Pregenerated sensors for IGF2BP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033581Ensembl transcript IDs: ENSMUST00000100052.11, ENSMUST00000115379.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGCCTTCCCTGTGCCCTCCTGGATCCCAGGATGTGTAGAGGTCTaGAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: LAFPVPSWIPGCVEV*RPWLLCRLRTPRDA Trigger: AGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCTCTACACATCCTGGGATCCAGGAGGGCACAGGGAAGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 90 bp | CCTGTGCCCTCCTGGATCCCAGGATGTGTAGAGGTCTGCAGGCCCTaGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: PVPSWIPGCVEVCRP*LLCRLRTPRDALWF Trigger: AAACCAAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCTCTACACATCCTGGGATCCAGGAGGGCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 90 bp | CATCGCAGTCTGGTAGTGTCATGGTTTCTTCACATAACCAGGATGTaGTCATCCTTCAGCGCAAAAGCCCTCACGGCACGTACCCTATTG | + |
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Preference number: 1 (lower is better) Translates to: HRSLVVSWFLHITRM*SSFSAKALTARTLL Trigger: CAATAGGGTACGTGCCGTGAGGGCTTTTGCGCTGAAGGATGACCACATCCTGGTTATGTGAAGAAACCATGACACTACCAGACTGCGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100052.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTTCTGCAGGCCCTGGCTaGTCTGCAGACTGCGCACTC | + |
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Preference number: 2 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPSAGPG*SADCAL Trigger: GAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGA...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTCTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTTTGCTCCCGATCTGCTaGCTGTTTGGTCTCATCTGT | + |
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Preference number: 2 (lower is better) Translates to: RSAGPGCSADCALLGMLFLLPIC*LFGLIC Trigger: ACAGATGAGACCAAACAGCCAGCAGATCGGGAGCAA...AAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTTGGATGGGCAGTGGATGGCTGTTATGCCTGCAGAAGCCAGGGGAAGCTGCCAAGCGGTGTTTCTaGACAACCTGGCCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LSWMGSGWLLCLQKPGEAAKRCF*TTWPSL Trigger: CAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGC...AGCTTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACTGCCCATCCAACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCAAAGTTCCTTTCTATACCAGTGGACCTCACCCAATACTTTATTCTTGGAAGAGGTCTGCAGGCCCTaGCTGCTCTGCAGACTGCGC | + |
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Preference number: 2 (lower is better) Translates to: AQSSFLYQWTSPNTLFLEEVCRP*LLCRLR Trigger: GCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCTC...TTCCAAGAATAAAGTATTGGGTGAGGTCCACTGGTATAGAAAGGAACTTTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | AAACCGGCATCGCAGTCTGGTAGTGTCATGGTTTCTTCACATAACCAGGATGTGTGTTTCTGGACAACCTaGCCTTCCCTGTGCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KPASQSGSVMVSSHNQDVCFWTT*PSLCPP Trigger: AGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACA...CACATCCTGGTTATGTGAAGAAACCATGACACTACCAGACTGCGATGCCGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100052.11 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTGAAGCCAGGGGAAGCTaGGGGCAGGCCAAGCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFEARGS*GQAKRC Trigger: ACACCGCTTGGCCTGCCCCCAGCTTCCCCTGGCTTC...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTGGATGTGTAGAGGTCTaGAGGCCCTGGCTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFGCVEV*RPWLLC Trigger: GCAGAGCAGCCAGGGCCTGCAGACCTCTACACATCC...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR GCA 90 bp | ATACATGTACAGAGACAACTTTCCACAACAAAGAAACGGCTAGGAATTTTGCTTGGATGTGTAGAGGTCTaGAGGCCCTGGCTGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: IHVQRQLSTTKKRLGILLGCVEV*RPWLLC Trigger: GCAGAGCAGCCAGGGCCTGCAGACCTCTACACATCC...AAGCAAAATTCCTAGCCGTTTCTTTGTTGTGGAAAGTTGTCTCTGTACATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTGCCAAGCGGTGTTTCTaGACAACCTGGCCTTCCCTG | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFAKRCF*TTWPSL Trigger: CAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGC...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTTTCCCTGTGCCCTCCTaGATCCCAGGATGTGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFFPVPS*IPGCVE Trigger: CTCTACACATCCTGGGATCCAGGAGGGCACAGGGAA...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTTGTTTCTGGACAACCTaGCCTTCCCTGTGCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFCFWTT*PSLCPP Trigger: AGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACA...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTAGTGGATGGCTGTTATaGCTGCAGAAGCCAGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFSGWLL*LQKPGE Trigger: TTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACT...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCGGCATCGCAGTCTGGTAGTGTCATGGTTTCTTCACATAACCAGGATGTGCTAGGAATTTTGCTTTaGTTTGAGCATGTTCACCTA | + |
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Preference number: 2 (lower is better) Translates to: KPASQSGSVMVSSHNQDVLGILL*FEHVHL Trigger: TAGGTGAACATGCTCAAAGCAAAGCAAAATTCCTAG...CACATCCTGGTTATGTGAAGAAACCATGACACTACCAGACTGCGATGCCGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100052.11 |
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| 3UTR-3UTR TCA 90 bp | ATACATGTACAGAGACAACTTTCCACAACAAAGAAACGGCTAGGAATTTTGCTTGAACTGAGGAGAATCTaGGTTGGATGGGCAGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: IHVQRQLSTTKKRLGILLELRRI*VGWAVD Trigger: ATCCACTGCCCATCCAACTCAGATTCTCCTCAGTTC...AAGCAAAATTCCTAGCCGTTTCTTTGTTGTGGAAAGTTGTCTCTGTACATGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTTGTGAAACTGAGCAATaGGTGTGTGGGAGAAACAGG | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFCETEQ*VCGRNR Trigger: CCTGTTTCTCCCACACACCCATTGCTCAGTTTCACA...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTATACCAAGATGGAGAGAGAGTCCATTCTTTCTTTGTGGGATTTTTCTTTGGCTGGTTTATTTGCTaGGATCCTGCTTTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVYQDGERVHSFFVGFFFGWFIC*DPAFLF Trigger: GAAGAGGAAAGCAGGATCCCAGCAAATAAACCAGCC...AAAGAAAAATCCCACAAAGAAAGAATGGACTCTCTCTCCATCTTGGTATACAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 72 bp | GCCAGGGGAAGCTGGGGGCAGGCCAAGCGGTGTTTCTaGACAACCTGGCCTTCCCTGTGCCCTCCTGGATCC | + |
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Preference number: 3 (lower is better) Translates to: ARGSWGQAKRCF*TTWPSLCPPGS Trigger: GGATCCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCTTCCCCTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGGGCTACATTCATCGGTaGCTTGCTGGTGCTGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWGYIHR*LAGAVG Trigger: TCCCACAGCACCAGCAAGCAACCGATGAATGTAGCC...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 72 bp | TCCTGGATCCCAGGATGTGTAGAGGTCTGCAGGCCCTaGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: SWIPGCVEVCRP*LLCRLRTPRDA Trigger: AGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCTCTACACATCCTGGGATCCAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 72 bp | GTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTaGATCCCAGGATGTGTAGAGGTCTGCAGGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: VFLDNLAFPVPS*IPGCVEVCRPW Trigger: CCAGGGCCTGCAGACCTCTACACATCCTGGGATCCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR TCA 72 bp | TGTGAAACTGAGCAATGGGTGTGTGGGAGAAACAGGTaGCCAGGGCCTAGGGCCCCTCCTCAGGGACGGTAT | + |
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Preference number: 3 (lower is better) Translates to: CETEQWVCGRNR*PGPRAPPQGRY Trigger: ATACCGTCCCTGAGGAGGGGCCCTAGGCCCTGGTCACCTGTTTCTCCCACACACCCATTGCTCAGTTTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 72 bp | GGAACTGAGGAGAATCTGAGTTGGATGGGCAGTGGATaGCTGTTATGCCTGCAGAAGCCAGGGGAAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: GTEENLSWMGSG*LLCLQKPGEAG Trigger: CCCAGCTTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACTGCCCATCCAACTCAGATTCTCCTCAGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| 3UTR CCA 72 bp | CTGGTAGTGTCATGGTTTCTTCACATAACCAGGATGTaGTCATCCTTCAGCGCAAAAGCCCTCACGGCACGT | + |
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Preference number: 3 (lower is better) Translates to: LVVSWFLHITRM*SSFSAKALTAR Trigger: ACGTGCCGTGAGGGCTTTTGCGCTGAAGGATGACCACATCCTGGTTATGTGAAGAAACCATGACACTACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100052.11 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGACGGGGCCCTGCTGGTaGAGGAAGCACAGACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWTGPCW*RKHRQS Trigger: GGACTGTCTGTGCTTCCTCCACCAGCAGGGCCCCGT...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGTCCACGGGGCCCTGCTaGTGGAGGAAGCACAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWSTGPC*WRKHRQ Trigger: CTGTCTGTGCTTCCTCCACCAGCAGGGCCCCGTGGA...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTTCCACGGGGCCCTGCTaGTGGAGGAAGCACAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPSTGPC*WRKHRQ Trigger: CTGTCTGTGCTTCCTCCACCAGCAGGGCCCCGTGGA...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR TCA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTAGATGCCAAGTGCACTaGGGTTTAGCCCTGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPRCQVH*GLALGS Trigger: TGATCCCAGGGCTAAACCTCAGTGCACTTGGCATCT...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR TCA 90 bp | AGGTCTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTAGATGCCAAGTGCACTaGGGTTTAGCCCTGGGATCA | + |
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Preference number: 4 (lower is better) Translates to: RSAGPGCSADCALLGMLFRCQVH*GLALGS Trigger: TGATCCCAGGGCTAAACCTCAGTGCACTTGGCATCT...AAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTTTCAGATGTCCCTTCTaGGGTAGCATGGATTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPFRCPF*GSMDCD Trigger: GTCACAATCCATGCTACCCCAGAAGGGACATCTGAA...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | CTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTGGTTGTAGGAGTGATGATGTaGGAATGGGCCGAAATGGTG | + |
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Preference number: 4 (lower is better) Translates to: LQALAALQTAHSSGCSLVVGVMM*EWAEMV Trigger: CACCATTTCGGCCCATTCCCACATCATCACTCCTAC...AACCAAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | CTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTGGTTATCTGGACCTTCTGCTaGAGCAATCTTGATGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LQALAALQTAHSSGCSLVIWTFC*SNLDGG Trigger: GCCTCCATCAAGATTGCTCCAGCAGAAGGTCCAGAT...AACCAAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGTCTCGGGGTTATAAATaGTCAAATCCTGCAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWSRGYK*SNPARM Trigger: CATCCTTGCAGGATTTGAGCATTTATAACCCCGAGA...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | AGGTCTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTTTCAGATGTCCCTTCTaGGGTAGCATGGATTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: RSAGPGCSADCALLGMLFFRCPF*GSMDCD Trigger: GTCACAATCCATGCTACCCCAGAAGGGACATCTGAA...AAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR GCA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGTTTTCTTCAGGTTTCTaGCTTCTTTGCCAATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWFSSGF*LLCQSV Trigger: GACTGATTGGCAAAGAAGGCAGAAACCTGAAGAAAA...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGATGAGATGGTTATCTTaGTCCCTGTCTCATGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWMRWLS*SLSHVL Trigger: TAGAACATGAGACAGGGACCAAGATAACCATCTCAT...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTATGAGATGGTTATCTTaGTCCCTGTCTCATGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPMRWLS*SLSHVL Trigger: TAGAACATGAGACAGGGACCAAGATAACCATCTCAT...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTTGGATGGGCAGTGGATGGCTGTTATGCCTGCAGAAGCCAGGGGAAGCTATCTGGACCTTCTGCTaGAGCAATCTTGATGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: LSWMGSGWLLCLQKPGEAIWTFC*SNLDGG Trigger: GCCTCCATCAAGATTGCTCCAGCAGAAGGTCCAGAT...AGCTTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACTGCCCATCCAACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | CTGAGTTGGATGGGCAGTGGATGGCTGTTATGCCTGCAGAAGCCAGGGGAAGCTCCTCTCACTGACATCTaGACCTTCTGCTGGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LSWMGSGWLLCLQKPGEAPLTDI*TFCWSN Trigger: ATTGCTCCAGCAGAAGGTCCAGATGTCAGTGAGAGG...AGCTTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACTGCCCATCCAACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR GCA 90 bp | CTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTGGTTTTTTCTTCAGGTTTCTaGCTTCTTTGCCAATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LQALAALQTAHSSGCSLVFSSGF*LLCQSV Trigger: GACTGATTGGCAAAGAAGGCAGAAACCTGAAGAAAA...AACCAAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CCA 90 bp | GCTCAAAGTTCCTTTCTATACCAGTGGACCTCACCCAATACTTTATTCTTGGAACCTCTCACTGACATCTaGACCTTCTGCTGGAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: AQSSFLYQWTSPNTLFLEPLTDI*TFCWSN Trigger: ATTGCTCCAGCAGAAGGTCCAGATGTCAGTGAGAGG...TTCCAAGAATAAAGTATTGGGTGAGGTCCACTGGTATAGAAAGGAACTTTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR GCA 90 bp | ATACATGTACAGAGACAACTTTCCACAACAAAGAAACGGCTAGGAATTTTGCTTTCTCGGGGTTATAAATaGTCAAATCCTGCAAGGATG | + |
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Preference number: 4 (lower is better) Translates to: IHVQRQLSTTKKRLGILLSRGYK*SNPARM Trigger: CATCCTTGCAGGATTTGAGCATTTATAACCCCGAGA...AAGCAAAATTCCTAGCCGTTTCTTTGTTGTGGAAAGTTGTCTCTGTACATGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | GGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTCCTGGTCTGCTGGAGCAATCTaGATGGAGGCACCAGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: GAGQAVFLDNLAFPVPSWSAGAI*MEAPAN Trigger: ATTTGCTGGTGCCTCCATCAAGATTGCTCCAGCAGA...CCAGGAGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | AGCTGGGGGCAGGCCAAGCGGTGTTTCTGGACAACCTGGCCTTCCCTGTGCCCTACCTCCTCAGCCAGTTaGGTCTCATCAGCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: SWGQAKRCFWTTWPSLCPTSSAS*VSSASF Trigger: AAAAGAAGCTGATGAGACCAAACTGGCTGAGGAGGT...AGGGCACAGGGAAGGCCAGGTTGTCCAGAAACACCGCTTGGCCTGCCCCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | CTGCAGGCCCTGGCTGCTCTGCAGACTGCGCACTCCTCGGGATGCTCTTTGGTTACCTCCTCAGCCAGTTaGGTCTCATCAGCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LQALAALQTAHSSGCSLVTSSAS*VSSASF Trigger: AAAAGAAGCTGATGAGACCAAACTGGCTGAGGAGGT...AACCAAAGAGCATCCCGAGGAGTGCGCAGTCTGCAGAGCAGCCAGGGCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | CTGAGTTGGATGGGCAGTGGATGGCTGTTATGCCTGCAGAAGCCAGGGGAAGCTAGCCCTGGGATCAGATaGGCTTGTTGGTTAACGGCC | + |
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Preference number: 5 (lower is better) Translates to: LSWMGSGWLLCLQKPGEASPGIR*ACWLTA Trigger: GGCCGTTAACCAACAAGCCAATCTGATCCCAGGGCT...AGCTTCCCCTGGCTTCTGCAGGCATAACAGCCATCCACTGCCCATCCAACTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | GCTCAAAGTTCCTTTCTATACCAGTGGACCTCACCCAATACTTTATTCTTGGAATCTGCTGGAGCAATCTaGATGGAGGCACCAGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: AQSSFLYQWTSPNTLFLESAGAI*MEAPAN Trigger: ATTTGCTGGTGCCTCCATCAAGATTGCTCCAGCAGA...TTCCAAGAATAAAGTATTGGGTGAGGTCCACTGGTATAGAAAGGAACTTTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | GCTCAAAGTTCCTTTCTATACCAGTGGACCTCACCCAATACTTTATTCTTGGAAGATGAGATGGTTATCTaGGTCCCTGTCTCATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: AQSSFLYQWTSPNTLFLEDEMVI*VPVSCS Trigger: AGAACATGAGACAGGGACCAAGATAACCATCTCATC...TTCCAAGAATAAAGTATTGGGTGAGGTCCACTGGTATAGAAAGGAACTTTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS-3UTR CAA 90 bp | ATACATGTACAGAGACAACTTTCCACAACAAAGAAACGGCTAGGAATTTTGCTTGATGAGATGGTTATCTaGGTCCCTGTCTCATGTTCT | + |
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Preference number: 5 (lower is better) Translates to: IHVQRQLSTTKKRLGILLDEMVI*VPVSCS Trigger: AGAACATGAGACAGGGACCAAGATAACCATCTCATC...AAGCAAAATTCCTAGCCGTTTCTTTGTTGTGGAAAGTTGTCTCTGTACATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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| CDS TCA 72 bp | GCACAGACAGTCCAGTCGAAAAGATGCCAAGTGCACTaGGGTTTAGCCCTGGGATCAGATTGGCTTGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: AQTVQSKRCQVH*GLALGSDWLVG Trigger: ACCAACAAGCCAATCTGATCCCAGGGCTAAACCTCAGTGCACTTGGCATCTTTTCGACTGGACTGTCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100052.11 ENSMUST00000115379.2 |
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