATCCCATGCACGGAGTGCCCTGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CCTGGCAGATGTTGGCACCAGCGCATGCAGGGTAAGAAGAGCTGGTaGTGGAGGAGAGCTGGATTTCATACAGGTAGTTGTCCCCATTGG +
Preference number: 5 (lower is better)
Translates to: PGRCWHQRMQGKKSW*WRRAGFHTGSCPHW
Trigger: CCAATGGGGACAACTACCTGTATGAAATCCAGCTCTCCTCCATCACCAGCTCTTCTTACCCTGCATGCGCTGGTGCCAACATCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GGAGTGACAAATCAAAGGAAAACCCTGCCTGGGCATCAAGGACCGTaGAGTTCTCTCCTTCTGTCTTCGACAGTACACAGGCAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GVTNQRKTLPGHQGP*SSLLLSSTVHRQQP
Trigger: CGGCTGCTGCCTGTGTACTGTCGAAGACAGAAGGAGAGAACTGCACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GAAGTCAGGGGTGGTGTCAGAGGTGTCATCCTCACTTTCATCGTATaGTTCGTAGCCACCAGTGCGGTGGATGAGAGGGGACAGGTCAAT +
Preference number: 5 (lower is better)
Translates to: EVRGGVRGVILTFIV*FVATSAVDERGQVN
Trigger: ATTGACCTGTCCCCTCTCATCCACCGCACTGGTGGCTACGAAGCATACGATGAAAGTGAGGATGACACCTCTGACACCACCCCTGACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CACCTTCAGACTTCACTAGACTGGAGAGGTCATACTGTTCCATCATaGAGGGGTCTGTCACCATGCACTCCAGGGGTTCTTCTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HLQTSLDWRGHTVPS*RGLSPCTPGVLLGR
Trigger: CCTGCCCAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCTCCATGATGGAACAGTATGACCTCTCCAGTCTAGTGAAGTCTGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCCAAACAGCAGCCTCTTaGTTATTACAGAGTGAGACC +
Preference number: 5 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSQTAAS*LLQSET
Trigger: GGTCTCACTCTGTAATAACAAAGAGGCTGCTGTTTG...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCATCCGCCTTTTTCTCTaGACAAACAGCAGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSIRLFL*TNSSLF
Trigger: AAAGAGGCTGCTGTTTGTCAAGAGAAAAAGGCGGAT...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCGGGCCATCCCTCACCTaGCCAAGGTTCACAGGCTTA +
Preference number: 5 (lower is better)
Translates to: KSLNTSRKESTASGLGLPGPSLT*PRFTGL
Trigger: TAAGCCTGTGAACCTTGGCAAGGTGAGGGATGGCCC...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGTGAGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCACAAAGTCGCAGTCATaGGTCCTTATCAGCTTAGGA +
Preference number: 5 (lower is better)
Translates to: SEDLGQTPGHEVPPFGRFTKSQS*VLISLG
Trigger: TCCTAAGCTGATAAGGACCAATGACTGCGACTTTGT...GAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp TACACCAACACTGGCCCTACACCAACACTGGCCCACCGCGTTTCACGGTGTCTGTGCACTCCATCTTCTTaGGAGGGCAGACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: YTNTGPTPTLAHRVSRCLCTPSS*EGRQLL
Trigger: CAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCA...CAGACACCGTGAAACGCGGTGGGCCAGTGTTGGTGTAGGGCCAGTGTTGGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAACACTGTCAAACCTCTaGAATGCAGGCCTGCCCACA +
Preference number: 5 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRTLSNL*NAGLPT
Trigger: TGTGGGCAGGCCTGCATTCAAGAGGTTTGACAGTGT...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AGGACTTGGGGCAAACCCCTGGGCACGAAGTACCGCCCTTTGGCCGATTCAAGCTTATCTTTCCCACACTaGGAGGAAGAGGTAAACACC +
Preference number: 5 (lower is better)
Translates to: RTWGKPLGTKYRPLADSSLSFPH*EEEVNT
Trigger: GGTGTTTACCTCTTCCTCCAAGTGTGGGAAAGATAA...GCTTGAATCGGCCAAAGGGCGGTACTTCGTGCCCAGGGGTTTGCCCCAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GCATCTTCAGGACAGTTCCTGGCCTTCCCCTCCTGCAGCACCCGGTaGCAGACGTTGATGAAGAAATACTTTTCTGATTCTGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: ASSGQFLAFPSCSTR*QTLMKKYFSDSAWL
Trigger: CAGCCAGGCAGAATCAGAAAAGTATTTCTTCATCAACGTCTGTCACCGGGTGCTGCAGGAGGGGAAGGCCAGGAACTGTCCTGAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GCTTTTCTCCCTCTTCCTTCACATAAGTCAGAACGAGCCTGTCCTTaGTCAACAGCTTCAGCCCCTCCTTGGGTCGGCCAACGTCAAATG +
Preference number: 5 (lower is better)
Translates to: AFLPLPSHKSERACP*STASAPPWVGQRQM
Trigger: CATTTGACGTTGGCCGACCCAAGGAGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGTTCTGACTTATGTGAAGGAAGAGGGAGAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp ATGCTGGTCATTGGGCTTCACCTGGCAGATGTTGGCACCAGCGCATaGAGGGTAAGAAGAGCTGGTGATGGAGGAGAGCTGGATTTCATA +
Preference number: 5 (lower is better)
Translates to: MLVIGLHLADVGTSA*RVRRAGDGGELDFI
Trigger: TATGAAATCCAGCTCTCCTCCATCACCAGCTCTTCTTACCCTGCATGCGCTGGTGCCAACATCTGCCAGGTGAAGCCCAATGACCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp CAGCTGGTCAGCTTGTTTATCACAGTTTCCCTTCTCTCCTTCTTATaGAGCAGTAAGGCCAGCAAGCAGCCAGTCAGCGCCACCAGGAGA +
Preference number: 5 (lower is better)
Translates to: QLVSLFITVSLLSFL*SSKASKQPVSATRR
Trigger: TCTCCTGGTGGCGCTGACTGGCTGCTTGCTGGCCTTACTGCTGCATAAGAAGGAGAGAAGGGAAACTGTGATAAACAAGCTGACCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TTCCATCATGGAGGGGTCTGTCACCATGCACTCCAGGGGTTCTTCTaGGCAGGCATAACTGGTGTACCACCGGAAGTTGTAGGTAGAGTT +
Preference number: 5 (lower is better)
Translates to: FHHGGVCHHALQGFF*AGITGVPPEVVGRV
Trigger: AACTCTACCTACAACTTCCGGTGGTACACCAGTTATGCCTGCCCAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCTCCATGATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CTGGGGTCCCTTATTGAGCAAGCCTGGTCTGTTTCTGTGATTGTCTaGATAGGGCAGGCAGCCTCCGTGTTCCACAAGAAACTGACCACA +
Preference number: 5 (lower is better)
Translates to: LGSLIEQAWSVSVIV*IGQAASVFHKKLTT
Trigger: TGTGGTCAGTTTCTTGTGGAACACGGAGGCTGCCTGCCCTATCCAGACAATCACAGAAACAGACCAGGCTTGCTCAATAAGGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp AGGAGTCCTGCCACTTTCTGGAATCCCTGTGGTCCTTTCTTTTCCTaGCATGATGAGACTGCCTTGGATCCGTCATGGGCAGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: RSPATFWNPCGPFFS*HDETALDPSWAEQT
Trigger: TGTCTGCTCTGCCCATGACGGATCCAAGGCAGTCTCATCATGCCAGGAAAAGAAAGGACCACAGGGATTCCAGAAAGTGGCAGGACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GGCACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTGAGGACTTGGGGCAAAGTGTGCACGTCTGCTaGTCCAAGGAGATGAGCATC +
Preference number: 5 (lower is better)
Translates to: GTCWKHTAAMIVSEDLGQSVHVC*SKEMSI
Trigger: GATGCTCATCTCCTTGGACAAGCAGACGTGCACACT...TTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GGCACCTGTTGGAAGCACACAGCAGCTATGATCGTAAGTGAGGACTTGGGGCAACCCCAAAACCTGGACTaGACCAGTGGCACTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GTCWKHTAAMIVSEDLGQPQNLD*TSGTLL
Trigger: AAGAAGAGTGCCACTGGTCAAGTCCAGGTTTTGGGG...TTGCCCCAAGTCCTCACTTACGATCATAGCTGCTGTGTGCTTCCAACAGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCCCGAGGCTGAAGCTCTaGCCGGTCACAGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: ACVCALTKCKAKNRILQLPRLKL*PVTGLV
Trigger: CACCAACCCTGTGACCGGCAAGAGCTTCAGCCTCGG...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp TTGAGGACTGATCTGCACCACACCCAAGTTAAAACTGTTGTCTTCTaGCACCATGCAGGACCCCAATGCAATGCCGTGGCAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: LRTDLHHTQVKTVVF*HHAGPQCNAVAARD
Trigger: ATCCCTGGCTGCCACGGCATTGCATTGGGGTCCTGCATGGTGTCAGAAGACAACAGTTTTAACTTGGGTGTGGTGCAGATCAGTCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CCACACAAACACATACTCACAGTTGTTCACGAACTGGAACATAGGTaGGCCCGACGTCTGGGCACACTCGAACACGATCCTGGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: PHKHILTVVHELEHR*ARRLGTLEHDPGGE
Trigger: TTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAACTGTGAGTATGTGTTTGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CTTGGACGTAGTACTTGGTCATGTCAGAGGTGCCTACTTTCCTGCTaGAATGCTGGTCATTGGGCTTCACCTGGCAGATGTTGGCACCAG +
Preference number: 5 (lower is better)
Translates to: LGRSTWSCQRCLLSC*NAGHWASPGRCWHQ
Trigger: CTGGTGCCAACATCTGCCAGGTGAAGCCCAATGACCAGCATTTCAGCAGGAAAGTAGGCACCTCTGACATGACCAAGTACTACGTCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GGTACCCTCTCTCCGCTCAGATGGGCACACAAATGTTACTGTCACTaGAGGGCTGTGACCATTACAGAAGTCTGGCTTTTCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: GTLSPLRWAHKCYCH*RAVTITEVWLFSLF
Trigger: GAAGAGGGAGAAAAGCCAGACTTCTGTAATGGTCACAGCCCTGCAGTGACAGTAACATTTGTGTGCCCATCTGAGCGGAGAGAGGGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TCCACTGTTCGCCACACAAACACATACTCACAGTTGTTCACGAACTaGAACATAGGTGAGCCCGACGTCTGGGCACACTCGAACACGATC +
Preference number: 5 (lower is better)
Translates to: STVRHTNTYSQLFTN*NIGEPDVWAHSNTI
Trigger: GATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAACTGTGAGTATGTGTTTGTGTGGCGAACAGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp GTTGCCAGCCGCATCCTGGACAGAACACTCTGTCACATTGAAAGGTaGGCAGGCATACTGTGTTCGCCACTCAAACATATAGGAGCAGTC +
Preference number: 5 (lower is better)
Translates to: VASRILDRTLCHIER*AGILCSPLKHIGAV
Trigger: GACTGCTCCTATATGTTTGAGTGGCGAACACAGTATGCCTGCCCACCTTTCAATGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAGCATCCCGAGTAACCTaGAAAGTGCTTGTGGAAAGG +
Preference number: 5 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTASRVT*KVLVER
Trigger: CCTTTCCACAAGCACTTTCAAGGTTACTCGGGATGC...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACATCTGTCTCCTCCTCCTaGCTGACCTTTGAGTACTTG +
Preference number: 5 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTSVSSS*LTFEYL
Trigger: CAAGTACTCAAAGGTCAGCAAGGAGGAGGAGACAGA...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GAGTGGGCTAAGATTAAACACAAACCCACTGCTGGGGTCCCTTATTaGGCAAGCCTGGTCTGTTTCTGTGATTGTCTGGATAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: EWAKIKHKPTAGVPY*ASLVCFCDCLDRAG
Trigger: GCCTGCCCTATCCAGACAATCACAGAAACAGACCAGGCTTGCTCAATAAGGGACCCCAGCAGTGGGTTTGTGTTTAATCTTAGCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GCTTCCCCGCAACCGTTCCACAGGCAGGCATTGCACCACAGATATTaGACACAAAAGTCTTTCCGATGCCTAAGACCACATGTCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ASPQPFHRQALHHRY*TQKSFRCLRPHVLE
Trigger: CTCAAGGACATGTGGTCTTAGGCATCGGAAAGACTTTTGTGTTCAATATCTGTGGTGCAATGCCTGCCTGTGGAACGGTTGCGGGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CAATGGAGTTGCCAGCCGCATCCTGGACAGAACACTCTGTCACATTaGAAGGTGGGCAGGCATACTGTGTTCGCCACTCAAACATATAGG +
Preference number: 5 (lower is better)
Translates to: QWSCQPHPGQNTLSH*KVGRHTVFATQTYR
Trigger: CCTATATGTTTGAGTGGCGAACACAGTATGCCTGCCCACCTTTCAATGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCAACTCCATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp TGCCAAGGAGCCCTCATGATTTTCATATTTCATCTGGCAAGCAGATaGATATCGATCGCAGCCTGGCACAGGATTCAGAGGCCGACACAC +
Preference number: 5 (lower is better)
Translates to: CQGALMIFIFHLASR*ISIAAWHRIQRPTH
Trigger: GTGTGTCGGCCTCTGAATCCTGTGCCAGGCTGCGATCGATATGCATCTGCTTGCCAGATGAAATATGAAAATCATGAGGGCTCCTTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp CAGAATGACTGCTTCATCTTGGTGCCTGTAATCCAGCTGCATCGATaGAAGGCGCCCAAAAGAAGCTCCTTTGTTCCCAGAGAGCAGACA +
Preference number: 5 (lower is better)
Translates to: QNDCFILVPVIQLHR*KAPKRSSFVPREQT
Trigger: TGTCTGCTCTCTGGGAACAAAGGAGCTTCTTTTGGGCGCCTTGCATCGATGCAGCTGGATTACAGGCACCAAGATGAAGCAGTCATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp GGACTTGGCAGTGAGTTTAGGAATGGTACCCTCTCTCCGCTCAGATaGGCACACAAATGTTACTGTCACTGCAGGGCTGTGACCATTACA +
Preference number: 5 (lower is better)
Translates to: GLGSEFRNGTLSPLR*AHKCYCHCRAVTIT
Trigger: TGTAATGGTCACAGCCCTGCAGTGACAGTAACATTTGTGTGCCCATCTGAGCGGAGAGAGGGTACCATTCCTAAACTCACTGCCAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCCAGCCCATAGTGGTGTaGAATTCCAGGAGTGATCTG +
Preference number: 5 (lower is better)
Translates to: KSLNTSRKESTASGLGLPQPIVV*NSRSDL
Trigger: CAGATCACTCCTGGAATTCAACACCACTATGGGCTG...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAAGGTCTTCCTTCTCTTaGATGCAGGCGTATTTAGTG +
Preference number: 5 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRRSSFS*MQAYLV
Trigger: CACTAAATACGCCTGCATCAAAGAGAAGGAAGACCT...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ACTAAGTGTGCATCAAGGACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGAACCACACATTCCCAGTaGAAAGTGAATATGGGATGG +
Preference number: 5 (lower is better)
Translates to: TKCASRTSSGAMDNGSGRTTHSQ*KVNMGW
Trigger: CCATCCCATATTCACTTTCAACTGGGAATGTGTGGT...TCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGTCCTTGATGCACACTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTTCCATCCTGGGACACTGCAACACATACTCACAGTaGTTCACGAACTGGAACATA +
Preference number: 5 (lower is better)
Translates to: EKNPQPVDWACPSILGHCNTYSQ*FTNWNI
Trigger: TATGTTCCAGTTCGTGAACAACTGTGAGTATGTGTT...GCAGTGTCCCAGGATGGAAGGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCTGGCCTGTGCTGGGGTaGGTGACTTGGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: ACVCALTKCKAKNRILQLWPVLG*VTWQSS
Trigger: TGATGACTGCCAAGTCACCAACCCCAGCACAGGCCA...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp CGTTTCTGGAGGGCAAGGATCACCATTCACATAACTCAGAATGACTaGTTCATCTTGGTGCCTGTAATCCAGCTGCATCGATGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: RFWRARITIHITQND*FILVPVIQLHRCKA
Trigger: CGCCTTGCATCGATGCAGCTGGATTACAGGCACCAAGATGAAGCAGTCATTCTGAGTTATGTGAATGGTGATCCTTGCCCTCCAGAAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CCATTCTTCTTCGTGAGGAGTGACAAATCAAAGGAAAACCCTGCCTaGGCATCAAGGACCGTGCAGTTCTCTCCTTCTGTCTTCGACAGT +
Preference number: 5 (lower is better)
Translates to: PFFFVRSDKSKENPA*ASRTVQFSPSVFDS
Trigger: ACTGTCGAAGACAGAAGGAGAGAACTGCACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp ACTCTGGGATCCCATCCTTCACCAGAGGGTCACAGTGGAAGAAGATaGTGGAAGAAACAGACTTGGTCTTATCTTTCCCACACTTGGAGG +
Preference number: 5 (lower is better)
Translates to: TLGSHPSPEGHSGRR*WKKQTWSYLSHTWR
Trigger: CCTCCAAGTGTGGGAAAGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACTGTGACCCTCTGGTGAAGGATGGGATCCCAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp TCGTGGCTGAACTCTGGGATCCCATCCTTCACCAGAGGGTCACAGTaGAAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SWLNSGIPSFTRGSQ*KKMVEETDLVLSFP
Trigger: TGGGAAAGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTTCCACTGTGACCCTCTGGTGAAGGATGGGATCCCAGAGTTCAGCCACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ACCAGTTCAGGAGCCATGGACAACGGCTCCGGCAGACGGCCAGCTTCACCTTATTTACCTGCAGTTTTGTaGCACTCAAAGTTTATGACA +
Preference number: 5 (lower is better)
Translates to: TSSGAMDNGSGRRPASPYLPAVL*HSKFMT
Trigger: TGTCATAAACTTTGAGTGCAACAAAACTGCAGGTAA...ATAAGGTGAAGCTGGCCGTCTGCCGGAGCCGTTGTCCATGGCTCCTGAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AACACAGCCCTCTGTTGTGAGATGCATGTGGCTTGGGCACCTGTTGGAAGCACAGAGGGCAGACAACTTTaGTCTTCCACTCAAATGTCA +
Preference number: 5 (lower is better)
Translates to: NTALCCEMHVAWAPVGSTEGRQL*SSTQMS
Trigger: TGACATTTGAGTGGAAGACAAAAGTTGTCTGCCCTC...TGTGCTTCCAACAGGTGCCCAAGCCACATGCATCTCACAACAGAGGGCTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CTCCTCTCCCATCCTTACCTGCAGTTTTGTTGCACTCAAAGTTTATaGCACTCATCCTCTGGAAGCCAGAGCTACACTCATCACCTCCAG +
Preference number: 5 (lower is better)
Translates to: LLSHPYLQFCCTQSL*HSSSGSQSYTHHLQ
Trigger: CTGGAGGTGATGAGTGTAGCTCTGGCTTCCAGAGGATGAGTGTCATAAACTTTGAGTGCAACAAAACTGCAGGTAAGGATGGGAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp GTTCCAAGACTTACCACTTTTCGCTACCTGGCAGGCCCCCGAGTTTaGCTGACAAGGATCCATGGATACAGGGCCACAAACATTTATGTA +
Preference number: 5 (lower is better)
Translates to: VPRLTTFRYLAGPRV*LTRIHGYRATNIYV
Trigger: TACATAAATGTTTGTGGCCCTGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGCCAGGTAGCGAAAAGTGGTAAGTCTTGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp GTCCACCTCACCTGTGAACACAGGCTCTCCTCTCCCATCCTTACCTaGAGTTTTGTTGCACTCAAAGTTTATGACACTCATCCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: VHLTCEHRLSSPILT*SFVALKVYDTHPLE
Trigger: TTCCAGAGGATGAGTGTCATAAACTTTGAGTGCAACAAAACTGCAGGTAAGGATGGGAGAGGAGAGCCTGTGTTCACAGGTGAGGTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp AGGCCTGCCCACAGTCTTCGCACAGGTCAATTCGATTACAGACGATaGAGTCTTATTCCCACCACAAGGATAGCCTTTCGAGTAAGTAAC +
Preference number: 5 (lower is better)
Translates to: RPAHSLRTGQFDYRR*SLIPTTRIAFRVSN
Trigger: GTTACTTACTCGAAAGGCTATCCTTGTGGTGGGAATAAGACTGCATCGTCTGTAATCGAATTGACCTGTGCGAAGACTGTGGGCAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp CCAGTAAAAGTAGTAGGTGCAGCTGACACTGTCAAACCTCTTGAATaGAGGCCTGCCCACAGTCTTCGCACAGGTCAATTCGATTACAGA +
Preference number: 5 (lower is better)
Translates to: PVKVVGAADTVKPLE*RPAHSLRTGQFDYR
Trigger: TCTGTAATCGAATTGACCTGTGCGAAGACTGTGGGCAGGCCTGCATTCAAGAGGTTTGACAGTGTCAGCTGCACCTACTACTTTTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CCAATGCAGTTTCAAACTCAAAGTAAGTGTTCCGGATCCCTCGTGTaGAGTCAATGTCCTGATGCAGGAATTTGGGGGCTCCTGGGTAAA +
Preference number: 5 (lower is better)
Translates to: PMQFQTQSKCSGSLV*SQCPDAGIWGLLGK
Trigger: TTTACCCAGGAGCCCCCAAATTCCTGCATCAGGACATTGACTCCACACGAGGGATCCGGAACACTTACTTTGAGTTTGAAACTGCATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CCTTTGAGTACTTGTAGGACACGCCCGAGCTTCTTCTGCAGCAGCTaGTCAGCTTGTTTATCACAGTTTCCCTTCTCTCCTTCTTATGCA +
Preference number: 5 (lower is better)
Translates to: PLSTCRTRPSFFCSS*SACLSQFPFSPSYA
Trigger: TGCATAAGAAGGAGAGAAGGGAAACTGTGATAAACAAGCTGACCAGCTGCTGCAGAAGAAGCTCGGGCGTGTCCTACAAGTACTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTATGTCTCTACACACGTaGATGAACAGAGACGTGTCA +
Preference number: 5 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPMSLHT*MNRDVS
Trigger: TGACACGTCTCTGTTCATCAACGTGTGTAGAGACAT...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CACTCTCCTCCACCACAGGGCCTATCTTTGCAACTCCCAAGTTACTaGTGGATACAGTCTCTGCCAAGGAGCCCTCATGATTTTCATATT +
Preference number: 5 (lower is better)
Translates to: HSPPPQGLSLQLPSY*WIQSLPRSPHDFHI
Trigger: AATATGAAAATCATGAGGGCTCCTTGGCAGAGACTGTATCCATCAGTAACTTGGGAGTTGCAAAGATAGGCCCTGTGGTGGAGGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp TCCCCATTCACGTACAGGATGCTGAGAGACCCATTTCCAGTAGCTTaGGGACTGATCTGCACCACACCCAAGTTAAAACTGTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: SPFTYRMLRDPFPVA*GLICTTPKLKLLSS
Trigger: AGAAGACAACAGTTTTAACTTGGGTGTGGTGCAGATCAGTCCTCAAGCTACTGGAAATGGGTCTCTCAGCATCCTGTACGTGAATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CCTGGAGTTCACTTGGTTGTCACTGCAGGTGAAGCGAATAATGGTTaGCCTTCTCCGAATTTTGTCTGGGCACAAGTCACCATCCACATA +
Preference number: 5 (lower is better)
Translates to: PGVHLVVTAGEANNG*PSPNFVWAQVTIHI
Trigger: TATGTGGATGGTGACTTGTGCCCAGACAAAATTCGGAGAAGGTCAACCATTATTCGCTTCACCTGCAGTGACAACCAAGTGAACTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CCCTCGTGTGGAGTCAATGTCCTGATGCAGGAATTTGGGGGCTCCTaGGTAAATGTCATCGTTGCAAATAAAACGGATGATGAATGCTGT +
Preference number: 5 (lower is better)
Translates to: PSCGVNVLMQEFGGS*VNVIVANKTDDECC
Trigger: ACAGCATTCATCATCCGTTTTATTTGCAACGATGACATTTACCCAGGAGCCCCCAAATTCCTGCATCAGGACATTGACTCCACACGAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAATGCTGGGGTCCCTTATaGAGCAAGCCTGGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHECWGPL*SKPGLF
Trigger: AAACAGACCAGGCTTGCTCAATAAGGGACCCCAGCA...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAAGTCACAGCCTCCCAGTaGTCACTGTACCTTGACAGT +
Preference number: 5 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHEVTASQ*SLYLDS
Trigger: ACTGTCAAGGTACAGTGACAACTGGGAGGCTGTGAC...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAAGCTGGGGTTGGTGACTaGGCAGTCATCATGTGTGTT +
Preference number: 5 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHEAGVGD*AVIMCV
Trigger: AACACACATGATGACTGCCAAGTCACCAACCCCAGC...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp CTTCTCTGTCTCAACTTTATATGCACCATTCTTCTTCGTGAGGAGTaGCAAATCAAAGGAAAACCCTGCCTGGGCATCAAGGACCGTGCA +
Preference number: 5 (lower is better)
Translates to: LLCLNFICTILLREE*QIKGKPCLGIKDRA
Trigger: TGCACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAGAATGGTGCATATAAAGTTGAGACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp AAGTCACTGAACACATCAAGAAAAGAATCCACAGCCAGTGGACTGGGCCTGCCCTCCTTACCTGCAGTTTaGTTGCACTCAAAGTTTATG +
Preference number: 5 (lower is better)
Translates to: KSLNTSRKESTASGLGLPSLPAV*LHSKFM
Trigger: CATAAACTTTGAGTGCAACAAAACTGCAGGTAAGGA...GGGCAGGCCCAGTCCACTGGCTGTGGATTCTTTTCTTGATGTGTTCAGTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAACCAAAAGAAGCTCCTTaGTTCCCAGAGAGCAGACAG +
Preference number: 5 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHEPKEAP*FPESRQ
Trigger: CTGTCTGCTCTCTGGGAACAAAGGAGCTTCTTTTGG...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp ATTTTCATATTTCATCTGGCAAGCAGATGCATATCGATCGCAGCCTaGCACAGGATTCAGAGGCCGACACACATTGAGGTAGTATTTCCT +
Preference number: 5 (lower is better)
Translates to: IFIFHLASRCISIAA*HRIQRPTHIEVVFP
Trigger: AGGAAATACTACCTCAATGTGTGTCGGCCTCTGAATCCTGTGCCAGGCTGCGATCGATATGCATCTGCTTGCCAGATGAAATATGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp CACAAGAAACTGACCACACATTCCCAGTTGAAAGTGAATATGGGATaGGAGTTCATAAATCCTCGACCACAGACAAGATGGATCCTGGTG +
Preference number: 5 (lower is better)
Translates to: HKKLTTHSQLKVNMG*EFINPRPQTRWILV
Trigger: CACCAGGATCCATCTTGTCTGTGGTCGAGGATTTATGAACTCCCATCCCATATTCACTTTCAACTGGGAATGTGTGGTCAGTTTCTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp ATCGAGCTGAAGTCTTATTTGGTTGGAGGTGCTTGGCTGTCCATGGCTCCACCTTATGACTTCCAATTTTaGTGTATGAACAAGCCCCAA +
Preference number: 5 (lower is better)
Translates to: IELKSYLVGGAWLSMAPPYDFQF*CMNKPQ
Trigger: TTGGGGCTTGTTCATACACAAAAATTGGAAGTCATA...AGGTGGAGCCATGGACAGCCAAGCACCTCCAACCAAATAAGACTTCAGCTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp ATGAGAGCAGTCGCAAGTCATAGGTCTTATGCTTCTGAACAAACTTaGACTCCATCTTCTTTGGAGGGCAGACAACTTTTGTCTTCCACT +
Preference number: 5 (lower is better)
Translates to: MRAVASHRSYASEQT*TPSSLEGRQLLSST
Trigger: AGTGGAAGACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCAAGTTTGTTCAGAAGCATAAGACCTATGACTTGCGACTGCTCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GCATGTGTGTGTGCCCTCACAAAATGCAAAGCGAAGAATAGAATACTGCAGCTCTTAAATATGTCTTTCTaGCAGGCTGCAGTAGTCCTC +
Preference number: 5 (lower is better)
Translates to: ACVCALTKCKAKNRILQLLNMSF*QAAVVL
Trigger: GAGGACTACTGCAGCCTGCAAGAAAGACATATTTAA...GAGCTGCAGTATTCTATTCTTCGCTTTGCATTTTGTGAGGGCACACACACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp CCCTTTGGCCGATTCAAGCAACACCTTGTTCCATTGACTGTAAACGATCATGAAAGTAGAAATAGATGGTaGTGGAGCGCTGATACACCT +
Preference number: 5 (lower is better)
Translates to: PFGRFKQHLVPLTVNDHESRNRW*WSADTP
Trigger: AGGTGTATCAGCGCTCCACAACCATCTATTTCTACT...TTCATGATCGTTTACAGTCAATGGAACAAGGTGTTGCTTGAATCGGCCAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp AGTCATACTTCTCTGTCTCAACTTTATATGCACCATTCTTCTTCGTaGGGAGTGACAAATCAAAGGAAAACCCTGCCTGGGCATCAAGGA +
Preference number: 5 (lower is better)
Translates to: SHTSLSQLYMHHSSS*GVTNQRKTLPGHQG
Trigger: TCCTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAGAATGGTGCATATAAAGTTGAGACAGAGAAGTATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 90 bp GTCATAGGTCTTATGCTTCTGAACAAACTTGCACTCCATCTTCTTTaGAGGGCAGACAACTTTTGTCTTCCACTCAAATGTCACCTCACA +
Preference number: 5 (lower is better)
Translates to: VIGLMLLNKLALHLL*RADNFCLPLKCHLT
Trigger: TGTGAGGTGACATTTGAGTGGAAGACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCAAGTTTGTTCAGAAGCATAAGACCTATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp ATATTGAACACAAAAGTCTTTCCGATGCCTAAGACCACATGTCCTTaGGCAGAATCGTTGAGTGGGCTAAGATTAAACACAAACCCACTG +
Preference number: 5 (lower is better)
Translates to: ILNTKVFPMPKTTCP*AESLSGLRLNTNPL
Trigger: CAGTGGGTTTGTGTTTAATCTTAGCCCACTCAACGATTCTGCTCAAGGACATGTGGTCTTAGGCATCGGAAAGACTTTTGTGTTCAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 90 bp ACAGCTGGAAATACCCACATTTCCACAGACGTTGATCTTATAAACTaGATTGTTTTTGGAGTCAACAGCTTCCCATGTGTAACTGCACAG +
Preference number: 5 (lower is better)
Translates to: TAGNTHISTDVDLIN*IVFGVNSFPCVTAQ
Trigger: CTGTGCAGTTACACATGGGAAGCTGTTGACTCCAAAAACAATGCAGTTTATAAGATCAACGTCTGTGGAAATGTGGGTATTTCCAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 90 bp ACGTGTCAGGATCAGAATCATCTACCAGATAGCCACCATTTAGCTTaGTCAGTGGGTTTAAATCATGCTTCTGTAACTTGTCATCAAATG +
Preference number: 5 (lower is better)
Translates to: TCQDQNHLPDSHHLA*SVGLNHASVTCHQM
Trigger: CATTTGATGACAAGTTACAGAAGCATGATTTAAACCCACTGATCAAGCTAAATGGTGGCTATCTGGTAGATGATTCTGATCCTGACACGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GAGAATTACAATGCTAAAAATATAAATGGTCACCCCGTAGGGTCTAAAGCAGCAATCTTCACTGAACACTaGTGGTCTCCCAATATCTTC +
Preference number: 5 (lower is better)
Translates to: ENYNAKNINGHPVGSKAAIFTEH*WSPNIF
Trigger: GAAGATATTGGGAGACCACAAGTGTTCAGTGAAGAT...TGCTGCTTTAGACCCTACGGGGTGACCATTTATATTTTTAGCATTGTAATTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS-3UTR CAA 90 bp GTCACCCTGTGCAAATTAAGGCTTCTTATAGGTCGAATGGGTGATAAACATTTTATTGCACCACAGATATaGAACACAAAAGTCTTTCCG +
Preference number: 5 (lower is better)
Translates to: VTLCKLRLLIGRMGDKHFIAPQI*NTKVFP
Trigger: CGGAAAGACTTTTGTGTTCAATATCTGTGGTGCAAT...AAAATGTTTATCACCCATTCGACCTATAAGAAGCCTTAATTTGCACAGGGTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CCAGCAAGCAGCCAGTCAGCGCCACCAGGAGAAGACTaGGGACTGCCCCAACAGCCTGACTCCGCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: PASSQSAPPGED*GLPQQPDSALR
Trigger: TCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTTCTCCTGGTGGCGCTGACTGGCTGCTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GTGAGCCCGACGTCTGGGCACACTCGAACACGATCCTaGTGGAGAAGCGCTGGTCCCCACATCTGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: VSPTSGHTRTRS*WRSAGPHICPH
Trigger: ATGGGGACAGATGTGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp ATCTATAGGGGGCCCGTCCACAGGAACTTTGCATACTaGGGCACCTGCAGGGCAGGGCACTCCGTGCATGGG +
Preference number: 6 (lower is better)
Translates to: IYRGPVHRNFAY*GTCRAGHSVHG
Trigger: CCCATGCACGGAGTGCCCTGCCCTGCAGGTGCCTCAGTATGCAAAGTTCCTGTGGACGGGCCCCCTATAGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GCTTGGCAGGGGCTGTTGGCTTGCGCTGTCCGGGTCTaGACTTCCCTTTTCTGGCCTTCTCACCTCGGACCA +
Preference number: 6 (lower is better)
Translates to: AWQGLLACAVRV*TSLFWPSHLGP
Trigger: TGGTCCGAGGTGAGAAGGCCAGAAAAGGGAAGTTCAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp AGCCCGACGTCTGGGCACACTCGAACACGATCCTGGTaGAGAAGCGCTGGTCCCCACATCTGTCCCCATTCA +
Preference number: 6 (lower is better)
Translates to: SPTSGHTRTRSW*RSAGPHICPHS
Trigger: TGAATGGGGACAGATGTGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp AGGTCTTCGTCGCTGTCATCATGGAAGGACACCAGCTaGGCAGGGGCTGTTGGCTTGCGCTGTCCGGGTCTG +
Preference number: 6 (lower is better)
Translates to: RSSSLSSWKDTS*AGAVGLRCPGL
Trigger: CAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCCATGATGACAGCGACGAAGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GGTCACCTCCTGAGGCCTCACCGCGCAGGCAGCCCGTaGGTACCAGTAAAAGTAGTAGGTGCAGCTGACACT +
Preference number: 6 (lower is better)
Translates to: GHLLRPHRAGSP*VPVKVVGAADT
Trigger: AGTGTCAGCTGCACCTACTACTTTTACTGGTACTCACGGGCTGCCTGCGCGGTGAGGCCTCAGGAGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GGCTGTGAGCTTTCCACCTCCGCTCCTCGGCCTGAGTaGACTTTCACCTCTGGAACGGTCAGGACCTCATCC +
Preference number: 6 (lower is better)
Translates to: GCELSTSAPRPE*TFTSGTVRTSS
Trigger: GGATGAGGTCCTGACCGTTCCAGAGGTGAAAGTTCACTCAGGCCGAGGAGCGGAGGTGGAAAGCTCACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CTTTGTTCCCAGAGAGCAGACAGACACCGCCATCCTTaGAGCCTTCCTGGCCTAAGCCAGCTGCTGCTGTGC +
Preference number: 6 (lower is better)
Translates to: LCSQRADRHRHP*SLPGLSQLLLC
Trigger: GCACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTCTGGGAACAAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CGAGCCTGTCCTTGCTCAACAGCTTCAGCCCCTCCTTaGGTCGGCCAACGTCAAATGCCTGGTTCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: RACPCSTASAPP*VGQRQMPGSPS
Trigger: TGAAGGGGAACCAGGCATTTGACGTTGGCCGACCCAAGGAGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GAGAGCAGACAGACACCGCCATCCTTGCAGCCTTCCTaGCCTAAGCCAGCTGCTGCTGTGCACACCCCTATA +
Preference number: 6 (lower is better)
Translates to: ESRQTPPSLQPS*PKPAAAVHTPI
Trigger: TATAGGGGTGTGCACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ACGAGCCTGTCCTTGCTCAACAGCTTCAGCCCCTCCTaGGGTCGGCCAACGTCAAATGCCTGGTTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: TSLSLLNSFSPS*GRPTSNAWFPF
Trigger: GAAGGGGAACCAGGCATTTGACGTTGGCCGACCCAAGGAGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CCAGCCTCAGGCCGGCACACAAAGCTGATGACACTCTaGTACCTCAGGTCTGACAGGGAAGGGCATGGGGAC +
Preference number: 6 (lower is better)
Translates to: PASGRHTKLMTL*YLRSDREGHGD
Trigger: GTCCCCATGCCCTTCCCTGTCAGACCTGAGGTACAAGAGTGTCATCAGCTTTGTGTGCCGGCCTGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CACGTCTGCTTGTCCAAGGAGATGAGCATCGGCCTGTaGGTAGGTCCAGCCTCAGGCCGGCACACAAAGCTG +
Preference number: 6 (lower is better)
Translates to: HVCLSKEMSIGL*VGPASGRHTKL
Trigger: CAGCTTTGTGTGCCGGCCTGAGGCTGGACCTACCAACAGGCCGATGCTCATCTCCTTGGACAAGCAGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CTGCCAATATCTATAGGGGGCCCGTCCACAGGAACTTaGCATACTGAGGCACCTGCAGGGCAGGGCACTCCG +
Preference number: 6 (lower is better)
Translates to: LPISIGGPSTGT*HTEAPAGQGTP
Trigger: CGGAGTGCCCTGCCCTGCAGGTGCCTCAGTATGCAAAGTTCCTGTGGACGGGCCCCCTATAGATATTGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CCTTTGTTCCCAGAGAGCAGACAGACACCGCCATCCTaGCAGCCTTCCTGGCCTAAGCCAGCTGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PLFPESRQTPPS*QPSWPKPAAAV
Trigger: CACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTCTGGGAACAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TCATGGAAGGACACCAGCTTGGCAGGGGCTGTTGGCTaGCGCTGTCCGGGTCTGAACTTCCCTTTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: SWKDTSLAGAVG*RCPGLNFPFLA
Trigger: GGCCAGAAAAGGGAAGTTCAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CAGTGGCCCCTGTCCTGGTCACAGCCTCCCAGTTGTCACTGTACCTaGACAGTGAGGAGAGGTCAATGGAGTTGCCAGCCGCATCCTGGA +
Preference number: 6 (lower is better)
Translates to: QWPLSWSQPPSCHCT*TVRRGQWSCQPHPG
Trigger: TCCAGGATGCGGCTGGCAACTCCATTGACCTCTCCTCACTGTCAAGGTACAGTGACAACTGGGAGGCTGTGACCAGGACAGGGGCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AGGTGGCCTGTGCTGGGGTTGGTGACTTGGCAGTCATCATGTGTGTaGCTCTTCACAGGACAGGCAGAAGGGGTGGGCCAGGAGAAGGTG +
Preference number: 6 (lower is better)
Translates to: RWPVLGLVTWQSSCV*LFTGQAEGVGQEKV
Trigger: CACCTTCTCCTGGCCCACCCCTTCTGCCTGTCCTGTGAAGAGCAACACACATGATGACTGCCAAGTCACCAACCCCAGCACAGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CAGGCCAGGGGTGTGTGCCAGGAGAAGAAGAGTGTGCACGTCTGCTaGTCCAAGGAGATGAGCATCGGCCTGTTGGTAGGTCCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: QARGVCQEKKSVHVC*SKEMSIGLLVGPAS
Trigger: TGAGGCTGGACCTACCAACAGGCCGATGCTCATCTCCTTGGACAAGCAGACGTGCACACTCTTCTTCTCCTGGCACACACCCCTGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CCTGTGACTCTGCCAATATCTATAGGGGGCCCGTCCACAGGAACTTaGCATACTGAGGCACCTGCAGGGCAGGGCACTCCGTGCATGGGA +
Preference number: 6 (lower is better)
Translates to: PVTLPISIGGPSTGT*HTEAPAGQGTPCMG
Trigger: TCCCATGCACGGAGTGCCCTGCCCTGCAGGTGCCTCAGTATGCAAAGTTCCTGTGGACGGGCCCCCTATAGATATTGGCAGAGTCACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AAAGAAGCTCCTTTGTTCCCAGAGAGCAGACAGACACCGCCATCCTaGCAGCCTTCCTGGCCTAAGCCAGCTGCTGCTGTGCACACCCCT +
Preference number: 6 (lower is better)
Translates to: KEAPLFPESRQTPPS*QPSWPKPAAAVHTP
Trigger: AGGGGTGTGCACAGCAGCAGCTGGCTTAGGCCAGGAAGGCTGCAAGGATGGCGGTGTCTGTCTGCTCTCTGGGAACAAAGGAGCTTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp TCGCTGTCATCATGGAAGGACACCAGCTTGGCAGGGGCTGTTGGCTaGCGCTGTCCGGGTCTGAACTTCCCTTTTCTGGCCTTCTCACCT +
Preference number: 6 (lower is better)
Translates to: SLSSWKDTSLAGAVG*RCPGLNFPFLAFSP
Trigger: AGGTGAGAAGGCCAGAAAAGGGAAGTTCAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCCATGATGACAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GACCACAGACAAGATGGATCCTGGTGCTGTAGGTGGTaGGCTGGCCATCACTGGTGGTGCAAGCAGAGCCGT +
Preference number: 6 (lower is better)
Translates to: DHRQDGSWCCRW*AGHHWWCKQSR
Trigger: ACGGCTCTGCTTGCACCACCAGTGATGGCCAGCTCACCACCTACAGCACCAGGATCCATCTTGTCTGTGGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GCCACCAGGAGAAGACTGAGGACTGCCCCAACAGCCTaGCTCCGCTCTGAGAGTCCTTTATACTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: ATRRRLRTAPTA*LRSESPLYSGP
Trigger: AGGGCCAGAGTATAAAGGACTCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTTCTCCTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AGGCAGCAGTGCCAGCAGGACAGACTCTCAGCTGTGTaGTGGGGTCCCGAAGGGAGTCTATGTCTCTACACA +
Preference number: 6 (lower is better)
Translates to: RQQCQQDRLSAV*WGPEGSLCLYT
Trigger: TGTGTAGAGACATAGACTCCCTTCGGGACCCCAGCACACAGCTGAGAGTCTGTCCTGCTGGCACTGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GTTCACAGGCTTAGAGCCATTCAGCAGACAAACAGCTaGCTCTGGAGGGCATGGCTCTGTGCCAGCGTGTGG +
Preference number: 6 (lower is better)
Translates to: VHRLRAIQQTNS*LWRAWLCASVW
Trigger: CCACACGCTGGCACAGAGCCATGCCCTCCAGAGGCAGCTGTTTGTCTGCTGAATGGCTCTAAGCCTGTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp ATCGAGCTTCCATTCCGCACAGTACACTCCGTCGCTTaGTCACAGGCCAGGGGTGTGTGCCAGGAGAAGAAG +
Preference number: 6 (lower is better)
Translates to: IELPFRTVHSVA*SQARGVCQEKK
Trigger: CTTCTTCTCCTGGCACACACCCCTGGCCTGTGAGCAAGCGACGGAGTGTACTGTGCGGAATGGAAGCTCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CAGCAGTGCCAGCAGGACAGACTCTCAGCTGTGTGCTaGGGTCCCGAAGGGAGTCTATGTCTCTACACACGT +
Preference number: 6 (lower is better)
Translates to: QQCQQDRLSAVC*GPEGSLCLYTR
Trigger: ACGTGTGTAGAGACATAGACTCCCTTCGGGACCCCAGCACACAGCTGAGAGTCTGTCCTGCTGGCACTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp ATCTTCTATCTGAGTTTCGGCCTCGCAGCCATAGGCTaGCTTCCCCGCAACCGTTCCACAGGCAGGCATTGC +
Preference number: 6 (lower is better)
Translates to: IFYLSFGLAAIG*LPRNRSTGRHC
Trigger: GCAATGCCTGCCTGTGGAACGGTTGCGGGGAAGCCAGCCTATGGCTGCGAGGCCGAAACTCAGATAGAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TGGGCACACTCGAACACGATCCTGGTGGAGAAGCGCTaGTCCCCACATCTGTCCCCATTCACGTACAGGATG +
Preference number: 6 (lower is better)
Translates to: WAHSNTILVEKR*SPHLSPFTYRM
Trigger: CATCCTGTACGTGAATGGGGACAGATGTGGGGACCAGCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GCCATTCAGCAGACAAACAGCTGCCTCTGGAGGGCATaGCTCTGTGCCAGCGTGTGGAGACAGAGACTTGCA +
Preference number: 6 (lower is better)
Translates to: AIQQTNSCLWRA*LCASVWRQRLA
Trigger: TGCAAGTCTCTGTCTCCACACGCTGGCACAGAGCCATGCCCTCCAGAGGCAGCTGTTTGTCTGCTGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CAGGTACTGGCAGTCAGCGGTCTCGTGGCTGAACTCTaGGATCCCATCCTTCACCAGAGGGTCACAGTGGAA +
Preference number: 6 (lower is better)
Translates to: QVLAVSGLVAEL*DPILHQRVTVE
Trigger: TTCCACTGTGACCCTCTGGTGAAGGATGGGATCCCAGAGTTCAGCCACGAGACCGCTGACTGCCAGTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TACCAGGAGAACAGGTACTGGCAGTCAGCGGTCTCGTaGCTGAACTCTGGGATCCCATCCTTCACCAGAGGG +
Preference number: 6 (lower is better)
Translates to: YQENRYWQSAVS*LNSGIPSFTRG
Trigger: CCCTCTGGTGAAGGATGGGATCCCAGAGTTCAGCCACGAGACCGCTGACTGCCAGTACCTGTTCTCCTGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AAGAGTGTGCACGTCTGCTTGTCCAAGGAGATGAGCATCGGCCTGTaGGTAGGTCCAGCCTCAGGCCGGCACACAAAGCTGATGACACTC +
Preference number: 6 (lower is better)
Translates to: KSVHVCLSKEMSIGL*VGPASGRHTKLMTL
Trigger: GAGTGTCATCAGCTTTGTGTGCCGGCCTGAGGCTGGACCTACCAACAGGCCGATGCTCATCTCCTTGGACAAGCAGACGTGCACACTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp ATGTGTAAGAGGTCTTCGTCGCTGTCATCATGGAAGGACACCAGCTaGGCAGGGGCTGTTGGCTTGCGCTGTCCGGGTCTGAACTTCCCT +
Preference number: 6 (lower is better)
Translates to: MCKRSSSLSSWKDTS*AGAVGLRCPGLNFP
Trigger: AGGGAAGTTCAGACCCGGACAGCGCAAGCCAACAGCCCCTGCCAAGCTGGTGTCCTTCCATGATGACAGCGACGAAGACCTCTTACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp AAGACTGAGGACTGCCCCAACAGCCTGACTCCGCTCTaGGAGTCCTTTATACTCTGGCCCTGCGCTCTCATC +
Preference number: 6 (lower is better)
Translates to: KTEDCPNSLTPL*ESFILWPCALI
Trigger: GATGAGAGCGCAGGGCCAGAGTATAAAGGACTCTCAGAGCGGAGTCAGGCTGTTGGGGCAGTCCTCAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CATTGTTTTTGGAGTCAACAGCTTCCCATGTGTAACTaGACAGGGCGTCCAAGTCGACGGCCTGGGCCTGCG +
Preference number: 6 (lower is better)
Translates to: HCFWSQQLPMCN*TGRPSRRPGPA
Trigger: CGCAGGCCCAGGCCGTCGACTTGGACGCCCTGTGCAGTTACACATGGGAAGCTGTTGACTCCAAAAACAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CAATGCCGTGGCAGCCAGGGATATAAGGCAGAGGGTTaGAGACACTCAGGTAGAAGTGCCTCCTCTTCCCGT +
Preference number: 6 (lower is better)
Translates to: QCRGSQGYKAEG*RHSGRSASSSR
Trigger: ACGGGAAGAGGAGGCACTTCTACCTGAGTGTCTGCAACCCTCTGCCTTATATCCCTGGCTGCCACGGCATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp ATTGGGCTTCACCTGGCAGATGTTGGCACCAGCGCATaGAGGGTAAGAAGAGCTGGTGATGGAGGAGAGCTG +
Preference number: 6 (lower is better)
Translates to: IGLHLADVGTSA*RVRRAGDGGEL
Trigger: CAGCTCTCCTCCATCACCAGCTCTTCTTACCCTGCATGCGCTGGTGCCAACATCTGCCAGGTGAAGCCCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GTCCTGGTCGTCCCCATGCAGGGACGAGAGAGCTTCTaGTTTCACCGCCTTGGTGGTGATATGGCCATTTTC +
Preference number: 6 (lower is better)
Translates to: VLVVPMQGRESF*FHRLGGDMAIF
Trigger: GAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTCGTCCCTGCATGGGGACGACCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GGAGGGGTCTGTCACCATGCACTCCAGGGGTTCTTCTaGGCAGGCATAACTGGTGTACCACCGGAAGTTGTA +
Preference number: 6 (lower is better)
Translates to: GGVCHHALQGFF*AGITGVPPEVV
Trigger: TACAACTTCCGGTGGTACACCAGTTATGCCTGCCCAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTGTTCACGAACTGGAACATAGGTGAGCCCGACGTCTaGGCACACTCGAACACGATCCTGGTGGAGAAGCGC +
Preference number: 6 (lower is better)
Translates to: LFTNWNIGEPDV*AHSNTILVEKR
Trigger: GCGCTTCTCCACCAGGATCGTGTTCGAGTGTGCCCAGACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GCCTTGGTGGTGATATGGCCATTTTCTTGCCCGTCCTaGCCTAGTCTTGGGGCTGGCACCTGGATCTCTTCC +
Preference number: 6 (lower is better)
Translates to: ALVVIWPFSCPS*PSLGAGTWISS
Trigger: GGAAGAGATCCAGGTGCCAGCCCCAAGACTAGGCAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CTGACGATGGTGTCATTGAGGCCCAGGGGCTTCAGGTCATACAAATaGCCATGCCTGGGGTCCTTCACCTGGCAGTTGTCTCCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LTMVSLRPRGFRSYK*PCLGSFTWQLSPSS
Trigger: AGAGGAAGGAGACAACTGCCAGGTGAAGGACCCCAGGCATGGCAATTTGTATGACCTGAAGCCCCTGGGCCTCAATGACACCATCGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp GCTTTCACCGCCTTGGTGGTGATATGGCCATTTTCTTGCCCGTCCTaGCCTAGTCTTGGGGCTGGCACCTGGATCTCTTCCATCAGCCAT +
Preference number: 6 (lower is better)
Translates to: AFTALVVIWPFSCPS*PSLGAGTWISSISH
Trigger: ATGGCTGATGGAAGAGATCCAGGTGCCAGCCCCAAGACTAGGCAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GGGACGAGAGAGCTTCTGCTTTCACCGCCTTGGTGGTaGTATGGCCATTTTCTTGCCCGTCCTTGCCTAGTC +
Preference number: 6 (lower is better)
Translates to: GTRELLLSPPWW*YGHFLARPCLV
Trigger: GACTAGGCAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CCTCTTCCTTCACATAAGTCAGAACGAGCCTGTCCTTaGTCAACAGCTTCAGCCCCTCCTTGGGTCGGCCAA +
Preference number: 6 (lower is better)
Translates to: PLPSHKSERACP*STASAPPWVGQ
Trigger: TTGGCCGACCCAAGGAGGGGCTGAAGCTGTTGAGCAAGGACAGGCTCGTTCTGACTTATGTGAAGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GGTCATACTGTTCCATCATGGAGGGGTCTGTCACCATaGACTCCAGGGGTTCTTCTGGGCAGGCATAACTGG +
Preference number: 6 (lower is better)
Translates to: GHTVPSWRGLSP*TPGVLLGRHNW
Trigger: CCAGTTATGCCTGCCCAGAAGAACCCCTGGAGTGCATGGTGACAGACCCCTCCATGATGGAACAGTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp TGTTGTCTTCTGACACCATGCAGGACCCCAATGCAATaGCGTGGCAGCCAGGGATATAAGGCAGAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: CCLLTPCRTPMQ*RGSQGYKAEGC
Trigger: GCAACCCTCTGCCTTATATCCCTGGCTGCCACGGCATTGCATTGGGGTCCTGCATGGTGTCAGAAGACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GTGTCATTGAGGCCCAGGGGCTTCAGGTCATACAAATaGCCATGCCTGGGGTCCTTCACCTGGCAGTTGTCT +
Preference number: 6 (lower is better)
Translates to: VSLRPRGFRSYK*PCLGSFTWQLS
Trigger: AGACAACTGCCAGGTGAAGGACCCCAGGCATGGCAATTTGTATGACCTGAAGCCCCTGGGCCTCAATGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CCATGCAGGGACGAGAGAGCTTCTGCTTTCACCGCCTaGGTGGTGATATGGCCATTTTCTTGCCCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: PCRDERASAFTA*VVIWPFSCPSL
Trigger: CAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTCGTCCCTGCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CTTACCACTTTTCGCTACCTGGCAGGCCCCCGAGTTTaGCTGACAAGGATCCATGGATACAGGGCCACAAAC +
Preference number: 6 (lower is better)
Translates to: LTTFRYLAGPRV*LTRIHGYRATN
Trigger: GTTTGTGGCCCTGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGCCAGGTAGCGAAAAGTGGTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp TGCCAGCCGCATCCTGGACAGAACACTCTGTCACATTaGAAGGTGGGCAGGCATACTGTGTTCGCCACTCAA +
Preference number: 6 (lower is better)
Translates to: CQPHPGQNTLSH*KVGRHTVFATQ
Trigger: TTGAGTGGCGAACACAGTATGCCTGCCCACCTTTCAATGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CGCCACACAAACACATACTCACAGTTGTTCACGAACTaGAACATAGGTGAGCCCGACGTCTGGGCACACTCG +
Preference number: 6 (lower is better)
Translates to: RHTNTYSQLFTN*NIGEPDVWAHS
Trigger: CGAGTGTGCCCAGACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAACTGTGAGTATGTGTTTGTGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTTTCCTGGCATGATGAGACTGCCTTGGATCCGTCATaGGCAGAGCAGACATCTGATGACAGCTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: FSWHDETALDPS*AEQTSDDSFPQ
Trigger: CTGCGGGAAGCTGTCATCAGATGTCTGCTCTGCCCATGACGGATCCAAGGCAGTCTCATCATGCCAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GAGAGAGCTTCTGCTTTCACCGCCTTGGTGGTGATATaGCCATTTTCTTGCCCGTCCTTGCCTAGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: ERASAFTALVVI*PFSCPSLPSLG
Trigger: CCCAAGACTAGGCAAGGACGGGCAAGAAAATGGCCATATCACCACCAAGGCGGTGAAAGCAGAAGCTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CCACTTTTCGCTACCTGGCAGGCCCCCGAGTTTGACTaGCAAGGATCCATGGATACAGGGCCACAAACATTT +
Preference number: 6 (lower is better)
Translates to: PLFATWQAPEFD*QGSMDTGPQTF
Trigger: AAATGTTTGTGGCCCTGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGCCAGGTAGCGAAAAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GCACACAAAGCTGATGACACTCTTGTACCTCAGGTCTaGCAGGGAAGGGCATGGGGACCCATTCTCATACAC +
Preference number: 6 (lower is better)
Translates to: AHKADDTLVPQV*QGRAWGPILIH
Trigger: GTGTATGAGAATGGGTCCCCATGCCCTTCCCTGTCAGACCTGAGGTACAAGAGTGTCATCAGCTTTGTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GGCTGGCTTCCCCGCAACCGTTCCACAGGCAGGCATTaGACCACAGATATTGAACACAAAAGTCTTTCCGAT +
Preference number: 6 (lower is better)
Translates to: GWLPRNRSTGRH*TTDIEHKSLSD
Trigger: ATCGGAAAGACTTTTGTGTTCAATATCTGTGGTGCAATGCCTGCCTGTGGAACGGTTGCGGGGAAGCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CACTGTACCTTGACAGTGAGGAGAGGTCAATGGAGTTaGCAGCCGCATCCTGGACAGAACACTCTGTCACAT +
Preference number: 6 (lower is better)
Translates to: HCTLTVRRGQWS*QPHPGQNTLSH
Trigger: ATGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCAACTCCATTGACCTCTCCTCACTGTCAAGGTACAGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GTAGTAGGTGCAGCTGACACTGTCAAACCTCTTGAATaGAGGCCTGCCCACAGTCTTCGCACAGGTCAATTC +
Preference number: 6 (lower is better)
Translates to: VVGAADTVKPLE*RPAHSLRTGQF
Trigger: GAATTGACCTGTGCGAAGACTGTGGGCAGGCCTGCATTCAAGAGGTTTGACAGTGTCAGCTGCACCTACTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GCCACTTTCTGGAATCCCTGTGGTCCTTTCTTTTCCTaGCATGATGAGACTGCCTTGGATCCGTCATGGGCA +
Preference number: 6 (lower is better)
Translates to: ATFWNPCGPFFS*HDETALDPSWA
Trigger: TGCCCATGACGGATCCAAGGCAGTCTCATCATGCCAGGAAAAGAAAGGACCACAGGGATTCCAGAAAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GTCATGTCAGAGGTGCCTACTTTCCTGCTGAAATGCTaGTCATTGGGCTTCACCTGGCAGATGTTGGCACCA +
Preference number: 6 (lower is better)
Translates to: VMSEVPTFLLKC*SLGFTWQMLAP
Trigger: TGGTGCCAACATCTGCCAGGTGAAGCCCAATGACCAGCATTTCAGCAGGAAAGTAGGCACCTCTGACATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ACTTACCACTTTTCGCTACCTGGCAGGCCCCCGAGTTaGACTGACAAGGATCCATGGATACAGGGCCACAAA +
Preference number: 6 (lower is better)
Translates to: TYHFSLPGRPPS*TDKDPWIQGHK
Trigger: TTTGTGGCCCTGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGCCAGGTAGCGAAAAGTGGTAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GCCTCCACTGTTCGCCACACAAACACATACTCACAGTaGTTCACGAACTGGAACATAGGTGAGCCCGACGTC +
Preference number: 6 (lower is better)
Translates to: ASTVRHTNTYSQ*FTNWNIGEPDV
Trigger: GACGTCGGGCTCACCTATGTTCCAGTTCGTGAACAACTGTGAGTATGTGTTTGTGTGGCGAACAGTGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TCACTGTACCTTGACAGTGAGGAGAGGTCAATGGAGTaGCCAGCCGCATCCTGGACAGAACACTCTGTCACA +
Preference number: 6 (lower is better)
Translates to: SLYLDSEERSME*PAASWTEHSVT
Trigger: TGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCAACTCCATTGACCTCTCCTCACTGTCAAGGTACAGTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp TCCCAGTTGTCACTGTACCTTGACAGTGAGGAGAGGTCAATGGAGTaGCCAGCCGCATCCTGGACAGAACACTCTGTCACATTGAAAGGT +
Preference number: 6 (lower is better)
Translates to: SQLSLYLDSEERSME*PAASWTEHSVTLKG
Trigger: ACCTTTCAATGTGACAGAGTGTTCTGTCCAGGATGCGGCTGGCAACTCCATTGACCTCTCCTCACTGTCAAGGTACAGTGACAACTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CCACCACAGGGCCTATCTTTGCAACTCCCAAGTTACTaGTGGATACAGTCTCTGCCAAGGAGCCCTCATGAT +
Preference number: 6 (lower is better)
Translates to: PPQGLSLQLPSY*WIQSLPRSPHD
Trigger: ATCATGAGGGCTCCTTGGCAGAGACTGTATCCATCAGTAACTTGGGAGTTGCAAAGATAGGCCCTGTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GATCTGCACCACACCCAAGTTAAAACTGTTGTCTTCTaGCACCATGCAGGACCCCAATGCAATGCCGTGGCA +
Preference number: 6 (lower is better)
Translates to: DLHHTQVKTVVF*HHAGPQCNAVA
Trigger: TGCCACGGCATTGCATTGGGGTCCTGCATGGTGTCAGAAGACAACAGTTTTAACTTGGGTGTGGTGCAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp ACGAGTTTCCTTCATGCACAAAGTCCCAGGACCCCGTaGGGGATGAGAGCAGTCGCAAGTCATAGGTCTTAT +
Preference number: 6 (lower is better)
Translates to: TSFLHAQSPRTP*GMRAVASHRSY
Trigger: ATAAGACCTATGACTTGCGACTGCTCTCATCCCTCACGGGGTCCTGGGACTTTGTGCATGAAGGAAACTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp TGTTGGCACCAGCGCATGCAGGGTAAGAAGAGCTGGTaGTGGAGGAGAGCTGGATTTCATACAGGTAGTTGT +
Preference number: 6 (lower is better)
Translates to: CWHQRMQGKKSW*WRRAGFHTGSC
Trigger: ACAACTACCTGTATGAAATCCAGCTCTCCTCCATCACCAGCTCTTCTTACCCTGCATGCGCTGGTGCCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AATCAAAGGAAAACCCTGCCTGGGCATCAAGGACCGTaGAGTTCTCTCCTTCTGTCTTCGACAGTACACAGG +
Preference number: 6 (lower is better)
Translates to: NQRKTLPGHQGP*SSLLLSSTVHR
Trigger: CCTGTGTACTGTCGAAGACAGAAGGAGAGAACTGCACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp TGCTTCATCTTGGTGCCTGTAATCCAGCTGCATCGATaGAAGGCGCCCAAAAGAAGCTCCTTTGTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: CFILVPVIQLHR*KAPKRSSFVPR
Trigger: TCTGGGAACAAAGGAGCTTCTTTTGGGCGCCTTGCATCGATGCAGCTGGATTACAGGCACCAAGATGAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp TCTGCAGAAGCCCCACTCGTGGTCACGATCATAATTTaGAGTTTTGCTACACCACAGTTTCGCTCGTCCCTC +
Preference number: 6 (lower is better)
Translates to: SAEAPLVVTIII*SFATPQFRSSL
Trigger: GAGGGACGAGCGAAACTGTGGTGTAGCAAAACTGCAAATTATGATCGTGACCACGAGTGGGGCTTCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AAACCTGGACTTGACCAGTGGCACTCTTCTTGCAAATaGTGGCTCTTTCAGAGCAGTCCAGGGGACCTTTGT +
Preference number: 6 (lower is better)
Translates to: KPGLDQWHSSCK*WLFQSSPGDLC
Trigger: ACAAAGGTCCCCTGGACTGCTCTGAAAGAGCCAGCATTTGCAAGAAGAGTGCCACTGGTCAAGTCCAGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AGCTTGTTTATCACAGTTTCCCTTCTCTCCTTCTTATaGAGCAGTAAGGCCAGCAAGCAGCCAGTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SLFITVSLLSFL*SSKASKQPVSA
Trigger: GGCGCTGACTGGCTGCTTGCTGGCCTTACTGCTGCATAAGAAGGAGAGAAGGGAAACTGTGATAAACAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp AGTGAGTTTAGGAATGGTACCCTCTCTCCGCTCAGATaGGCACACAAATGTTACTGTCACTGCAGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SEFRNGTLSPLR*AHKCYCHCRAV
Trigger: CACAGCCCTGCAGTGACAGTAACATTTGTGTGCCCATCTGAGCGGAGAGAGGGTACCATTCCTAAACTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTCGTGAGGAGTGACAAATCAAAGGAAAACCCTGCCTaGGCATCAAGGACCGTGCAGTTCTCTCCTTCTGTC +
Preference number: 6 (lower is better)
Translates to: FVRSDKSKENPA*ASRTVQFSPSV
Trigger: GACAGAAGGAGAGAACTGCACGGTCCTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp ACTTCACTAGACTGGAGAGGTCATACTGTTCCATCATaGAGGGGTCTGTCACCATGCACTCCAGGGGTTCTT +
Preference number: 6 (lower is better)
Translates to: TSLDWRGHTVPS*RGLSPCTPGVL
Trigger: AAGAACCCCTGGAGTGCATGGTGACAGACCCCTCCATGATGGAACAGTATGACCTCTCCAGTCTAGTGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp AGTTTCCTCCAGAGCCACCTTCAGACTTCACTAGACTaGAGAGGTCATACTGTTCCATCATGGAGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SFLQSHLQTSLD*RGHTVPSWRGL
Trigger: CAGACCCCTCCATGATGGAACAGTATGACCTCTCCAGTCTAGTGAAGTCTGAAGGTGGCTCTGGAGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTTCATCTGGCAAGCAGATGCATATCGATCGCAGCCTaGCACAGGATTCAGAGGCCGACACACATTGAGGTA +
Preference number: 6 (lower is better)
Translates to: FHLASRCISIAA*HRIQRPTHIEV
Trigger: TACCTCAATGTGTGTCGGCCTCTGAATCCTGTGCCAGGCTGCGATCGATATGCATCTGCTTGCCAGATGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CCATTGATGGCCCCGCAGAGGAGGTCTTCCTTCTCTTaGATGCAGGCGTATTTAGTGTCCCATGTGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PLMAPQRRSSFS*MQAYLVSHVKK
Trigger: CTTCTTCACATGGGACACTAAATACGCCTGCATCAAAGAGAAGGAAGACCTCCTCTGCGGGGCCATCAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TGTGGTCCTTTCTTTTCCTGGCATGATGAGACTGCCTaGGATCCGTCATGGGCAGAGCAGACATCTGATGAC +
Preference number: 6 (lower is better)
Translates to: CGPFFSWHDETA*DPSWAEQTSDD
Trigger: GTCATCAGATGTCTGCTCTGCCCATGACGGATCCAAGGCAGTCTCATCATGCCAGGAAAAGAAAGGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ACCCCTATACTGTATGTGCGGGCATCCCGAGTAACCTaGAAAGTGCTTGTGGAAAGGCTGGTCAGGTTGAAG +
Preference number: 6 (lower is better)
Translates to: TPILYVRASRVT*KVLVERLVRLK
Trigger: CTTCAACCTGACCAGCCTTTCCACAAGCACTTTCAAGGTTACTCGGGATGCCCGCACATACAGTATAGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CAGCAGCCGTATGCCACTCAAACTCATAGAAGCAGCCATCAGATCTaGCAGCTCTTAGCACTGGAGCACTTTCTAGATCACCTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: QQPYATQTHRSSHQI*QLLALEHFLDHLVC
Trigger: GCAAACCAGGTGATCTAGAAAGTGCTCCAGTGCTAAGAGCTGCAAGATCTGATGGCTGCTTCTATGAGTTTGAGTGGCATACGGCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp GGACAGACAATCGGAGTCTCCCACTCAAACACAAAGTCGCAGTCATaGGTCCTTATCAGCTTAGGAGTTCCCATGCTGACTCCTCTCTTG +
Preference number: 6 (lower is better)
Translates to: GQTIGVSHSNTKSQS*VLISLGVPMLTPLL
Trigger: CAAGAGAGGAGTCAGCATGGGAACTCCTAAGCTGATAAGGACCAATGACTGCGACTTTGTGTTTGAGTGGGAGACTCCGATTGTCTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CCCACACTTGGAGGAAGAGGTAAACACCACATCCAGATCTCCATCTaGGACGTAGTACTTGGTCATGTCAGAGGTGCCTACTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: PTLGGRGKHHIQISI*DVVLGHVRGAYFPA
Trigger: AGCAGGAAAGTAGGCACCTCTGACATGACCAAGTACTACGTCCAAGATGGAGATCTGGATGTGGTGTTTACCTCTTCCTCCAAGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GATGGGCACACAAATGTTACTGTCACTGCAGGGCTGTaGCCATTACAGAAGTCTGGCTTTTCTCCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: DGHTNVTVTAGL*PLQKSGFSPSS
Trigger: GGAAGAGGGAGAAAAGCCAGACTTCTGTAATGGTCACAGCCCTGCAGTGACAGTAACATTTGTGTGCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CACTTTGCAGGTAATCTCTGTGGCAGGCATACTCGGTaGTCCACTCAACTTCATAACGGCAGTTGGACTTGG +
Preference number: 6 (lower is better)
Translates to: HFAGNLCGRHTR*STQLHNGSWTW
Trigger: CCAAGTCCAACTGCCGTTATGAAGTTGAGTGGATCACCGAGTATGCCTGCCACAGAGATTACCTGCAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp TCTCCGCTCAGATGGGCACACAAATGTTACTGTCACTaGAGGGCTGTGACCATTACAGAAGTCTGGCTTTTC +
Preference number: 6 (lower is better)
Translates to: SPLRWAHKCYCH*RAVTITEVWLF
Trigger: GAAAAGCCAGACTTCTGTAATGGTCACAGCCCTGCAGTGACAGTAACATTTGTGTGCCCATCTGAGCGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CTTTGGCACAGATTGATAAAGTACGAGTTTCCTTCATaGACAAAGTCCCAGGACCCCGTGAGGGATGAGAGC +
Preference number: 6 (lower is better)
Translates to: LWHRLIKYEFPS*TKSQDPVRDES
Trigger: GCTCTCATCCCTCACGGGGTCCTGGGACTTTGTGCATGAAGGAAACTCGTACTTTATCAATCTGTGCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GTGTATGAACAAGCCCCAAAACCTGGACTTGACCAGTaGCACTCTTCTTGCAAATGCTGGCTCTTTCAGAGC +
Preference number: 6 (lower is better)
Translates to: VYEQAPKPGLDQ*HSSCKCWLFQS
Trigger: GCTCTGAAAGAGCCAGCATTTGCAAGAAGAGTGCCACTGGTCAAGTCCAGGTTTTGGGGCTTGTTCATACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CTGGGGTCCCGAAGGGAGTCTATGTCTCTACACACGTaGATGAACAGAGACGTGTCAGGATCAGAATCATCT +
Preference number: 6 (lower is better)
Translates to: LGSRRESMSLHT*MNRDVSGSESS
Trigger: AGATGATTCTGATCCTGACACGTCTCTGTTCATCAACGTGTGTAGAGACATAGACTCCCTTCGGGACCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GGAGGAAGAGGTAAACACCACATCCAGATCTCCATCTaGGACGTAGTACTTGGTCATGTCAGAGGTGCCTAC +
Preference number: 6 (lower is better)
Translates to: GGRGKHHIQISI*DVVLGHVRGAY
Trigger: GTAGGCACCTCTGACATGACCAAGTACTACGTCCAAGATGGAGATCTGGATGTGGTGTTTACCTCTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AATAGTAATATCATGCTGCTCACTGCTGAGGGAGCAGCTCTCACTTaGCAGGTAATCTCTGTGGCAGGCATACTCGGTGATCCACTCAAC +
Preference number: 6 (lower is better)
Translates to: NSNIMLLTAEGAALT*QVISVAGILGDPLN
Trigger: GTTGAGTGGATCACCGAGTATGCCTGCCACAGAGATTACCTGCAAAGTGAGAGCTGCTCCCTCAGCAGTGAGCAGCATGATATTACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AGTTCCAAGACTTACCACTTTTCGCTACCTGGCAGGCCCCCGAGTTaGACTGACAAGGATCCATGGATACAGGGCCACAAACATTTATGT +
Preference number: 6 (lower is better)
Translates to: SSKTYHFSLPGRPPS*TDKDPWIQGHKHLC
Trigger: ACATAAATGTTTGTGGCCCTGTATCCATGGATCCTTGTCAGTCAAACTCGGGGGCCTGCCAGGTAGCGAAAAGTGGTAAGTCTTGGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CAGGCAGCCTCCGTGTTCCACAAGAAACTGACCACACATTCCCAGTaGAAAGTGAATATGGGATGGGAGTTCATAAATCCTCGACCACAG +
Preference number: 6 (lower is better)
Translates to: QAASVFHKKLTTHSQ*KVNMGWEFINPRPQ
Trigger: CTGTGGTCGAGGATTTATGAACTCCCATCCCATATTCACTTTCAACTGGGAATGTGTGGTCAGTTTCTTGTGGAACACGGAGGCTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp GTCCCCATTCACGTACAGGATGCTGAGAGACCCATTTCCAGTAGCTaGAGGACTGATCTGCACCACACCCAAGTTAAAACTGTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: VPIHVQDAERPISSS*RTDLHHTQVKTVVF
Trigger: GAAGACAACAGTTTTAACTTGGGTGTGGTGCAGATCAGTCCTCAAGCTACTGGAAATGGGTCTCTCAGCATCCTGTACGTGAATGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AGGGCAAGGATCACCATTCACATAACTCAGAATGACTGCTTCATCTaGGTGCCTGTAATCCAGCTGCATCGATGCAAGGCGCCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: RARITIHITQNDCFI*VPVIQLHRCKAPKR
Trigger: TCTTTTGGGCGCCTTGCATCGATGCAGCTGGATTACAGGCACCAAGATGAAGCAGTCATTCTGAGTTATGTGAATGGTGATCCTTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CTCAAGTCATACTCGTTCCCAGCTGGGTCAGTCACTTaGCAATCCACTAGAGAAGGAGTACAAGCCAATGCA +
Preference number: 6 (lower is better)
Translates to: LKSYSFPAGSVT*QSTREGVQANA
Trigger: TGCATTGGCTTGTACTCCTTCTCTAGTGGATTGTCAAGTGACTGACCCAGCTGGGAACGAGTATGACTTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GCCCTCATGATTTTCATATTTCATCTGGCAAGCAGATaGATATCGATCGCAGCCTGGCACAGGATTCAGAGG +
Preference number: 6 (lower is better)
Translates to: ALMIFIFHLASR*ISIAAWHRIQR
Trigger: CCTCTGAATCCTGTGCCAGGCTGCGATCGATATGCATCTGCTTGCCAGATGAAATATGAAAATCATGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp TCCGTTTTCGAAAGTCAGCTTCTGGCTAAGGAGTCCTaGCACTTTCTGGAATCCCTGTGGTCCTTTCTTTTC +
Preference number: 6 (lower is better)
Translates to: SVFESQLLAKES*HFLESLWSFLF
Trigger: GAAAAGAAAGGACCACAGGGATTCCAGAAAGTGGCAGGACTCCTTAGCCAGAAGCTGACTTTCGAAAACGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTTCAAACTCAAAGTAAGTGTTCCGGATCCCTCGTGTaGAGTCAATGTCCTGATGCAGGAATTTGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: FQTQSKCSGSLV*SQCPDAGIWGL
Trigger: GAGCCCCCAAATTCCTGCATCAGGACATTGACTCCACACGAGGGATCCGGAACACTTACTTTGAGTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TGCTGTGAATCTGAAGGCTGGCAGCCCATAGTGGTGTaGAATTCCAGGAGTGATCTGGCTGAACTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: CCESEGWQPIVV*NSRSDLAELLK
Trigger: TTTGAGAAGTTCAGCCAGATCACTCCTGGAATTCAACACCACTATGGGCTGCCAGCCTTCAGATTCACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ATCGGAGTCTCCCACTCAAACACAAAGTCGCAGTCATaGGTCCTTATCAGCTTAGGAGTTCCCATGCTGACT +
Preference number: 6 (lower is better)
Translates to: IGVSHSNTKSQS*VLISLGVPMLT
Trigger: AGTCAGCATGGGAACTCCTAAGCTGATAAGGACCAATGACTGCGACTTTGTGTTTGAGTGGGAGACTCCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp TGGATTCTGTGCTGTGAATCTGAAGGCTGGCAGCCCATAGTGGTGTaGAATTCCAGGAGTGATCTGGCTGAACTTCTCAAAAGTGAGTCA +
Preference number: 6 (lower is better)
Translates to: WILCCESEGWQPIVV*NSRSDLAELLKSES
Trigger: TGACTCACTTTTGAGAAGTTCAGCCAGATCACTCCTGGAATTCAACACCACTATGGGCTGCCAGCCTTCAGATTCACAGCACAGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp TTGTCACTGCAGGTGAAGCGAATAATGGTTGACCTTCTCCGAATTTaGTCTGGGCACAAGTCACCATCCACATACTGCAGGACAGTCACA +
Preference number: 6 (lower is better)
Translates to: LSLQVKRIMVDLLRI*SGHKSPSTYCRTVT
Trigger: TGTGACTGTCCTGCAGTATGTGGATGGTGACTTGTGCCCAGACAAAATTCGGAGAAGGTCAACCATTATTCGCTTCACCTGCAGTGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CAACCGTTCCACAGGCAGGCATTGCACCACAGATATTaGACACAAAAGTCTTTCCGATGCCTAAGACCACAT +
Preference number: 6 (lower is better)
Translates to: QPFHRQALHHRY*TQKSFRCLRPH
Trigger: ATGTGGTCTTAGGCATCGGAAAGACTTTTGTGTTCAATATCTGTGGTGCAATGCCTGCCTGTGGAACGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AGGGCAAGGATCACCATTCACATAACTCAGAATGACTaGTTCATCTTGGTGCCTGTAATCCAGCTGCATCGA +
Preference number: 6 (lower is better)
Translates to: RARITIHITQND*FILVPVIQLHR
Trigger: TCGATGCAGCTGGATTACAGGCACCAAGATGAAGCAGTCATTCTGAGTTATGTGAATGGTGATCCTTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp CACAGTCTTCGCACAGGTCAATTCGATTACAGACGATaGAGTCTTATTCCCACCACAAGGATAGCCTTTCGA +
Preference number: 6 (lower is better)
Translates to: HSLRTGQFDYRR*SLIPTTRIAFR
Trigger: TCGAAAGGCTATCCTTGTGGTGGGAATAAGACTGCATCGTCTGTAATCGAATTGACCTGTGCGAAGACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp AACACAGGCTCTCCTCTCCCATCCTTACCTGCAGTTTaGTTGCACTCAAAGTTTATGACACTCATCCTCTGG +
Preference number: 6 (lower is better)
Translates to: NTGSPLPSLPAV*LHSKFMTLILW
Trigger: CCAGAGGATGAGTGTCATAAACTTTGAGTGCAACAAAACTGCAGGTAAGGATGGGAGAGGAGAGCCTGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ATCACCATTCACATAACTCAGAATGACTGCTTCATCTaGGTGCCTGTAATCCAGCTGCATCGATGCAAGGCG +
Preference number: 6 (lower is better)
Translates to: ITIHITQNDCFI*VPVIQLHRCKA
Trigger: CGCCTTGCATCGATGCAGCTGGATTACAGGCACCAAGATGAAGCAGTCATTCTGAGTTATGTGAATGGTGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp ACTTGCACTCCATCTTCTTTGGAGGGCAGACAACTTTaGTCTTCCACTCAAATGTCACCTCACACCCACGAT +
Preference number: 6 (lower is better)
Translates to: TCTPSSLEGRQL*SSTQMSPHTHD
Trigger: ATCGTGGGTGTGAGGTGACATTTGAGTGGAAGACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AAGAAGATGGTGGAAGAAACAGACTTGGTCTTATCTTTCCCACACTaGGAGGAAGAGGTAAACACCACATCCAGATCTCCATCTTGGACG +
Preference number: 6 (lower is better)
Translates to: KKMVEETDLVLSFPH*EEEVNTTSRSPSWT
Trigger: CGTCCAAGATGGAGATCTGGATGTGGTGTTTACCTCTTCCTCCAAGTGTGGGAAAGATAAGACCAAGTCTGTTTCTTCCACCATCTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp ACCGGAGTGTCTGGTTCTGGTGTCTTCCTGCTATTTTaGCTTGAGTGGAATCCGCCTTTTTCTCTTGACAAA +
Preference number: 6 (lower is better)
Translates to: TGVSGSGVFLLF*LEWNPPFSLDK
Trigger: TTTGTCAAGAGAAAAAGGCGGATTCCACTCAAGTCAAAATAGCAGGAAGACACCAGAACCAGACACTCCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp AAGATTAAACACAAACCCACTGCTGGGGTCCCTTATTaGGCAAGCCTGGTCTGTTTCTGTGATTGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: KIKHKPTAGVPY*ASLVCFCDCLD
Trigger: ATCCAGACAATCACAGAAACAGACCAGGCTTGCTCAATAAGGGACCCCAGCAGTGGGTTTGTGTTTAATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CTGACCACACATTCCCAGTTGAAAGTGAATATGGGATaGGAGTTCATAAATCCTCGACCACAGACAAGATGG +
Preference number: 6 (lower is better)
Translates to: LTTHSQLKVNMG*EFINPRPQTRW
Trigger: CCATCTTGTCTGTGGTCGAGGATTTATGAACTCCCATCCCATATTCACTTTCAACTGGGAATGTGTGGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp GGAGTCAATGTCCTGATGCAGGAATTTGGGGGCTCCTaGGTAAATGTCATCGTTGCAAATAAAACGGATGAT +
Preference number: 6 (lower is better)
Translates to: GVNVLMQEFGGS*VNVIVANKTDD
Trigger: ATCATCCGTTTTATTTGCAACGATGACATTTACCCAGGAGCCCCCAAATTCCTGCATCAGGACATTGACTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp TTCATTTTCAACAGTCCGTTTTCGAAAGTCAGCTTCTaGCTAAGGAGTCCTGCCACTTTCTGGAATCCCTGT +
Preference number: 6 (lower is better)
Translates to: FIFNSPFSKVSF*LRSPATFWNPC
Trigger: ACAGGGATTCCAGAAAGTGGCAGGACTCCTTAGCCAGAAGCTGACTTTCGAAAACGGACTGTTGAAAATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GAGTGTCTGGTTCTGGTGTCTTCCTGCTATTTTGACTaGAGTGGAATCCGCCTTTTTCTCTTGACAAACAGC +
Preference number: 6 (lower is better)
Translates to: ECLVLVSSCYFD*SGIRLFLLTNS
Trigger: GCTGTTTGTCAAGAGAAAAAGGCGGATTCCACTCAAGTCAAAATAGCAGGAAGACACCAGAACCAGACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CAAATGCTGGCTCTTTCAGAGCAGTCCAGGGGACCTTaGTATACTCTTTGGCACAGATTGATAAAGTACGAG +
Preference number: 6 (lower is better)
Translates to: QMLALSEQSRGP*YTLWHRLIKYE
Trigger: CTCGTACTTTATCAATCTGTGCCAAAGAGTATACAAAGGTCCCCTGGACTGCTCTGAAAGAGCCAGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp GTGGAAGAAACAGACTTGGTCTTATCTTTCCCACACTaGGAGGAAGAGGTAAACACCACATCCAGATCTCCA +
Preference number: 6 (lower is better)
Translates to: VEETDLVLSFPH*EEEVNTTSRSP
Trigger: TGGAGATCTGGATGTGGTGTTTACCTCTTCCTCCAAGTGTGGGAAAGATAAGACCAAGTCTGTTTCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp CTCTTCTTGCAAATGCTGGCTCTTTCAGAGCAGTCCAGGGGACCTTaGTATACTCTTTGGCACAGATTGATAAAGTACGAGTTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: LFLQMLALSEQSRGP*YTLWHRLIKYEFPS
Trigger: TGAAGGAAACTCGTACTTTATCAATCTGTGCCAAAGAGTATACAAAGGTCCCCTGGACTGCTCTGAAAGAGCCAGCATTTGCAAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CATCCTTACCTGCAGTTTTGTTGCACTCAAAGTTTATaGCACTCATCCTCTGGAAGCCAGAGCTACACTCAT +
Preference number: 6 (lower is better)
Translates to: HPYLQFCCTQSL*HSSSGSQSYTH
Trigger: ATGAGTGTAGCTCTGGCTTCCAGAGGATGAGTGTCATAAACTTTGAGTGCAACAAAACTGCAGGTAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp CTCAACTTTATATGCACCATTCTTCTTCGTGAGGAGTaGCAAATCAAAGGAAAACCCTGCCTGGGCATCAAG +
Preference number: 6 (lower is better)
Translates to: LNFICTILLREE*QIKGKPCLGIK
Trigger: CTTGATGCCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAGAATGGTGCATATAAAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp TCTCTGTCTCAACTTTATATGCACCATTCTTCTTCGTaGGGAGTGACAAATCAAAGGAAAACCCTGCCTGGG +
Preference number: 6 (lower is better)
Translates to: SLSQLYMHHSSS*GVTNQRKTLPG
Trigger: CCCAGGCAGGGTTTTCCTTTGATTTGTCACTCCTCACGAAGAAGAATGGTGCATATAAAGTTGAGACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp TCCACTCAAATGTCACCTCACACCCACGATCTTCACTaGACACTTGTGGTCTCCCAATATCTTCACTTTCAT +
Preference number: 6 (lower is better)
Translates to: STQMSPHTHDLH*TLVVSQYLHFH
Trigger: ATGAAAGTGAAGATATTGGGAGACCACAAGTGTTCAGTGAAGATCGTGGGTGTGAGGTGACATTTGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp GTAAATGTCATCGTTGCAAATAAAACGGATGATGAATaGTGTGCCTCTGTCAGAGGGAGAAGAGCCCTTGTA +
Preference number: 6 (lower is better)
Translates to: VNVIVANKTDDE*CASVRGRRALV
Trigger: TACAAGGGCTCTTCTCCCTCTGACAGAGGCACAGCATTCATCATCCGTTTTATTTGCAACGATGACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CTTTCAGAGCAGTCCAGGGGACCTTTGTATACTCTTTaGCACAGATTGATAAAGTACGAGTTTCCTTCATGC +
Preference number: 6 (lower is better)
Translates to: LSEQSRGPLYTL*HRLIKYEFPSC
Trigger: GCATGAAGGAAACTCGTACTTTATCAATCTGTGCCAAAGAGTATACAAAGGTCCCCTGGACTGCTCTGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TTCTCTTCCATCAGAAACATAGGGGGACCCTCCATATaGGGCCAAGGGACTAAGGTCAATAGTAATATCATG +
Preference number: 6 (lower is better)
Translates to: FSSIRNIGGPSI*GQGTKVNSNIM
Trigger: CATGATATTACTATTGACCTTAGTCCCTTGGCCCAATATGGAGGGTCCCCCTATGTTTCTGATGGAAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp AAATGTCACCTCACACCCACGATCTTCACTGAACACTaGTGGTCTCCCAATATCTTCACTTTCATCACACGT +
Preference number: 6 (lower is better)
Translates to: KCHLTPTIFTEH*WSPNIFTFITR
Trigger: ACGTGTGATGAAAGTGAAGATATTGGGAGACCACAAGTGTTCAGTGAAGATCGTGGGTGTGAGGTGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp CAGTCCAGGGGACCTTTGTATACTCTTTGGCACAGATaGATAAAGTACGAGTTTCCTTCATGCACAAAGTCC +
Preference number: 6 (lower is better)
Translates to: QSRGPLYTLWHR*IKYEFPSCTKS
Trigger: GGACTTTGTGCATGAAGGAAACTCGTACTTTATCAATCTGTGCCAAAGAGTATACAAAGGTCCCCTGGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp AGTCATAGGTCTTATGCTTCTGAACAAACTTGCACTCCATCTTCTTaGGAGGGCAGACAACTTTTGTCTTCCACTCAAATGTCACCTCAC +
Preference number: 6 (lower is better)
Translates to: SHRSYASEQTCTPSS*EGRQLLSSTQMSPH
Trigger: GTGAGGTGACATTTGAGTGGAAGACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCAAGTTTGTTCAGAAGCATAAGACCTATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GCCCACAGCTGGAAATACCCACATTTCCACAGACGTTaGTCTTATAAACTGCATTGTTTTTGGAGTCAACAG +
Preference number: 6 (lower is better)
Translates to: AHSWKYPHFHRR*SYKLHCFWSQQ
Trigger: CTGTTGACTCCAAAAACAATGCAGTTTATAAGATCAACGTCTGTGGAAATGTGGGTATTTCCAGCTGTGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TCCGTGTTCCACAAGAAACTGACCACACATTCCCAGTaGAAAGTGAATATGGGATGGGAGTTCATAAATCCT +
Preference number: 6 (lower is better)
Translates to: SVFHKKLTTHSQ*KVNMGWEFINP
Trigger: AGGATTTATGAACTCCCATCCCATATTCACTTTCAACTGGGAATGTGTGGTCAGTTTCTTGTGGAACACGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 72 bp TCTTTCAGAGCAGTCCAGGGGACCTTTGTATACTCTTaGGCACAGATTGATAAAGTACGAGTTTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: SFRAVQGTFVYS*AQIDKVRVSFM
Trigger: CATGAAGGAAACTCGTACTTTATCAATCTGTGCCAAAGAGTATACAAAGGTCCCCTGGACTGCTCTGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CAA 90 bp GATCTTGCAGCTCTTAGCACTGGAGCACTTTCTAGATCACCTGGTTaGCACACAAGTGTGATGTTAGTTGATATTTTCTTATCACTGCCA +
Preference number: 6 (lower is better)
Translates to: DLAALSTGALSRSPG*HTSVMLVDIFLSLP
Trigger: TGGCAGTGATAAGAAAATATCAACTAACATCACACTTGTGTGCAAACCAGGTGATCTAGAAAGTGCTCCAGTGCTAAGAGCTGCAAGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS CCA 72 bp CTTATGCTTCTGAACAAACTTGCACTCCATCTTCTTTaGAGGGCAGACAACTTTTGTCTTCCACTCAAATGT +
Preference number: 6 (lower is better)
Translates to: LMLLNKLALHLL*RADNFCLPLKC
Trigger: ACATTTGAGTGGAAGACAAAAGTTGTCTGCCCTCCAAAGAAGATGGAGTGCAAGTTTGTTCAGAAGCATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS TCA 72 bp GATCAGAATCATCTACCAGATAGCCACCATTTAGCTTaGTCAGTGGGTTTAAATCATGCTTCTGTAACTTGT +
Preference number: 6 (lower is better)
Translates to: DQNHLPDSHHLA*SVGLNHASVTC
Trigger: ACAAGTTACAGAAGCATGATTTAAACCCACTGATCAAGCTAAATGGTGGCTATCTGGTAGATGATTCTGATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14
CDS GCA 72 bp AATACCCACATTTCCACAGACGTTGATCTTATAAACTaGATTGTTTTTGGAGTCAACAGCTTCCCATGTGTA +
Preference number: 6 (lower is better)
Translates to: NTHISTDVDLIN*IVFGVNSFPCV
Trigger: TACACATGGGAAGCTGTTGACTCCAAAAACAATGCAGTTTATAAGATCAACGTCTGTGGAAATGTGGGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024599.14