RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGF1R (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005533

Ensembl transcript IDs: ENSMUST00000005671.10

Found 357 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCAAGAGGAACCAATGCCAGGAGAGCAATGGTGGCATGCCCCTaGCTCGGTGCAGGTCTCAGAGGAGCAGCTGAGGGGGCTGACAGG +
Preference number: 1 (lower is better)
Translates to: PPRGTNARRAMVACP*LGAGLRGAAEGADR
Trigger: CCTGTCAGCCCCCTCAGCTGCTCCTCTGAGACCTGCACCGAGGCAGGGGCATGCCACCATTGCTCTCCTGGCATTGGTTCCTCTTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp AGTGTGACCTTGCCACCACTGCTTGCTTACCTCAGGCACAGGCACTaGCAAAAGAGGTGGGCTGCTAAGGCCGAGGCTCCGGGAGCTCAG +
Preference number: 1 (lower is better)
Translates to: SVTLPPLLAYLRHRH*QKRWAAKAEAPGAQ
Trigger: CTGAGCTCCCGGAGCCTCGGCCTTAGCAGCCCACCTCTTTTGGCAGTGCCTGTGCCTGAGGTAAGCAAGCAGTGGTGGCAAGGTCACACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp GGTGCAGGTCTCAGAGGAGCAGCTGAGGGGGCTGACAGGGCACCCTaGCATGTGCACACATTGGGACTCTCAAGACAACCTACGTGTGGG +
Preference number: 1 (lower is better)
Translates to: GAGLRGAAEGADRAP*HVHTLGLSRQPTCG
Trigger: CCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCTCAGCTGCTCCTCTGAGACCTGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp CCTGTAAGAGCAGCTGCTGGAGTTGAGGATTGCACTGTCCACCTGTaGGCAGCAGACGGATGGGTGGACAGAGGCAGAGCACGGGGAAGG +
Preference number: 1 (lower is better)
Translates to: PVRAAAGVEDCTVHL*AADGWVDRGRARGR
Trigger: CCTTCCCCGTGCTCTGCCTCTGTCCACCCATCCGTCTGCTGCTCACAGGTGGACAGTGCAATCCTCAACTCCAGCAGCTGCTCTTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp TCCCCAGCTGAAGTCCCCAGGGCCTGTAAGAGCAGCTGCTGGAGTTaGGGATTGCACTGTCCACCTGTGAGCAGCAGACGGATGGGTGGA +
Preference number: 1 (lower is better)
Translates to: SPAEVPRACKSSCWS*GLHCPPVSSRRMGG
Trigger: TCCACCCATCCGTCTGCTGCTCACAGGTGGACAGTGCAATCCTCAACTCCAGCAGCTGCTCTTACAGGCCCTGGGGACTTCAGCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp GTCTCAGAGGAGCAGCTGAGGGGGCTGACAGGGCACCCTGACATGTaGACACATTGGGACTCTCAAGACAACCTACGTGTGGGTGCCTCC +
Preference number: 1 (lower is better)
Translates to: VSEEQLRGLTGHPDM*THWDSQDNLRVGAS
Trigger: GGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCTCAGCTGCTCCTCTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp GAGCAGCTGAGGGGGCTGACAGGGCACCCTGACATGTGCACACATTaGGACTCTCAAGACAACCTACGTGTGGGTGCCTCCTGCCCTCAA +
Preference number: 1 (lower is better)
Translates to: EQLRGLTGHPDMCTH*DSQDNLRVGASCPQ
Trigger: TTGAGGGCAGGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCTCAGCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp CCAGCTCAGGTTCAGCTCTATCTCCACGCCTCAGGAAGGGCTGTGTaGGGGCACACCTGGATGTTCACGTCACCTGCATGCTGTGCCTCA +
Preference number: 1 (lower is better)
Translates to: PAQVQLYLHASGRAV*GHTWMFTSPACCAS
Trigger: TGAGGCACAGCATGCAGGTGACGTGAACATCCAGGTGTGCCCCCACACAGCCCTTCCTGAGGCGTGGAGATAGAGCTGAACCTGAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp CAGAATCCAGCCTGGCCCCTCTCTGCTTCACCTGGGTATGTGGCCTaGGGAGTGGCTGAGGTTACCAGGATCATTGGCCTACTGTCAGGT +
Preference number: 1 (lower is better)
Translates to: QNPAWPLSASPGYVA*GVAEVTRIIGLLSG
Trigger: ACCTGACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGCAGAGAGGGGCCAGGCTGGATTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp CAGCCTGGCCCCTCTCTGCTTCACCTGGGTATGTGGCCTGCGGAGTaGCTGAGGTTACCAGGATCATTGGCCTACTGTCAGGTACTGAGA +
Preference number: 1 (lower is better)
Translates to: QPGPSLLHLGMWPAE*LRLPGSLAYCQVLR
Trigger: TCTCAGTACCTGACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGCAGAGAGGGGCCAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp AACCCCAGAATCCAGCCTGGCCCCTCTCTGCTTCACCTGGGTATGTaGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCCTACTGT +
Preference number: 1 (lower is better)
Translates to: NPRIQPGPSLLHLGM*PAEWLRLPGSLAYC
Trigger: ACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGCAGAGAGGGGCCAGGCTGGATTCTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp GCCTTGGGTAAGCATCCTAGACTCCTCACCCACATGAGCTCAGTGTaGCCTTGCCACCACTGCTTGCTTACCTCAGGCACAGGCACTGCC +
Preference number: 1 (lower is better)
Translates to: ALGKHPRLLTHMSSV*PCHHCLLTSGTGTA
Trigger: GGCAGTGCCTGTGCCTGAGGTAAGCAAGCAGTGGTGGCAAGGTCACACTGAGCTCATGTGGGTGAGGAGTCTAGGATGCTTACCCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp CTGCTTGTGAAGGAGGTGGCAGATGGGCCACTGGACCAGCTCTGCTaGATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: LLVKEVADGPLDQLC*ILGTQQLLCVCVCV
Trigger: CACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGAGCTGGTCCAGTGGCCCATCTGCCACCTCCTTCACAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp GGAAGGGCTGTGTGGGGGCACACCTGGATGTTCACGTCACCTGCATaGTGTGCCTCAGTGGTTCATGTGACTTCAAGCAGTGTGAGCTCC +
Preference number: 1 (lower is better)
Translates to: GRAVWGHTWMFTSPA*CASVVHVTSSSVSS
Trigger: GGAGCTCACACTGCTTGAAGTCACATGAACCACTGAGGCACAGCATGCAGGTGACGTGAACATCCAGGTGTGCCCCCACACAGCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp ATGCAACGAGACCCAGGAGATGTGGGCTGGGAGAGCCGGGCACAGTaGGGGGCCTCAGCACGTGTCTCTCAAATGTTATCATCAACCAGA +
Preference number: 1 (lower is better)
Translates to: MQRDPGDVGWESRAQ*GASARVSQMLSSTR
Trigger: TCTGGTTGATGATAACATTTGAGAGACACGTGCTGAGGCCCCCCACTGTGCCCGGCTCTCCCAGCCCACATCTCCTGGGTCTCGTTGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp GACAACAGAGGGCCTTGGGTAAGCATCCTAGACTCCTCACCCACATaGGCTCAGTGTGACCTTGCCACCACTGCTTGCTTACCTCAGGCA +
Preference number: 1 (lower is better)
Translates to: DNRGPWVSILDSSPT*AQCDLATTACLPQA
Trigger: TGCCTGAGGTAAGCAAGCAGTGGTGGCAAGGTCACACTGAGCTCATGTGGGTGAGGAGTCTAGGATGCTTACCCAAGGCCCTCTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp GGCTGTGTGGGGGCACACCTGGATGTTCACGTCACCTGCATGCTGTaGCTCAGTGGTTCATGTGACTTCAAGCAGTGTGAGCTCCTATCA +
Preference number: 1 (lower is better)
Translates to: GCVGAHLDVHVTCML*LSGSCDFKQCELLS
Trigger: TGATAGGAGCTCACACTGCTTGAAGTCACATGAACCACTGAGGCACAGCATGCAGGTGACGTGAACATCCAGGTGTGCCCCCACACAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp TCTGAATCCAATGTTAGGACATTCCTGAAAGGAGATGGCGAAGCGTaGGCCCCACCCAGCTCAGGTTCAGCTCTATCTCCACGCCTCAGG +
Preference number: 1 (lower is better)
Translates to: SESNVRTFLKGDGEA*APPSSGSALSPRLR
Trigger: CCTGAGGCGTGGAGATAGAGCTGAACCTGAGCTGGGTGGGGCCCACGCTTCGCCATCTCCTTTCAGGAATGTCCTAACATTGGATTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp AGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGATATaGTGCCTTGCAATAGTCGGGGCGCGTCAGTCCAGCAGAACGACT +
Preference number: 1 (lower is better)
Translates to: RGGEHQHEIRLELWI*CLAIVGARQSSRTT
Trigger: AGTCGTTCTGCTGGACTGACGCGCCCCGACTATTGCAAGGCATCATATCCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp GGACCAGCCATACCAGCCAGATGTCACCATGGAGTGCCATCTCTTTaGTGGGTGGCCACACACTGCTATTTCCATGGCCAGCAGTTCTTT +
Preference number: 1 (lower is better)
Translates to: GPAIPARCHHGVPSL*WVATHCYFHGQQFF
Trigger: AAAGAACTGCTGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCTGGTATGGCTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp TCCTGGATGCCAGTGTTTAGGAAAGGAGATGCTTTCAGCACTCTGTaGCCACTCTCAGAGGACCCAACGATGACAACAGAGGGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: SWMPVFRKGDAFSTL*PLSEDPTMTTEGLG
Trigger: CCCAAGGCCCTCTGTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCTTTCCTAAACACTGGCATCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp CCAGCCATACCAGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTaGGTGGCCACACACTGCTATTTCCATGGCCAGCAGTTCTTTCCA +
Preference number: 1 (lower is better)
Translates to: PAIPARCHHGVPSLC*VATHCYFHGQQFFP
Trigger: TGGAAAGAACTGCTGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCTGGTATGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp GGCCTCAGCACGTGTCTCTCAAATGTTATCATCAACCAGACACCATaGTTCATCCCACGCCTCTGGACAAAGGGAAATCAGCGCAGGGAG +
Preference number: 1 (lower is better)
Translates to: GLSTCLSNVIINQTP*FIPRLWTKGNQRRE
Trigger: CTCCCTGCGCTGATTTCCCTTTGTCCAGAGGCGTGGGATGAACCATGGTGTCTGGTTGATGATAACATTTGAGAGACACGTGCTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp AGGGGTTGTCACCAGGCAGGCACCTACTCCACCTGTACATGTGTCTaGACACTGCCCAACACCCACAAGAAACTGAAAGACCAAACCAAA +
Preference number: 1 (lower is better)
Translates to: RGCHQAGTYSTCTCV*TLPNTHKKLKDQTK
Trigger: TTTGGTTTGGTCTTTCAGTTTCTTGTGGGTGTTGGGCAGTGTGCAGACACATGTACAGGTGGAGTAGGTGCCTGCCTGGTGACAACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp TGCACACATTGGGACTCTCAAGACAACCTACGTGTGGGTGCCTCCTaGCCTCAAAACCTGGGAGTACCTGCTCTCTTAGGGATAGAATTT +
Preference number: 1 (lower is better)
Translates to: CTHWDSQDNLRVGAS*PQNLGVPALLGIEF
Trigger: AAATTCTATCCCTAAGAGAGCAGGTACTCCCAGGTTTTGAGGGCAGGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp AATGGGCCAAAGCATTTTGATGGAGTGGTCCTGTCTCCTCCTGGATaGCAGTGTTTAGGAAAGGAGATGCTTTCAGCACTCTGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: NGPKHFDGVVLSPPG*QCLGKEMLSALCGH
Trigger: GTGGCCACAGAGTGCTGAAAGCATCTCCTTTCCTAAACACTGGCATCCAGGAGGAGACAGGACCACTCCATCAAAATGCTTTGGCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp TCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCTaGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAAGGTCTGTATC +
Preference number: 1 (lower is better)
Translates to: SRNVRFSKSPTGHPS*KPKAKTPGLSKVCI
Trigger: GATACAGACCTTGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp ACTAAACCAGGATGTGTGGGATTTTTAACCTTTTTGTTTCTGACCTaGGTTTGTGGCATGCCTTGCCCTGGAGCAGATGCTGTGTGCGGG +
Preference number: 1 (lower is better)
Translates to: TKPGCVGFLTFLFLT*VCGMPCPGADAVCG
Trigger: CCCGCACACAGCATCTGCTCCAGGGCAAGGCATGCCACAAACTCAGGTCAGAAACAAAAAGGTTAAAAATCCCACACATCCTGGTTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp ACAACTCATCTGATGAGTGTGATGGAGTCTGAGTCCTTCCGCACGTaGCTTAGCTCTAAGGAGAAGTTTCCAGAGCAGGATGCCAAGTGT +
Preference number: 1 (lower is better)
Translates to: TTHLMSVMESESFRT*LSSKEKFPEQDAKC
Trigger: ACACTTGGCATCCTGCTCTGGAAACTTCTCCTTAGAGCTAAGTCACGTGCGGAAGGACTCAGACTCCATCACACTCATCAGATGAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp TCAAATGTTATCATCAACCAGACACCATGGTTCATCCCACGCCTCTaGACAAAGGGAAATCAGCGCAGGGAGTATATGCGTGTGAGAAAA +
Preference number: 1 (lower is better)
Translates to: SNVIINQTPWFIPRL*TKGNQRREYMRVRK
Trigger: TTTTCTCACACGCATATACTCCCTGCGCTGATTTCCCTTTGTCCAGAGGCGTGGGATGAACCATGGTGTCTGGTTGATGATAACATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp AGCAAAGACCCCTGGCCTGTCCAAGGTCTGTATCTTCAGCATCTCTaGCAAGAGAGGTTCAATTTTACACAGACATCCTGTCTTGAAGTT +
Preference number: 1 (lower is better)
Translates to: SKDPWPVQGLYLQHL*QERFNFTQTSCLEV
Trigger: AACTTCAAGACAGGATGTCTGTGTAAAATTGAACCTCTCTTGCCAGAGATGCTGAAGATACAGACCTTGGACAGGCCAGGGGTCTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp AAGCTTGTAAAGAGAAAAATCAGGAAGAGGCGGGGAACATCAGCATaGGATCAGGCTAGAACTGTGGATATGATGCCTTGCAATAGTCGG +
Preference number: 1 (lower is better)
Translates to: KLVKRKIRKRRGTSA*DQARTVDMMPCNSR
Trigger: CCGACTATTGCAAGGCATCATATCCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTCTCTTTACAAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp TCCCAAACCGTAAATTCATTACTGCTAAAATGGGCCAAAGCATTTTaGTGGAGTGGTCCTGTCTCCTCCTGGATGCCAGTGTTTAGGAAA +
Preference number: 1 (lower is better)
Translates to: SQTVNSLLLKWAKAF*WSGPVSSWMPVFRK
Trigger: TTTCCTAAACACTGGCATCCAGGAGGAGACAGGACCACTCCATCAAAATGCTTTGGCCCATTTTAGCAGTAATGAATTTACGGTTTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp TCTCATTTGTACCACCACCTAGTTCAAAGTGGACTGTTAAAAGTTTaGCCATCATCACTGGTTCTTAAGGGGTGGATCTCTCTGGTCCAG +
Preference number: 1 (lower is better)
Translates to: SHLYHHLVQSGLLKV*PSSLVLKGWISLVQ
Trigger: CTGGACCAGAGAGATCCACCCCTTAAGAACCAGTGATGATGGTCAAACTTTTAACAGTCCACTTTGAACTAGGTGGTGGTACAAATGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp ATGAAGTTCTCACAGAAACCAAAATCAAATCAATCCCTAACGTCATaGCCCAGACCGACAACTCATCTGATGAGTGTGATGGAGTCTGAG +
Preference number: 1 (lower is better)
Translates to: MKFSQKPKSNQSLTS*PRPTTHLMSVMESE
Trigger: CTCAGACTCCATCACACTCATCAGATGAGTTGTCGGTCTGGGGCATGACGTTAGGGATTGATTTGATTTTGGTTTCTGTGAGAACTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 90 bp TTCCATGTGTTTTCAACAACGGTATCTTGTGGAACCAGAGAGACATaGCCAATAATGCACGGGGAGCCAAAGGACATGGATCTTAATTTG +
Preference number: 1 (lower is better)
Translates to: FHVFSTTVSCGTRET*PIMHGEPKDMDLNL
Trigger: CAAATTAAGATCCATGTCCTTTGGCTCCCCGTGCATTATTGGCCATGTCTCTCTGGTTCCACAAGATACCGTTGTTGAAAACACATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 90 bp GTGTATGCAAATGTTTCACGGTCTAACATAGAACTGAGAGACCCATaGAGAAGTCCTAGTAACAGACCATGTGAAAGCTCACACTGCTTG +
Preference number: 1 (lower is better)
Translates to: VYANVSRSNIELRDP*RSPSNRPCESSHCL
Trigger: CAAGCAGTGTGAGCTTTCACATGGTCTGTTACTAGGACTTCTTCATGGGTCTCTCAGTTCTATGTTAGACCGTGAAACATTTGCATACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 90 bp CAATTCTCGAGTGTCCTGTTGCTATTAAGTGTTGTCATTAAGGTTTaGAGAGGCCCATGTCAGTTAAGGGTTCGGGTAAAGGAAATAAAA +
Preference number: 1 (lower is better)
Translates to: QFSSVLLLLSVVIKV*RGPCQLRVRVKEIK
Trigger: TTTTATTTCCTTTACCCGAACCCTTAACTGACATGGGCCTCTGCAAACCTTAATGACAACACTTAATAGCAACAGGACACTCGAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGCAGCAATGGCAGGTCTaGAGATCCACTGAGGTACAG +
Preference number: 2 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLQQWQV*RSTEVQ
Trigger: CTGTACCTCAGTGGATCTTCAGACCTGCCATTGCTG...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAATGCCCCTGCCTCGGTaGAGGTCTCAGAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPMPLPR*RSQRSS
Trigger: GCTGCTCCTCTGAGACCTGCACCGAGGCAGGGGCAT...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTCCAGGAGATGTGGGCTaGGAGAGCCGGGCACAGTGG +
Preference number: 2 (lower is better)
Translates to: SLPRTSITNSQAESPEPFPGDVG*ESRAQW
Trigger: CCACTGTGCCCGGCTCTCCCAGCCCACATCTCCTGG...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCACCTGGGTATGTGGCCTaGGGAGTGGCTGAGGTTACC +
Preference number: 2 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPPGYVA*GVAEVT
Trigger: GGTAACCTCAGCCACTCCGCAGGCCACATACCCAGG...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACAGCAGACGGATGGGTaGACAGAGGCAGAGCACGGG +
Preference number: 2 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRQQTDG*TEAEHG
Trigger: CCCGTGCTCTGCCTCTGTCCACCCATCCGTCTGCTG...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGGAGATGGCGAAGCGTaGGCCCCACCCAGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSGDGEA*APPSSG
Trigger: ACCTGAGCTGGGTGGGGCCCACGCTTCGCCATCTCC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 90 bp GGGATTTCCGGCCCGGGAGTGGGCTTTATAGCACACCCACTAAAGTaGCTGCTCCTGGCCATGGGGAGTTGGTGTCTTACATCTTGCTCC +
Preference number: 2 (lower is better)
Translates to: GISGPGVGFIAHPLK*LLLAMGSWCLTSCS
Trigger: GGAGCAAGATGTAAGACACCAACTCCCCATGGCCAGGAGCAGCAACTTTAGTGGGTGTGCTATAAAGCCCACTCCCGGGCCGGAAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGAAGCCTGGCCCCTCTCTaGTTCACCTGGGTATGTGGC +
Preference number: 2 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRSLAPL*FTWVCG
Trigger: GCCACATACCCAGGTGAAGCAGAGAGGGGCCAGGCT...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCTTCATCCCACGCCTCTaGACAAAGGGAAATCAGCGC +
Preference number: 2 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGFIPRL*TKGNQR
Trigger: GCGCTGATTTCCCTTTGTCCAGAGGCGTGGGATGAA...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTATCAGGAAGGGCTGTGTaGGGGCACACCTGGATGTTC +
Preference number: 2 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLSGRAV*GHTWMF
Trigger: GAACATCCAGGTGTGCCCCCACACAGCCCTTCCTGA...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACTCCCAGTGACCCTGTaGGCATCTAGGAACCCAGAG +
Preference number: 2 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRLPVTL*ASRNPE
Trigger: CTCTGGGTTCCTAGATGCTCACAGGGTCACTGGGAG...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACGGAAGGACAGCAGCCTaGAGGGGGCACAGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: VREDRPLSQSVTYSVEENGRTAA*RGHRLR
Trigger: ACGAAGCCTGTGCCCCCTGCAGGCTGCTGTCCTTCC...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AGGAGATGCTTTCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATGACAACATTCCTGAAAGGAGATaGCGAAGCGTGGGCCCCACC +
Preference number: 2 (lower is better)
Translates to: RRCFQHSVATLRGPNDDNIPERR*RSVGPT
Trigger: GGTGGGGCCCACGCTTCGCCATCTCCTTTCAGGAAT...GTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 90 bp AGGACCAGCCATACCAGCCAGATGTCACCATGGAGTGCCATCTCTTaGCTGGGTGGCCACACACTGCTATTTCCATGGCCAGCAGTTCTT +
Preference number: 2 (lower is better)
Translates to: RTSHTSQMSPWSAIS*LGGHTLLFPWPAVL
Trigger: AAGAACTGCTGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCTGGTATGGCTGGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACTCCAAGAGGAACCAATaGCAGGAGAGCAATGGTGGC +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHSKRNQ*QESNGG
Trigger: GCCACCATTGCTCTCCTGGCATTGGTTCCTCTTGGA...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACGATGTTCACGTCACCTaGATGCTGTGCCTCAGTGGT +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHDVHVT*MLCLSG
Trigger: ACCACTGAGGCACAGCATGCAGGTGACGTGAACATC...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCGAGACCCAGGAGATGTaGGCTGGGAGAGCCGGGCAC +
Preference number: 2 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSETQEM*AGRAGH
Trigger: GTGCCCGGCTCTCCCAGCCCACATCTCCTGGGTCTC...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGATCTGACCTGAGTTTGTaGCATGCCTTGCCCTGGAGC +
Preference number: 2 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRSDLSL*HALPWS
Trigger: GCTCCAGGGCAAGGCATGCCACAAACTCAGGTCAGA...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACAGCTCTGCTGCATCCTaGGGACTCAGCAGCTATTGT +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHSSAAS*GLSSYC
Trigger: ACAATAGCTGCTGAGTCCCCAGGATGCAGCAGAGCT...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAGCAGTTTCTCCATACTaGGGGAAAAGATTAGCCACC +
Preference number: 2 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPAVSPY*GKRLAT
Trigger: GGTGGCTAATCTTTTCCCCCAGTATGGAGAAACTGC...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGGCTGACAGGGCACCCTaGCATGTGCACACATTGGGA +
Preference number: 2 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWADRAP*HVHTLG
Trigger: TCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGC...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp AGGAGATGCTTTCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATGACAACCGGGGAACATCAGCATaGGATCAGGCTAGAACTGTG +
Preference number: 2 (lower is better)
Translates to: RRCFQHSVATLRGPNDDNRGTSA*DQARTV
Trigger: CACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCG...GTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAACCTGACCTTCAAGCTTaGCCATGGCCACTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEPDLQA*PWPLPP
Trigger: TGGAGGAAGTGGCCATGGGCAAGCTTGAAGGTCAGG...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCACCTAGAAGCATCAGTTaGCGGAGAAGAGGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPPRSIS*RRRGRK
Trigger: TTTTCTTCCTCTTCTCCGGCAACTGATGCTTCTAGG...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGTTTGTGGCATGCCTTaGCCTGGAGCAGATGCTGTG +
Preference number: 2 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSVCGMP*PGADAV
Trigger: CACAGCATCTGCTCCAGGGCAAGGCATGCCACAAAC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATCCACTGGACCAGCTCTaGTGCATCCTGGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDPLDQL*CILGTQ
Trigger: CTGAGTCCCCAGGATGCAGCAGAGCTGGTCCAGTGG...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACTTCACGTCACCTGCATaGTGTGCCTCAGTGGTTCAT +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHFTSPA*CASVVH
Trigger: ATGAACCACTGAGGCACAGCATGCAGGTGACGTGAA...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTTTAGAGGGTAATGAATaGGGCTGCAGGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSLEGNE*GCREQG
Trigger: CCCCTGCTCCCTGCAGCCCCATTCATTACCCTCTAA...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAGTAGAAATCCAGTTGTaGAAAACCGGCAGGTATGTG +
Preference number: 2 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPVEIQL*KTGRYV
Trigger: CACATACCTGCCGGTTTTCCACAACTGGATTTCTAC...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACGGTCCTGTCTCCTCCTaGATGCCAGTGTTTAGGAAA +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHGPVSS*MPVFRK
Trigger: TTTCCTAAACACTGGCATCCAGGAGGAGACAGGACC...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACTGGTTCTTAAGGGGTaGATCTCTCTGGTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRLVLKG*ISLVQV
Trigger: GACCTGGACCAGAGAGATCCACCCCTTAAGAACCAG...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 90 bp CAGAGCAGGATGCCAAGTGTCTTATCTGAAACCAAATGCCCACAGTaGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACCATC +
Preference number: 2 (lower is better)
Translates to: QSRMPSVLSETKCPQ*TPQPPHALTPSDTI
Trigger: GATGGTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTTTCAGATAAGACACTTGGCATCCTGCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTTCCTCCAGAATTCTTaGGGTGCTGTGGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: VREDRPLSQSVTYSVEENFLQNS*GAVGGG
Trigger: TCCCCCACCCACAGCACCCCAAGAATTCTGGAGGAA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACGAACTGAGAGACCCATaGAGAAGTCCTAGTAACAGA +
Preference number: 2 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHELRDP*RSPSNR
Trigger: TCTGTTACTAGGACTTCTTCATGGGTCTCTCAGTTC...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTATTTTTGTTTCTGACCTaGGTTTGTGGCATGCCTTGC +
Preference number: 2 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLFLFLT*VCGMPC
Trigger: GCAAGGCATGCCACAAACTCAGGTCAGAAACAAAAA...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATAGCAGCTGCTGGAGTTaGGGATTGCACTGTCCACCT +
Preference number: 2 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDSSCWS*GLHCPP
Trigger: AGGTGGACAGTGCAATCCTCAACTCCAGCAGCTGCT...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACGGGCACCCTGACATGTaGACACATTGGGACTCTCAA +
Preference number: 2 (lower is better)
Translates to: VREDRPLSQSVTYSVEENGHPDM*THWDSQ
Trigger: TTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCC...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAACTTCAAGCTTGCCCATaGCCACTTCCTCCAGAATTC +
Preference number: 2 (lower is better)
Translates to: SAASWGLSSYCVCVCVCELQACP*PLPPEF
Trigger: GAATTCTGGAGGAAGTGGCCATGGGCAAGCTTGAAG...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 90 bp CACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATaGGCCTACTGTCAGGTACTGAGAAGTGTGAGATGTATTATATAT +
Preference number: 2 (lower is better)
Translates to: HLGMWPAEWLRLPGS*AYCQVLRSVRCIIY
Trigger: ATATATAATACATCTCACACTTCTCAGTACCTGACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGGAGTCTGTGGGCTCTaGACTCCCACCCTCCCCACT +
Preference number: 2 (lower is better)
Translates to: PALLGIEFVSHSICRESSGVCGL*TPTLPT
Trigger: AGTGGGGAGGGTGGGAGTCCAGAGCCCACAGACTCC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 90 bp CAGTCCCGAGTCATAAGAAACAGGCAGGTAGGAAAAAGAGCAACCTaGAACAGTCTTTTATATCTCAAGGAGGGAGCCTCATCCCATCTC +
Preference number: 2 (lower is better)
Translates to: QSRVIRNRQVGKRAT*NSLLYLKEGASSHL
Trigger: GAGATGGGATGAGGCTCCCTCCTTGAGATATAAAAGACTGTTCAAGGTTGCTCTTTTTCCTACCTGCCTGTTTCTTATGACTCGGGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCAGAGCAGGAAGAGGCTaGTCATTTGAGTTAGCGTTG +
Preference number: 2 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSRAGRG*SFELAL
Trigger: CAACGCTAACTCAAATGAGCAGCCTCTTCCTGCTCT...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTTGGGTGGGGGAGGGGTaGAGAACCAGTTCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAWVGEG*RTSSAF
Trigger: GAAAGCAGAACTGGTTCTCCACCCCTCCCCCACCCA...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTAAAGCTCACACTGCTTaGATCCACTGCCTGGGCGGG +
Preference number: 2 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAKAHTA*IHCLGG
Trigger: CCCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTT...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGAAGCTGCTTGCATATTaGAAAAAGGAAGGTCCCAAA +
Preference number: 2 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWKLLAY*KKEGPK
Trigger: TTTGGGACCTTCCTTTTTTCAATATGCAAGCAGCTT...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTAGGCTGCTGTGGCTCTaGATCCCTTCCTCGAACATC +
Preference number: 2 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPARLLWL*IPSSNI
Trigger: GATGTTCGAGGAAGGGATTCAGAGCCACAGCAGCCT...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGGAGCAGATGCTGTGTaGGGGGAAGCAAGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PALLGIEFVSHSICRESSGADAV*GEARKG
Trigger: TCCTTTCCTTGCTTCCCCGCACACAGCATCTGCTCC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCAGAGAAAGCAAAGTGTaGCTTTCAACAACAGGGACT +
Preference number: 2 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSRESKV*LSTTGT
Trigger: AGTCCCTGTTGTTGAAAGTCACACTTTGCTTTCTCT...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR GCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCCCAAATGTGTTTACTaGAGAGAAGCCGTCTCCCGT +
Preference number: 2 (lower is better)
Translates to: PALLGIEFVSHSICRESSPKCVY*REAVSR
Trigger: ACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGGAAAAGTGGGCTTTTaGAGACAGAGCAGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: PALLGIEFVSHSICRESSGKVGF*RQSRKR
Trigger: CCTCTTCCTGCTCTGTCTCCAAAAGCCCACTTTTCC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCCCACCTAGTTCAAAGTaGACTGTTAAAAGTTTGACC +
Preference number: 2 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSPPSSK*TVKSLT
Trigger: GGTCAAACTTTTAACAGTCCACTTTGAACTAGGTGG...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGGTACAGGAGGCTTGTaGATAGATTGTTACAACCTG +
Preference number: 2 (lower is better)
Translates to: PALLGIEFVSHSICRESSGTGGL*IDCYNL
Trigger: CAGGTTGTAACAATCTATTCACAAGCCTCCTGTACC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp GGAACCAATGCCAGGAGAGCAATGGTGGCATGCCCCTaGCTCGGTGCAGGTCTCAGAGGAGCAGCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: GTNARRAMVACP*LGAGLRGAAEG
Trigger: CCCCTCAGCTGCTCCTCTGAGACCTGCACCGAGGCAGGGGCATGCCACCATTGCTCTCCTGGCATTGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp ACAGACCATGTGAAAGCTCACACTGCTTGGATCCACTaGCTGGGCGGGCGGCTCCAGGCTGCTGTGGCTCTG +
Preference number: 3 (lower is better)
Translates to: TDHVKAHTAWIH*LGGRLQAAVAL
Trigger: CAGAGCCACAGCAGCCTGGAGCCGCCCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTTCACATGGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp TGCTTGGATCCACTGCCTGGGCGGGCGGCTCCAGGCTaGTGTGGCTCTGAATCCCTTCCTCGAACATCCATA +
Preference number: 3 (lower is better)
Translates to: CLDPLPGRAAPG*CGSESLPRTSI
Trigger: TATGGATGTTCGAGGAAGGGATTCAGAGCCACAGCAGCCTGGAGCCGCCCGCCCAGGCAGTGGATCCAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp CCAAGAGGAACCAATGCCAGGAGAGCAATGGTGGCATaGCCCTGCCTCGGTGCAGGTCTCAGAGGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PRGTNARRAMVA*PCLGAGLRGAA
Trigger: AGCTGCTCCTCTGAGACCTGCACCGAGGCAGGGGCATGCCACCATTGCTCTCCTGGCATTGGTTCCTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp GGCCGAGGCTCCGGGAGCTCAGGCTGGCTTAGGACTTaGCATCATACAGAGCTCATCCATCTGTCAGCCCAC +
Preference number: 3 (lower is better)
Translates to: GRGSGSSGWLRT*HHTELIHLSAH
Trigger: GTGGGCTGACAGATGGATGAGCTCTGTATGATGCCAAGTCCTAAGCCAGCCTGAGCTCCCGGAGCCTCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTGGTGTGAGGACCACCTaGACCCACAACCTGACCTTC +
Preference number: 3 (lower is better)
Translates to: APREATPSDKLVLKTGGPGVRTT*THNLTF
Trigger: GAAGGTCAGGTTGTGGGTCAAGGTGGTCCTCACACC...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp GCAGCTGCTGGAGTTGAGGATTGCACTGTCCACCTGTaGGCAGCAGACGGATGGGTGGACAGAGGCAGAGCA +
Preference number: 3 (lower is better)
Translates to: AAAGVEDCTVHL*AADGWVDRGRA
Trigger: TGCTCTGCCTCTGTCCACCCATCCGTCTGCTGCTCACAGGTGGACAGTGCAATCCTCAACTCCAGCAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp GTCCTAGTAACAGACCATGTGAAAGCTCACACTGCTTaGATCCACTGCCTGGGCGGGCGGCTCCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: VLVTDHVKAHTA*IHCLGGRLQAA
Trigger: AGCAGCCTGGAGCCGCCCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTTCACATGGTCTGTTACTAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp AGGGGGCTGACAGGGCACCCTGACATGTGCACACATTaGGACTCTCAAGACAACCTACGTGTGGGTGCCTCC +
Preference number: 3 (lower is better)
Translates to: RGLTGHPDMCTH*DSQDNLRVGAS
Trigger: GGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp CTGTACCTCCAAGAGGAACCAATGCCAGGAGAGCAATaGTGGCATGCCCCTGCCTCGGTGCAGGTCTCAGAG +
Preference number: 3 (lower is better)
Translates to: LYLQEEPMPGEQ*WHAPASVQVSE
Trigger: CTCTGAGACCTGCACCGAGGCAGGGGCATGCCACCATTGCTCTCCTGGCATTGGTTCCTCTTGGAGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp GTTCAGCTCTATCTCCACGCCTCAGGAAGGGCTGTGTaGGGGCACACCTGGATGTTCACGTCACCTGCATGC +
Preference number: 3 (lower is better)
Translates to: VQLYLHASGRAV*GHTWMFTSPAC
Trigger: GCATGCAGGTGACGTGAACATCCAGGTGTGCCCCCACACAGCCCTTCCTGAGGCGTGGAGATAGAGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp CTCAGAGGAGCAGCTGAGGGGGCTGACAGGGCACCCTaGCATGTGCACACATTGGGACTCTCAAGACAACCT +
Preference number: 3 (lower is better)
Translates to: LRGAAEGADRAP*HVHTLGLSRQP
Trigger: AGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCTCAGCTGCTCCTCTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp ACTGGCCTTCTGTCAGAAGCAGAAGGGGGAGCTCCCTaGCCGCTGTACCTCCAAGAGGAACCAATGCCAGGA +
Preference number: 3 (lower is better)
Translates to: TGLLSEAEGGAP*PLYLQEEPMPG
Trigger: TCCTGGCATTGGTTCCTCTTGGAGGTACAGCGGTCAGGGAGCTCCCCCTTCTGCTTCTGACAGAAGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp AGAAGTCCTAGTAACAGACCATGTGAAAGCTCACACTaGTTGGATCCACTGCCTGGGCGGGCGGCTCCAGGC +
Preference number: 3 (lower is better)
Translates to: RSPSNRPCESSH*LDPLPGRAAPG
Trigger: GCCTGGAGCCGCCCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTTCACATGGTCTGTTACTAGGACTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp GAGCAGCTGAGGGGGCTGACAGGGCACCCTGACATGTaGACACATTGGGACTCTCAAGACAACCTACGTGTG +
Preference number: 3 (lower is better)
Translates to: EQLRGLTGHPDM*THWDSQDNLRV
Trigger: CACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACATGTCAGGGTGCCCTGTCAGCCCCCTCAGCTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp CCCTCTCTGCTTCACCTGGGTATGTGGCCTGCGGAGTaGCTGAGGTTACCAGGATCATTGGCCTACTGTCAG +
Preference number: 3 (lower is better)
Translates to: PSLLHLGMWPAE*LRLPGSLAYCQ
Trigger: CTGACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGCAGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp AGAGGCAGAGCACGGGGAAGGCTAGGCGCCAACCACTaGCCTTCCAGCCTCAAGATTTGGTCAGTCCTTGTT +
Preference number: 3 (lower is better)
Translates to: RGRARGRLGANH*PSSLKIWSVLV
Trigger: AACAAGGACTGACCAAATCTTGAGGCTGGAAGGCCAGTGGTTGGCGCCTAGCCTTCCCCGTGCTCTGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp AGGAGATGCTTTCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATGACAACCTTCCTCCAGAATTCTaGGGGTGCTGTGGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: RRCFQHSVATLRGPNDDNLPPEF*GCCGWG
Trigger: CCCCCACCCACAGCACCCCAAGAATTCTGGAGGAAG...GTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp AGACAAGCTGGTTCTAAAGACAGGTGGGCCTGCTTGTaGAGGAGGTGGCAGATGGGCCACTGGACCAGCTCT +
Preference number: 3 (lower is better)
Translates to: RQAGSKDRWACL*RRWQMGHWTSS
Trigger: AGAGCTGGTCCAGTGGCCCATCTGCCACCTCCTTCACAAGCAGGCCCACCTGTCTTTAGAACCAGCTTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp TGGGACTCTCAAGACAACCTACGTGTGGGTGCCTCCTaGCCTCAAAACCTGGGAGTACCTGCTCTCTTAGGG +
Preference number: 3 (lower is better)
Translates to: WDSQDNLRVGAS*PQNLGVPALLG
Trigger: CCCTAAGAGAGCAGGTACTCCCAGGTTTTGAGGGCAGGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp CCAGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTaGGTGGCCACACACTGCTATTTCCATGGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: PARCHHGVPSLC*VATHCYFHGQQ
Trigger: CTGCTGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp GGGCCTTGGGTAAGCATCCTAGACTCCTCACCCACATaGGCTCAGTGTGACCTTGCCACCACTGCTTGCTTA +
Preference number: 3 (lower is better)
Translates to: GPWVSILDSSPT*AQCDLATTACL
Trigger: TAAGCAAGCAGTGGTGGCAAGGTCACACTGAGCTCATGTGGGTGAGGAGTCTAGGATGCTTACCCAAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp TCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATaGCAACAGAGGGCCTTGGGTAAGCATCCTAGACTC +
Preference number: 3 (lower is better)
Translates to: SALCGHSQRTQR*QQRALGKHPRL
Trigger: GAGTCTAGGATGCTTACCCAAGGCCCTCTGTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp CACACATTGGGACTCTCAAGACAACCTACGTGTGGGTaGCTCCTGCCCTCAAAACCTGGGAGTACCTGCTCT +
Preference number: 3 (lower is better)
Translates to: HTLGLSRQPTCG*LLPSKPGSTCS
Trigger: AGAGCAGGTACTCCCAGGTTTTGAGGGCAGGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp GGGGCACACCTGGATGTTCACGTCACCTGCATGCTGTaGCTCAGTGGTTCATGTGACTTCAAGCAGTGTGAG +
Preference number: 3 (lower is better)
Translates to: GAHLDVHVTCML*LSGSCDFKQCE
Trigger: CTCACACTGCTTGAAGTCACATGAACCACTGAGGCACAGCATGCAGGTGACGTGAACATCCAGGTGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TGTGCACACATTGGGACTCTCAAGACAACCTACGTGTaGGTGCCTCCTGCCCTCAAAACCTGGGAGTACCTG +
Preference number: 3 (lower is better)
Translates to: CAHIGTLKTTYV*VPPALKTWEYL
Trigger: CAGGTACTCCCAGGTTTTGAGGGCAGGAGGCACCCACACGTAGGTTGTCTTGAGAGTCCCAATGTGTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACGCACACCCACTAAAGTaGCTGCTCCTGGCCATGGGG +
Preference number: 3 (lower is better)
Translates to: VREDRPLSQSVTYSVEENAHPLK*LLLAMG
Trigger: CCCCATGGCCAGGAGCAGCAACTTTAGTGGGTGTGC...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp CTCATCCCATCTCTGAATCCAATGTTAGGACATTCCTaGAAGGAGATGGCGAAGCGTGGGCCCCACCCAGCT +
Preference number: 3 (lower is better)
Translates to: LIPSLNPMLGHS*KEMAKRGPHPA
Trigger: AGCTGGGTGGGGCCCACGCTTCGCCATCTCCTTTCAGGAATGTCCTAACATTGGATTCAGAGATGGGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TTTGTTTCTGACCTGAGTTTGTGGCATGCCTTGCCCTaGAGCAGATGCTGTGTGCGGGGAAGCAAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: FVSDLSLWHALP*SRCCVRGSKER
Trigger: CCTTTCCTTGCTTCCCCGCACACAGCATCTGCTCCAGGGCAAGGCATGCCACAAACTCAGGTCAGAAACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp AATGTTAGGACATTCCTGAAAGGAGATGGCGAAGCGTaGGCCCCACCCAGCTCAGGTTCAGCTCTATCTCCA +
Preference number: 3 (lower is better)
Translates to: NVRTFLKGDGEA*APPSSGSALSP
Trigger: TGGAGATAGAGCTGAACCTGAGCTGGGTGGGGCCCACGCTTCGCCATCTCCTTTCAGGAATGTCCTAACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTaGCCTGTCCAAGGTCTGTATCTTCAGCATCTCTGG +
Preference number: 3 (lower is better)
Translates to: WSSKLEAQSKDP*PVQGLYLQHLW
Trigger: CCAGAGATGCTGAAGATACAGACCTTGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp CCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTaGCCACACACTGCTATTTCCATGGCCAGCAGTTCT +
Preference number: 3 (lower is better)
Translates to: PDVTMECHLFAG*PHTAISMASSS
Trigger: AGAACTGCTGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAAGTTTCTGACCTGAGTTaGTGGCATGCCTTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEVSDLS*WHALPW
Trigger: CCAGGGCAAGGCATGCCACAAACTCAGGTCAGAAAC...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACGAGCAGCTGCTGGAGTaGAGGATTGCACTGTCCACC +
Preference number: 3 (lower is better)
Translates to: VREDRPLSQSVTYSVEENEQLLE*RIALST
Trigger: GGTGGACAGTGCAATCCTCAACTCCAGCAGCTGCTC...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp GAACATCAGCATGAGATCAGGCTAGAACTGTGGATATaGTGCCTTGCAATAGTCGGGGCGCGTCAGTCCAGC +
Preference number: 3 (lower is better)
Translates to: EHQHEIRLELWI*CLAIVGARQSS
Trigger: GCTGGACTGACGCGCCCCGACTATTGCAAGGCATCATATCCACAGTTCTAGCCTGATCTCATGCTGATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp CAGAGCAGGATGCCAAGTGTCTTATCTGAAACCAAATaGCCACAGTTGACTCCCCAGCCTCCACATGCTCTG +
Preference number: 3 (lower is better)
Translates to: QSRMPSVLSETK*PQLTPQPPHAL
Trigger: CAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTTTCAGATAAGACACTTGGCATCCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp GTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCTaGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAAG +
Preference number: 3 (lower is better)
Translates to: VRFSKSPTGHPS*KPKAKTPGLSK
Trigger: CTTGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCGATTTAGAGAAACGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTAGGCTTGTGAATAGATaGTTACAACCTGCTCTCCCC +
Preference number: 3 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGRLVNR*LQPALP
Trigger: GGGGAGAGCAGGTTGTAACAATCTATTCACAAGCCT...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCGAAAGCTCACACTGCTaGGATCCACTGCCTGGGCGG +
Preference number: 3 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSESSHC*DPLPGR
Trigger: CCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTTC...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACAGTTTGTGGCATGCCTaGCCCTGGAGCAGATGCTGT +
Preference number: 3 (lower is better)
Translates to: VREDRPLSQSVTYSVEENSLWHA*PWSRCC
Trigger: ACAGCATCTGCTCCAGGGCAAGGCATGCCACAAACT...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGAATGGGCCAAAGCATTTaGATGGAGTGGTCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRMGQSI*MEWSCL
Trigger: GAGACAGGACCACTCCATCAAAATGCTTTGGCCCAT...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTAACTGTAGAAATCCAGTaGTGGAAAACCGGCAGGTAT +
Preference number: 3 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLTVEIQ*WKTGRY
Trigger: ATACCTGCCGGTTTTCCACAACTGGATTTCTACAGT...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp CTTAAGGGGTGGATCTCTCTGGTCCAGGTCTCCCAATaGAGCTGCTTAGCCCAGGAAATGAAAAGACATCAG +
Preference number: 3 (lower is better)
Translates to: LKGWISLVQVSQ*SCLAQEMKRHQ
Trigger: CTGATGTCTTTTCATTTCCTGGGCTAAGCAGCTGCATTGGGAGACCTGGACCAGAGAGATCCACCCCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp CATTCGTTAGGATCTGAGGCACATGTGCCCACGGGCTaGACATCAGAGTCATGTGATCACTGTGAAGCCATT +
Preference number: 3 (lower is better)
Translates to: HSLGSEAHVPTG*TSESCDHCEAI
Trigger: AATGGCTTCACAGTGATCACATGACTCTGATGTGCAGCCCGTGGGCACATGTGCCTCAGATCCTAACGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp ATCATCAACCAGACACCATGGTTCATCCCACGCCTCTaGACAAAGGGAAATCAGCGCAGGGAGTATATGCGT +
Preference number: 3 (lower is better)
Translates to: IINQTPWFIPRL*TKGNQRREYMR
Trigger: ACGCATATACTCCCTGCGCTGATTTCCCTTTGTCCAGAGGCGTGGGATGAACCATGGTGTCTGGTTGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACTATTGTATTCCCAAATaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHYCIPK*GCVCVC
Trigger: ACACACACACACACACCCCAATTTGGGAATACAATA...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCAGGAAAAAGAGCAACCTaGAACAGTCTTTTATATCTC +
Preference number: 3 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPGKRAT*NSLLYL
Trigger: GAGATATAAAAGACTGTTCAAGGTTGCTCTTTTTCC...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp CTGATGAGTGTGATGGAGTCTGAGTCCTTCCGCACGTaGCTTAGCTCTAAGGAGAAGTTTCCAGAGCAGGAT +
Preference number: 3 (lower is better)
Translates to: LMSVMESESFRT*LSSKEKFPEQD
Trigger: ATCCTGCTCTGGAAACTTCTCCTTAGAGCTAAGTCACGTGCGGAAGGACTCAGACTCCATCACACTCATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATaGTCTGACACCTTCAGACACCATCAAGTCCAAATA +
Preference number: 3 (lower is better)
Translates to: NQMPTVDSPAST*SDTFRHHQVQI
Trigger: TATTTGGACTTGATGGTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp CATGTGTCTGCACACTGCCCAACACCCACAAGAAACTaGAAGACCAAACCAAACCCACAAATGGTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: HVSAHCPTPTRN*KTKPNPQMVPR
Trigger: TCTGGGAACCATTTGTGGGTTTGGTTTGGTCTTTCAGTTTCTTGTGGGTGTTGGGCAGTGTGCAGACACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TGCTCTGACACCTTCAGACACCATCAAGTCCAAATATaGTCCATGCTTCTTCCAGGCCCTTTAACCCTCTGT +
Preference number: 3 (lower is better)
Translates to: CSDTFRHHQVQI*SMLLPGPLTLC
Trigger: ACAGAGGGTTAAAGGGCCTGGAAGAAGCATGGACCATATTTGGACTTGATGGTGTCTGAAGGTGTCAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp GGATGTGTGGGATTTTTAACCTTTTTGTTTCTGACCTaGGTTTGTGGCATGCCTTGCCCTGGAGCAGATGCT +
Preference number: 3 (lower is better)
Translates to: GCVGFLTFLFLT*VCGMPCPGADA
Trigger: AGCATCTGCTCCAGGGCAAGGCATGCCACAAACTCAGGTCAGAAACAAAAAGGTTAAAAATCCCACACATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp ACGTGTCTCTCAAATGTTATCATCAACCAGACACCATaGTTCATCCCACGCCTCTGGACAAAGGGAAATCAG +
Preference number: 3 (lower is better)
Translates to: TCLSNVIINQTP*FIPRLWTKGNQ
Trigger: CTGATTTCCCTTTGTCCAGAGGCGTGGGATGAACCATGGTGTCTGGTTGATGATAACATTTGAGAGACACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TTTTCAACAACGGTATCTTGTGGAACCAGAGAGACATaGCCAATAATGCACGGGGAGCCAAAGGACATGGAT +
Preference number: 3 (lower is better)
Translates to: FSTTVSCGTRET*PIMHGEPKDMD
Trigger: ATCCATGTCCTTTGGCTCCCCGTGCATTATTGGCCATGTCTCTCTGGTTCCACAAGATACCGTTGTTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR-3UTR CAA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGTTCTCGAGTGTCCTGTaGCTATTAAGTGTTGTCATT +
Preference number: 3 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWFSSVL*LLSVVI
Trigger: AATGACAACACTTAATAGCAACAGGACACTCGAGAA...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp TCACAGAAACCAAAATCAAATCAATCCCTAACGTCATaGCCCAGACCGACAACTCATCTGATGAGTGTGATG +
Preference number: 3 (lower is better)
Translates to: SQKPKSNQSLTS*PRPTTHLMSVM
Trigger: CATCACACTCATCAGATGAGTTGTCGGTCTGGGGCATGACGTTAGGGATTGATTTGATTTTGGTTTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp TTCTTTTTATTGAAGTGTTTCTGGAGCATTAGTTTATaGCGGCCACTACGCTGTTGGTGCCGTCTCTCTACT +
Preference number: 3 (lower is better)
Translates to: FFLLKCFWSISL*RPLRCWCRLST
Trigger: AGTAGAGAGACGGCACCAACAGCGTAGTGGCCGTCATAAACTAATGCTCCAGAAACACTTCAATAAAAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp TACCACCACCTAGTTCAAAGTGGACTGTTAAAAGTTTaGCCATCATCACTGGTTCTTAAGGGGTGGATCTCT +
Preference number: 3 (lower is better)
Translates to: YHHLVQSGLLKV*PSSLVLKGWIS
Trigger: AGAGATCCACCCCTTAAGAACCAGTGATGATGGTCAAACTTTTAACAGTCCACTTTGAACTAGGTGGTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TTGTCTGCAGTTAAAACTGCTATTGTATTCCCAAATTaGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: LSAVKTAIVFPN*GVCVCVCVCVC
Trigger: ACACACACACACACACACACACACACACACACCCCAATTTGGGAATACAATAGCAGTTTTAACTGCAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR TCA 72 bp TTACAAACTAGAGCAGAAAGCATGTGGGAAAGAGGGTaGACCACAATTGGTCCTGGGGAGAATTTCTTTTTA +
Preference number: 3 (lower is better)
Translates to: LQTRAESMWERG*TTIGPGENFFL
Trigger: TAAAAAGAAATTCTCCCCAGGACCAATTGTGGTTCACCCTCTTTCCCACATGCTTTCTGCTCTAGTTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR GCA 72 bp AAACCAAACCCACAAATGGTTCCCAGACCTTTTTCCTaGAGTGTTAGAAAGTTCCATGTGTTTTCAACAACG +
Preference number: 3 (lower is better)
Translates to: KPNPQMVPRPFS*SVRKFHVFSTT
Trigger: CGTTGTTGAAAACACATGGAACTTTCTAACACTGCAGGAAAAAGGTCTGGGAACCATTTGTGGGTTTGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CCA 72 bp TTGAAGTTCTCATTTGTACCACCACCTAGTTCAAAGTaGACTGTTAAAAGTTTGACCATCATCACTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LKFSFVPPPSSK*TVKSLTIITGS
Trigger: AGAACCAGTGATGATGGTCAAACTTTTAACAGTCCACTTTGAACTAGGTGGTGGTACAAATGAGAACTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTCCTCGAACCTGTAGGTaGCAGGCGGGCAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: APREATPSDKLVLKTGGPPRTCR*QAGRQA
Trigger: TGCCTGCCTGCCCGCCTGGCACCTACAGGTTCGAGG...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGGCCGGAGGTTGGAGATaGCAGTCCTCTCCTTGTTAT +
Preference number: 4 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLAGGWR*QSSPCY
Trigger: ATAACAAGGAGAGGACTGTCATCTCCAACCTCCGGC...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp GCTGCTCCTGGCCATGGGGAGTTGGTGTCTTACATCTaGCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGG +
Preference number: 4 (lower is better)
Translates to: AAPGHGELVSYI*LPGRPPLQTSW
Trigger: CCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGCAAGATGTAAGACACCAACTCCCCATGGCCAGGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp GCTAGGCGCCAACCACTGGCCTTCCAGCCTCAAGATTaGGTCAGTCCTTGTTTAGCCCTGGGGGTTGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARRQPLAFQPQD*VSPCLALGVAG
Trigger: CCCCGCAACCCCCAGGGCTAAACAAGGACTGACCAAATCTTGAGGCTGGAAGGCCAGTGGTTGGCGCCTAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTGTTGCGGATGAAGCCTaGGGGACACTCCTGCATGCA +
Preference number: 4 (lower is better)
Translates to: APREATPSDKLVLKTGGPVADEA*GTLLHA
Trigger: TGCATGCAGGAGTGTCCCTCAGGCTTCATCCGCAAC...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGTGGTCTTCTCACACATaGGCTTCTCCTCCAATGTCC +
Preference number: 4 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLWSSHT*ASPPMS
Trigger: GGACATTGGAGGAGAAGCCCATGTGTGAGAAGACCA...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGCTTGGGCACATTTTCTaGCAGCGATTTGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLLGHIF*QRFVVQ
Trigger: CTGGACCACAAATCGCTGCCAGAAAATGTGCCCAAG...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTAGGTGTCAGCTACCGTaGTGTTCCTGCTTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: APREATPSDKLVLKTGGPRCQLP*CSCFGW
Trigger: CCAGCCGAAGCAGGAACACCACGGTAGCTGACACCT...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp AGTCCTAGTAACAGACCATGTGAAAGCTCACACTGCTaGGATCCACTGCCTGGGCGGGCGGCTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSNRPCESSHC*DPLPGRAAPGC
Trigger: GCAGCCTGGAGCCGCCCGCCCAGGCAGTGGATCCAAGCAGTGTGAGCTTTCACATGGTCTGTTACTAGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGCACTTCACAATCAGCTaGGAGGAAGAGTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLHFTIS*EEEFDA
Trigger: AGCATCAAACTCTTCCTCTCAGCTGATTGTGAAGTG...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTACACATCAGCTGCGCTaGAATACTCGGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: APREATPSDKLVLKTGGPTHQLR*NTRGSQ
Trigger: CTGTGAACCCCGAGTATTTCAGCGCAGCTGATGTGT...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACCGAAGTTGGAGGCGCTaGAGCCCAGCTTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHRSWRR*SPASQP
Trigger: AGGCTGAGAAGCTGGGCTGCAGCGCCTCCAACTTCG...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTAACGGTCAGGTTCCGGTaGTTCCAGTCCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLTVRFR*FQSHSC
Trigger: GCAGCTGTGGGACTGGAACCACCGGAACCTGACCGT...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTATGACCAGGGTGGGCTaGCCTTGGGATACCACACCC +
Preference number: 4 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGMTRVG*PWDTTP
Trigger: GGGTGTGGTATCCCAAGGCCAGCCCACCCTGGTCAT...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp ACACCCACTAAAGTTGCTGCTCCTGGCCATGGGGAGTaGGTGTCTTACATCTTGCTCCCAGGGAGGCCACCC +
Preference number: 4 (lower is better)
Translates to: TPTKVAAPGHGE*VSYILLPGRPP
Trigger: GGGTGGCCTCCCTGGGAGCAAGATGTAAGACACCAACTCCCCATGGCCAGGAGCAGCAACTTTAGTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGAAAGCCCAATATCCTTaGGATTGGTCATCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLKAQYP*DWSSRR
Trigger: TCTTCGAGATGACCAATCTCAAGGATATTGGGCTTT...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTCTCCTCCAATGTCCCTaGACACAGGTCCCCACATTC +
Preference number: 4 (lower is better)
Translates to: SLPRTSITNSQAESPEPFLLQCP*TQVPTF
Trigger: GAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAG...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCTCTGGCAGCGATTTGTaGTCCAGCAGCGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGSGSDL*SSSGSC
Trigger: ACAACTACCGCTGCTGGACCACAAATCGCTGCCAGA...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCACACTGCTCTCAGCGTTaGGGATGTTGGCGCAGAAAT +
Preference number: 4 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPHCSQR*GCWRRN
Trigger: ATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTG...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp GGCCCGGGAGTGGGCTTTATAGCACACCCACTAAAGTaGCTGCTCCTGGCCATGGGGAGTTGGTGTCTTACA +
Preference number: 4 (lower is better)
Translates to: GPGVGFIAHPLK*LLLAMGSWCLT
Trigger: TGTAAGACACCAACTCCCCATGGCCAGGAGCAGCAACTTTAGTGGGTGTGCTATAAAGCCCACTCCCGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp CTCCACTGGCGTGCTGTGCTCATGGTGACTGCTGGGTaGAAAAGTAGGGGACCAGGTGAGGAGAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LHWRAVLMVTAG*KSRGPGEEKDQ
Trigger: CTGGTCTTTCTCCTCACCTGGTCCCCTACTTTTCAACCCAGCAGTCACCATGAGCACAGCACGCCAGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTTGTTGGCCACTTGCATaGCGTCTCTCCGCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGCWPLA*RLSASF
Trigger: AAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACA...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACTTTCGGGTTCATCCTTaGCCACACCCTTGGCCACTC +
Preference number: 4 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHFRVHP*PHPWPL
Trigger: GAGTGGCCAAGGGTGTGGTCAAGGATGAACCCGAAA...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CGCCAACTGGTCATCCAAGCTGGAAGCCCAAAGCAAAGACCCCTGGCCTGTCCACCACATGGTGACAATTaGACTCCTTCATCACCGAGG +
Preference number: 4 (lower is better)
Translates to: RQLVIQAGSPKQRPLACPPHGDN*TPSSPR
Trigger: CCTCGGTGATGAAGGAGTTCAATTGTCACCATGTGG...TGGACAGGCCAGGGGTCTTTGCTTTGGGCTTCCAGCTTGGATGACCAGTTGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTGTAGGCCATGCCATCTaGAATCTCTCCAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: SLPRTSITNSQAESPEPFVGHAI*NLSSHL
Trigger: CAGATGGCTGGAGAGATTGCAGATGGCATGGCCTAC...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGCCCAGGCACTCCGGGTaGCAGCACTCGTTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWPRHSG*QHSLFS
Trigger: CGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGG...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGGAGTTTTCGGGTCTTaGCTCCCAGGTCACCGGACC +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSGVFGS*LPGHRT
Trigger: GGTCCGGTGACCTGGGAGCCAAGACCCGAAAACTCC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTGCTCCTCTCCTAAGATaGGACGAAGGTTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLPRTSITNSQAESPEPFAPLLR*DEGSSG
Trigger: TCCTGAAGAACCTTCGTCTCATCTTAGGAGAGGAGC...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCATCATCTGCTCCTTCTaGTGGCATGGTTCTCGCAAA +
Preference number: 4 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGIICSF*WHGSRK
Trigger: TTTGCGAGAACCATGCCAGCAGAAGGAGCAGATGAT...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AGGAGATGCTTTCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATGACAACCTTCCCGCACACACTTaGGCACATTTTCTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: RRCFQHSVATLRGPNDDNLPAHT*AHFLAA
Trigger: CGCTGCCAGAAAATGTGCCCAAGTGTGTGCGGGAAG...GTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTGCTCTCCGTTGTTCCTaGTGTTTATGTCCCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLPRTSITNSQAESPEPFALRCS*CLCPLC
Trigger: GCAAAGGGGACATAAACACCAGGAACAACGGAGAGC...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTATTGGCCCCACGGATATaGTCGTTTTCCACCATGGTG +
Preference number: 4 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLLAPRI*SFSTMV
Trigger: CACCATGGTGGAAAACGACCATATCCGTGGGGCCAA...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp CATACCAGCCAGATGTCACCATGGAGTGCCATCTCTTaGCTGGGTGGCCACACACTGCTATTTCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: HTSQMSPWSAIS*LGGHTLLFPWP
Trigger: TGGCCATGGAAATAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCTGGTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTAGGTCGTGGTGGAGGTaGAACGGAGAACATCACTTT +
Preference number: 4 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGRSWWR*NGEHHF
Trigger: AAAGTGATGTTCTCCGTTTCACCTCCACCACGACCT...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTCACAGGATCTGTCCATaGCCCATTCCCAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSHRICP*PIPREG
Trigger: TCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTG...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCACCGGAGATAACTTTTaGGATCACCGCGTGTCATTA +
Preference number: 4 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGTGDNF*DHRVSL
Trigger: TAATGACACGCGGTGATCTCAAAAGTTATCTCCGGT...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAACTCAGCCTTGTGTCCTaGGTGTCTTTCAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SAASWGLSSYCVCVCVCELSLVS*VSFRQR
Trigger: CCTCTGCCTGAAAGACACTCAGGACACAAGGCTGAG...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACACTCGTTGTTCTCGGTaGAGGCTCGCTTCCCGCACA +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENTRCSR*RLASRT
Trigger: TGTGCGGGAAGCGAGCCTGCACCGAGAACAACGAGT...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACACGAAACGAAGAACTTaGTCGTTGGACAAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHTKRRT*SLDKPW
Trigger: CCAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGT...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGAGATGAGCAGGATGTaGAGGAAGCCCTCGATCACC +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSEMSRM*RKPSIT
Trigger: GGTGATCGAGGGCTTCCTCCACATCCTGCTCATCTC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCGCAAGGCCCTCTCGTTaGCGCGTCCCCCGTTCATGT +
Preference number: 4 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSARPSR*RVPRSC
Trigger: ACATGAACGGGGGACGCGCCAACGAGAGGGCCTTGC...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp ATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATaGGCCTACTGTCAGGTACTGAGAAGTGTGAGATGT +
Preference number: 4 (lower is better)
Translates to: MWPAEWLRLPGS*AYCQVLRSVRC
Trigger: ACATCTCACACTTCTCAGTACCTGACAGTAGGCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCAGTTGTACTCATTGTTaGTGGTGGTCTTCTCACACA +
Preference number: 4 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGSCTHC*WWSSHT
Trigger: TGTGTGAGAAGACCACCATCAACAATGAGTACAACT...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTGCTTCGGCTGGACATaGTCGTGTTGGCCACTTGCA +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENCFGWT*SCWPLA
Trigger: TGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTGTTCCTGCTTCGGCTaGACATGGTCGTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENCSCFG*TWSCWP
Trigger: TGGCCAACACGACCATGTCCAGCCGAAGCAGGAACA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGATCCTGTACTCCTGTCTaGACACACATTCCCGCTGAT +
Preference number: 4 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRSCTPV*THIPAD
Trigger: ATCAGCGGGAATGTGTGTCCAGACAGGAGTACAGGA...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGAGGAGGGCCGCATCTTaGGGTTATACTGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWRRAAS*GYTAST
Trigger: TGTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCT...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGACACCGCATCCAAGATaGGAGACCAGTCTATGGTGG +
Preference number: 4 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWTPHPR*ETSLWW
Trigger: CCACCATAGACTGGTCTCTCATCTTGGATGCGGTGT...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTTGTAGTAGTAGTGTCTaGAGGCCACGCAGGTTGTGT +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSCSSSV*RPRRLC
Trigger: ACACAACCTGCGTGGCCTGCAGACACTACTACTACA...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTTGCCCTTCAGGATGGTaGATCCTTGGAGCATTTGAG +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSCPSGW*ILGAFE
Trigger: CTCAAATGCTCCAAGGATGCACCATCCTGAAGGGCA...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTCATACAGCACTCCATTaGCCAACCTGCTGTTATTTC +
Preference number: 4 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGHTALH*PTCCYF
Trigger: GAAATAACAGCAGGTTGGGCAATGGAGTGCTGTATG...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGGAGACCAGTCTATGGTaGAGAGGTAACAGAGGTCGG +
Preference number: 4 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWETSLW*RGNRGR
Trigger: CCGACCTCTGTTACCTCTCCACCATAGACTGGTCTC...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCCCATGTTCCAGCTGTTaGAGCCACAGGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSPCSSC*SHRHPA
Trigger: GGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGG...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGGACATCTAGGGGAATaGAAGGGACTGAAGCATTGG +
Preference number: 4 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSGHLGE*KGLKHW
Trigger: CCAATGCTTCAGTCCCTTCCATTCCCCTAGATGTCC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAAGCAGCAAGGTCTCTGTaGACGAACTTGTTGGCATTG +
Preference number: 4 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEAARSL*TNLLAL
Trigger: CAATGCCAACAAGTTCGTCCACAGAGACCTTGCTGC...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTGGCCGAAGGGTCCAGTaGGACGCTCTCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPGRRVQ*DALHVL
Trigger: GAGAACATGGAGAGCGTCCCACTGGACCCTTCGGCC...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCAGCCCTCGATCACCGTaGAGTTTTCCAGGCGCTTCA +
Preference number: 4 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSSPRSP*SFPGAS
Trigger: TGAAGCGCCTGGAAAACTGCACGGTGATCGAGGGCT...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTTCCAGTCCCACAGCTaGTGCAAGTTCTGGTTGTCT +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENFQSHS*CKFWLS
Trigger: AGACAACCAGAACTTGCAGCAGCTGTGGGACTGGAA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTGTTTATGTCCCCTTTaGTCTGGCGTCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENCLCPL*SGVPWF
Trigger: GAACCAAGGGACGCCAGAGCAAAGGGGACATAAACA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTGTCGTGTTGGCCACTTaGATGACGTCTCTCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPVVLAT*MTSLRL
Trigger: GAGGCGGAGAGACGTCATGCAAGTGGCCAACACGAC...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATTCTCAGCCTCGTGGTTaGAGCTGTGGATATCGATGC +
Preference number: 4 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDSQPRG*SCGYRC
Trigger: GCATCGATATCCACAGCTGCAACCACGAGGCTGAGA...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAAGATTGCCCTTCAGGATaGTGCATCCTTGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEDCPSG*CILGAF
Trigger: AAATGCTCCAAGGATGCACCATCCTGAAGGGCAATC...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCCGTAACGTTTTTAAATaGTGCCTCCTTGTAGTAAAC +
Preference number: 4 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGRNVFK*CLLVVN
Trigger: GTTTACTACAAGGAGGCACCATTTAAAAACGTTACG...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AGGAGATGCTTTCAGCACTCTGTGGCCACTCTCAGAGGACCCAACGATGACAACACAAGATTTCACTTTTaGCCCCACGGATATGGTCGT +
Preference number: 4 (lower is better)
Translates to: RRCFQHSVATLRGPNDDNTRFHF*PHGYGR
Trigger: ACGACCATATCCGTGGGGCCAAAAGTGAAATCTTGT...GTTGTCATCGTTGGGTCCTCTGAGAGTGGCCACAGAGTGCTGAAAGCATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAACACACACTTCTGTCTTaGGATTTTCCGTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEHTLLS*DFPSPP
Trigger: AGGAGGTGACGGAAAATCCCAAGACAGAAGTGTGTG...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACGCCTGGGCACAAAGATaGAATTGTGAAGGAAATTCT +
Preference number: 4 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHAWAQR*NCEGNS
Trigger: AGAATTTCCTTCACAATTCCATCTTTGTGCCCAGGC...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTCGTGGTTGCAGCTGTaGATATCGATGCGGTACAGA +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENSWLQL*ISMRYR
Trigger: TCTGTACCGCATCGATATCCACAGCTGCAACCACGA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp ATGCCAAGTGTCTTATCTGAAACCAAATGCCCACAGTaGACTCCCCAGCCTCCACATGCTCTGACACCTTCA +
Preference number: 4 (lower is better)
Translates to: MPSVLSETKCPQ*TPQPPHALTPS
Trigger: TGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTTTCAGATAAGACACTTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACCTTGTTATCCACTCTaGTCTCAAAGAAAGGGTACT +
Preference number: 4 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRPCYPL*SQRKGT
Trigger: AGTACCCTTTCTTTGAGAGCAGAGTGGATAACAAGG...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTAGAGCAATGATCAGATaGATGAAGTTCTCATACGTC +
Preference number: 4 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGRAMIR*MKFSYV
Trigger: GACGTATGAGAACTTCATGCATCTGATCATTGCTCT...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGCTGCTCAGCCAGCGTaGCGATCTCCCAGAGGACGA +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSAAQPA*RSPRGR
Trigger: TCGTCCTCTGGGAGATCGCCACGCTGGCTGAGCAGC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAACACACAGCTTGGGATTaGAAGCAAAGTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEHTAWD*KQSTSF
Trigger: GAAAGATGTACTTTGCTTTCAATCCCAAGCTGTGTG...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATGACCAGACATCAGAATaGGTAGTGAAGACACCATCC +
Preference number: 4 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDDQTSE*VVKTPS
Trigger: GGATGGTGTCTTCACTACTCATTCTGATGTCTGGTC...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTGGCGGCCGGTACCGGTaGCACGTTATGATGATTCGG +
Preference number: 4 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAGGRYR*HVMMIR
Trigger: CCGAATCATCATAACGTGGCACCGGTACCGGCCGCC...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTGGGTATTTTGTCTTTaGAGCAGTAGTTGTGCCGGT +
Preference number: 4 (lower is better)
Translates to: VREDRPLSQSVTYSVEENWVFCL*SSSCAG
Trigger: ACCGGCACAACTACTGCTCCAAAGACAAAATACCCA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTAGCTTCTCAGCCTCGTaGTTGCAGCTGTGGATATCG +
Preference number: 4 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPSFSAS*LQLWIS
Trigger: CGATATCCACAGCTGCAACCACGAGGCTGAGAAGCT...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTCGATGCGGTACAGAGTaGAAGGCCGGAGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPARCGTE*KAGGWR
Trigger: TCTCCAACCTCCGGCCTTTCACTCTGTACCGCATCG...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGCTGCTGATAGTCGTTaGGGATGTCAATGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSAADSR*GCQCRA
Trigger: GGCCCGGCATTGACATCCGCAACGACTATCAGCAGC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCTACCGTGGTGTTCCTaGTTCGGCTGGACATGGTCG +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSLPWCS*FGWTWS
Trigger: CGACCATGTCCAGCCGAAGCAGGAACACCACGGTAG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGGCCACTTTAAAAAGATaGAGTTTTCGGGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWATLKR*SFRVLA
Trigger: AGCCAAGACCCGAAAACTCCATCTTTTTAAAGTGGC...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTATTCTGCTCCACTTCTaGCCTCAGAGACCGGAGATA +
Preference number: 4 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPILLHF*PQRPEI
Trigger: TATCTCCGGTCTCTGAGGCCAGAAGTGGAGCAGAAT...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCTGGGTTTAGACGGTTaGGTTTGGCCCCTCCGTACT +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSLGLDG*VWPLRT
Trigger: AGTACGGAGGGGCCAAACTCAACCGTCTAAACCCAG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCCTCGTTTACCGTCTTaGTGGCCACTCTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSPRLPS*WPLWFR
Trigger: CCGAAACCAGAGTGGCCATCAAGACGGTAAACGAGG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTCAGGGCTTCAGCCCATaGAGTAAAATGCCAGGCTCG +
Preference number: 4 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAQGFSP*SKMPGS
Trigger: CGAGCCTGGCATTTTACTGCATGGGCTGAAGCCCTG...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCAGGACTAGATTATTCTaGTCCACTTCTGGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSRTRLF*STSGLR
Trigger: TCTGAGGCCAGAAGTGGAGCAGAATAATCTAGTCCT...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp CGTAAATTCATTACTGCTAAAATGGGCCAAAGCATTTaGATGGAGTGGTCCTGTCTCCTCCTGGATGCCAGT +
Preference number: 4 (lower is better)
Translates to: RKFITAKMGQSI*MEWSCLLLDAS
Trigger: ACTGGCATCCAGGAGGAGACAGGACCACTCCATCAAAATGCTTTGGCCCATTTTAGCAGTAATGAATTTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTAAGGAGACCAAGGCATaGGAATGGCGGATCTTCACG +
Preference number: 4 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAKETKA*EWRIFT
Trigger: CGTGAAGATCCGCCATTCTCATGCCTTGGTCTCCTT...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCGAACTTGTTGGCATTaGGGTAGGCCATGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSRTCWH*GRPCHL
Trigger: CAGATGGCATGGCCTACCTCAATGCCAACAAGTTCG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGGGAATGGAAGGGACTaGAGCATTGGTGCGAATGTA +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSGNGRD*SIGANV
Trigger: TACATTCGCACCAATGCTTCAGTCCCTTCCATTCCC...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTCTCCTTCTGCTGGCATaGTTCTCGCAAAGACGAAGT +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSLLLLA*FSQRRS
Trigger: ACTTCGTCTTTGCGAGAACCATGCCAGCAGAAGGAG...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp GTCATAAGAAACAGGCAGGTAGGAAAAAGAGCAACCTaGAACAGTCTTTTATATCTCAAGGAGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: VIRNRQVGKRAT*NSLLYLKEGAS
Trigger: TGAGGCTCCCTCCTTGAGATATAAAAGACTGTTCAAGGTTGCTCTTTTTCCTACCTGCCTGTTTCTTATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR TCA 90 bp CCTGCTCTCTTAGGGATAGAATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTTGGTCATCTCGAAGATaGCCAGTGCGTAGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PALLGIEFVSHSICRESSWSSRR*PVRSCR
Trigger: TCTACAACTACGCACTGGTCATCTTCGAGATGACCA...AGAACTTTCTCTACAGATTGAATGACTGACAAATTCTATCCCTAAGAGAGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
3UTR CAA 72 bp GGCAAGAGAGGTTCAATTTTACACAGACATCCTGTCTaGAAGTTCTCATTTGTACCACCACCTAGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: GKRGSILHRHPV*KFSFVPPPSSK
Trigger: CTTTGAACTAGGTGGTGGTACAAATGAGAACTTCAAGACAGGATGTCTGTGTAAAATTGAACCTCTCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR GCA 90 bp GTCATCCCATCAAGGAATGTTCGTTTCTCTAAATCGCCAACTGGTCATCCAAGCAACGTTTTTAAATGGTaGCTCCTTGTAGTAAACTGT +
Preference number: 4 (lower is better)
Translates to: VIPSRNVRFSKSPTGHPSNVFKW*LLVVNC
Trigger: ACAGTTTACTACAAGGAGGCACCATTTAAAAACGTT...GCTTGGATGACCAGTTGGCGATTTAGAGAAACGAACATTCCTTGATGGGATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CCA 90 bp AATTTGTCAGTCATTCAATCTGTAGAGAAAGTTCTGTTCCAAAGTCAGCCAGCTAAGGGACTGAAGCATTaGTGCGAATGTACAAGATTT +
Preference number: 4 (lower is better)
Translates to: NLSVIQSVEKVLFQSQPAKGLKH*CECTRF
Trigger: AAATCTTGTACATTCGCACCAATGCTTCAGTCCCTT...AGCTGGCTGACTTTGGAACAGAACTTTCTCTACAGATTGAATGACTGACAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 90 bp GTCTGCAGGCCACGCAGGTTGTGTTGTCGTCCGGTGTGTGGCAGCTaGCCAGGCACTCCGGGTGGCAGCACTCGTTGTTCTCGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VCRPRRLCCRPVCGS*PGTPGGSTRCSRCR
Trigger: CCTGCACCGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGCCAGGCTCGCCCTCCTaGTTCGGAGGCAGGTCTACA +
Preference number: 5 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLPGSPS*FGGRST
Trigger: TGTAGACCTGCCTCCGAACAAGGAGGGCGAGCCTGG...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp GTTGTGTTGTCGTCCGGTGTGTGGCAGCTGCCCAGGCACTCCGGGTaGCAGCACTCGTTGTTCTCGGTGCAGGCTCGCTTCCCGCACACA +
Preference number: 5 (lower is better)
Translates to: VVLSSGVWQLPRHSG*QHSLFSVQARFPHT
Trigger: TGTGTGCGGGAAGCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGACAACACAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp CGCGTCCCCCGTTCATGTGAGCGTAAGGCTGTCTCTCATCAAAACTaGCGCGGAGAACGAGCACGCCAGGGCCCGGGCCATTCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: RVPRSCERKAVSHQN*RGERARQGPGHSQP
Trigger: AGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAACGGGGGACGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTGGGCAGTTGTCCGGCTaGTCCAGAAGGCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: APREATPSDKLVLKTGGPGQLSG*SRRPPS
Trigger: GGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCC...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCGGCAAGGCCCTCTCGTaGGCGCGTCCCCCGTTCATG +
Preference number: 5 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGGKALS*ARPPFM
Trigger: CATGAACGGGGGACGCGCCAACGAGAGGGCCTTGCC...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 90 bp CAGGCGGGCAGGCAGGCACACACACGCCTTTGTAGTAGTAGTGTCTaGAGGCCACGCAGGTTGTGTTGTCGTCCGGTGTGTGGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QAGRQAHTRLCSSSV*RPRRLCCRPVCGSC
Trigger: GCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCGTGTGTGTGCCTGCCTGCCCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCGGGTGGCAGCACTCGTaGTTCTCGGTGCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGGWQHS*FSVQAR
Trigger: GCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCC...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGGAAGCTCGCTCTCCGTaGTTCCTGGTGTTTATGTCC +
Preference number: 5 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLEARSP*FLVFMS
Trigger: GGACATAAACACCAGGAACAACGGAGAGCGAGCTTC...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 90 bp ACCGTGGTGTTCCTGCTTCGGCTGGACATGGTCGTGTTGGCCACTTaGATGACGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAAAGATG +
Preference number: 5 (lower is better)
Translates to: TVVFLLRLDMVVLAT*MTSLRLLSGLGTKM
Trigger: CATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 90 bp CGATCACCGTGCAGTTTTCCAGGCGCTTCAGCTGCTGATAGTCGTTaGGGATGTCAATGCCGGGCCCACAGATTTCTCCACTCGTCGGCC +
Preference number: 5 (lower is better)
Translates to: RSPCSFPGASAADSR*GCQCRAHRFLHSSA
Trigger: GGCCGACGAGTGGAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCGCCTGGAAAACTGCACGGTGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCACCATGTTCCAGCTGTaGGAGCCACAGGCATCCTGC +
Preference number: 5 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGTMFQL*EPQASC
Trigger: GCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGT...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTGGCTCCATCTCATCCTaGATGCTGCCGATGATCTCC +
Preference number: 5 (lower is better)
Translates to: APREATPSDKLVLKTGGPGSISS*MLPMIS
Trigger: GGAGATCATCGGCAGCATCAAGGATGAGATGGAGCC...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp TGGTGTTCCTGCTTCGGCTGGACATGGTCGTGTTGGCCACTTGCATaGCGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAAAGATGGAAT +
Preference number: 5 (lower is better)
Translates to: WCSCFGWTWSCWPLA*RLSASFRAWAQRWN
Trigger: ATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTCCACACACTTCTGTCTaGGGATTTTCCGTCACCTCC +
Preference number: 5 (lower is better)
Translates to: APREATPSDKLVLKTGGPPHTSV*GFSVTS
Trigger: GGAGGTGACGGAAAATCCCAAGACAGAAGTGTGTGG...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCGTTTCGGGTTCATCCTaGACCACACCCTTGGCCACT +
Preference number: 5 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGVSGSS*TTPLAT
Trigger: AGTGGCCAAGGGTGTGGTCAAGGATGAACCCGAAAC...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp TTGCGGATGAAGCCTGAGGGACACTCCTGCATGCACTCATCGTCGTaGATAACGAAGCCATCCGAGTCACTGCTCTCAGCGTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: LRMKPEGHSCMHSSS*ITKPSESLLSALGM
Trigger: CATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCACGACGATGAGTGCATGCAGGAGTGTCCCTCAGGCTTCATCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACTCATCGCCGCAGACTTaGGGGCAGGGGCCTTCGCAG +
Preference number: 5 (lower is better)
Translates to: VREDRPLSQSVTYSVEENSSPQT*GQGPSQ
Trigger: CTGCGAAGGCCCCTGCCCCAAAGTCTGCGGCGATGA...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTCCCAGGGAGGCCACCCCTTCAGACAAGCTGGTTCTAAAGACAGGTGGGCCTGCATCCTTGGAGCATTaGAGCAGAAGTCACCGAATC +
Preference number: 5 (lower is better)
Translates to: APREATPSDKLVLKTGGPASLEH*SRSHRI
Trigger: GATTCGGTGACTTCTGCTCAAATGCTCCAAGGATGC...AGGCCCACCTGTCTTTAGAACCAGCTTGTCTGAAGGGGTGGCCTCCCTGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTGTGAAGACACCATCCTaGAGGGACTCGGGAGACATC +
Preference number: 5 (lower is better)
Translates to: SLPRTSITNSQAESPEPFVKTPS*RDSGDI
Trigger: GATGTCTCCCGAGTCCCTCAAGGATGGTGTCTTCAC...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 90 bp CACAGGAAGCTCGCTCTCCGTTGTTCCTGGTGTTTATGTCCCCTTTaGTCTGGCGTCCCTTGGTTCCGGTCACTTCCTCCATGCGGTAAA +
Preference number: 5 (lower is better)
Translates to: HRKLALRCSWCLCPL*SGVPWFRSLPPCGK
Trigger: TTTACCGCATGGAGGAAGTGACCGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAGGTCGGGGAGGGGGACGAGGCTGGTGTGAGGACCACCTTGACCCACAACCTGACACACAGCTTGGGATaGAAAGCAAAGTACATCTTT +
Preference number: 5 (lower is better)
Translates to: EVGEGDEAGVRTTLTHNLTHSLG*KAKYIF
Trigger: AAAGATGTACTTTGCTTTCAATCCCAAGCTGTGTGT...CAGGTTGTGGGTCAAGGTGGTCCTCACACCAGCCTCGTCCCCCTCCCCGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGGTCGTGTTGGCCACTaGCATGACGTCTCTCCGCCT +
Preference number: 5 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSGRVGH*HDVSPP
Trigger: AGGCGGAGAGACGTCATGCAAGTGGCCAACACGACC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp CAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGACACCTGGACATGGTCGTGTaGGCCACTTGCATGACGTCT +
Preference number: 5 (lower is better)
Translates to: QMPTVDSPASTCSDTFRHLDMVV*ATCMTS
Trigger: AGACGTCATGCAAGTGGCCAACACGACCATGTCCAG...GTGTCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTTTCTCAGCCTCGTGGTaGCAGCTGTGGATATCGATG +
Preference number: 5 (lower is better)
Translates to: SLPRTSITNSQAESPEPFFSASW*QLWISM
Trigger: CATCGATATCCACAGCTGCAACCACGAGGCTGAGAA...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTTGGAGTTTTCGGGTCTaGGCTCCCAGGTCACCGGAC +
Preference number: 5 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSWSFRV*APRSPD
Trigger: GTCCGGTGACCTGGGAGCCAAGACCCGAAAACTCCA...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTATTTTCTGGCAGCGATTaGTGGTCCAGCAGCGGTAGT +
Preference number: 5 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLFSGSD*WSSSGS
Trigger: ACTACCGCTGCTGGACCACAAATCGCTGCCAGAAAA...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGTGAAAGGCCGGAGGTaGGAGATGACAGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSVKGRR*EMTVLS
Trigger: GGAGAGGACTGTCATCTCCAACCTCCGGCCTTTCAC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GCTTCACCTGGGTATGTGGCCTGCGGAGTGGCTGAGGTTACCAGGATCATTGGCGCATACAGCACTCCATaGCCCAACCTGCTGTTATTT +
Preference number: 5 (lower is better)
Translates to: ASPGYVACGVAEVTRIIGAYSTP*PNLLLF
Trigger: AAATAACAGCAGGTTGGGCAATGGAGTGCTGTATGC...GCCAATGATCCTGGTAACCTCAGCCACTCCGCAGGCCACATACCCAGGTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp TCCCAAATGTGTTTACTGCAGAGAAGCCGTCTCCCGTGGGCAGCAATGGCAGGTGACGAAACGAAGAACTaGCTCGTTGGACAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SQMCLLQRSRLPWAAMAGDETKN*LVGQAL
Trigger: CAGGGCTTGTCCAACGAGCAAGTTCTTCGTTTCGTC...ACCTGCCATTGCTGCCCACGGGAGACGGCTTCTCTGCAGTAAACACATTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp TGCTCTCAAAGAAAGGGTACTCTGTCTCGAACTCCTCCGGGTCTGTaGTATTGTAGGTGTCAGCTACCGTGGTGTTCCTGCTTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: CSQRKGTLSRTPPGL*YCRCQLPWCSCFGW
Trigger: CCAGCCGAAGCAGGAACACCACGGTAGCTGACACCTACAATATCACAGACCCGGAGGAGTTCGAGACAGAGTACCCTTTCTTTGAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp CTCCGTTGTTCCTGGTGTTTATGTCCCCTTTGCTCTGGCGTCCCTTaGTTCCGGTCACTTCCTCCATGCGGTAAATTTCGGAGACACACA +
Preference number: 5 (lower is better)
Translates to: LRCSWCLCPLCSGVP*FRSLPPCGKFRRHT
Trigger: TGTGTGTCTCCGAAATTTACCGCATGGAGGAAGTGACCGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp AACGGAGAACATCACTTTCACAGGAAGCTCGCTCTCCGTTGTTCCTaGTGTTTATGTCCCCTTTGCTCTGGCGTCCCTTGGTTCCGGTCA +
Preference number: 5 (lower is better)
Translates to: NGEHHFHRKLALRCS*CLCPLCSGVPWFRS
Trigger: TGACCGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATGTTCTCCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp AGCCAGATGTCACCATGGAGTGCCATCTCTTTGCTGGGTGGCCACACACTGCTACAGGATGGTGCATCCTaGGAGCATTTGAGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: SQMSPWSAISLLGGHTLLQDGAS*EHLSRS
Trigger: ACTTCTGCTCAAATGCTCCAAGGATGCACCATCCTG...TAGCAGTGTGTGGCCACCCAGCAAAGAGATGGCACTCCATGGTGACATCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATTTGCTCTGGCGTCCCTaGGTTCCGGTCACTTCCTCC +
Preference number: 5 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDLLWRP*VPVTSS
Trigger: GGAGGAAGTGACCGGAACCAAGGGACGCCAGAGCAA...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp AACCAAATGCCCACAGTTGACTCCCCAGCCTCCACATGCTCTGACACCTTCAGAGTGTTTATGTCCCCTTaGCTCTGGCGTCCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: NQMPTVDSPASTCSDTFRVFMSP*LWRPLV
Trigger: AACCAAGGGACGCCAGAGCAAAGGGGACATAAACAC...TCTGAAGGTGTCAGAGCATGTGGAGGCTGGGGAGTCAACTGTGGGCATTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp TCTGGCAGCGATTTGTGGTCCAGCAGCGGTAGTTGTACTCATTGTTaGTGGTGGTCTTCTCACACATGGGCTTCTCCTCCAATGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SGSDLWSSSGSCTHC*WWSSHTWASPPMSL
Trigger: CAGGGACATTGGAGGAGAAGCCCATGTGTGAGAAGACCACCATCAACAATGAGTACAACTACCGCTGCTGGACCACAAATCGCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp ATACGTCGTTTTGGCGGGGACATAGAAGAACACAGGATCTGTCCATaGCCCATTCCCAGAGAGGGAGGTAGCCTGAATCCGGGCTGTATA +
Preference number: 5 (lower is better)
Translates to: IRRFGGDIEEHRICP*PIPREGGSLNPGCI
Trigger: TATACAGCCCGGATTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTCTTCTATGTCCCCGCCAAAACGACGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp TCCCTTCCTCGAACATCCATAACCAACAGCCAGGCCGAGTCCCCGGAACCCTTTCCAATATCCTTGAGATaGGTCATCTCGAAGATGACC +
Preference number: 5 (lower is better)
Translates to: SLPRTSITNSQAESPEPFPISLR*VISKMT
Trigger: GGTCATCTTCGAGATGACCAATCTCAAGGATATTGG...AAAGGGTTCCGGGGACTCGGCCTGGCTGTTGGTTATGGATGTTCGAGGAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGGCCTCGTTTACCGTCTaGATGGCCACTCTGGTTTCG +
Preference number: 5 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWASFTV*MATLVS
Trigger: CGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGC...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GTGCGAGAGGATAGGCCACTATCCCAGAGTGTCACCTACAGTGTAGAAGAAAACAGCATATCAGGGCAGTaGTCCGGCTTGTCCAGAAGG +
Preference number: 5 (lower is better)
Translates to: VREDRPLSQSVTYSVEENSISGQ*SGLSRR
Trigger: CCTTCTGGACAAGCCGGACAACTGCCCTGATATGCT...GTTTTCTTCTACACTGTAGGTGACACTCTGGGATAGTGGCCTATCCTCTCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGGGCCATTCTCAGCCTaGTGTCCTGAGTGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSGPFSA*CPECLS
Trigger: TGAAAGACACTCAGGACACAAGGCTGAGAATGGCCC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp TTTCCGTCACCTCCTCCACGTCGATGGTACCATCGGCGTACTTTCTaGTGGGTATTTTGTCTTTGGAGCAGTAGTTGTGCCGGTACAGGT +
Preference number: 5 (lower is better)
Translates to: FPSPPPRRWYHRRTF*WVFCLWSSSCAGTG
Trigger: ACCTGTACCGGCACAACTACTGCTCCAAAGACAAAATACCCATCAGAAAGTACGCCGATGGTACCATCGACGTGGAGGAGGTGACGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 90 bp ACGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAAAGATGGAATTGTaGAGGAAATTCTCAAAGACTTTACGGTACTCAGCCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: TSLRLLSGLGTKMEL*RKFSKTLRYSASSF
Trigger: GAAGGAGGAGGCTGAGTACCGTAAAGTCTTTGAGAATTTCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 90 bp CTTCTCAGCCTGCTTCTCAGCTTCAGTTTTAGGGCAAGCGCAGCATaGCCCTTTATCACCACCACACACTTCTGTCTTGGGATTTTCCGT +
Preference number: 5 (lower is better)
Translates to: LLSLLLSFSFRASAA*PFITTTHFCLGIFR
Trigger: ACGGAAAATCCCAAGACAGAAGTGTGTGGTGGTGATAAAGGGCCATGCTGCGCTTGCCCTAAAACTGAAGCTGAGAAGCAGGCTGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATTCACTGCTCTCAGCGTaGGGGATGTTGGCGCAGAAA +
Preference number: 5 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDSLLSA*GMLAQK
Trigger: TTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGA...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp TCTGCTGCATCCTGGGGACTCAGCAGCTATTGTGTGTGTGTGTGTGTGTGTGAATACAAGATTTCACTTTaGGCCCCACGGATATGGTCG +
Preference number: 5 (lower is better)
Translates to: SAASWGLSSYCVCVCVCEYKISL*APRIWS
Trigger: CGACCATATCCGTGGGGCCAAAAGTGAAATCTTGTA...TTCACACACACACACACACACACAATAGCTGCTGAGTCCCCAGGATGCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTCCTGGGTTTAGACGGTaGAGTTTGGCCCCTCCGTAC +
Preference number: 5 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPPGFRR*SLAPPY
Trigger: GTACGGAGGGGCCAAACTCAACCGTCTAAACCCAGG...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp CCTGCATCTAATCTCCAGTCACAACTGCAACCATCATCATCCAACAGTTTTCCTAAGGAGGGCCGCATCTaGGGGTTATACTGCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PASNLQSQLQPSSSNSFPKEGRI*GLYCQH
Trigger: GTGCTGGCAGTATAACCCCAAGATGCGGCCCTCCTT...AGGAAAACTGTTGGATGATGATGGTTGCAGTTGTGACTGGAGATTAGATGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACTCCTGTATACCACTCCGCCATCTGCTCGTCTCACCGTGATCGCTTTTCTAGTGAAGGGACTGAAGCATaGGTGCGAATGTACAAGATT +
Preference number: 5 (lower is better)
Translates to: TPVYHSAICSSHRDRFSSEGTEA*VRMYKI
Trigger: AATCTTGTACATTCGCACCAATGCTTCAGTCCCTTC...ACTAGAAAAGCGATCACGGTGAGACGAGCAGATGGCGGAGTGGTATACAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGTCCGAGGCAATGTTATaGCCTCTCCGGATGTTAATA +
Preference number: 5 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWSEAML*PLRMLI
Trigger: TATTAACATCCGGAGAGGCAATAACATTGCCTCGGA...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp ACAGGGAACAGTGAGTCCCAGATAATTCCTTTCCCCAGCAAAGGGTTCCAAGATTACCATTGGGCAGAGTaGGAGGATTCCACTTCACAA +
Preference number: 5 (lower is better)
Translates to: TGNSESQIIPFPSKGFQDYHWAE*EDSTSQ
Trigger: TTGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTA...ATCTTGGAACCCTTTGCTGGGGAAAGGAATTATCTGGGACTCACTGTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS-3UTR CAA 90 bp GAAAAATCAGGAAGAGGCGGGGAACATCAGCATGAGATCAGGCTAGAACTGTGGCCGAAATCTCCAATTTaGACTGTGAAATCTTCGGCT +
Preference number: 5 (lower is better)
Translates to: EKSGRGGEHQHEIRLELWPKSPI*TVKSSA
Trigger: AGCCGAAGATTTCACAGTCAAAATTGGAGATTTCGG...CCACAGTTCTAGCCTGATCTCATGCTGATGTTCCCCGCCTCTTCCTGATTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp TCGTCCGGTGTGTGGCAGCTGCCCAGGCACTCCGGGTaGCAGCACTCGTTGTTCTCGGTGCAGGCTCGCTTC +
Preference number: 6 (lower is better)
Translates to: SSGVWQLPRHSG*QHSLFSVQARF
Trigger: GAAGCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp CTGGCGCGGAGAACGAGCACGCCAGGGCCCGGGCCATTCTCAGCCTaGTGTCCTGAGTGTCTTTCAGGCAGAGGCAGGGAGGCTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LARRTSTPGPGPFSA*CPECLSGRGREAEE
Trigger: CTCCTCAGCCTCCCTGCCTCTGCCTGAAAGACACTCAGGACACAAGGCTGAGAATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp AGGTCGAGGACTGGGGCAGAGGCAAGGCCCTCTCGTTaGCGCGTCCCCCGTTCATGTGAGCGTAAGGCTGTC +
Preference number: 6 (lower is better)
Translates to: RSRTGAEARPSR*RVPRSCERKAV
Trigger: GACAGCCTTACGCTCACATGAACGGGGGACGCGCCAACGAGAGGGCCTTGCCTCTGCCCCAGTCCTCGACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp CCACGCAGGTTGTGTTGTCGTCCGGTGTGTGGCAGCTaGCCAGGCACTCCGGGTGGCAGCACTCGTTGTTCT +
Preference number: 6 (lower is better)
Translates to: PRRLCCRPVCGS*PGTPGGSTRCS
Trigger: AGAACAACGAGTGCTGCCACCCGGAGTGCCTGGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp GTGTCAGCTACCGTGGTGTTCCTGCTTCGGCTGGACATGGTCGTGTaGGCCACTTGCATGACGTCTCTCCGCCTCCTTTCGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: VSATVVFLLRLDMVV*ATCMTSLRLLSGLG
Trigger: GCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGTAGCTGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp CCAGGCACTCCGGGTGGCAGCACTCGTTGTTCTCGGTaGAGGCTCGCTTCCCGCACACACTTGGGCACATTT +
Preference number: 6 (lower is better)
Translates to: PGTPGGSTRCSR*RLASRTHLGTF
Trigger: AAATGTGCCCAAGTGTGTGCGGGAAGCGAGCCTGCACCGAGAACAACGAGTGCTGCCACCCGGAGTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp TTCCTGCTTCGGCTGGACATGGTCGTGTTGGCCACTTaGATGACGTCTCTCCGCCTCCTTTCGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: FLLRLDMVVLAT*MTSLRLLSGLG
Trigger: GCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp GTTCCTGCTTCGGCTGGACATGGTCGTGTTGGCCACTaGCATGACGTCTCTCCGCCTCCTTTCGGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: VPASAGHGRVGH*HDVSPPPFGPG
Trigger: CCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 72 bp TGCTTCGGCTGGACATGGTCGTGTTGGCCACTTGCATaGCGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAA +
Preference number: 6 (lower is better)
Translates to: CFGWTWSCWPLA*RLSASFRAWAQ
Trigger: TTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp AGCCATCCGAGTCACTGCTCTCAGCGTTGGGGATGTTaGCGCAGAAATCGCGATCCACACAGCGCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: SHPSHCSQRWGC*RRNRDPHSASP
Trigger: AGGGCTGGCGCTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp CGTTCATGTGAGCGTAAGGCTGTCTCTCATCAAAACTaGCGCGGAGAACGAGCACGCCAGGGCCCGGGCCAT +
Preference number: 6 (lower is better)
Translates to: RSCERKAVSHQN*RGERARQGPGH
Trigger: ATGGCCCGGGCCCTGGCGTGCTCGTTCTCCGCGCCAGTTTTGATGAGAGACAGCCTTACGCTCACATGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp CGCCTTTGTAGTAGTAGTGTCTGCAGGCCACGCAGGTaGTGTTGTCGTCCGGTGTGTGGCAGCTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: RLCSSSVCRPRR*CCRPVCGSCPG
Trigger: GCCTGGGCAGCTGCCACACACCGGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp AAGCCATCCGAGTCACTGCTCTCAGCGTTGGGGATGTaGGCGCAGAAATCGCGATCCACACAGCGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: KPSESLLSALGM*AQKSRSTQRQP
Trigger: GGGCTGGCGCTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp GGCGCTTCAGCTGCTGATAGTCGTTGCGGATGTCAATaGCGGGCCCACAGATTTCTCCACTCGTCGGCCAGA +
Preference number: 6 (lower is better)
Translates to: GASAADSRCGCQ*RAHRFLHSSAR
Trigger: TCTGGCCGACGAGTGGAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp ACCGTGGTGTTCCTGCTTCGGCTGGACATGGTCGTGTaGGCCACTTGCATGACGTCTCTCCGCCTCCTTTCG +
Preference number: 6 (lower is better)
Translates to: TVVFLLRLDMVV*ATCMTSLRLLS
Trigger: CGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp AAGGAGACCTCCTGGAAGCTGGGCTCCATCTCATCCTaGATGCTGCCGATGATCTCCAGGAAGGAGGGCCGC +
Preference number: 6 (lower is better)
Translates to: KETSWKLGSISS*MLPMISRKEGR
Trigger: GCGGCCCTCCTTCCTGGAGATCATCGGCAGCATCAAGGATGAGATGGAGCCCAGCTTCCAGGAGGTCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp TGGATAACGAAGCCATCCGAGTCACTGCTCTCAGCGTTGGGGATGTaGGCGCAGAAATCGCGATCCACACAGCGCCAGCCCTCGAACCTG +
Preference number: 6 (lower is better)
Translates to: WITKPSESLLSALGM*AQKSRSTQRQPSNL
Trigger: CAGGTTCGAGGGCTGGCGCTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp TCATCGTCGTGGATAACGAAGCCATCCGAGTCACTGCTCTCAGCGTaGGGGATGTTGGCGCAGAAATCGCGATCCACACAGCGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: SSSWITKPSESLLSA*GMLAQKSRSTQRQP
Trigger: GGGCTGGCGCTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCACGACGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp TACCGTGGTGTTCCTGCTTCGGCTGGACATGGTCGTGTTGGCCACTaGCATGACGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAAAGAT +
Preference number: 6 (lower is better)
Translates to: YRGVPASAGHGRVGH*HDVSPPPFGPGHKD
Trigger: ATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACGTCATGCAAGTGGCCAACACGACCATGTCCAGCCGAAGCAGGAACACCACGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp GTCCAGGGCTTCAGCCCATGCAGTAAAATGCCAGGCTCGCCCTCCTaGTTCGGAGGCAGGTCTACATCCACCATGTTCCAGCTGTTGGAG +
Preference number: 6 (lower is better)
Translates to: VQGFSPCSKMPGSPS*FGGRSTSTMFQLLE
Trigger: CTCCAACAGCTGGAACATGGTGGATGTAGACCTGCCTCCGAACAAGGAGGGCGAGCCTGGCATTTTACTGCATGGGCTGAAGCCCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp CATACTGGGTCCAGGGCTTCAGCCCATGCAGTAAAATaGCAGGCTCGCCCTCCTTGTTCGGAGGCAGGTCTA +
Preference number: 6 (lower is better)
Translates to: HTGSRASAHAVK*QARPPCSEAGL
Trigger: TAGACCTGCCTCCGAACAAGGAGGGCGAGCCTGGCATTTTACTGCATGGGCTGAAGCCCTGGACCCAGTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp GCTCGCTCTCCGTTGTTCCTGGTGTTTATGTCCCCTTaGCTCTGGCGTCCCTTGGTTCCGGTCACTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ARSPLFLVFMSP*LWRPLVPVTSS
Trigger: GGAGGAAGTGACCGGAACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp AGGCAGGCACACACACGCCTTTGTAGTAGTAGTGTCTaGAGGCCACGCAGGTTGTGTTGTCGTCCGGTGTGT +
Preference number: 6 (lower is better)
Translates to: RQAHTRLCSSSV*RPRRLCCRPVC
Trigger: ACACACCGGACGACAACACAACCTGCGTGGCCTGCAGACACTACTACTACAAAGGCGTGTGTGTGCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp TGGGTGCTGTTGCGGATGAAGCCTGAGGGACACTCCTaGATGCACTCATCGTCGTGGATAACGAAGCCATCC +
Preference number: 6 (lower is better)
Translates to: WVLLRMKPEGHS*MHSSSWITKPS
Trigger: GGATGGCTTCGTTATCCACGACGATGAGTGCATGCAGGAGTGTCCCTCAGGCTTCATCCGCAACAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp GGTCTTCTCACACATGGGCTTCTCCTCCAATGTCCCTaGACACAGGTCCCCACATTCCTTCGGGGGCTTGTT +
Preference number: 6 (lower is better)
Translates to: GLLTHGLLLQCP*TQVPTFLRGLV
Trigger: AACAAGCCCCCGAAGGAATGTGGGGACCTGTGTCCAGGGACATTGGAGGAGAAGCCCATGTGTGAGAAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp AAGCCTGAGGGACACTCCTGCATGCACTCATCGTCGTaGATAACGAAGCCATCCGAGTCACTGCTCTCAGCG +
Preference number: 6 (lower is better)
Translates to: KPEGHSCMHSSS*ITKPSESLLSA
Trigger: CGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCACGACGATGAGTGCATGCAGGAGTGTCCCTCAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp TGCAGTTTTCCAGGCGCTTCAGCTGCTGATAGTCGTTaGGGATGTCAATGCCGGGCCCACAGATTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: CSFPGASAADSR*GCQCRAHRFLH
Trigger: GTGGAGAAATCTGTGGGCCCGGCATTGACATCCGCAACGACTATCAGCAGCTGAAGCGCCTGGAAAACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp TCTTGGCTCCCAGGTCACCGGACCAGGGATATCATCTaGTCCTTCTGCTGGCATGGTTCTCGCAAAGACGAA +
Preference number: 6 (lower is better)
Translates to: SWLPGHRTRDII*SFCWHGSRKDE
Trigger: TTCGTCTTTGCGAGAACCATGCCAGCAGAAGGAGCAGATGATATCCCTGGTCCGGTGACCTGGGAGCCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp AAGTACATCTTTCCGGACCTGACGGTCAGGTTCCGGTaGTTCCAGTCCCACAGCTGCTGCAAGTTCTGGTTG +
Preference number: 6 (lower is better)
Translates to: KYIFPDLTVRFR*FQSHSCCKFWL
Trigger: CAACCAGAACTTGCAGCAGCTGTGGGACTGGAACCACCGGAACCTGACCGTCAGGTCCGGAAAGATGTACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp TGGATAACGAAGCCATCCGAGTCACTGCTCTCAGCGTaGGGGATGTTGGCGCAGAAATCGCGATCCACACAG +
Preference number: 6 (lower is better)
Translates to: WITKPSESLLSA*GMLAQKSRSTQ
Trigger: CTGTGTGGATCGCGATTTCTGCGCCAACATCCCCAACGCTGAGAGCAGTGACTCGGATGGCTTCGTTATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 72 bp GAATCCGGGCTGTATAGTTCCCTGGGTTTAGACGGTTaGGTTTGGCCCCTCCGTACTTCCTGTACTCCTGTC +
Preference number: 6 (lower is better)
Translates to: ESGLYSSLGLDG*VWPLRTSCTPV
Trigger: GACAGGAGTACAGGAAGTACGGAGGGGCCAAACTCAACCGTCTAAACCCAGGGAACTATACAGCCCGGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 72 bp TTTGGCGGGGACATAGAAGAACACAGGATCTGTCCATaGCCCATTCCCAGAGAGGGAGGTAGCCTGAATCCG +
Preference number: 6 (lower is better)
Translates to: FGGDIEEHRICP*PIPREGGSLNP
Trigger: CGGATTCAGGCTACCTCCCTCTCTGGGAATGGGTCATGGACAGATCCTGTGTTCTTCTATGTCCCCGCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp CATCACTTTCACAGGAAGCTCGCTCTCCGTTGTTCCTaGTGTTTATGTCCCCTTTGCTCTGGCGTCCCTTGG +
Preference number: 6 (lower is better)
Translates to: HHFHRKLALRCS*CLCPLCSGVPW
Trigger: CCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp CACATGCGCATAAGTTCAAACAGCATATCAGGGCAGTaGTCCGGCTTGTCCAGAAGGCCACCCTCCATGACG +
Preference number: 6 (lower is better)
Translates to: HMRISSNSISGQ*SGLSRRPPSMT
Trigger: CGTCATGGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACTTATGCGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 72 bp AGAAAGGGTACTCTGTCTCGAACTCCTCCGGGTCTGTaGTATTGTAGGTGTCAGCTACCGTGGTGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: RKGTLSRTPPGL*YCRCQLPWCSC
Trigger: GCAGGAACACCACGGTAGCTGACACCTACAATATCACAGACCCGGAGGAGTTCGAGACAGAGTACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp CTGCTTCTCAGCTTCAGTTTTAGGGCAAGCGCAGCATaGCCCTTTATCACCACCACACACTTCTGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: LLLSFSFRASAA*PFITTTHFCLG
Trigger: CCCAAGACAGAAGTGTGTGGTGGTGATAAAGGGCCATGCTGCGCTTGCCCTAAAACTGAAGCTGAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp CGGAGAACATCACTTTCACAGGAAGCTCGCTCTCCGTaGTTCCTGGTGTTTATGTCCCCTTTGCTCTGGCGT +
Preference number: 6 (lower is better)
Translates to: RRTSLSQEARSP*FLVFMSPLLWR
Trigger: ACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATGTTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp GAGGTGAAACGGAGAACATCACTTTCACAGGAAGCTCGCTCTCCGTaGTTCCTGGTGTTTATGTCCCCTTTGCTCTGGCGTCCCTTGGTT +
Preference number: 6 (lower is better)
Translates to: EVKRRTSLSQEARSP*FLVFMSPLLWRPLV
Trigger: AACCAAGGGACGCCAGAGCAAAGGGGACATAAACACCAGGAACAACGGAGAGCGAGCTTCCTGTGAAAGTGATGTTCTCCGTTTCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp CACATGCGCATAAGTTCAAACAGCATATCAGGGCAGTTGTCCGGCTaGTCCAGAAGGCCACCCTCCATGACGAAACGAAGAACTTGCTCG +
Preference number: 6 (lower is better)
Translates to: HMRISSNSISGQLSG*SRRPPSMTKRRTCS
Trigger: CGAGCAAGTTCTTCGTTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACTTATGCGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp TTGCAGCTGTGGATATCGATGCGGTACAGAGTGAAAGGCCGGAGGTaGGAGATGACAGTCCTCTCCTTGTTATCCACTCTGCTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: LQLWISMRYRVKGRR*EMTVLSLLSTLLSK
Trigger: CTTTGAGAGCAGAGTGGATAACAAGGAGAGGACTGTCATCTCCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCACAGCTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp TCCACCATGTTCCAGCTGTTGGAGCCACAGGCATCCTaGCCGTCATATTCCGTAACGTTTTTAAATGGTGCC +
Preference number: 6 (lower is better)
Translates to: STMFQLLEPQAS*PSYSVTFLNGA
Trigger: GGCACCATTTAAAAACGTTACGGAATATGACGGGCAGGATGCCTGTGGCTCCAACAGCTGGAACATGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp GGCCTCGTTGAGAAACTCGATTCTTTCACGCATACTTaGAGCCTCGTTTACCGTCTTGATGGCCACTCTGGT +
Preference number: 6 (lower is better)
Translates to: GLVEKLDSFTHT*SLVYRLDGHSG
Trigger: ACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAATCGAGTTTCTCAACGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp TGGATATCGATGCGGTACAGAGTGAAAGGCCGGAGGTaGGAGATGACAGTCCTCTCCTTGTTATCCACTCTG +
Preference number: 6 (lower is better)
Translates to: WISMRYRVKGRR*EMTVLSLLSTL
Trigger: CAGAGTGGATAACAAGGAGAGGACTGTCATCTCCAACCTCCGGCCTTTCACTCTGTACCGCATCGATATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp AGAAACTCGATTCTTTCACGCATACTTGCAGCCTCGTTTACCGTCTaGATGGCCACTCTGGTTTCGGGTTCATCCTTGACCACACCCTTG +
Preference number: 6 (lower is better)
Translates to: RNSILSRILAASFTV*MATLVSGSSLTTPL
Trigger: CAAGGGTGTGGTCAAGGATGAACCCGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAATCGAGTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp CGTCTCTCCGCCTCCTTTCGGGCCTGGGCACAAAGATaGAATTGTGAAGGAAATTCTCAAAGACTTTACGGT +
Preference number: 6 (lower is better)
Translates to: RLSASFRAWAQR*NCEGNSQRLYG
Trigger: ACCGTAAAGTCTTTGAGAATTTCCTTCACAATTCCATCTTTGTGCCCAGGCCCGAAAGGAGGCGGAGAGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp ATTCTTTCACGCATACTTGCAGCCTCGTTTACCGTCTaGATGGCCACTCTGGTTTCGGGTTCATCCTTGACC +
Preference number: 6 (lower is better)
Translates to: ILSRILAASFTV*MATLVSGSSLT
Trigger: GGTCAAGGATGAACCCGAAACCAGAGTGGCCATCAAGACGGTAAACGAGGCTGCAAGTATGCGTGAAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp ATAAGTTCAAACAGCATATCAGGGCAGTTGTCCGGCTaGTCCAGAAGGCCACCCTCCATGACGAAACGAAGA +
Preference number: 6 (lower is better)
Translates to: ISSNSISGQLSG*SRRPPSMTKRR
Trigger: TCTTCGTTTCGTCATGGAGGGTGGCCTTCTGGACAAGCCGGACAACTGCCCTGATATGCTGTTTGAACTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp ATGGAAGGGACTGAAGCATTGGTGCGAATGTACAAGATTTCACTTTaGGCCCCACGGATATGGTCGTTTTCCACCATGGTGAGGGTCACA +
Preference number: 6 (lower is better)
Translates to: MEGTEALVRMYKISL*APRIWSFSTMVRVT
Trigger: TGTGACCCTCACCATGGTGGAAAACGACCATATCCGTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGTCCCTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp GCAGAGTTGGAGGATTCCACTTCACAATCAGCTGAGAGGAAGAGTTaGATGCTGAGAGGACATCTAGGGGAATGGAAGGGACTGAAGCAT +
Preference number: 6 (lower is better)
Translates to: AELEDSTSQSAERKS*MLRGHLGEWKGLKH
Trigger: ATGCTTCAGTCCCTTCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGATTGTGAAGTGGAATCCTCCAACTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS TCA 72 bp CAGCCATCTGGATCATCTTGCTTAAGCTCGGAGGAATaGGGACTAGATTATTCTGCTCCACTTCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: QPSGSSCLSSEE*GLDYSAPLLAS
Trigger: TGAGGCCAGAAGTGGAGCAGAATAATCTAGTCCTCATTCCTCCGAGCTTAAGCAAGATGATCCAGATGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp GAGGATTCCACTTCACAATCAGCTGAGAGGAAGAGTTaGATGCTGAGAGGACATCTAGGGGAATGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: EDSTSQSAERKS*MLRGHLGEWKG
Trigger: TCCCTTCCATTCCCCTAGATGTCCTCTCAGCATCAAACTCTTCCTCTCAGCTGATTGTGAAGTGGAATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 90 bp GCTGCCACCTCACAATGTAGTAACTCAAGTTACCATTGGGCAGAGTaGGAGGATTCCACTTCACAATCAGCTGAGAGGAAGAGTTTGATG +
Preference number: 6 (lower is better)
Translates to: AATSQCSNSSYHWAE*EDSTSQSAERKSLM
Trigger: CATCAAACTCTTCCTCTCAGCTGATTGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CCA 72 bp GCTGCCACCTCACAATGTAGTAACTCAAGTTACCATTaGGCAGAGTTGGAGGATTCCACTTCACAATCAGCT +
Preference number: 6 (lower is better)
Translates to: AATSQCSNSSYH*AELEDSTSQSA
Trigger: AGCTGATTGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGAGGTGGCAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp ACTGAAGCATTGGTGCGAATGTACAAGATTTCACTTTaGGCCCCACGGATATGGTCGTTTTCCACCATGGTG +
Preference number: 6 (lower is better)
Translates to: TEALVRMYKISL*APRIWSFSTMV
Trigger: CACCATGGTGGAAAACGACCATATCCGTGGGGCCAAAAGTGAAATCTTGTACATTCGCACCAATGCTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS GCA 72 bp AATACTCGGGGTTCACAGAAGCATACAGCACTCCATTaGCCAACCTGCTGTTATTTCTCTTTCTATGGAAGA +
Preference number: 6 (lower is better)
Translates to: NTRGSQKHTALH*PTCCYFSFYGR
Trigger: TCTTCCATAGAAAGAGAAATAACAGCAGGTTGGGCAATGGAGTGCTGTATGCTTCTGTGAACCCCGAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp TCACAATGTAGTAACTCAAGTTACCATTGGGCAGAGTaGGAGGATTCCACTTCACAATCAGCTGAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: SQCSNSSYHWAE*EDSTSQSAERK
Trigger: CTTCCTCTCAGCTGATTGTGAAGTGGAATCCTCCAACTCTGCCCAATGGTAACTTGAGTTACTACATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10
CDS CAA 72 bp GACCCGTATTTAATTTCATACATTAGGATCAATCCGTaGGGGTTCTCGGGTTCTGGCCACTTTAAAAAGATG +
Preference number: 6 (lower is better)
Translates to: DPYLISYIRINP*GFSGSGHFKKM
Trigger: CATCTTTTTAAAGTGGCCAGAACCCGAGAACCCCAACGGATTGATCCTAATGTATGAAATTAAATACGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000005671.10