Pregenerated sensors for IGF2BP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029814Ensembl transcript IDs: ENSMUST00000031838.9
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGCCCTGTACACTAGCTGTCCTTTACCCTAGCTGTCCTGTACACTaGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTACCGTCAACAACC | + |
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Preference number: 1 (lower is better) Translates to: EPCTLAVLYPSCPVH*PSQPLPAWSVPSTT Trigger: GGTTGTTGACGGTACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAGGACAGCTAGTGTACAGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR GCA 90 bp | CTGTCCTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTaGCTGCTTGGTCAGTACCGTCAACAACCTTCCCAGATAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: LSFTLAVLYTGRPSP*LLGQYRQQPSQIGT Trigger: TGTTCCTATCTGGGAAGGTTGTTGACGGTACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR GCA 90 bp | CTTAGGCTCGAGACAGTGCCAGGCACAAGGAAATGGAGATTTTGTTaGCCTTCGGCCCTGTCATACCACCTGACTCCCCCTGGTCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: LRLETVPGTRKWRFC*PSALSYHLTPPGLH Trigger: GTGAAGACCAGGGGGAGTCAGGTGGTATGACAGGGCCGAAGGGCAACAAAATCTCCATTTCCTTGTGCCTGGCACTGTCTCGAGCCTAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR TCA 90 bp | ATCACCCGCACCTACAAGTATCCATACAGGGCTTTGCCACTAAGTTaGGGAAGGGCAAAGGGAAGTCCGATGTTTCCACAGTCTGAATTC | + |
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Preference number: 1 (lower is better) Translates to: ITRTYKYPYRALPLS*GRAKGSPMFPQSEF Trigger: GAATTCAGACTGTGGAAACATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATACTTGTAGGTGCGGGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR TCA 90 bp | ATTATGAACAAAGCAACAAGAACAACTCAGAAAGCAGCATGGCCTTaGGGATCACCCGCACCTACAAGTATCCATACAGGGCTTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: IMNKATRTTQKAAWP*GSPAPTSIHTGLCH Trigger: GTGGCAAAGCCCTGTATGGATACTTGTAGGTGCGGGTGATCCTCAAGGCCATGCTGCTTTCTGAGTTGTTCTTGTTGCTTTGTTCATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR GCA 90 bp | CCTACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTaGTACATTTCATGGAAGACTTTTGGTGGACTTAATTCTTCCACT | + |
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Preference number: 1 (lower is better) Translates to: PTLTRWQVMQGRQKL*YISWKTFGGLNSST Trigger: AGTGGAAGAATTAAGTCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CCA 90 bp | TACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTATCGTGCACGTGGTTCTaGATGGGTCAGCACCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: YPSCPVHWPSQPLPAWSVSCTWF*MGQHPS Trigger: AGACGGGTGCTGACCCATCCAGAACCACGTGCACGA...TACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATGGCCGTCCCAGCCCCTaGCTGCTTGGTCAGTACCGT | + |
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Preference number: 2 (lower is better) Translates to: PYLDSLAGNAGQTETLLHGRPSP*LLGQYR Trigger: ACGGTACTGACCAAGCAGGCAGGGGCTGGGACGGCC...ATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR GCA 90 bp | CTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAATATCACAAGGGAAGTaGAGAGTTCTCTTTCCTTAC | + |
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Preference number: 2 (lower is better) Translates to: LYPSCPVHWPSQPLPAWSISQGK*RVLFPY Trigger: GTAAGGAAAGAGAACTCTGCACTTCCCTTGTGATAT...TGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 90 bp | TTTCCACAGTCTGAATTCCCAAAACCGTTTGCTGGATCCCCTACCTaGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: FPQSEFPKPFAGSPT*TRWQVMQGRQKLCY Trigger: GTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGGGATCCAGCAAACGGTTTTGGGAATTCAGACTGTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 90 bp | CATTATGAACAAAGCAACAAGAACAACTCAGAAAGCAGCATGGCCTaGAGGATCACCCGCACCTACAAGTATCCATACAGGGCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: HYEQSNKNNSESSMA*RITRTYKYPYRALP Trigger: TGGCAAAGCCCTGTATGGATACTTGTAGGTGCGGGTGATCCTCAAGGCCATGCTGCTTTCTGAGTTGTTCTTGTTGCTTTGTTCATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR GCA 90 bp | GTAATGCAGGGCAGACAGAAACTCTGCTACATTTCATGGAAGACTTTTGGTGGATTAGGCTCGAGACAGTaGCAGGCACAAGGAAATGGA | + |
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Preference number: 2 (lower is better) Translates to: VMQGRQKLCYISWKTFGGLGSRQ*QAQGNG Trigger: TCCATTTCCTTGTGCCTGGCACTGTCTCGAGCCTAA...TCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTTCTCAGCACCCGTCTGTTaGTTAAGCAAATCTGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: YLDSLAGNAGQTETLLHFSAPVC*LSKSVF Trigger: AAAGACAGATTTGCTTAACCAACAGACGGGTGCTGA...GAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR GCA 90 bp | TACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTTCAAAGCACAAAGCATTTaGAAATTCCCACACATAGCT | + |
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Preference number: 2 (lower is better) Translates to: YLDSLAGNAGQTETLLHFKAQSI*KFPHIA Trigger: AGCTATGTGTGGGAATTTGCAAATGCTTTGTGCTTT...GAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR TCA 90 bp | GTAATGCAGGGCAGACAGAAACTCTGCTACATTTCATGGAAGACTTTTGGTGGAACGTTTGTTATACTTTaGTATCACAAGGGAAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VMQGRQKLCYISWKTFGGTFVIL*YHKGSA Trigger: TGCACTTCCCTTGTGATATCAAAGTATAACAAACGT...TCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR TCA 90 bp | CATGAATTTCTTCCTTTTCGTGGTGACAGTCAAAGCACAAAGCATTTGCAAATTAATGTTGTGTTCCTCTaGCAATTCTACTTTGATCCA | + |
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Preference number: 2 (lower is better) Translates to: HEFLPFRGDSQSTKHLQINVVFL*QFYFDP Trigger: TGGATCAAAGTAGAATTGTCAGAGGAACACAACATT...AATTTGCAAATGCTTTGTGCTTTGACTGTCACCACGAAAAGGAAGAAATTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR GCA 72 bp | ACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTaGCTGCTTGGTCAGTACCGTCAACAACCTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TLAVLYTGRPSP*LLGQYRQQPSQ Trigger: CTGGGAAGGTTGTTGACGGTACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CCA 72 bp | TGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTaGTCAGTACCGTCAACAACCTTCCCAGATAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: CPVHWPSQPLPA*SVPSTTFPDRN Trigger: GTTCCTATCTGGGAAGGTTGTTGACGGTACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CCA 72 bp | TTGCCCTTCGGCCCTGTCATACCACCTGACTCCCCCTaGTCTTCACAAAGCAATCCTTTCCATGTCTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: LPFGPVIPPDSP*SSQSNPFHVCS Trigger: TGAGCAGACATGGAAAGGATTGCTTTGTGAAGACCAGGGGGAGTCAGGTGGTATGACAGGGCCGAAGGGCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CCA 72 bp | CCAAAACCGTTTGCTGGATCCCCTACCTTGACTCGCTaGCAGGTAATGCAGGGCAGACAGAAACTCTGCTAC | + |
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Preference number: 3 (lower is better) Translates to: PKPFAGSPTLTR*QVMQGRQKLCY Trigger: GTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGGGATCCAGCAAACGGTTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CAA 90 bp | CCCTACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATGTCAGCACCCGTCTGTaGGTTAAGCAAATCTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: PYLDSLAGNAGQTETLLHVSTRL*VKQICL Trigger: AAGACAGATTTGCTTAACCAACAGACGGGTGCTGAC...ATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CAA 90 bp | GTATCCATACAGGGCTTTGCCACTAAGTTGAGGAAGGGCAAAGGGAAGTCCGATATGGCATGGCTGCTCTaGAGAATAGGCACTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: VSIQGFATKLRKGKGKSDMAWLL*RIGTAP Trigger: AGGAGCAGTGCCTATTCTCAAGAGCAGCCATGCCAT...ATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR TCA 72 bp | ACCTACAAGTATCCATACAGGGCTTTGCCACTAAGTTaGGGAAGGGCAAAGGGAAGTCCGATGTTTCCACAG | + |
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Preference number: 3 (lower is better) Translates to: TYKYPYRALPLS*GRAKGSPMFPQ Trigger: CTGTGGAAACATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATACTTGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CAA 90 bp | TACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTTCCAAAGCACAAAGCATTaGCAAATTCCCACACATAGC | + |
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Preference number: 3 (lower is better) Translates to: YLDSLAGNAGQTETLLHFQSTKH*QIPTHS Trigger: GCTATGTGTGGGAATTTGCAAATGCTTTGTGCTTTG...GAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR GCA 72 bp | ACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTaGTACATTTCATGGAAGACTTTTGGTGGACTTAAT | + |
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Preference number: 3 (lower is better) Translates to: TRWQVMQGRQKL*YISWKTFGGLN Trigger: ATTAAGTCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR-3UTR CAA 90 bp | CATGAATTTCTTCCTTTTCGTGGTGACAGTCAAAGCACAAAGCATTTGCAAATTTCTAATGGCTTAATGTaGTGTTCCTCTGACAATTCT | + |
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Preference number: 3 (lower is better) Translates to: HEFLPFRGDSQSTKHLQISNGLM*CSSDNS Trigger: AGAATTGTCAGAGGAACACAACATTAAGCCATTAGA...AATTTGCAAATGCTTTGTGCTTTGACTGTCACCACGAAAAGGAAGAAATTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR TCA 90 bp | CTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGCGCCTCGATGGCCTTaGGGGCCCAGCCCTCGTCCG | + |
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Preference number: 4 (lower is better) Translates to: LYPSCPVHWPSQPLPAWSAPRWP*GPSPRP Trigger: CGGACGAGGGCTGGGCCCTCAAGGCCATCGAGGCGC...TGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | CCCTACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTCCGCGGGGCCGGCGTaGTCGCTGAGGTTCCCGATG | + |
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Preference number: 4 (lower is better) Translates to: PYLDSLAGNAGQTETLLHSAGPA*SLRFPM Trigger: CATCGGGAACCTCAGCGACCACGCCGGCCCCGCGGA...ATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR TCA 90 bp | GTAATGCAGGGCAGACAGAAACTCTGCTACATTTCATGGAAGACTTTTGGTGGAAGACGCCTGCCTGGATaGGCCCCGCTGCCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VMQGRQKLCYISWKTFGGRRLPG*APLPWP Trigger: GGGCCAGGGCAGCGGGGCTCATCCAGGCAGGCGTCT...TCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | TACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTACGTTTAGGGACCGAGTaGTCAACTTCCATCGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: YPSCPVHWPSQPLPAWSVRLGTE*STSIGF Trigger: GAAACCGATGGAAGTTGAGCACTCGGTCCCTAAACG...TACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | TACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTAAGTTTACGAATCCTCTaGCGTTTAGGGACCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: YPSCPVHWPSQPLPAWSVSLRIL*RLGTEC Trigger: GCACTCGGTCCCTAAACGGCAGAGGATTCGTAAACT...TACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR TCA 90 bp | CTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCACACAGTCTCCGTCTCTaGTTGCTCAAATTGTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LYPSCPVHWPSQPLPAWSHSLRL*LLKLWV Trigger: TACCCACAATTTGAGCAATCAGAGACGGAGACTGTG...TGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 72 bp | GCTCGAGACAGTGCCAGGCACAAGGAAATGGAGATTTaGTTGCCCTTCGGCCCTGTCATACCACCTGACTCC | + |
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Preference number: 4 (lower is better) Translates to: ARDSARHKEMEI*LPFGPVIPPDS Trigger: GGAGTCAGGTGGTATGACAGGGCCGAAGGGCAACAAAATCTCCATTTCCTTGTGCCTGGCACTGTCTCGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | CCCTACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATGAATCCGTGTTCACTTaGTCACAGCTCTCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: PYLDSLAGNAGQTETLLHESVFT*SQLSTT Trigger: AGTGGTGGAGAGCTGTGAGCAAGTGAACACGGATTC...ATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | CTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCATACAGCGTCAGTTCCTaGAATGGAGATATTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: LYPSCPVHWPSQPLPAWSYSVSS*NGDIVI Trigger: AATCACAATATCTCCATTGCAGGAACTGACGCTGTA...TGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | TACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTTCGGCGAGGGATTTTGCTaGGCAGCAGTTTCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: YLDSLAGNAGQTETLLHFGEGFC*AAVSSG Trigger: CCCAGATGAAACTGCTGCCCAGCAAAATCCCTCGCC...GAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | CTTTACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTATTCTCCTTACGATaGACATCGATTTTAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LYPSCPVHWPSQPLPAWSVFSLR*TSILDW Trigger: CCAGTCTAAAATCGATGTCCATCGTAAGGAGAATAC...TGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | GTATCCATACAGGGCTTTGCCACTAAGTTGAGGAAGGGCAAAGGGAAGTCCGATTTTCCTCCTCCGCCTTaGCACACGTCTCAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: VSIQGFATKLRKGKGKSDFPPPP*HTSQHC Trigger: GCAGTGTTGAGACGTGTGCCAAGGCGGAGGAGGAAA...ATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR TCA 90 bp | TACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTAGGGATTAAATGTGCTTaGAGATTCATGGAAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: YPSCPVHWPSQPLPAWSVGIKCA*RFMEAI Trigger: TATTGCTTCCATGAATCTTCAAGCACATTTAATCCC...TACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 72 bp | TCTGAATTCCCAAAACCGTTTGCTGGATCCCCTACCTaGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SEFPKPFAGSPT*TRWQVMQGRQK Trigger: TTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTAGGGGATCCAGCAAACGGTTTTGGGAATTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 72 bp | CACCTACAAGTATCCATACAGGGCTTTGCCACTAAGTaGAGGAAGGGCAAAGGGAAGTCCGATGTTTCCACA | + |
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Preference number: 4 (lower is better) Translates to: HLQVSIQGFATK*RKGKGKSDVST Trigger: TGTGGAAACATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATACTTGTAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 72 bp | CAAAGCAACAAGAACAACTCAGAAAGCAGCATGGCCTaGAGGATCACCCGCACCTACAAGTATCCATACAGG | + |
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Preference number: 4 (lower is better) Translates to: QSNKNNSESSMA*RITRTYKYPYR Trigger: CCTGTATGGATACTTGTAGGTGCGGGTGATCCTCAAGGCCATGCTGCTTTCTGAGTTGTTCTTGTTGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | GTAATGCAGGGCAGACAGAAACTCTGCTACATTTCATGGAAGACTTTTGGTGGATGTGGCGAGGGATTTTaGTGGGCAGCAGTTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: VMQGRQKLCYISWKTFGGCGEGF*WAAVSS Trigger: AGATGAAACTGCTGCCCAGCAAAATCCCTCGCCACA...TCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | TACCTTGACTCGCTGGCAGGTAATGCAGGGCAGACAGAAACTCTGCTACATTTCACATCGATTTTAGACTaGGTCTGCTTTGTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: YLDSLAGNAGQTETLLHFTSILD*VCFVML Trigger: CAACATCACAAAGCAGACCCAGTCTAAAATCGATGT...GAAATGTAGCAGAGTTTCTGTCTGCCCTGCATTACCTGCCAGCGAGTCAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR GCA 90 bp | CATGAATTTCTTCCTTTTCGTGGTGACAGTCAAAGCACAAAGCATTTGCAAATTTTGATGTGTTGGCCCTaGTTGCCAATGATGGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HEFLPFRGDSQSTKHLQILMCWP*LPMMAP Trigger: TGGCGCCATCATTGGCAAGCAGGGCCAACACATCAA...AATTTGCAAATGCTTTGTGCTTTGACTGTCACCACGAAAAGGAAGAAATTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| 3UTR CAA 72 bp | GCAGACAGAAACTCTGCTACATTTCATGGAAGACTTTaGGTGGACTTAATTCTTCCACTGTTTAAAACATCT | + |
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Preference number: 4 (lower is better) Translates to: ADRNSATFHGRL*VDLILPLFKTS Trigger: AGATGTTTTAAACAGTGGAAGAATTAAGTCCACCAAAAGTCTTCCATGAAATGTAGCAGAGTTTCTGTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CCA 90 bp | CATGAATTTCTTCCTTTTCGTGGTGACAGTCAAAGCACAAAGCATTTGCAAATTCGTCAGTTCCTGCAATaGAGATATTGTGATTTTAGT | + |
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Preference number: 4 (lower is better) Translates to: HEFLPFRGDSQSTKHLQIRQFLQ*RYCDFS Trigger: ACTAAAATCACAATATCTCCATTGCAGGAACTGACG...AATTTGCAAATGCTTTGTGCTTTGACTGTCACCACGAAAAGGAAGAAATTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CAA 90 bp | TACCCTAGCTGTCCTGTACACTGGCCGTCCCAGCCCCTGCCTGCTTGGTCAGTACTGTGGCGAGGGATTTaGCTGGGCAGCAGTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: YPSCPVHWPSQPLPAWSVLWRGI*LGSSFI Trigger: GATGAAACTGCTGCCCAGCAAAATCCCTCGCCACAG...TACTGACCAAGCAGGCAGGGGCTGGGACGGCCAGTGTACAGGACAGCTAGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CAA 90 bp | GTATCCATACAGGGCTTTGCCACTAAGTTGAGGAAGGGCAAAGGGAAGTCCGATATTTCCTCCTCCGCCTaGGCACACGTCTCAACACTG | + |
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Preference number: 5 (lower is better) Translates to: VSIQGFATKLRKGKGKSDISSSA*AHVSTL Trigger: CAGTGTTGAGACGTGTGCCAAGGCGGAGGAGGAAAT...ATCGGACTTCCCTTTGCCCTTCCTCAACTTAGTGGCAAAGCCCTGTATGGATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS-3UTR CAA 90 bp | CATGAATTTCTTCCTTTTCGTGGTGACAGTCAAAGCACAAAGCATTTGCAAATTCGAATCCGTGTTCACTaGCTCACAGCTCTCCACCAC | + |
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Preference number: 5 (lower is better) Translates to: HEFLPFRGDSQSTKHLQIRIRVH*LTALHH Trigger: GTGGTGGAGAGCTGTGAGCAAGTGAACACGGATTCG...AATTTGCAAATGCTTTGTGCTTTGACTGTCACCACGAAAAGGAAGAAATTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS CAA 90 bp | CCGCTGCCCTGGCCCCCGGCGCCCCCGGAGCTGTGGCGAGGGATTTaGCTGGGCAGCAGTTTCATCTGGGATGTAGGCAACCTTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: PLPWPPAPPELWRGI*LGSSFIWDVGNLQG Trigger: ACCTTGAAGGTTGCCTACATCCCAGATGAAACTGCTGCCCAGCAAAATCCCTCGCCACAGCTCCGGGGGCGCCGGGGGCCAGGGCAGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS CAA 72 bp | TGGCCCCCGGCGCCCCCGGAGCTGTGGCGAGGGATTTaGCTGGGCAGCAGTTTCATCTGGGATGTAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: WPPAPPELWRGI*LGSSFIWDVGN Trigger: GTTGCCTACATCCCAGATGAAACTGCTGCCCAGCAAAATCCCTCGCCACAGCTCCGGGGGCGCCGGGGGCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS CCA 72 bp | ATGGACTTCTCCGCGGCCCCTGTATTCTCCTTACGATaGACATCGATTTTAGACTGGGTCTGCTTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: MDFSAAPVFSLR*TSILDWVCFVM Trigger: CATCACAAAGCAGACCCAGTCTAAAATCGATGTCCATCGTAAGGAGAATACAGGGGCCGCGGAGAAGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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| CDS CAA 72 bp | GACTCCCTGATCTTCTTCATTATTTCCTCCTCCGCCTaGGCACACGTCTCAACACTGCCTTTCACTGTAATG | + |
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Preference number: 6 (lower is better) Translates to: DSLIFFIISSSA*AHVSTLPFTVM Trigger: CATTACAGTGAAAGGCAGTGTTGAGACGTGTGCCAAGGCGGAGGAGGAAATAATGAAGAAGATCAGGGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031838.9 |
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