Pregenerated sensors for IGF2BP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013415Ensembl transcript IDs: ENSMUST00000013559.3
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGCCAGTCTGCCAGGCCTGAAGGGAACTCCACGGTGCCATCTCTaGAGTGGGGACAGGGGAGGAGAGCAGTCCCACAGGGAGCCCAAG | + |
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Preference number: 1 (lower is better) Translates to: TASLPGLKGTPRCHL*SGDRGGEQSHREPK Trigger: CTTGGGCTCCCTGTGGGACTGCTCTCCTCCCCTGTCCCCACTGCAGAGATGGCACCGTGGAGTTCCCTTCAGGCCTGGCAGACTGGCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | CTGAGAGAGAATGGTGGGAATCAGGGACCGTGGTCAGCCCTACCCTaGAGCACGCAGCACCACTCCCCTGTACCAGGGCACCGTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: LRENGGNQGPWSALP*STQHHSPVPGHRAG Trigger: TCCTGCACGGTGCCCTGGTACAGGGGAGTGGTGCTGCGTGCTTCAGGGTAGGGCTGACCACGGTCCCTGATTCCCACCATTCTCTCTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | AGGAGCTCAGGGTTGGGTTGTAGTCCGACCACCACAAGGGAACAGTaGCGTGGTGGGGACACACACACCGCAACAGCTGCCTCAGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: RSSGLGCSPTTTREQ*RGGDTHTATAASAL Trigger: AAGGGCTGAGGCAGCTGTTGCGGTGTGTGTGTCCCCACCACGGCACTGTTCCCTTGTGGTGGTCGGACTACAACCCAACCCTGAGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | ACACACACCGCAACAGCTGCCTCAGCCCTTGTCAAAGCACGCGGGTaGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCG | + |
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Preference number: 1 (lower is better) Translates to: THTATAASALVKARG*SESTFGPLNSSTEP Trigger: CGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGGCTGAGGCAGCTGTTGCGGTGTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | GCCAAGGATAGAAGCCAGGGCCTCGTCCGTGCCGGGCAAGCACTGTaGCCGGCGAGCTCTATCCTTAGCCCAAGGACTCCTTTTAAACGT | + |
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Preference number: 1 (lower is better) Translates to: AKDRSQGLVRAGQAL*PASSILSPRTPFKR Trigger: ACGTTTAAAAGGAGTCCTTGGGCTAAGGATAGAGCTCGCCGGGCACAGTGCTTGCCCGGCACGGACGAGGCCCTGGCTTCTATCCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | GGCAGGGAGACGGGGAGGGCAGTTATGGAGGGTCCGCTGGCCTTGTaGTCTATGCAGAATGACACAGACAAGAACAAGGTGGGGTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GRETGRAVMEGPLAL*SMQNDTDKNKVGWE Trigger: TTCCCACCCCACCTTGTTCTTGTCTGTGTCATTCTGCATAGACCACAAGGCCAGCGGACCCTCCATAACTGCCCTCCCCGTCTCCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | GGTCACATGAGGTTCCCTAACGAGTCCAGAAGCACCCCTGCCCAGTaGTCCTGTTTGAGATGTCCAGGTCACCTGGCCAGAGCTGTGACA | + |
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Preference number: 1 (lower is better) Translates to: GHMRFPNESRSTPAQ*SCLRCPGHLARAVT Trigger: TGTCACAGCTCTGGCCAGGTGACCTGGACATCTCAAACAGGAGCACTGGGCAGGGGTGCTTCTGGACTCGTTAGGGAACCTCATGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | GCCCTCCCCGGAAGCCGTGTCCTCGGACTGCCTATCAACCCATTCTaGCAGAGTGGGCTCTTCTCATTCAACTCTGGTTTCGGAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: ALPGSRVLGLPINPF*QSGLFSFNSGFGEQ Trigger: CTGTTCTCCGAAACCAGAGTTGAATGAGAAGAGCCCACTCTGGCAGAATGGGTTGATAGGCAGTCCGAGGACACGGCTTCCGGGGAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | TGCCTCAGCCCTTGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTTaGGCCACTCAACTCCTCCACAGAACCGAGACTTTACCAAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: CLSPCQSTRVEREHL*ATQLLHRTETLPKG Trigger: TCCCTTTGGTAAAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGGCTGAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | ACACACACACACCTCCCGAGGGGACTCAGTGGAGGCAGAGGATCTTaGAGAAACCCTGTTGAAGAGGCCCCGGTTCCCAAGTTAGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: THTHLPRGLSGGRGS*RNPVEEAPVPKLGA Trigger: AGCTCCTAACTTGGGAACCGGGGCCTCTTCAACAGGGTTTCTTCAAGATCCTCTGCCTCCACTGAGTCCCCTCGGGAGGTGTGTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | CCCCTCACAGACAGGCCTAGGAGATGTAGAAAGATGGCCGGCCACTaGTTTGTCTTAGAAACAGCCTCTCAGCCTCTGTCTGTCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: PLTDRPRRCRKMAGH*FVLETASQPLSVCL Trigger: CAGACAGACAGACAGAGGCTGAGAGGCTGTTTCTAAGACAAAGCAGTGGCCGGCCATCTTTCTACATCTCCTAGGCCTGTCTGTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | TTCGTTCATCCATTCAATAAACAAACTAGCCAAGTCCGAGCCCGCTaGCCCTCCCCCAGCTTCAAGAACAGAGAAGGGAGGGAGGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: FVHPFNKQTSQVRAR*PSPSFKNREGREEG Trigger: GCCTTCCTCCCTCCCTTCTCTGTTCTTGAAGCTGGGGGAGGGGCAGCGGGCTCGGACTTGGCTAGTTTGTTTATTGAATGGATGAACGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | CCCATGACAAACCTAGTGTGGCATAAGCCAAAACTCTCTCCTGGCTaGGATTCATCCCCGAGGCATGAGTCCCTGCCCTCATCTCCAATC | + |
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Preference number: 1 (lower is better) Translates to: PMTNLVWHKPKLSPG*DSSPRHESLPSSPI Trigger: GATTGGAGATGAGGGCAGGGACTCATGCCTCGGGGATGAATCCCAGCCAGGAGAGAGTTTTGGCTTATGCCACACTAGGTTTGTCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | GCTGAGGTAACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTaGCTGACTCCGCCCACACGTCACGGTAGCTTTGTCACTGTTGTC | + |
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Preference number: 1 (lower is better) Translates to: AEVTSHLEVVYFAQH*LTPPTRHGSFVTVV Trigger: GACAACAGTGACAAAGCTACCGTGACGTGTGGGCGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | AACCCAAGCTATGATTGCAATGGTGATATTCCAAGGGGTGGGCTGTaGCCAGCTGGCTCAATTGGGGGCGAGAGATCAGGATTCCTCACT | + |
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Preference number: 1 (lower is better) Translates to: NPSYDCNGDIPRGGL*PAGSIGGERSGFLT Trigger: AGTGAGGAATCCTGATCTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCATTGCAATCATAGCTTGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | TCCAATGAGCTTATAAGCAGTGGTTCACATAAAACTGTGGTCACATaGGGTTCCCTAACGAGTCCAGAAGCACCCCTGCCCAGTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SNELISSGSHKTVVT*GSLTSPEAPLPSAP Trigger: AGGAGCACTGGGCAGGGGTGCTTCTGGACTCGTTAGGGAACCTCATGTGACCACAGTTTTATGTGAACCACTGCTTATAAGCTCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | TTGAGTCACCAGACAACCCAAATAAGCCAGGCTCTCCCTTCCTGCTaGCCTCTGCCCCTAGTCCATATTCTTACTTTCATTAGGAAGCCA | + |
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Preference number: 1 (lower is better) Translates to: LSHQTTQISQALPSC*PLPLVHILTFIRKP Trigger: TGGCTTCCTAATGAAAGTAAGAATATGGACTAGGGGCAGAGGTCAGCAGGAAGGGAGAGCCTGGCTTATTTGGGTTGTCTGGTGACTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR GCA 90 bp | AGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTaGAATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RTSRQSTFKSNPSYD*NGDIPRGGLWPAGS Trigger: TGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | TTGCCTAGTCCATGTAAGTTTTCAGGTCCCTTGTCACACATGTTCTaGTCTCTTCTGGGAGCTCAATCAGCTAAAGGGAAGGACTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: LPSPCKFSGPLSHMF*SLLGAQSAKGKDLD Trigger: GTCCAAGTCCTTCCCTTTAGCTGATTGAGCTCCCAGAAGAGATCAGAACATGTGTGACAAGGGACCTGAAAACTTACATGGACTAGGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | GATGTGACCAGACAAGGAGATCACTGGGAAAGCCGTATCATTACGTaGCATGTGACAACTGCCAAAGAGGAAACCATATGTATGGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: DVTRQGDHWESRIIT*HVTTAKEETICMGE Trigger: TTCCCCCATACATATGGTTTCCTCTTTGGCAGTTGTCACATGTCACGTAATGATACGGCTTTCCCAGTGATCTCCTTGTCTGGTCACATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CCA 90 bp | TATTTCTCTTCCCCACTGGGATCTGACCCATCCTTCCATGGAGGCTaGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTAT | + |
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Preference number: 1 (lower is better) Translates to: YFSSPLGSDPSFHGG*RTSRQSTFKSNPSY Trigger: ATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCAGCCTCCATGGAAGGATGGGTCAGATCCCAGTGGGGAAGAGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | CCACTTGAAATCACTAAATGGCCGATGTCTGAACATTGTCTGCTTTaGATGGGAACAAAGCACATAGAGCCAGGTGGGAAGCTTAATTCT | + |
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Preference number: 1 (lower is better) Translates to: PLEITKWPMSEHCLL*MGTKHIEPGGKLNS Trigger: AGAATTAAGCTTCCCACCTGGCTCTATGTGCTTTGTTCCCATTCAAAGCAGACAATGTTCAGACATCGGCCATTTAGTGATTTCAAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | ACTACGTGTGTAGTGCACACACACACACCTCTATACATAGACCTCTaGGCACAGAAGCAGTTTCTTCTAAAGGTTGCTTTTCTCAACTGT | + |
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Preference number: 1 (lower is better) Translates to: TTCVVHTHTPLYIDL*AQKQFLLKVAFLNC Trigger: ACAGTTGAGAAAAGCAACCTTTAGAAGAAACTGCTTCTGTGCTCAGAGGTCTATGTATAGAGGTGTGTGTGTGTGCACTACACACGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | CTCTTCTCATTCAACTCTGGTTTCGGAGAACAGAATCACGATTTCTaGAGAGAAGGGAGACTCCAAATGGTGGTAAAAGGTATTTATTCA | + |
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Preference number: 1 (lower is better) Translates to: LFSFNSGFGEQNHDF*REGRLQMVVKGIYS Trigger: TGAATAAATACCTTTTACCACCATTTGGAGTCTCCCTTCTCTTCAGAAATCGTGATTCTGTTCTCCGAAACCAGAGTTGAATGAGAAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR TCA 90 bp | AGGAAAGAAACACCATGTTTCAGCTGGTATTACTCTATGTATGTCTaGATACAAGAACAACATTCTGCACCTAAACCATTGAGTATCTGG | + |
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Preference number: 1 (lower is better) Translates to: RKETPCFSWYYSMYV*IQEQHSAPKPLSIW Trigger: CCAGATACTCAATGGTTTAGGTGCAGAATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTGTTTCTTTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | AGTGCCGTGGTGGGGACACACACACCGCAACAGCTGCCTCAGCCCTaGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTTGGGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SAVVGTHTPQQLPQP*SKHAGGARAPLGHS Trigger: TGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGGCTGAGGCAGCTGTTGCGGTGTGTGTGTCCCCACCACGGCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTTGGGCTGTGGCCAGCTaGCTCAATTGGGGGCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GWSESTFGPLNSSTEPRLWAVAS*LNWGRE Trigger: CTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCA...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGCGGGGACCCCGAGCACAGGCAGAGAGGCCTTCCTTTCTTCCCAGCACACTTCAGGAGCTCAGGGTTaGGTTGTAGTCCGACCACCA | + |
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Preference number: 2 (lower is better) Translates to: EAGTPSTGREAFLSSQHTSGAQG*VVVRPP Trigger: TGGTGGTCGGACTACAACCCAACCCTGAGCTCCTGA...AGTGTGCTGGGAAGAAAGGAAGGCCTCTCTGCCTGTGCTCGGGGTCCCCGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | CTGCCTCAGCCCTTGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTaGGGCCACTCAACTCCTCCACAGAACCGAGACTTTACCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LPQPLSKHAGGARAP*GHSTPPQNRDFTKG Trigger: CCCTTTGGTAAAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGGCTGAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR TCA 90 bp | AGACCCCAGAGGGGGTTAAAGCCACTGCGGTGTAAGCGGCAGATGCAGCTTCAAGCTCTCCCTTCCTGCTaGCCTCTGCCCCTAGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: RPQRGLKPLRCKRQMQLQALPSC*PLPLVH Trigger: ATGGACTAGGGGCAGAGGTCAGCAGGAAGGGAGAGC...TTGAAGCTGCATCTGCCGCTTACACCGCAGTGGCTTTAACCCCCTCTGGGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTCCGCCTGAGAGAGAATaGTGGGAATCAGGGACCGTG | + |
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Preference number: 2 (lower is better) Translates to: GWSESTFGPLNSSTEPRLPPERE*WESGTV Trigger: CACGGTCCCTGATTCCCACCATTCTCTCTCAGGCGG...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | AGGTTCCCTAACGAGTCCAGAAGCACCCCTGCCCAGTGCTCCTGTTaGAGATGTCCAGGTCACCTGGCCAGAGCTGTGACAGGAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: RFPNESRSTPAQCSC*RCPGHLARAVTGST Trigger: TGTGCTTCCTGTCACAGCTCTGGCCAGGTGACCTGGACATCTCAAACAGGAGCACTGGGCAGGGGTGCTTCTGGACTCGTTAGGGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAAAACTCTCTCCTGGCTaGGATTCATCCCCGAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPKLSPG*DSSPRH Trigger: ATGCCTCGGGGATGAATCCCAGCCAGGAGAGAGTTT...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | GAAGAGTTGCCTAAATCGACAGCTCCTCCTGGGGCTCAGTTAGGCTaGGCGCCCTCTGGGGCTGAGGTAGTTAATAGCACTGCTGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: EELPKSTAPPGAQLG*APSGAEVVNSTAGS Trigger: GGAACCAGCAGTGCTATTAACTACCTCAGCCCCAGAGGGCGCCAAGCCTAACTGAGCCCCAGGAGGAGCTGTCGATTTAGGCAACTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCATTAACTGATGGCCGCTaGCCTCCACAAGGGTTAACT | + |
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Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPLTDGR*PPQGLT Trigger: AGTTAACCCTTGTGGAGGGCAGCGGCCATCAGTTAA...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR TCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGAGACAGTGTGCAAACCTaGTCTCCAGCCAGGCCCAAA | + |
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Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRDSVQT*SPARPK Trigger: TTTGGGCCTGGCTGGAGATCAGGTTTGCACACTGTC...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCATCACAATCTTGCTGCTaGGCAAATCCAGCCATGAGT | + |
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Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPSQSCC*ANPAMS Trigger: ACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGA...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR TCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAGGTAACTTCACACCTTaGGGTAGTTTACTTCGCACA | + |
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Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPGNFTP*GSLLRT Trigger: TGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACC...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCGTTCTCAAGACAGTGTaGAAACCTGATCTCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPVLKTV*KPDLQP Trigger: TGGCTGGAGATCAGGTTTGCACACTGTCTTGAGAAC...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTCATTCTCAGGCCTGCTaGGAAGAGCACACCGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: LSQSCCWANPAMSGTLPSHSQAC*EEHTGP Trigger: AGGGCCGGTGTGCTCTTCCCAGCAGGCCTGAGAATG...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | GCTGGCTCAATTGGGGGCGAGAGATCAGGATTCCTCACTGGAACATaGTTCTCAAGACAGTGTGCAAACCTGATCTCCAGCCAGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: AGSIGGERSGFLTGT*FSRQCANLISSQAQ Trigger: TTGGGCCTGGCTGGAGATCAGGTTTGCACACTGTCTTGAGAACAATGTTCCAGTGAGGAATCCTGATCTCTCGCCCCCAATTGAGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 90 bp | GCAATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATaGGGGGCGAGAGATCAGGATTCCTCACTGGAACATTGTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: AMVIFQGVGCGQLAQ*GARDQDSSLEHCSQ Trigger: TTGAGAACAATGTTCCAGTGAGGAATCCTGATCTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTAACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTGCCTGACTCCGCTGTGTTCCTCCTGCTaGTCTTGGAGCCAATGGGAC | + |
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Preference number: 2 (lower is better) Translates to: EVTSHLEVVYFAQHCLTPLCSSC*SWSQWD Trigger: GTCCCATTGGCTCCAAGATCAGCAGGAGGAACACAG...CGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTGAGAGACCGTGGCTGTaGTGGGGACCAAGTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: LSQSCCWANPAMSGTLPSERPWL*WGPSGK Trigger: CTTACCACTTGGTCCCCATCACAGCCACGGTCTCTC...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR GCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAGCCAGGAGGAATTTCTaGTGTGCCAATTTTTCAAGA | + |
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Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPARRNF*CANFSR Trigger: TCTTGAAAAATTGGCACAGCAGAAATTCCTCCTGGC...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGAAAGATGGCCGGCCACTaGTTTGTCTTAGAAACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRKMAGH*FVLETA Trigger: GGCTGTTTCTAAGACAAAGCAGTGGCCGGCCATCTT...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTGCCTGACTCCGCCTGAGAGAGAATGGTaGGAATCAGGGACCGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: EVTSHLEVVYFAQHCLTPPEREW*ESGTVV Trigger: GACCACGGTCCCTGATTCCCACCATTCTCTCTCAGG...CGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGAATGCGGCTGGTACTCTaGTTTGTTTTCAGGCACACC | + |
|
Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRMRLVL*FVFRHT Trigger: GGTGTGCCTGAAAACAAACCAGAGTACCAGCCGCAT...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCACTAAAGTGCATCACCTaGCTAATATGCATTACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPLKCIT*LICITV Trigger: GACTGTAATGCATATTAGCCAGGTGATGCACTTTAG...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGACCGATGGGAACAGAGTaGCCTTGTCTTTCCCATAAA | + |
|
Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRPMGTE*PCLSHK Trigger: TTTATGGGAAAGACAAGGCCACTCTGTTCCCATCGG...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGACCAGGTATCAAAGCATaGTTGCTGCAAGAAATCCAC | + |
|
Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRPGIKA*LLQEIH Trigger: GTGGATTTCTTGCAGCAAGCATGCTTTGATACCTGG...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCACTTGAAATCACTAAATaGCCGATGTCTGAACATTGT | + |
|
Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPLEITK*PMSEHC Trigger: ACAATGTTCAGACATCGGCCATTTAGTGATTTCAAG...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAACACCATGTTTCAGCTaGTATTACTCTATGTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPTPCFS*YYSMYV Trigger: GACATACATAGAGTAATACCAGCTGAAACATGGTGT...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAGCTGTTCCTAATGGTTaGTTAAGGAAAAATCAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPAVPNG*LRKNQN Trigger: ATTCTGATTTTTCCTTAACCAACCATTAGGAACAGC...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAAAACCATTGAGTATCTaGAAGGAAAATGGCTTTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPKPLSI*KENGFY Trigger: GTAAAAGCCATTTTCCTTCCAGATACTCAATGGTTT...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGATGTCTGAACATTGTCTaGTTTGAATGGGAACAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRCLNIV*FEWEQS Trigger: GCTTTGTTCCCATTCAAAGCAGACAATGTTCAGACA...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTTCCTCTTCCTCCTCTTaGCTACCCACCACTCTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSQSCCWANPAMSGTLPSSSSSS*LPTTLK Trigger: TTTTAGAGTGGTGGGTAGCCAAGAGGAGGAAGAGGA...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTaGCCTAGTCCATGTAAGTTTTCAGGTCCCTTGTCACACATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSQSCCWANPAMSGT*PSPCKFSGPLSHMF Trigger: GAACATGTGTGACAAGGGACCTGAAAACTTACATGGACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATCAGGCCCAAATGCCCTaGTTCCCACTCATTCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNQAQMP*FPLILR Trigger: CCTGAGAATGAGTGGGAATCAGGGCATTTGGGCCTG...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTATCACCTGGCTAATATaGATTACAGTCAGTACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSQSCCWANPAMSGTLPSITWLI*ITVSTG Trigger: TCCTGTACTGACTGTAATGCATATTAGCCAGGTGAT...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR GCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTACTCATTCTCAGGCCTaGTGGGAAGAGCACACCGGC | + |
|
Preference number: 2 (lower is better) Translates to: HHVSAGITLCMSEYKNNITHSQA*WEEHTG Trigger: GCCGGTGTGCTCTTCCCAGCAGGCCTGAGAATGAGT...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTACTAAGTCCACAAACTaGAAAAGGCAACCAGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: VVFIICDYEKHTLQEHPATKSTN*KRQPDP Trigger: GGGGTCTGGTTGCCTTTTGCAGTTTGTGGACTTAGT...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTAGCTGCCCTAAGATCTaGCCTTTGAGTCACCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: HHVSAGITLCMSEYKNNISCPKI*PLSHQT Trigger: TGTCTGGTGACTCAAAGGCCAGATCTTAGGGCAGCT...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATATCAGGATTCCTCACTaGAACATTGTTCTCAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNIRIPH*NIVLKT Trigger: TGTCTTGAGAACAATGTTCCAGTGAGGAATCCTGAT...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTTGTTCTGATCTCTTCTaGGAGCTCAATCAGCTAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HHVSAGITLCMSEYKNNICSDLF*ELNQLK Trigger: CTTTAGCTGATTGAGCTCCCAGAAGAGATCAGAACA...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | AGAAGCCAGGGCCTCGTCCGTGCCGGGCAAGCACTGTaGCCGGCGAGCTCTATCCTTAGCCCAAGGACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RSQGLVRAGQAL*PASSILSPRTP Trigger: AGGAGTCCTTGGGCTAAGGATAGAGCTCGCCGGGCACAGTGCTTGCCCGGCACGGACGAGGCCCTGGCTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | AATGGTGGGAATCAGGGACCGTGGTCAGCCCTACCCTaGAGCACGCAGCACCACTCCCCTGTACCAGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NGGNQGPWSALP*STQHHSPVPGH Trigger: GTGCCCTGGTACAGGGGAGTGGTGCTGCGTGCTTCAGGGTAGGGCTGACCACGGTCCCTGATTCCCACCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | GGGTTGGGTTGTAGTCCGACCACCACAAGGGAACAGTaGCGTGGTGGGGACACACACACCGCAACAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GLGCSPTTTREQ*RGGDTHTATAA Trigger: GGCAGCTGTTGCGGTGTGTGTGTCCCCACCACGGCACTGTTCCCTTGTGGTGGTCGGACTACAACCCAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | CACCTCCCGAGGGGACTCAGTGGAGGCAGAGGATCTTaGAGAAACCCTGTTGAAGAGGCCCCGGTTCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLPRGLSGGRGS*RNPVEEAPVPK Trigger: CTTGGGAACCGGGGCCTCTTCAACAGGGTTTCTTCAAGATCCTCTGCCTCCACTGAGTCCCCTCGGGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | CAACCTAAGGAGGCAGGGAGACGGGGAGGGCAGTTATaGAGGGTCCGCTGGCCTTGTGGTCTATGCAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: QPKEAGRRGGQL*RVRWPCGLCRM Trigger: CATTCTGCATAGACCACAAGGCCAGCGGACCCTCCATAACTGCCCTCCCCGTCTCCCTGCCTCCTTAGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | AGGTTCCCTAACGAGTCCAGAAGCACCCCTGCCCAGTaGTCCTGTTTGAGATGTCCAGGTCACCTGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RFPNESRSTPAQ*SCLRCPGHLAR Trigger: TCTGGCCAGGTGACCTGGACATCTCAAACAGGAGCACTGGGCAGGGGTGCTTCTGGACTCGTTAGGGAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | GGGCAGTTATGGAGGGTCCGCTGGCCTTGTGGTCTATaGAGAATGACACAGACAAGAACAAGGTGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GQLWRVRWPCGL*RMTQTRTRWGG Trigger: CCCACCCCACCTTGTTCTTGTCTGTGTCATTCTGCATAGACCACAAGGCCAGCGGACCCTCCATAACTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | CCTTGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTTaGGCCACTCAACTCCTCCACAGAACCGAGACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PCQSTRVEREHL*ATQLLHRTETL Trigger: TAAAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | AAAATAAAGCCCTCCCCGGAAGCCGTGTCCTCGGACTaGCTATCAACCCATTCTGCCAGAGTGGGCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KIKPSPEAVSSD*LSTHSARVGSS Trigger: AGAAGAGCCCACTCTGGCAGAATGGGTTGATAGGCAGTCCGAGGACACGGCTTCCGGGGAGGGCTTTATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | CCATTCAATAAACAAACTAGCCAAGTCCGAGCCCGCTaGCCCTCCCCCAGCTTCAAGAACAGAGAAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PFNKQTSQVRAR*PSPSFKNREGR Trigger: CCTCCCTTCTCTGTTCTTGAAGCTGGGGGAGGGGCAGCGGGCTCGGACTTGGCTAGTTTGTTTATTGAATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | TATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTaGGGGCGAGAGATCAGGATTCCTCACTGGAACATT | + |
|
Preference number: 3 (lower is better) Translates to: YSKGWAVASWLN*GREIRIPHWNI Trigger: AATGTTCCAGTGAGGAATCCTGATCTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | AACCTAGTGTGGCATAAGCCAAAACTCTCTCCTGGCTaGGATTCATCCCCGAGGCATGAGTCCCTGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NLVWHKPKLSPG*DSSPRHESLPS Trigger: TGAGGGCAGGGACTCATGCCTCGGGGATGAATCCCAGCCAGGAGAGAGTTTTGGCTTATGCCACACTAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | GGGCAAGCCTGCCCGATCCCCATGACAAACCTAGTGTaGCATAAGCCAAAACTCTCTCCTGGCTGGGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: GQACPIPMTNLV*HKPKLSPGWDS Trigger: TGAATCCCAGCCAGGAGAGAGTTTTGGCTTATGCCACACTAGGTTTGTCATGGGGATCGGGCAGGCTTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | ACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTaGCTGACTCCGCCCACACGTCACGGTAGCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSHLEVVYFAQH*LTPPTRHGSFV Trigger: GACAAAGCTACCGTGACGTGTGGGCGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | GGAAGCCGTGTCCTCGGACTGCCTATCAACCCATTCTaGCAGAGTGGGCTCTTCTCATTCAACTCTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSRVLGLPINPF*QSGLFSFNSGF Trigger: GAAACCAGAGTTGAATGAGAAGAGCCCACTCTGGCAGAATGGGTTGATAGGCAGTCCGAGGACACGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | TATGATTGCAATGGTGATATTCCAAGGGGTGGGCTGTaGCCAGCTGGCTCAATTGGGGGCGAGAGATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YDCNGDIPRGGL*PAGSIGGERSG Trigger: TCCTGATCTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCATTGCAATCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | AAGCCCCAGCTGGCCGGCCAGGAGGAATTTCTGCTGTaGCAATTTTTCAAGATCTGCAAGAGCTCAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: KPQLAGQEEFLL*QFFKICKSSAI Trigger: TATGGCTGAGCTCTTGCAGATCTTGAAAAATTGGCACAGCAGAAATTCCTCCTGGCCGGCCAGCTGGGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | GACAGGCCTAGGAGATGTAGAAAGATGGCCGGCCACTaGTTTGTCTTAGAAACAGCCTCTCAGCCTCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DRPRRCRKMAGH*FVLETASQPLS Trigger: AGACAGAGGCTGAGAGGCTGTTTCTAAGACAAAGCAGTGGCCGGCCATCTTTCTACATCTCCTAGGCCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTGAGGACCTGGGCTCCTaGGAGTTTTCCACTTCACCA | + |
|
Preference number: 3 (lower is better) Translates to: LSQSCCWANPAMSGTLPSEDLGS*EFSTSP Trigger: TGGTGAAGTGGAAAACTCCAAGGAGCCCAGGTCCTC...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | TTTACATCCCCTGGCATTGATGAGGGGGTCTCTTCCTaGAATGTCCTGCCAAGCTGGTCTCCTTCTATTGGT | + |
|
Preference number: 3 (lower is better) Translates to: FTSPGIDEGVSS*NVLPSWSPSIG Trigger: ACCAATAGAAGGAGACCAGCTTGGCAGGACATTGCAGGAAGAGACCCCCTCATCAATGCCAGGGGATGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGACCCATAAACGGAGTCTaGGCTCCCATATTTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRPINGV*APIFLK Trigger: CTTTAAAAATATGGGAGCCAAGACTCCGTTTATGGG...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | CTGGCATTGATGAGGGGGTCTCTTCCTGCAATGTCCTaGCAAGCTGGTCTCCTTCTATTGGTTTTCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LALMRGSLPAMS*QAGLLLLVFNK Trigger: TTTGTTGAAAACCAATAGAAGGAGACCAGCTTGGCAGGACATTGCAGGAAGAGACCCCCTCATCAATGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | GAAGCATGTGGCCTGTCCCGGATCTTGAACCCTCACTaGGATGTATCCAAAGGAAAGAAACACCATGTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: EACGLSRILNPH*DVSKGKKHHVS Trigger: TGAAACATGGTGTTTCTTTCCTTTGGATACATCTCAGTGAGGGTTCAAGATCCGGGACAGGCCACATGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | GAGATCACTGGGAAAGCCGTATCATTACGTGACATGTaGCAACTGCCAAAGAGGAAACCATATGTATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EITGKAVSLRDM*QLPKRKPYVWG Trigger: CCCCCATACATATGGTTTCCTCTTTGGCAGTTGTCACATGTCACGTAATGATACGGCTTTCCCAGTGATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | AGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTaGAATGGTGATATTCCAAGGGGTGGGCTGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQSTFKSNPSYD*NGDIPRGGLWP Trigger: TGGCCACAGCCCACCCCTTGGAATATCACCATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CCA 72 bp | CTTTCATTAGGAAGCCAACTTTCACAATCTTGCTGCTaGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSLGSQLSQSCC*ANPAMSGTLPS Trigger: ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAGTTGGCTTCCTAATGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTTCTCTCCTTTATATCTaGCTGTTCCTAATGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSQSCCWANPAMSGTLPSSLLYI*LFLMVG Trigger: ACCAACCATTAGGAACAGCAAGATATAAAGGAGAGA...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTGGCTGGTACTCTGGTTaGTTTTCAGGCACACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVFIICDYEKHTLQEHPAGWYSG*FSGTPF Trigger: GAAAGGTGTGCCTGAAAACAAACCAGAGTACCAGCC...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTTTGTCACTGTTGTCCTaGCAATATCAGGAAGCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: VVFIICDYEKHTLQEHPALSLLS*QYQEAG Trigger: CCCCGCTTCCTGATATTGCAAGGACAACAGTGACAA...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | CCATGTAAGTTTTCAGGTCCCTTGTCACACATGTTCTaGTCTCTTCTGGGAGCTCAATCAGCTAAAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCKFSGPLSHMF*SLLGAQSAKGK Trigger: CTTCCCTTTAGCTGATTGAGCTCCCAGAAGAGATCAGAACATGTGTGACAAGGGACCTGAAAACTTACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | TTACTTTCATTAGGAAGCCAACTTTCACAATCTTGCTaGTGGGCAAATCCAGCCATGAGTGGAACCTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLSLGSQLSQSC*WANPAMSGTLP Trigger: AGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAGTTGGCTTCCTAATGAAAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | AGACAAGGAGATCACTGGGAAAGCCGTATCATTACGTaGCATGTGACAACTGCCAAAGAGGAAACCATATGT | + |
|
Preference number: 3 (lower is better) Translates to: RQGDHWESRIIT*HVTTAKEETIC Trigger: ACATATGGTTTCCTCTTTGGCAGTTGTCACATGTCACGTAATGATACGGCTTTCCCAGTGATCTCCTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR GCA 72 bp | TTCTTACTTTCATTAGGAAGCCAACTTTCACAATCTTaGTGCTGGGCAAATCCAGCCATGAGTGGAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLLSLGSQLSQS*CWANPAMSGTL Trigger: CAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAGTTGGCTTCCTAATGAAAGTAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTTTCCTCACTGGAACATaGTTCTCAAGACAGTGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVFIICDYEKHTLQEHPAFLTGT*FSRQCA Trigger: TGCACACTGTCTTGAGAACAATGTTCCAGTGAGGAA...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR TCA 72 bp | TTCAACTCTGGTTTCGGAGAACAGAATCACGATTTCTaGAGAGAAGGGAGACTCCAAATGGTGGTAAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FNSGFGEQNHDF*REGRLQMVVKG Trigger: ACCTTTTACCACCATTTGGAGTCTCCCTTCTCTTCAGAAATCGTGATTCTGTTCTCCGAAACCAGAGTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR-3UTR CAA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTAGTGAGTCAAACCATTaGGCTTTTTATGTGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: VVFIICDYEKHTLQEHPASESNH*AFYVFP Trigger: TGGAAACACATAAAAAGCCAAATGGTTTGACTCACT...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCGGCTGGAGCCCCTGCTaGCACGGGCGACCCTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPGWSPC*HGRPLP Trigger: CGGCAAGGGTCGCCCGTGGCAGCAGGGGCTCCAGCC...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GAAGCGGGGACCCCGAGCACAGGCAGAGAGGCCTTCCTTTCTTCCCAGCACACTGCCTTCATCGCCCAGTaGTCGTCGGGGCAATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EAGTPSTGREAFLSSQHTAFIAQ*SSGQST Trigger: CGTGGATTGCCCCGACGAGCACTGGGCGATGAAGGC...AGTGTGCTGGGAAGAAAGGAAGGCCTCTCTGCCTGTGCTCGGGGTCCCCGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCCCCTGGGCCTTGAACTaGGCCTCTGGGGGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPPWALN*ASGGPV Trigger: CACTGGACCCCCAGAGGCTCAGTTCAAGGCCCAGGG...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | GTGGGGACACACACACCGCAACAGCTGCCTCAGCCCTaGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGTHTPQQLPQP*SKHAGGARAPL Trigger: CAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGGCTGAGGCAGCTGTTGCGGTGTGTGTGTCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCGGGGACCCCGAGCACAGGCAGAGAGGCCTTCCTTTCTTCCCAGCACACTGAGGAGGGACAGCGCTaGATGAAGCTGGGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EAGTPSTGREAFLSSQHTEEGQR*MKLGRD Trigger: GTCTCTTCCCAGCTTCATCCAGCGCTGTCCCTCCTC...AGTGTGCTGGGAAGAAAGGAAGGCCTCTCTGCCTGTGCTCGGGGTCCCCGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GCACGCGGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGGGGTCACACTCTCGTTaGGGTTGCCGATGTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARGWSESTFGPLNSSTEPGSHSR*GCRCKA Trigger: AGCTTTACATCGGCAACCTCAACGAGAGTGTGACCC...CGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTGCTCCGGAGCCTGCATaGAGGAGCTATAGGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GWSESTFGPLNSSTEPRLAPEPA*RSYREQ Trigger: CTGCTCCCTATAGCTCCTTCATGCAGGCTCCGGAGC...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GGGAAGAGCACACCGGCCCTCCACCCGCCCCTCCAGTTCTGTGTTCCTCCTGCTAGGTGTTTCTGGTGGTaGAATCTTGATGGAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GKSTPALHPPLQFCVPPARCFWW*NLDGGA Trigger: AGCGCCTCCATCAAGATTGCACCACCAGAAACACCT...AGCAGGAGGAACACAGAACTGGAGGGGCGGGTGGAGGGCCGGTGTGCTCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | ATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTGGGGGCGAGAGAGAGGGATGTCCACTaGCTGCTGCTTGGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MVIFQGVGCGQLAQLGARERDVH*LLLGWS Trigger: GCTCCAGCCAAGCAGCAGCCAGTGGACATCCCTCTC...TCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | CGCCCACACGTCACGGTAGCTTTGTCACTGTTGTCCTaGCAATATCAGGAAGCGGGGACCCCGAGCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPHVTVALSLLS*QYQEAGTPSTG Trigger: GCCTGTGCTCGGGGTCCCCGCTTCCTGATATTGCAAGGACAACAGTGACAAAGCTACCGTGACGTGTGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | ATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTGGGGGCGAGAAGGCGTAGCCGGATTTaGCCAAGAACTGGCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVIFQGVGCGQLAQLGARRRSRI*PRTGRC Trigger: ACAGCGGCCAGTTCTTGGTCAAATCCGGCTACGCCT...TCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTGCCCTTCCTTGCCAATaGGTCGCCCGACGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWSESTFGPLNSSTEPRLALPCQ*VARRSC Trigger: ACAACTTCGTCGGGCGACTCATTGGCAAGGAAGGGC...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | CCCTTGTCAAAGCACGCGGGTGGAGCGAGAGCACCTTaGGGCCACTCAACTCCTCCACAGAACCGAGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLSKHAGGARAP*GHSTPPQNRDF Trigger: AAAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCCGCGTGCTTTGACAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | GAAAGGCGACCTCGTCCCGAGAGAGGGGGAGAAGAGTaGCCTAAATCGACAGCTCCTCCTGGGGCTCAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ERRPRPERGGEE*PKSTAPPGAQL Trigger: TAACTGAGCCCCAGGAGGAGCTGTCGATTTAGGCAACTCTTCTCCCCCTCTCTCGGGACGAGGTCGCCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | AACGAGTCCAGAAGCACCCCTGCCCAGTGCTCCTGTTaGAGATGTCCAGGTCACCTGGCCAGAGCTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NESRSTPAQCSC*RCPGHLARAVT Trigger: TGTCACAGCTCTGGCCAGGTGACCTGGACATCTCAAACAGGAGCACTGGGCAGGGGTGCTTCTGGACTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTACTTCCCATCGGAGCTaGGGTGGAATATTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GWSESTFGPLNSSTEPRLTSHRS*GGILRI Trigger: GATCCGCAATATTCCACCTCAGCTCCGATGGGAAGT...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGACAGCCTGGGCGGGGATaGACACTTGTACCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRQPGRG*TLVPSP Trigger: AGGAGATGGTACAAGTGTTCATCCCCGCCCAGGCTG...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCTCTCCAAGATCATCTTaGACGCGGAGGAGCAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPSPRSS*TRRSSL Trigger: AAGGCTGCTCCTCCGCGTGCAAGATGATCTTGGAGA...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGATCCACTGTACCGTACTaGGCCAGCAGGCTATCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRSTVPY*ASRLSS Trigger: GCTAGATAGCCTGCTGGCTCAGTACGGTACAGTGGA...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | AGACCCCAGAGGGGGTTAAAGCCACTGCGGTGTAAGCGGCAGATGCAGCTTCAACCGACGAAGTTGTTATaGGCCAGGATCTTCAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQRGLKPLRCKRQMQLQPTKLL*ARIFRG Trigger: TCCCCTGAAGATCCTGGCTCATAACAACTTCGTCGG...TTGAAGCTGCATCTGCCGCTTACACCGCAGTGGCTTTAACCCCCTCTGGGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTTGCTGTTGCTTAACTTaGGCCAGGATGTCTCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: GWSESTFGPLNSSTEPRLCCCLT*ARMSRI Trigger: GATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCA...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | GAAGCGGGGACCCCGAGCACAGGCAGAGAGGCCTTCCTTTCTTCCCAGCACACTAGTTGTTTGATGTGCTaGCCCTTCTTGCCAATGATG | + |
|
Preference number: 4 (lower is better) Translates to: EAGTPSTGREAFLSSQHTSCLMC*PFLPMM Trigger: CATCATTGGCAAGAAGGGCCAGCACATCAAACAACT...AGTGTGCTGGGAAGAAAGGAAGGCCTCTCTGCCTGTGCTCGGGGTCCCCGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGATTCTCATCCGGGGTCTaGTCTCTTGGCACTACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRFSSGV*SLGTTT Trigger: GGTGGTAGTGCCAAGAGACCAGACCCCGGATGAGAA...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTCACTTCCTCCGAGCCTaGGCCAGGTTGCTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSCCWANPAMSGTLPSHFLRA*ARLLCP Trigger: GGGACAGAGCAACCTGGCCCAGGCTCGGAGGAAGTG...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | ATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATaGGGGGCGAGAGATCAGGATTCCTCACTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: IFQGVGCGQLAQ*GARDQDSSLEH Trigger: ATGTTCCAGTGAGGAATCCTGATCTCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTGAGCCTGGGCCAGGTTaGTCTGTCCCTTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSCCWANPAMSGTLPSEPGPG*SVPSGA Trigger: AGCACCAGAAGGGACAGAGCAACCTGGCCCAGGCTC...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | ATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTGGGGGCGAGAGGAGTCAGGTGTTTCTaGTGGTGCAATCTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MVIFQGVGCGQLAQLGARGVRCF*WCNLDG Trigger: TCCATCAAGATTGCACCACCAGAAACACCTGACTCC...TCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCCGACCATTCGAACTTTaGAGTCAGGTGTTTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPRPFEL*SQVFLV Trigger: CACCAGAAACACCTGACTCCAAAGTTCGAATGGTCG...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR TCA 90 bp | GAGGTAACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTGCCTGACTCCGCTCGAACTTTCTTCATaGTCTCCTGCTCGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVTSHLEVVYFAQHCLTPLELSS*SPARPC Trigger: GCAGGGCCGAGCAGGAGATCATGAAGAAAGTTCGAG...CGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCTCTAGACGTTTTCCTTaGAGTTCTACTTTCCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPSRRFP*SSTFPE Trigger: CTCGGGGAAAGTAGAACTGCAAGGAAAACGTCTAGA...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCATCCTTTGCCTCCTTGTaGATAATCTCCAAGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPSFASL*IISKII Trigger: GATGATCTTGGAGATTATGCACAAGGAGGCAAAGGA...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTCGTTTTGGTGTCCTTTaGCTCCTTGTGCATAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GWSESTFGPLNSSTEPRLRFGVL*LLVHNL Trigger: GAGATTATGCACAAGGAGGCAAAGGACACCAAAACG...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTTTAGTGTAGTCTCCAGGACCCTCCCCCTCACAGACAGGCCTAGGAGATTCGTCTCTGTGTCCTaGTCCACCTTCTTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVFSVVSRTLPLTDRPRRFVSVS*STFFRF Trigger: GAACCTGAAGAAGGTGGAGCAGGACACAGAGACGAA...TCTCCTAGGCCTGTCTGTGAGGGGGAGGGTCCTGGAGACTACACTAAAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | ATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTGGGGGCGAGAATCTTAACAATGACTTaGTCGTTCTCATCCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: MVIFQGVGCGQLAQLGARILTMT*SFSSGV Trigger: GACCCCGGATGAGAACGACCAAGTCATTGTTAAGAT...TCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | GAGGTAACTTCACACCTTGAGGTAGTTTACTTCGCACAGCACTGCCTGACTCCGCCGAGAAAGTTTCGATaGCCTTCATCGCCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVTSHLEVVYFAQHCLTPPRKFR*PSSPSA Trigger: AGCACTGGGCGATGAAGGCCATCGAAACTTTCTCGG...CGGAGTCAGGCAGTGCTGTGCGAAGTAAACTACCTCAAGGTGTGAAGTTACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| 3UTR CAA 72 bp | ATTGGGGGCGAGAGATCAGGATTCCTCACTGGAACATaGTTCTCAAGACAGTGTGCAAACCTGATCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IGGERSGFLTGT*FSRQCANLISS Trigger: GCTGGAGATCAGGTTTGCACACTGTCTTGAGAACAATGTTCCAGTGAGGAATCCTGATCTCTCGCCCCCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATGGGATGTCCACTGGCTaGTGCTTGGCTGGAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNGMSTG*CLAGAP Trigger: AGGGGCTCCAGCCAAGCAGCAGCCAGTGGACATCCC...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTTGGCTGCTGCTTGGCTaGAGCCCCTGCTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: HHVSAGITLCMSEYKNNIWLLLG*SPCCHG Trigger: CCCGTGGCAGCAGGGGCTCCAGCCAAGCAGCAGCCA...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTGCATTCTCCTTCCTATaGACGTCTATTTTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSQSCCWANPAMSGTLPSAFSFL*TSILDC Trigger: GCAGTCCAAAATAGACGTGCATAGGAAGGAGAATGC...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATCGGGGTCTGGTCTCTTaGCACTACCACCTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNRGLVS*HYHLSC Trigger: GCAGCTGAGGTGGTAGTGCCAAGAGACCAGACCCCG...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR GCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATATAGCGCCTACATACTaGGTAGGCACCAGGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNIAPTY*VGTRSR Trigger: CCGGCTCCTGGTGCCTACGCAGTATGTAGGCGCTAT...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR TCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATTGGCGCCCTTCACAGTaGTGGTCCTCTCAGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNWRPSQ*WSSQGY Trigger: ATAACCCTGAGAGGACCATCACTGTGAAGGGCGCCA...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR GCA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTTTCTTCATGATCTCCTaGTCGGCCCTGCAACAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVFIICDYEKHTLQEHPAFFMIS*SALQQF Trigger: GAACTGTTGCAGGGCCGAGCAGGAGATCATGAAGAA...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 72 bp | CAAATTCTCTTCTTTTGTCAGTCCATAGTCACCCATTaGAGGGCATCCGTAATGATACCACATCAGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QILFFCQSIVTH*RASVMIPHQAV Trigger: CACGGCCTGATGTGGTATCATTACGGATGCCCTCAAATGGGTGACTATGGACTGACAAAAGAAGAGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR GCA 90 bp | CTTTCACAATCTTGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTTGCCTAGTACGTCTATTTTGGACTaGGTCTGTTTTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQSCCWANPAMSGTLPSTSILD*VCFVMF Trigger: AAACATCACAAAACAGACGCAGTCCAAAATAGACGT...ACTAGGCAAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR GCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATGCTGCGGTCAAGTTCTaGAGCTCATTCACCGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNAAVKF*SSFTVL Trigger: CAAAACGGTGAATGAGCTGCAGAACTTGACCGCAGC...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR GCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTCACTACCACCTCAGCTaGGGTCAAGTTCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HHVSAGITLCMSEYKNNIHYHLS*GQVLQL Trigger: GAGCTGCAGAACTTGACCGCAGCTGAGGTGGTAGTG...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| 3UTR CAA 72 bp | ATTCTTACTTTCATTAGGAAGCCAACTTTCACAATCTaGCTGCTGGGCAAATCCAGCCATGAGTGGAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTFIRKPTFTI*LLGKSSHEWNL Trigger: AAGGTTCCACTCATGGCTGGATTTGCCCAGCAGCAAGATTGTGAAAGTTGGCTTCCTAATGAAAGTAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CCA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATCTTCATCTGCCGTTTTaGTGTCCTTTGCCTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNLHLPF*CPLPPC Trigger: ACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAG...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTGTCAGGTGTTTCTGGTaGTGCAATCTTGATGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HHVSAGITLCMSEYKNNIVRCFW*CNLDGG Trigger: GCCTCCATCAAGATTGCACCACCAGAAACACCTGAC...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CCA 90 bp | CACCATGTTTCAGCTGGTATTACTCTATGTATGTCTGAATACAAGAACAACATTCCATCGGAGCTGAGGTaGAATATTGCGGATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: HHVSAGITLCMSEYKNNIPSELR*NIADLY Trigger: ATACAGATCCGCAATATTCCACCTCAGCTCCGATGG...AATGTTGTTCTTGTATTCAGACATACATAGAGTAATACCAGCTGAAACATGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 90 bp | ACATACTGCGTAGGCACCAGGAGCCGGAGAGGGATGTCCACTGGCTaGTGCTTGGCTGGAGCCCCTGCTGCCACGGGCGACCCTTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TYCVGTRSRRGMSTG*CLAGAPAATGDPCR Trigger: CCGGCAAGGGTCGCCCGTGGCAGCAGGGGCTCCAGCCAAGCAGCAGCCAGTGGACATCCCTCTCCGGCTCCTGGTGCCTACGCAGTATGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CAA 90 bp | GGGAAGAGCACACCGGCCCTCCACCCGCCCCTCCAGTTCTGTGTTCCTCCTGCTTCCACTGGCTGCTGCTaGGCTGGAGCCCCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKSTPALHPPLQFCVPPASTGCC*AGAPAA Trigger: GGCAGCAGGGGCTCCAGCCAAGCAGCAGCCAGTGGA...AGCAGGAGGAACACAGAACTGGAGGGGCGGGTGGAGGGCCGGTGTGCTCTTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CAA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCCGAGCCTGGGCCAGGTaGCTCTGTCCCTTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPRAWAR*LCPFWC Trigger: GCACCAGAAGGGACAGAGCAACCTGGCCCAGGCTCG...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GGGAAGAGCACACCGGCCCTCCACCCGCCCCTCCAGTTCTGTGTTCCTCCTGCTCCCATTCTCAGGACCTaGCGTTATCTGCTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GKSTPALHPPLQFCVPPAPILRT*RYLLIR Trigger: CCTGATGAGCAGATAACGCAAGGTCCTGAGAATGGG...AGCAGGAGGAACACAGAACTGGAGGGGCGGGTGGAGGGCCGGTGTGCTCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CAA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTAGGTTCCGCCCTTCCTaGCCAATGAGTCGCCCGACG | + |
|
Preference number: 5 (lower is better) Translates to: GWSESTFGPLNSSTEPRLRFRPS*PMSRPT Trigger: CGTCGGGCGACTCATTGGCAAGGAAGGGCGGAACCT...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GGTCTGGAGCCTATGAGAGACCGTGGCTGTGATGGGGACCAAGTGGTAAGACCCCCGGGGTCTGGTCTCTaGGCACTACCACCTCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLEPMRDRGCDGDQVVRPPGSGL*ALPPQL Trigger: CAGCTGAGGTGGTAGTGCCAAGAGACCAGACCCCGG...GGGTCTTACCACTTGGTCCCCATCACAGCCACGGTCTCTCATAGGCTCCAGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 90 bp | TCATCTTGCACGCGGAGGAGCAGCCTTCAGGGGTTGAATGCACGCTaGTGGCCTTCTCCGCAGCGCCCGCATTCTCCTTCCTATGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: SSCTRRSSLQGLNAR*WPSPQRPHSPSYAR Trigger: ACGTGCATAGGAAGGAGAATGCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGTGCAAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 90 bp | TCCAAGATCATCTTGCACGCGGAGGAGCAGCCTTCAGGGGTTGAATaGACGCTGATGGCCTTCTCCGCAGCGCCCGCATTCTCCTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: SKIILHAEEQPSGVE*TLMAFSAAPAFSFL Trigger: TAGGAAGGAGAATGCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGTGCAAGATGATCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 90 bp | AATCTCCAAGATCATCTTGCACGCGGAGGAGCAGCCTTCAGGGGTTaGATGCACGCTGATGGCCTTCTCCGCAGCGCCCGCATTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLQDHLARGGAAFRG*MHADGLLRSARILL Trigger: AAGGAGAATGCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGTGCAAGATGATCTTGGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS-3UTR CAA 90 bp | ATGGTGATATTCCAAGGGGTGGGCTGTGGCCAGCTGGCTCAATTGGGGGCGAGAATGGTGGCACCCTCCTaGCCAATGATAGCGCCTACA | + |
|
Preference number: 5 (lower is better) Translates to: MVIFQGVGCGQLAQLGARMVAPS*PMIAPT Trigger: TGTAGGCGCTATCATTGGCAAGGAGGGTGCCACCAT...TCTCGCCCCCAATTGAGCCAGCTGGCCACAGCCCACCCCTTGGAATATCACCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTATCTCCAAGATCATCTaGCACGCGGAGGAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GWSESTFGPLNSSTEPRLISKII*HAEEQP Trigger: AGGCTGCTCCTCCGCGTGCAAGATGATCTTGGAGAT...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GAAGCGGGGACCCCGAGCACAGGCAGAGAGGCCTTCCTTTCTTCCCAGCACACTGTGCTGTTGCTTAACTaGAGCCAGGATGTCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EAGTPSTGREAFLSSQHTVLLLN*SQDVSD Trigger: ATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCAC...AGTGTGCTGGGAAGAAAGGAAGGCCTCTCTGCCTGTGCTCGGGGTCCCCGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 90 bp | CTGTGTCCTGCTCCACCTTCTTCAGGTTCCGCCCTTCCTTGCCAATaGGTCGCCCGACGAAGTTGTTATGAGCCAGGATCTTCAGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LCPAPPSSGSALPCQ*VARRSCYEPGSSGE Trigger: TTCCCCTGAAGATCCTGGCTCATAACAACTTCGTCGGGCGACTCATTGGCAAGGAAGGGCGGAACCTGAAGAAGGTGGAGCAGGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 90 bp | TCATGGCGGCCACGTCGTTCTCGTAAGCCTCTCGAACTTTCTTCATaGTCTCCTGCTCGGCCCTGCAACAGTTCTCAATGGCGCCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SWRPRRSRKPLELSS*SPARPCNSSQWRPS Trigger: TGAAGGGCGCCATTGAGAACTGTTGCAGGGCCGAGCAGGAGATCATGAAGAAAGTTCGAGAGGCTTACGAGAACGACGTGGCCGCCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAGTGTCCTTTGCCTCCTaGTGCATAATCTCCAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPVSFAS*CIISKI Trigger: GATCTTGGAGATTATGCACAAGGAGGCAAAGGACAC...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | AGACCCCAGAGGGGGTTAAAGCCACTGCGGTGTAAGCGGCAGATGCAGCTTCAAAGCTCATTCACCGTTTaGCCGCCTTTGCCGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: RPQRGLKPLRCKRQMQLQSSFTV*PPLPMT Trigger: TGTCATCGGCAAAGGCGGCAAAACGGTGAATGAGCT...TTGAAGCTGCATCTGCCGCTTACACCGCAGTGGCTTTAACCCCCTCTGGGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 90 bp | AGGTTCCGCCCTTCCTTGCCAATGAGTCGCCCGACGAAGTTGTTATaGGCCAGGATCTTCAGGGGAACTTCATCTGCCGTTTTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFRPSLPMSRPTKLL*ARIFRGTSSAVLVS Trigger: GGACACCAAAACGGCAGATGAAGTTCCCCTGAAGATCCTGGCTCATAACAACTTCGTCGGGCGACTCATTGGCAAGGAAGGGCGGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | AGACCCCAGAGGGGGTTAAAGCCACTGCGGTGTAAGCGGCAGATGCAGCTTCAAACTTCATCTGCCGTTTaGGTGTCCTTTGCCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RPQRGLKPLRCKRQMQLQTSSAV*VSFASL Trigger: CAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGT...TTGAAGCTGCATCTGCCGCTTACACCGCAGTGGCTTTAACCCCCTCTGGGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GGGTGGAGCGAGAGCACCTTTGGGCCACTCAACTCCTCCACAGAACCGAGACTTACTTTCAGTGTTCACTaGCTCACAGTTCTCCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GWSESTFGPLNSSTEPRLTFSVH*LTVLHC Trigger: ACAGTGGAGAACTGTGAGCAAGTGAACACTGAAAGT...AAGTCTCGGTTCTGTGGAGGAGTTGAGTGGCCCAAAGGTGCTCTCGCTCCACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GTGGTCAACTACAAAGGTGGCCTGAGCGAGCCTGGTAGACTGGACCAGGCCCCAAGCTTTACTTCCTCCTaGGGACCAAAGAAATTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVNYKGGLSEPGRLDQAPSFTSS*GPKKFS Trigger: AGAGAATTTCTTTGGTCCCAAGGAGGAAGTAAAGCT...TGGGGCCTGGTCCAGTCTACCAGGCTCGCTCAGGCCACCTTTGTAGTTGACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 90 bp | TTCAGGGGAACTTCATCTGCCGTTTTGGTGTCCTTTGCCTCCTTGTaGATAATCTCCAAGATCATCTTGCACGCGGAGGAGCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRGTSSAVLVSFASL*IISKIILHAEEQPS Trigger: TGAAGGCTGCTCCTCCGCGTGCAAGATGATCTTGGAGATTATGCACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGTTCCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATTCTGGTGGTGCAATCTaGATGGAGGCGCTGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNSGGAI*MEALAK Trigger: CTTCGCCAGCGCCTCCATCAAGATTGCACCACCAGA...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | GTAGTATTCATCATCTGTGATTATGAAAAACACACGCTCCAGGAGCATCCTGCTGATCTTAACAATGACTaGGTCGTTCTCATCCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VVFIICDYEKHTLQEHPADLNND*VVLIRG Trigger: ACCCCGGATGAGAACGACCAAGTCATTGTTAAGATC...AGCAGGATGCTCCTGGAGCGTGTGTTTTTCATAATCACAGATGATGAATACTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS-3UTR CAA 90 bp | TGGAGAACTTCAAGACAATCCACGTTTAAAAGCAACCCAAGCTATGATTGCAATACGACCATTCGAACTTaGGAGTCAGGTGTTTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: WRTSRQSTFKSNPSYDCNTTIRT*ESGVSG Trigger: ACCAGAAACACCTGACTCCAAAGTTCGAATGGTCGT...ATTGCAATCATAGCTTGGGTTGCTTTTAAACGTGGATTGTCTTGAAGTTCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 72 bp | GGCACCAGGAGCCGGAGAGGGATGTCCACTGGCTGCTaGTTGGCTGGAGCCCCTGCTGCCACGGGCGACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTRSRRGMSTGC*LAGAPAATGDP Trigger: AGGGTCGCCCGTGGCAGCAGGGGCTCCAGCCAAGCAGCAGCCAGTGGACATCCCTCTCCGGCTCCTGGTGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CCA 72 bp | CTGCGTAGGCACCAGGAGCCGGAGAGGGATGTCCACTaGCTGCTGCTTGGCTGGAGCCCCTGCTGCCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRRHQEPERDVH*LLLGWSPCCHG Trigger: CCCGTGGCAGCAGGGGCTCCAGCCAAGCAGCAGCCAGTGGACATCCCTCTCCGGCTCCTGGTGCCTACGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 72 bp | ACGCGGAGGAGCAGCCTTCAGGGGTTGAATGCACGCTaGTGGCCTTCTCCGCAGCGCCCGCATTCTCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TRRSSLQGLNAR*WPSPQRPHSPS Trigger: GGAAGGAGAATGCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 72 bp | GATCATCTTGCACGCGGAGGAGCAGCCTTCAGGGGTTaGATGCACGCTGATGGCCTTCTCCGCAGCGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: DHLARGGAAFRG*MHADGLLRSAR Trigger: GCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGTGCAAGATGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 72 bp | ATCTTGCACGCGGAGGAGCAGCCTTCAGGGGTTGAATaGACGCTGATGGCCTTCTCCGCAGCGCCCGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: ILHAEEQPSGVE*TLMAFSAAPAF Trigger: GAATGCGGGCGCTGCGGAGAAGGCCATCAGCGTGCATTCAACCCCTGAAGGCTGCTCCTCCGCGTGCAAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS GCA 72 bp | GTGGCACCCTCCTTGCCAATGATAGCGCCTACATACTaGGTAGGCACCAGGAGCCGGAGAGGGATGTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: VAPSLPMIAPTY*VGTRSRRGMST Trigger: AGTGGACATCCCTCTCCGGCTCCTGGTGCCTACGCAGTATGTAGGCGCTATCATTGGCAAGGAGGGTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 90 bp | AGCCTGGGCCAGGTTGCTCTGTCCCTTCTGGTGCTGTTGCTTAACTaGAGCCAGGATGTCTCGGATCTTCCGCTGAGCCATCTGGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGQVALSLLVLLLN*SQDVSDLPLSHLAG Trigger: GCCAGCCAGATGGCTCAGCGGAAGATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCACCAGAAGGGACAGAGCAACCTGGCCCAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS CAA 90 bp | CTGGCCCCGAGACCCAAAGCCTCCACGACGCCCATTCTCAGGACCTaGCGTTATCTGCTCATCAGGTATGTAGGAGACCTTCAGGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LAPRPKASTTPILRT*RYLLIRYVGDLQGM Trigger: CATGCCCTGAAGGTCTCCTACATACCTGATGAGCAGATAACGCAAGGTCCTGAGAATGGGCGTCGTGGAGGCTTTGGGTCTCGGGGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS CAA 90 bp | CTTCCTCCGAGCCTGGGCCAGGTTGCTCTGTCCCTTCTGGTGCTGTaGCTTAACTTGAGCCAGGATGTCTCGGATCTTCCGCTGAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LPPSLGQVALSLLVL*LNLSQDVSDLPLSH Trigger: ATGGCTCAGCGGAAGATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCACCAGAAGGGACAGAGCAACCTGGCCCAGGCTCGGAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS CAA 72 bp | AGCCTGGGCCAGGTTGCTCTGTCCCTTCTGGTGCTGTaGCTTAACTTGAGCCAGGATGTCTCGGATCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLGQVALSLLVL*LNLSQDVSDLP Trigger: CGGAAGATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCACCAGAAGGGACAGAGCAACCTGGCCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS TCA 72 bp | GCTCCACCTTCTTCAGGTTCCGCCCTTCCTTGCCAATaGGTCGCCCGACGAAGTTGTTATGAGCCAGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: APPSSGSALPCQ*VARRSCYEPGS Trigger: AGATCCTGGCTCATAACAACTTCGTCGGGCGACTCATTGGCAAGGAAGGGCGGAACCTGAAGAAGGTGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS CCA 72 bp | AATGACTTGGTCGTTCTCATCCGGGGTCTGGTCTCTTaGCACTACCACCTCAGCTGCGGTCAAGTTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NDLVVLIRGLVS*HYHLSCGQVLQ Trigger: CTGCAGAACTTGACCGCAGCTGAGGTGGTAGTGCCAAGAGACCAGACCCCGGATGAGAACGACCAAGTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
||
| CDS CCA 72 bp | TTCCTTGCAGTTCTACTTTCCCCGAGAAAGTTTCGATaGCCTTCATCGCCCAGTGCTCGTCGGGGCAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: FLAVLLSPRKFR*PSSPSARRGNP Trigger: TGGATTGCCCCGACGAGCACTGGGCGATGAAGGCCATCGAAACTTTCTCGGGGAAAGTAGAACTGCAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CCA 72 bp | GATGACGACCATTCGAACTTTGGAGTCAGGTGTTTCTaGTGGTGCAATCTTGATGGAGGCGCTGGCGAAGCG | + |
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Preference number: 6 (lower is better) Translates to: DDDHSNFGVRCF*WCNLDGGAGEA Trigger: CGCTTCGCCAGCGCCTCCATCAAGATTGCACCACCAGAAACACCTGACTCCAAAGTTCGAATGGTCGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 72 bp | CAGGTTGCTCTGTCCCTTCTGGTGCTGTTGCTTAACTaGAGCCAGGATGTCTCGGATCTTCCGCTGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: QVALSLLVLLLN*SQDVSDLPLSH Trigger: ATGGCTCAGCGGAAGATCCGAGACATCCTGGCTCAAGTTAAGCAACAGCACCAGAAGGGACAGAGCAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 72 bp | CCTTCCTTGCCAATGAGTCGCCCGACGAAGTTGTTATaGGCCAGGATCTTCAGGGGAACTTCATCTGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: PSLPMSRPTKLL*ARIFRGTSSAV Trigger: AACGGCAGATGAAGTTCCCCTGAAGATCCTGGCTCATAACAACTTCGTCGGGCGACTCATTGGCAAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS TCA 72 bp | CCACGTCGTTCTCGTAAGCCTCTCGAACTTTCTTCATaGTCTCCTGCTCGGCCCTGCAACAGTTCTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: PRRSRKPLELSS*SPARPCNSSQW Trigger: CCATTGAGAACTGTTGCAGGGCCGAGCAGGAGATCATGAAGAAAGTTCGAGAGGCTTACGAGAACGACGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CCA 72 bp | ATCTTAACAATGACTTGGTCGTTCTCATCCGGGGTCTaGTCTCTTGGCACTACCACCTCAGCTGCGGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: ILTMTWSFSSGV*SLGTTTSAAVK Trigger: CTTGACCGCAGCTGAGGTGGTAGTGCCAAGAGACCAGACCCCGGATGAGAACGACCAAGTCATTGTTAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 72 bp | AGACCCAAAGCCTCCACGACGCCCATTCTCAGGACCTaGCGTTATCTGCTCATCAGGTATGTAGGAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: RPKASTTPILRT*RYLLIRYVGDL Trigger: AAGGTCTCCTACATACCTGATGAGCAGATAACGCAAGGTCCTGAGAATGGGCGTCGTGGAGGCTTTGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 90 bp | ATCTTCAGGGGAACTTCATCTGCCGTTTTGGTGTCCTTTGCCTCCTaGTGCATAATCTCCAAGATCATCTTGCACGCGGAGGAGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: IFRGTSSAVLVSFAS*CIISKIILHAEEQP Trigger: AGGCTGCTCCTCCGCGTGCAAGATGATCTTGGAGATTATGCACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGTTCCCCTGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 90 bp | AGCCATCTGGCTGGCATAGAAATGTCCGATGATCTTAACAATGACTaGGTCGTTCTCATCCGGGGTCTGGTCTCTTGGCACTACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: SHLAGIEMSDDLNND*VVLIRGLVSWHYHL Trigger: GAGGTGGTAGTGCCAAGAGACCAGACCCCGGATGAGAACGACCAAGTCATTGTTAAGATCATCGGACATTTCTATGCCAGCCAGATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 72 bp | ACTTCATCTGCCGTTTTGGTGTCCTTTGCCTCCTTGTaGATAATCTCCAAGATCATCTTGCACGCGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: TSSAVLVSFASL*IISKIILHAEE Trigger: CTCCTCCGCGTGCAAGATGATCTTGGAGATTATGCACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 72 bp | GGAACTTCATCTGCCGTTTTGGTGTCCTTTGCCTCCTaGTGCATAATCTCCAAGATCATCTTGCACGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: GTSSAVLVSFAS*CIISKIILHAE Trigger: CTCCGCGTGCAAGATGATCTTGGAGATTATGCACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS CAA 72 bp | GCTGGCATAGAAATGTCCGATGATCTTAACAATGACTaGGTCGTTCTCATCCGGGGTCTGGTCTCTTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: AGIEMSDDLNND*VVLIRGLVSWH Trigger: GTGCCAAGAGACCAGACCCCGGATGAGAACGACCAAGTCATTGTTAAGATCATCGGACATTTCTATGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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| CDS GCA 72 bp | CTTCAGGGGAACTTCATCTGCCGTTTTGGTGTCCTTTaGCTCCTTGTGCATAATCTCCAAGATCATCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: LQGNFICRFGVL*LLVHNLQDHLA Trigger: TGCAAGATGATCTTGGAGATTATGCACAAGGAGGCAAAGGACACCAAAACGGCAGATGAAGTTCCCCTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013559.3 |
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