Pregenerated sensors for IGF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020053Ensembl transcript IDs: ENSMUST00000062862.13, ENSMUST00000095360.11, ENSMUST00000105300.9, ENSMUST00000121161.8, ENSMUST00000121952.8, ENSMUST00000122100.3, ENSMUST00000122386.8, ENSMUST00000126490.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACTGCCTTGCTTCAGCTCCTCTGCGGCTTTCCTGGGCTCCTGTCTaGTCCTTCTTCATCCCTGTTCCCGCACGTCCTTCATCCCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: DCLASAPLRLSWAPV*SFFIPVPARPSSLF Trigger: GAACAGGGATGAAGGACGTGCGGGAACAGGGATGAAGAAGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR GCA 90 bp | CAGACATTATCTAGCTTAGTGAGGACTGCCTTGCTTCAGCTCCTCTaGGGCTTTCCTGGGCTCCTGTCTGCTCCTTCTTCATCCCTGTTC | + |
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Preference number: 1 (lower is better) Translates to: QTLSSLVRTALLQLL*GFPGLLSAPSSSLF Trigger: GAACAGGGATGAAGAAGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTCCTCACTAAGCTAGATAATGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR CCA 90 bp | TCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTaGGAGGCTCCTCCTACATTCTGTAGGTCTTGTTTCCTGCACTTC | + |
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Preference number: 1 (lower is better) Translates to: SSSKGSCGDVAFSAP*EAPPTFCRSCFLHF Trigger: GAAGTGCAGGAAACAAGACCTACAGAATGTAGGAGGAGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
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| 3UTR GCA 90 bp | CATTGGCGTAGCTGGCCAAACAGTAAAGGGGAAAGCAAAACAGGCTaGATCCTGTCTTCTGCGCATCCTCCCAAGTGCACAAACCATAAA | + |
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Preference number: 1 (lower is better) Translates to: HWRSWPNSKGESKTG*ILSSAHPPKCTNHK Trigger: TTTATGGTTTGTGCACTTGGGAGGATGCGCAGAAGACAGGATGCAGCCTGTTTTGCTTTCCCCTTTACTGTTTGGCCAGCTACGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | GAGATCCATGTCTACTCTAGGAGACTGGTCACTCTTTCAGGTCACTaGTGGAAGAGCAACCTCTACAAAACAAGAAATCAGTGCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: EIHVYSRRLVTLSGH*WKSNLYKTRNQCLL Trigger: GAGAAGGCACTGATTTCTTGTTTTGTAGAGGTTGCTCTTCCATCAGTGACCTGAAAGAGTGACCAGTCTCCTAGAGTAGACATGGATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | GTTGTTATTGTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTaGGGTGTTACACTTCCCCGTACCATTCTTCCCATGTGTAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: VVIVVDVPSWSLVTF*GVTLPRTILPMCKC Trigger: GCACTTACACATGGGAAGAATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR TCA 90 bp | CTCCCAAGTGCACAAACCATAAAGAAACCCTGGAGCCATAGGGTATaGGATGGTTTCATGTACACAGACATGCCACATTTCACATTGACA | + |
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Preference number: 1 (lower is better) Translates to: LPSAQTIKKPWSHRV*DGFMYTDMPHFTLT Trigger: TGTCAATGTGAAATGTGGCATGTCTGTGTACATGAAACCATCTCATACCCTATGGCTCCAGGGTTTCTTTATGGTTTGTGCACTTGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CCA 90 bp | GTCAAGTACTTTCTTAAAGAAACAATAGCACCACATTGGCGTAGCTaGCCAAACAGTAAAGGGGAAAGCAAAACAGGCTGCATCCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: VKYFLKETIAPHWRS*PNSKGESKTGCILS Trigger: AGACAGGATGCAGCCTGTTTTGCTTTCCCCTTTACTGTTTGGCCAGCTACGCCAATGTGGTGCTATTGTTTCTTTAAGAAAGTACTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | GTGGTGAGTTTGTGTGACCCAGGTTGCAAATACTTACTTCTTCAGTaGTTAAAAAGAAACCAGGACTCCCAAATCCCTAGCCTCTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: VVSLCDPGCKYLLLQ*LKRNQDSQIPSLLL Trigger: AAGCAAGAGGCTAGGGATTTGGGAGTCCTGGTTTCTTTTTAATCACTGAAGAAGTAAGTATTTGCAACCTGGGTCACACAAACTCACCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | TGGGTTATTTACAGAATTCCTTGCATCCTAGCAATTCAAGGGTTCTaGTGTTGCACCCTCCTGGAAACCCAGAACAAAAATCTGAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: WVIYRIPCILAIQGF*CCTLLETQNKNLKV Trigger: GACCTTCAGATTTTTGTTCTGGGTTTCCAGGAGGGTGCAACATCAGAACCCTTGAATTGCTAGGATGCAAGGAATTCTGTAAATAACCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CCA 90 bp | TACTTCTGTCTTCTCCTAATGAGATCCATGTCTACTCTAGGAGACTaGTCACTCTTTCAGGTCACTGATGGAAGAGCAACCTCTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: YFCLLLMRSMSTLGD*SLFQVTDGRATSTK Trigger: TTTTGTAGAGGTTGCTCTTCCATCAGTGACCTGAAAGAGTGACCAGTCTCCTAGAGTAGACATGGATCTCATTAGGAGAAGACAGAAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | CTATGTGTTTTTCTGGGAATTACCAATTTGAAAAAGTACACACTGTaGACAAGAACTAGAAGTCAGAAGTGTCACCCAGGGTGTGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: LCVFLGITNLKKYTL*TRTRSQKCHPGCVR Trigger: CCTCACACACCCTGGGTGACACTTCTGACTTCTAGTTCTTGTTCACAGTGTGTACTTTTTCAAATTGGTAATTCCCAGAAAAACACATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | AGCAACCTCTACAAAACAAGAAATCAGTGCCTTCTCCAGAGGATGTaGCAGAAGCTGGTTCTAGTAGTAGGTAAGTCTATGCTCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: SNLYKTRNQCLLQRM*QKLVLVVGKSMLLK Trigger: TTTTAAGAGCATAGACTTACCTACTACTAGAACCAGCTTCTGTCACATCCTCTGGAGAAGGCACTGATTTCTTGTTTTGTAGAGGTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR GCA 90 bp | TCTTATTCCATTTACATTTCTACAGTAATCAGGGGATGTACAGCGTaGCTGATGTTCCTAAATCCAATCCTTCTGAGGGCTTTACTCAAC | + |
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Preference number: 1 (lower is better) Translates to: SYSIYISTVIRGCTA*LMFLNPILLRALLN Trigger: GTTGAGTAAAGCCCTCAGAAGGATTGGATTTAGGAACATCAGGCACGCTGTACATCCCCTGATTACTGTAGAAATGTAAATGGAATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | GATCTGGAGAAGGCCACCTATGTGTTTTTCTGGGAATTACCAATTTaGAAAAGTACACACTGTGAACAAGAACTAGAAGTCAGAAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: DLEKATYVFFWELPI*KSTHCEQELEVRSV Trigger: GACACTTCTGACTTCTAGTTCTTGTTCACAGTGTGTACTTTTTCAAATTGGTAATTCCCAGAAAAACACATAGGTGGCCTTCTCCAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR GCA 90 bp | TTTAAGGATACAGAGACACCGATAGGAGATATGGATGGAGCCTCCTaGCAAGTGTTTAGCAGTAGGTACAATGTAAATATTCAAACGAAA | + |
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Preference number: 1 (lower is better) Translates to: FKDTETPIGDMDGAS*QVFSSRYNVNIQTK Trigger: TTTCGTTTGAATATTTACATTGTACCTACTGCTAAACACTTGGCAGGAGGCTCCATCCATATCTCCTATCGGTGTCTCTGTATCCTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR TCA 90 bp | CATAGAGAACATTTTTCTAAATGTTTTTGGTTAGCAATGCCCAGTTaGATGCATCCAACACATTTCCAGGAAGCTGGATCCTTCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: HREHFSKCFWLAMPS*MHPTHFQEAGSFLL Trigger: TAGAAGGAAGGATCCAGCTTCCTGGAAATGTGTTGGATGCATTCAACTGGGCATTGCTAACCAAAAACATTTAGAAAAATGTTCTCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGAATCACCAAATCCAACCATGGCAGGAAGCCCACAGATCTGGAGAAGGGAGGTCACAGGGTGGTaGGTTTGTGTGACCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HLESPNPTMAGSPQIWRREVTGW*VCVTQV Trigger: AACCTGGGTCACACAAACTCACCACCCTGTGACCTC...CCTTCTCCAGATCTGTGGGCTTCCTGCCATGGTTGGATTTGGTGATTCCAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR TCA 90 bp | CTTCTGCGCATCCTCCCAAGTGCACAAACCATAAAGAAACCCTGGAGCCATAGGGCAGATGAGGAAAACTaGGGCACCGAGAGGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: LLRILPSAQTIKKPWSHRADEEN*GTERWS Trigger: ACTCCACCTCTCGGTGCCTCAGTTTTCCTCATCTGC...CCTATGGCTCCAGGGTTTCTTTATGGTTTGTGCACTTGGGAGGATGCGCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CAA 90 bp | TTCTTACTTCCGTCACAGACATTATCTAGCTTAGTGAGGACTGCCTaGCTTCAGCTCCTCTGCGGCTTTCCTGGGCTCCTGTCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLLPSQTLSSLVRTA*LQLLCGFPGLLSAP Trigger: AGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTCCTCACTAAGCTAGATAATGTCTGTGACGGAAGTAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGGATCCTGCGGTGATGTaGCATTTTCTGCTCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: RCFDVLQVAQAAKDPAVMDPAVM*HFLLRG Trigger: CCCACGGAGCAGAAAATGCCACATCACCGCAGGATC...CATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGATCCTGCGGTGATGTaGCATTTTCTGCTCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: CFAGCSSSKGSCGDVAFSDPAVM*HFLLRG Trigger: CCCACGGAGCAGAAAATGCCACATCACCGCAGGATC...AGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTaGGAGGCTCCTCCTACATTC | + |
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Preference number: 2 (lower is better) Translates to: VFRCFAGCSSSKGSCGDVAFSAP*EAPPTF Trigger: GAATGTAGGAGGAGCCTCCCACGGAGCAGAAAATGC...CACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
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| 3UTR-3UTR CCA 90 bp | TATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGGATCCTGCGGTGATGTaGCATTTTCTGCTCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YLVGVSMFCRLLKQQRILDPAVM*HFLLRG Trigger: CCCACGGAGCAGAAAATGCCACATCACCGCAGGATC...CAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR CAA 90 bp | AGCTGGATCCTTCCTTCTAAGCAGACACTAGGGAGAACCTCAGGCTaGAGAAGGAAGAATTTTGCCCCTCAAGTAGCAATTCTTGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SWILPSKQTLGRTSG*RRKNFAPQVAILAS Trigger: GCTAGCAAGAATTGCTACTTGAGGGGCAAAATTCTTCCTTCTCAAGCCTGAGGTTCTCCCTAGTGTCTGCTTAGAAGGAAGGATCCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR CCA 90 bp | TTGCCCCCAGTTCAAGTTATTGACCAACACTTCAGATTGGGTGAAGTATTGCCAGGGGAAGCAGGTGGATaGTCAGCTGACCTCTTATTC | + |
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Preference number: 2 (lower is better) Translates to: LPPVQVIDQHFRLGEVLPGEAGG*SADLLF Trigger: GAATAAGAGGTCAGCTGACCATCCACCTGCTTCCCC...TGGCAATACTTCACCCAATCTGAAGTGTTGGTCAATAACTTGAACTGGGGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR CCA 90 bp | ACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGGATCCTGCGGTGATGTaGCATTTTCTGCTCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: TYYCYLVGVSMFCRLLKQDPAVM*HFLLRG Trigger: CCCACGGAGCAGAAAATGCCACATCACCGCAGGATC...CTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR-3UTR CCA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAGATCCTGCGGTGATGTaGCATTTTCTGCTCCGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLLLFGRCFDVLQVAQAADPAVM*HFLLRG Trigger: CCCACGGAGCAGAAAATGCCACATCACCGCAGGATC...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR CAA 90 bp | ATGATCCTTGGAGCTACATTGTTAGTGGGTTATTTACAGAATTCCTaGCATCCTAGCAATTCAAGGGTTCTGATGTTGCACCCTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: MILGATLLVGYLQNS*HPSNSRVLMLHPPG Trigger: TCCAGGAGGGTGCAACATCAGAACCCTTGAATTGCTAGGATGCAAGGAATTCTGTAAATAACCCACTAACAATGTAGCTCCAAGGATCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGGTGGATGGTCAGCTGACCTCTTATTCCATTTACATTTCTACAGTAATCCATCCCAGTGACAGATaGATGATCCTTGGAGCTACA | + |
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Preference number: 2 (lower is better) Translates to: KQVDGQLTSYSIYISTVIHPSDR*MILGAT Trigger: TGTAGCTCCAAGGATCATTCATCTGTCACTGGGATG...GATTACTGTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTGGATGGTCAGCTGACCTCTTATTCCATTTACATTTCTACAGTAATCAGAAATCCCTAGCCTCTTaGTTTTCCCACTCCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: AGGWSADLLFHLHFYSNQKSLAS*FSHSIA Trigger: AGCTATGGAGTGGGAAAAGCAAGAGGCTAGGGATTT...CTGATTACTGTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR GCA 90 bp | TTGCCCCCAGTTCAAGTTATTGACCAACACTTCAGATTGGGTGAAGTATTGCCATTGTGTGACCCAGGTTaGAAATACTTACTTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LPPVQVIDQHFRLGEVLPLCDPG*KYLLLQ Trigger: CTGAAGAAGTAAGTATTTGCAACCTGGGTCACACAA...TGGCAATACTTCACCCAATCTGAAGTGTTGGTCAATAACTTGAACTGGGGGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGGTGGATGGTCAGCTGACCTCTTATTCCATTTACATTTCTACAGTAATCCTCAACAGCACCTTCTaGATTTCCCCAGAGATTCTA | + |
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Preference number: 2 (lower is better) Translates to: KQVDGQLTSYSIYISTVILNSTF*ISPEIL Trigger: TAGAATCTCTGGGGAAATGCAGAAGGTGCTGTTGAG...GATTACTGTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGGTGGATGGTCAGCTGACCTCTTATTCCATTTACATTTCTACAGTAATCACATTTCCAGGAAGCTaGATCCTTCCTTCTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: KQVDGQLTSYSIYISTVITFPGS*ILPSKQ Trigger: CTGCTTAGAAGGAAGGATCCAGCTTCCTGGAAATGT...GATTACTGTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CAA 90 bp | ATGTTATTGGACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTaGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: MLLDLLLLFGRCFDV*QVAQAAKDPAVMWH Trigger: ATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGTCCAATAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR CAA 90 bp | CTAATGCAGCTAGACAAGATGATTAGACTCTGTAAAACAAGCAGCTaGAGCTACGTGGGAAGAGGTGAAGATAAGGGAACCATTCATAAA | + |
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Preference number: 2 (lower is better) Translates to: LMQLDKMIRLCKTSS*SYVGRGEDKGTIHK Trigger: TTTATGAATGGTTCCCTTATCTTCACCTCTTCCCACGTAGCTCAAGCTGCTTGTTTTACAGAGTCTAATCATCTTGTCTAGCTGCATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
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| 3UTR CAA 90 bp | CCCCCAGTTCAAGTTATTGACCAACACTTCAGATTGGGTGAAGTATaGCCAATTTTGTTAAATTTGAGAGCCAATGAAATGATTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PPVQVIDQHFRLGEV*PILLNLRANEMIEP Trigger: TGGCTCAATCATTTCATTGGCTCTCAAATTTAACAAAATTGGCAATACTTCACCCAATCTGAAGTGTTGGTCAATAACTTGAACTGGGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CAA 90 bp | TCATTGGGGGAAATGCCCATCTTTGTAATGTTATTGGACTTATTATaGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: SLGEMPIFVMLLDLL*LFGRCFDVLQVAQA Trigger: TGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGTCCAATAACATTACAAAGATGGGCATTTCCCCCAATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR GCA 72 bp | GCTTCAGCTCCTCTGCGGCTTTCCTGGGCTCCTGTCTaGTCCTTCTTCATCCCTGTTCCCGCACGTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: ASAPLRLSWAPV*SFFIPVPARPS Trigger: TGAAGGACGTGCGGGAACAGGGATGAAGAAGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR TCA 72 bp | TTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTaGTGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: FCRLLKQQRILR*CGIFCSVGGSS Trigger: GGAGGAGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
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| 3UTR GCA 72 bp | TCTAGCTTAGTGAGGACTGCCTTGCTTCAGCTCCTCTaGGGCTTTCCTGGGCTCCTGTCTGCTCCTTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: SSLVRTALLQLL*GFPGLLSAPSS Trigger: TGAAGAAGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTCCTCACTAAGCTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR GCA 72 bp | CGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTaGGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: RCFAGCSSSKGS*GDVAFSAPWEA Trigger: AGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR GCA 72 bp | CCAATCCTTCTGAGGGCTTTACTCAACAGCACCTTCTaGATTTCCCCAGAGATTCTAGAGGCAACCTGGCGG | + |
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Preference number: 3 (lower is better) Translates to: PILLRALLNSTF*ISPEILEATWR Trigger: CCGCCAGGTTGCCTCTAGAATCTCTGGGGAAATGCAGAAGGTGCTGTTGAGTAAAGCCCTCAGAAGGATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR-3UTR CAA 90 bp | TGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACTTCCCCGTACCATCCCGCATGTCCCTCTTaGCCTGCTTGCTCACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: CSILVTCHFLRCYTSPYHPACPS*PACSQF Trigger: GAACTGTGAGCAAGCAGGCAAAGAGGGACATGCGGG...ATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| 3UTR TCA 72 bp | AGACTAGGTGATAGATCAACAGAGGAGACTTTGCTGTaGGCTAGTGAGAGGGGTCAGCCACTGGTTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLGDRSTEETLL*ASERGQPLVGR Trigger: CCTTCCAACCAGTGGCTGACCCCTCTCACTAGCTCACAGCAAAGTCTCCTCTGTTGATCTATCACCTAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | GAGAGGTGGAGTGATTTGACTGAGGTCACAGGGTGGTaGGTTTGTGTGACCCAGGTTGCAAATACTTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ERWSDLTEVTGW*VCVTQVANTYF Trigger: GAAGTAAGTATTTGCAACCTGGGTCACACAAACTCACCACCCTGTGACCTCAGTCAAATCACTCCACCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR CCA 72 bp | TATGTGATAGACACTTGGAATCACCAAATCCAACCATaGCAGGAAGCCCACAGATCTGGAGAAGGCCACCTA | + |
|
Preference number: 3 (lower is better) Translates to: YVIDTWNHQIQP*QEAHRSGEGHL Trigger: TAGGTGGCCTTCTCCAGATCTGTGGGCTTCCTGCCATGGTTGGATTTGGTGATTCCAAGTGTCTATCACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR-3UTR CAA 90 bp | GCAACTGGATCTCTACAACATCCATGCATTTTCGGCTCTTTAGAGGCAGGGACTACGCCAGGACCACTTTaGCAAGGTGCAAAGCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ATGSLQHPCIFGSLEAGTTPGPL*QGAKLF Trigger: AAAAAGCTTTGCACCTTGCAAAAGTGGTCCTGGCGT...AGTCCCTGCCTCTAAAGAGCCGAAAATGCATGGATGTTGTAGAGATCCAGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
||
| 3UTR TCA 72 bp | GTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTaGGGTGTTACACTTCCCCGTACCATTCTTCCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VVDVPSWSLVTF*GVTLPRTILPM Trigger: CATGGGAAGAATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| 3UTR CCA 72 bp | CTTCTCCTAATGAGATCCATGTCTACTCTAGGAGACTaGTCACTCTTTCAGGTCACTGATGGAAGAGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: LLLMRSMSTLGD*SLFQVTDGRAT Trigger: GGTTGCTCTTCCATCAGTGACCTGAAAGAGTGACCAGTCTCCTAGAGTAGACATGGATCTCATTAGGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | TTAAATAAAACTGCAAATCAAATGTCTCCTGCCGTGTaGCATGCTGGGGAGACTGAGTCCTTAGCTTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LNKTANQMSPAV*HAGETESLACH Trigger: GTGACAAGCTAAGGACTCAGTCTCCCCAGCATGTCACACGGCAGGAGACATTTGATTTGCAGTTTTATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | GTCTACTCTAGGAGACTGGTCACTCTTTCAGGTCACTaGTGGAAGAGCAACCTCTACAAAACAAGAAATCAG | + |
|
Preference number: 3 (lower is better) Translates to: VYSRRLVTLSGH*WKSNLYKTRNQ Trigger: CTGATTTCTTGTTTTGTAGAGGTTGCTCTTCCATCAGTGACCTGAAAGAGTGACCAGTCTCCTAGAGTAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR CCA 72 bp | AACTTTTCCCTGTATCCTTCTGGGGAAGCAGGTGGATaGTCAGCTGACCTCTTATTCCATTTACATTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: NFSLYPSGEAGG*SADLLFHLHFY Trigger: GTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGCTTCCCCAGAAGGATACAGGGAAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | TACAGAATTCCTTGCATCCTAGCAATTCAAGGGTTCTaGTGTTGCACCCTCCTGGAAACCCAGAACAAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: YRIPCILAIQGF*CCTLLETQNKN Trigger: ATTTTTGTTCTGGGTTTCCAGGAGGGTGCAACATCAGAACCCTTGAATTGCTAGGATGCAAGGAATTCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGTGGATGGTCAGCTGACCTCTTATTCCATTTACATTTCTACAGTAATCAGGCTCCAGGCTTTCGTTaGTTGTTTTTGCTTTGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AGGWSADLLFHLHFYSNQAPGFR*LFLLCF Trigger: AAAGCAAAGCAAAAACAACAAACGAAAGCCTGGAGC...CTGATTACTGTAGAAATGTAAATGGAATAAGAGGTCAGCTGACCATCCACCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | TTGTGTGACCCAGGTTGCAAATACTTACTTCTTCAGTaGTTAAAAAGAAACCAGGACTCCCAAATCCCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: LCDPGCKYLLLQ*LKRNQDSQIPS Trigger: GCTAGGGATTTGGGAGTCCTGGTTTCTTTTTAATCACTGAAGAAGTAAGTATTTGCAACCTGGGTCACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | ACCAATAAGAACTTGGATATTGTGGTGGCATCCCAGTaGCAGATGAATGATCCTTGGAGCTACATTGTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: TNKNLDIVVASQ*QMNDPWSYIVS Trigger: ACTAACAATGTAGCTCCAAGGATCATTCATCTGTCACTGGGATGCCACCACAATATCCAAGTTCTTATTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | CATTCATGTTTTGGAACCATGGGGAAAGCCATGCTTTaGATGGGAATGCTCATTCATTTGAGAAGTGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HSCFGTMGKAML*MGMLIHLRSAK Trigger: TTTGGCACTTCTCAAATGAATGAGCATTCCCATTCAAAGCATGGCTTTCCCCATGGTTCCAAAACATGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR CCA 72 bp | GTCAAGTACTTTCTTAAAGAAACAATAGCACCACATTaGCGTAGCTGGCCAAACAGTAAAGGGGAAAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VKYFLKETIAPH*RSWPNSKGESK Trigger: TTTGCTTTCCCCTTTACTGTTTGGCCAGCTACGCCAATGTGGTGCTATTGTTTCTTTAAGAAAGTACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR TCA 72 bp | CATTTTTCTAAATGTTTTTGGTTAGCAATGCCCAGTTaGATGCATCCAACACATTTCCAGGAAGCTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: HFSKCFWLAMPS*MHPTHFQEAGS Trigger: GGATCCAGCTTCCTGGAAATGTGTTGGATGCATTCAACTGGGCATTGCTAACCAAAAACATTTAGAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR CCA 72 bp | GACTCATCTTACAATGTTCAAGCACTTGATAGTCTTTaGAGAATAGGATCAACATTTGACCTAGGTATTGAG | + |
|
Preference number: 3 (lower is better) Translates to: DSSYNVQALDSL*RIGSTFDLGIE Trigger: CTCAATACCTAGGTCAAATGTTGATCCTATTCTCCAAAGACTATCAAGTGCTTGAACATTGTAAGATGAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR GCA 72 bp | TTTGAAGAAACCATTGAGAGTTTAAGAGACGTTCTATaGTTCAAACACACACCTAAAAATGATTGGCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: FEETIESLRDVL*FKHTPKNDWPQ Trigger: TTGAGGCCAATCATTTTTAGGTGTGTGTTTGAAGCATAGAACGTCTCTTAAACTCTCAATGGTTTCTTCAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTTGCTTCAGCTCCTCTGCGGCTTTCCTGGGCTCCTGTCTGCTCCTTCAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DCLASAPLRLSWAPVCSFNTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...GAAGGAGCAGACAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAKDPAVMWHFLLRGRLLNTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...GAGGAGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| 3UTR CAA 72 bp | CCGTCACAGACATTATCTAGCTTAGTGAGGACTGCCTaGCTTCAGCTCCTCTGCGGCTTTCCTGGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSQTLSSLVRTA*LQLLCGFPGLL Trigger: CAGGAGCCCAGGAAAGCCGCAGAGGAGCTGAAGCAAGGCAGTCCTCACTAAGCTAGATAATGTCTGTGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGAGGTGCCCTCCGAATaGTGGAGCCATAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRCFAGCSSSKGSCGDVEVPSE*WSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTC...CACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTGAGGTGCCCTCCGAATaGTGGAGCCATAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FAGCSSSKGSCGDVAFSAEVPSE*WSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTC...AGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCCCGCAAAGGGTCTCTaGTCCAGCTGTGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLQVAQAAKDPAVMWHFLPAKGL*SSCGGA Trigger: AGCTCCACCACAGCTGGACCAGAGACCCTTTGCGGG...CAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCACCCGCAAAGGGTCTCTaGTCCAGCTGTGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FRCFAGCSSSKGSCGDVAPAKGL*SSCGGA Trigger: AGCTCCACCACAGCTGGACCAGAGACCCTTTGCGGG...TGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AAKDPAVMWHFLLRGRLLFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...GAGGAGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTACACTTCCCCGTACCATTCTTCCCATGTGTAAGTGCCGTATCCCAGAGGAGGTTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFPVPFFPCVSAVSQRRLGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...CCTCCTCTGGGATACGGCACTTACACATGGGAAGAATGGTACGGGGAAGTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR TCA 90 bp | GTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGAGGGACGGGGACTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFRCFAGCSSSKGSCGDVRDGDF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCT...CACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCCCATGTGTAAGTGCCGTATCCCAGAGGAGGACTTTCTTACTTCCGTCGAGGTGCCCTCCGAATaGTGGAGCCATAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILPMCKCRIPEEDFLTSVEVPSE*WSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTC...GACGGAAGTAAGAAAGTCCTCCTCTGGGATACGGCACTTACACATGGGAAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | TTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGAGGTGCCCTCCGAATaGTGGAGCCATAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FGRCFDVLQVAQAAKDPAEVPSE*WSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTC...CGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FAGCSSSKGSCGDVAFSANACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...AGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGCCCGCAAAGGGTCTCTaGTCCAGCTGTGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FGRCFDVLQVAQAAKDPAPAKGL*SSCGGA Trigger: AGCTCCACCACAGCTGGACCAGAGACCCTTTGCGGG...CGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTTTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAGCSSSKGSCGDVAFSALGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...AGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRCFAGCSSSKGSCGDVALGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...TGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGTTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CFDVLQVAQAAKDPAVMWLGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...CCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCFDVLQVAQAAKDPAVMLGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...CATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | TTACACTTCCCCGTACCATTCTTCCCATGTGTAAGTGCCGTATCCCAGAGGAGGTTTCTCTGGGACCTCTaGTTTTCCGAGTTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LHFPVPFFPCVSAVSQRRFLWDL*FSELPP Trigger: CGGAGGCAACTCGGAAAATCAGAGGTCCCAGAGAAA...CCTCCTCTGGGATACGGCACTTACACATGGGAAGAATGGTACGGGGAAGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | TGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACTTCCCCGTACCATAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CSILVTCHFLRCYTSPYHNACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...ATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | TTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCAAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRCFAGCSSSKGSCGDVANTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...TGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFDVLQVAQAAKDPAVMWNTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...CCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | GCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTCCGTGGGAGGCTCCTCCCTTTCCTTCTCCTTTaGAGCTTCGTTTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAKDPAVMWHFLLRGRLLPFLLL*SFVFLF Trigger: AAACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGG...GAGGAGCCTCCCACGGAGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| CDS-3UTR CCA 90 bp | TGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACTTCCCCGTACCATCTCCTGTTCCCCTTCTaGGTGTGTCTTTGGCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSILVTCHFLRCYTSPYHLLFPF*VCLWLT Trigger: GGTGAGCCAAAGACACACCCAGAAGGGGAACAGGAG...ATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR TCA 90 bp | TATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGAGGGACGGGGACTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YLVGVSMFCRLLKQQRILRDGDF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCT...CAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGAGGTGCCCTCCGAATaGTGGAGCCATAGCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFGRCFDVLQVAQAAKDPEVPSE*WSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTC...AGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTGATGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACTTCCCCGTAGGGACTTCTGAGTCTTaGGCATGTCAGTGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LMFHPGHLSLSEVLHFPVGTSES*ACQCGA Trigger: AGCGCCACACTGACATGCCCAAGACTCAGAAGTCCC...TACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFGRCFDVLQVAQAAKDPNACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...AGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACCCCGCAAAGGGTCTCTaGTCCAGCTGTGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLMFHPGHLSLSEVLHPAKGL*SSCGGA Trigger: AGCTCCACCACAGCTGGACCAGAGACCCTTTGCGGG...GTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR CCA 90 bp | TGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFDVLQVAQAAKDPAVMWFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...CCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FDVLQVAQAAKDPAVMWHFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...ATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | ACACTTGGAATCACCAAATCCAACCATGGCAGGAAGCCCACAGATCTGGAGAAGCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TLGITKSNHGRKPTDLEKQVEEV*RRHDVY Trigger: ATACACATCATGTCGTCTTCACACCTCTTCTACCTG...CTTCTCCAGATCTGTGGGCTTCCTGCCATGGTTGGATTTGGTGATTCCAAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| CDS-3UTR TCA 90 bp | TTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FDVLQVAQAAKDPAVMWHQVEEV*RRHDVY Trigger: ATACACATCATGTCGTCTTCACACCTCTTCTACCTG...ATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | TTATTGTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACAGGGACGGGGACTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLMFHPGHLSLSEVLHRDGDF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCT...GTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR TCA 90 bp | TTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTAAATGTACTTCCTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FAGCSSSKGSCGDVAFSAKCTSF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGGAAGTACATTT...AGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | TATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YCYLVGVSMFCRLLKQQRNACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...CCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACTTCCCCGTACCATTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSILVTCHFLRCYTSPYHFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...ATGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | TTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFGRCFDVLQVAQAAKDPNTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...AGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGGTAGGTCTTGTTTCCTaGACTTCCTCTACTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLQVAQAAKDPAVMWHFLVGLVS*TSSTCV Trigger: AACACAAGTAGAGGAAGTGCAGGAAACAAGACCTAC...CAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCTGTAGGTCTTGTTTCCTaGACTTCCTCTACTTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FAGCSSSKGSCGDVAFSAVGLVS*TSSTCV Trigger: AACACAAGTAGAGGAAGTGCAGGAAACAAGACCTAC...AGCAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCACCCGCAAAGGGTCTCTaGTCCAGCTGTGGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLFGRCFDVLQVAQAAPAKGL*SSCGGA Trigger: AGCTCCACCACAGCTGGACCAGAGACCCTTTGCGGG...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGGGGACTTCTGAGTCTTaGGCATGTCAGTGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCYLVGVSMFCRLLKQQRGTSES*ACQCGA Trigger: AGCGCCACACTGACATGCCCAAGACTCAGAAGTCCC...CCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| CDS-3UTR TCA 90 bp | AGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGGGTGTGAAGACGACATaGTGTGTATCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCFDVLQVAQAAKDPAVMGVKTT*CVSLSS Trigger: TGAAGATAAAGATACACATCATGTCGTCTTCACACC...CATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | ACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYYCYLVGVSMFCRLLKQNACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...CTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | TATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAATTGGGCATGTCAGTGTaGCGCTGGGCACGGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YYCYLVGVSMFCRLLKQQLGMSV*RWARIE Trigger: CTCTATCCGTGCCCAGCGCCACACTGACATGCCCAA...TTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
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| 3UTR CAA 72 bp | TTAAAAAGAAACCAGGACTCCCAAATCCCTAGCCTCTaGCTTTTCCCACTCCATAGCTTCCTCTCTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LKRNQDSQIPSL*LFPLHSFLSGL Trigger: AAGTCCAGAGAGGAAGCTATGGAGTGGGAAAAGCAAGAGGCTAGGGATTTGGGAGTCCTGGTTTCTTTTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| CDS-3UTR TCA 90 bp | GTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCTGCAGATCTTAAATAATTaGGTTGGAAGGCTGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLQVAQAAKDPAVMWHFLQILNN*VGRLLI Trigger: AATCAGCAGCCTTCCAACTCAATTATTTAAGATCTG...CAGAAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | GATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTGGTGTGAAGACGACATaGTGTGTATCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DVLQVAQAAKDPAVMWHFGVKTT*CVSLSS Trigger: TGAAGATAAAGATACACATCATGTCGTCTTCACACC...AAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
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| CDS-3UTR GCA 90 bp | TTGGACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDLLLLFGRCFDVLQVAQNACLR*PPNAGA Trigger: GGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATT...TTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTCCCATGTGTAAGTGCCGTATCCCAGAGGAGGACTTTCTTACTTCCGTCCCTTTCCTTCTCCTTTaGAGCTTCGTTTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPMCKCRIPEEDFLTSVPFLLL*SFVFLF Trigger: AAACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGG...GACGGAAGTAAGAAAGTCCTCCTCTGGGATACGGCACTTACACATGGGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR GCA 90 bp | GATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGGCATTTTCCTTTCCTTCTCCTTTaGAGCTTCGTTTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DVLQVAQAAKDPAVMWHFPFLLL*SFVFLF Trigger: AAACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGG...AAAATGCCACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| CDS-3UTR CCA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAGGGACTTCTGAGTCTTaGGCATGTCAGTGTGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLFGRCFDVLQVAQAAGTSES*ACQCGA Trigger: AGCGCCACACTGACATGCCCAAGACTCAGAAGTCCC...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
||
| 3UTR CAA 72 bp | TGGTTGTTATTGTTGTTGATGTTCCATCCTGGTCACTaGTCACTTTCTGAGGTGTTACACTTCCCCGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: WLLLLLMFHPGH*SLSEVLHFPVP Trigger: TGGTACGGGGAAGTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAACAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| 3UTR CAA 72 bp | CTAGACAAGATGATTAGACTCTGTAAAACAAGCAGCTaGAGCTACGTGGGAAGAGGTGAAGATAAGGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LDKMIRLCKTSS*SYVGRGEDKGT Trigger: GGTTCCCTTATCTTCACCTCTTCCCACGTAGCTCAAGCTGCTTGTTTTACAGAGTCTAATCATCTTGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
||
| CDS-3UTR GCA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLFGRCFDVLQVAQAANTHPQ*LSEVPS Trigger: GGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTT...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGCCACTTGACTACTTATTTGCTATTGCTCTTAAGGAGGCCAAATTCAACATTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGHLTTYLLLLLRRPNSTFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...TGTTGAATTTGGCCTCCTTAAGAGCAATAGCAAATAAGTAGTCAAGTGGCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
||
| 3UTR CAA 72 bp | GACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTaGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLLLLFGRCFDV*QVAQAAKDPAV Trigger: CACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| 3UTR CAA 72 bp | TCTTGCTTTTCCCACTCCATAGCTTCCTCTCTGGACTaGACAAGTAAGTGCGTCTTAATGGACTCTATATCT | + |
|
Preference number: 4 (lower is better) Translates to: SCFSHSIASSLD*TSKCVLMDSIS Trigger: AGATATAGAGTCCATTAAGACGCACTTACTTGTCAAGTCCAGAGAGGAAGCTATGGAGTGGGAAAAGCAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| CDS-3UTR TCA 90 bp | TATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YCYLVGVSMFCRLLKQQRQVEEV*RRHDVY Trigger: ATACACATCATGTCGTCTTCACACCTCTTCTACCTG...CCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGCCACTTGACTACTTATTTGCTATTGCTCTTAAGGAGGCCAAATTCAACAAAATGTACTTCCTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGHLTTYLLLLLRRPNSTKCTSF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGGAAGTACATTT...TGTTGAATTTGGCCTCCTTAAGAGCAATAGCAAATAAGTAGTCAAGTGGCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| 3UTR CAA 72 bp | GGAGCTACATTGTTAGTGGGTTATTTACAGAATTCCTaGCATCCTAGCAATTCAAGGGTTCTGATGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GATLLVGYLQNS*HPSNSRVLMLH Trigger: GTGCAACATCAGAACCCTTGAATTGCTAGGATGCAAGGAATTCTGTAAATAACCCACTAACAATGTAGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
||
| CDS-3UTR TCA 90 bp | TTGTTATTGTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACAGGTAGAAGAGGTGTaGAGACGACATGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLMFHPGHLSLSEVLQVEEV*RRHDVY Trigger: ATACACATCATGTCGTCTTCACACCTCTTCTACCTG...TAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
||
| CDS-3UTR CCA 90 bp | TATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAATTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YYCYLVGVSMFCRLLKQQFCRLQ*GTVHLQ Trigger: CTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAA...TTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCACAGGTAGAAGAGGTGTaGAGACGACATGATGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLFGRCFDVLQVAQAAQVEEV*RRHDVY Trigger: ATACACATCATGTCGTCTTCACACCTCTTCTACCTG...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTCAGATCTTAAATAATTaGGTTGGAAGGCTGCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFGRCFDVLQVAQAAKDPQILNN*VGRLLI Trigger: AATCAGCAGCCTTCCAACTCAATTATTTAAGATCTG...AGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
||
| CDS-3UTR TCA 90 bp | GTAGGCCACTTGACTACTTATTTGCTATTGCTCTTAAGGAGGCCAAATTCAACAGGTGTGAAGACGACATaGTGTGTATCTTTATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHLTTYLLLLLRRPNSTGVKTT*CVSLSS Trigger: TGAAGATAAAGATACACATCATGTCGTCTTCACACC...TGTTGAATTTGGCCTCCTTAAGAGCAATAGCAAATAAGTAGTCAAGTGGCCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 |
||
| CDS-3UTR TCA 90 bp | ACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGAAATGTACTTCCTTCTaGGTCTTGGGCATGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TYYCYLVGVSMFCRLLKQKCTSF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGGAAGTACATTT...CTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
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| CDS-3UTR TCA 90 bp | TATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGCAGATCTTAAATAATTaGGTTGGAAGGCTGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: YCYLVGVSMFCRLLKQQRQILNN*VGRLLI Trigger: AATCAGCAGCCTTCCAACTCAATTATTTAAGATCTG...CCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
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| CDS-3UTR TCA 90 bp | TTGGACTTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAAAATGTACTTCCTTCTaGGTCTTGGGCATGTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LDLLLLFGRCFDVLQVAQKCTSF*VLGMSV Trigger: CACTGACATGCCCAAGACTCAGAAGGAAGTACATTT...TTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAAGTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
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| CDS-3UTR GCA 90 bp | TATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAGTAGGTCTTGTTTCCTaGACTTCCTCTACTTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: YYCYLVGVSMFCRLLKQQVGLVS*TSSTCV Trigger: AACACAAGTAGAGGAAGTGCAGGAAACAAGACCTAC...TTGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095360.11 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122386.8 |
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| 3UTR CAA 72 bp | TTGCCCCCAGTTCAAGTTATTGACCAACACTTCAGATaGGGTGAAGTATTGCCAATTTTGTTAAATTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LPPVQVIDQHFR*GEVLPILLNLR Trigger: TCTCAAATTTAACAAAATTGGCAATACTTCACCCAATCTGAAGTGTTGGTCAATAACTTGAACTGGGGGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| 3UTR CAA 72 bp | ATCTTTAACAAAGAGAGACCAGGTCTGATATGCTATTaGGAGCTTTCCTGTAAACTTAATATACACTGTATG | + |
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Preference number: 4 (lower is better) Translates to: IFNKERPGLICY*ELSCKLNIHCM Trigger: CATACAGTGTATATTAAGTTTACAGGAAAGCTCCAAATAGCATATCAGACCTGGTCTCTCTTTGTTAAAGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095360.11 |
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| CDS CCA 90 bp | GTGGCGCTGGGCACGGATAGAGCGGGCTGCTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAGTCTCCTCAGATCACAGCTCCGGAA | + |
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Preference number: 5 (lower is better) Translates to: VALGTDRAGCFCRLQ*GTVHLQSPQITAPE Trigger: TTCCGGAGCTGTGATCTGAGGAGACTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAAGCAGCCCGCTCTATCCGTGCCCAGCGCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS GCA 90 bp | CCAGTCTCCTCAGATCACAGCTCCGGAAGCAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCCGAATGCTGGAGCCATAGCCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: PVSSDHSSGSNTHPQ*LSEVPSECWSHSLW Trigger: CCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTTGCTTCCGGAGCTGTGATCTGAGGAGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS TCA 90 bp | CTTTGCAGCTTCGTTTTCTTGTTTGTCGATAGGGACGGGGACTTCTaGGTCTTGGGCATGTCAGTGTGGCGCTGGGCACGGATAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: LCSFVFLFVDRDGDF*VLGMSVWRWARIER Trigger: CCGCTCTATCCGTGCCCAGCGCCACACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCTATCGACAAACAAGAAAACGAAGCTGCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062862.13 ENSMUST00000105300.9 ENSMUST00000122100.3 ENSMUST00000126490.8 |
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| CDS GCA 90 bp | ATCACAGCTCCGGAAGCAACACTCATCCACAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCCATAGCCTGTGGGCTTGTTGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: ITAPEATLIHNACLR*PPNAGAIACGLVEV Trigger: TACTTCAACAAGCCCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTTGCTTCCGGAGCTGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS CCA 90 bp | TCTGATTTTCCGAGTTGCCTCCGTTACCTCCTCCTGTTCCCCTTCTaGGTGTGTCTTTGGCTCACCTTTCCTTCTCCTTTGCAGCTTCGT | + |
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Preference number: 5 (lower is better) Translates to: SDFPSCLRYLLLFPF*VCLWLTFPSPLQLR Trigger: ACGAAGCTGCAAAGGAGAAGGAAAGGTGAGCCAAAGACACACCCAGAAGGGGAACAGGAGGAGGTAACGGAGGCAACTCGGAAAATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| CDS TCA 90 bp | GGAGCTGGTGAAGGTGAGCAAGCAGAGCGCCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTATCTTTATCTTCAAGAAGTCACAGAG | + |
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Preference number: 5 (lower is better) Translates to: GAGEGEQAERQVEEV*RRHDVYLYLQEVTE Trigger: CTCTGTGACTTCTTGAAGATAAAGATACACATCATGTCGTCTTCACACCTCTTCTACCTGGCGCTCTGCTTGCTCACCTTCACCAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
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| CDS-3UTR CAA 90 bp | GCCGTATCCCAGAGGAGGACTTTCTTACTTCCGTCACAGACATTATCTAGCTTACTTCTGGGTGTGTCTTaGGCTCACCTTTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AVSQRRTFLLPSQTLSSLLLGVS*AHLSFS Trigger: GGAGAAGGAAAGGTGAGCCAAAGACACACCCAGAAG...TAAGCTAGATAATGTCTGTGACGGAAGTAAGAAAGTCCTCCTCTGGGATACGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| CDS-3UTR CAA 90 bp | GTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCAAAGGATCCTGCGGTGATGTGTCCTTTCCTTCTCCTTaGCAGCTTCGTTTTCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: VFRCFAGCSSSKGSCGDVSFPSP*QLRFLV Trigger: AACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGGA...CACATCACCGCAGGATCCTTTGCTGCTTGAGCAACCTGCAAAACATCGAAACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
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| CDS-3UTR CAA 90 bp | TTATTGTTGTTGATGTTCCATCCTGGTCACTTGTCACTTTCTGAGGTGTTACACACCTTTCCTTCTCCTTaGCAGCTTCGTTTTCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LLLLMFHPGHLSLSEVLHTFPSP*QLRFLV Trigger: AACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGGT...GTGTAACACCTCAGAAAGTGACAAGTGACCAGGATGGAACATCAACAACAATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| CDS-3UTR CAA 90 bp | TTATTATTGTTATTTGGTAGGTGTTTCGATGTTTTGCAGGTTGCTCAAGCAGCATCCTTTCCTTCTCCTTaGCAGCTTCGTTTTCTTGTT | + |
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Preference number: 5 (lower is better) Translates to: LLLLFGRCFDVLQVAQAASFPSP*QLRFLV Trigger: AACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGGA...TGCTGCTTGAGCAACCTGCAAAACATCGAAACACCTACCAAATAACAATAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105300.9 ENSMUST00000122100.3 |
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| CDS GCA 72 bp | CCGGAAGCAACACTCATCCACAATGCCTGTCTGAGGTaGCCTCCGAATGCTGGAGCCATAGCCTGTGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PEATLIHNACLR*PPNAGAIACGL Trigger: AAGCCCACAGGCTATGGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTTGCTTCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS GCA 72 bp | CATGTCAGTGTGGCGCTGGGCACGGATAGAGCGGGCTaGTTTTGTAGGCTTCAGTGGGGCACAGTACATCTC | + |
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Preference number: 6 (lower is better) Translates to: HVSVALGTDRAG*FCRLQWGTVHL Trigger: GAGATGTACTGTGCCCCACTGAAGCCTACAAAAGCAGCCCGCTCTATCCGTGCCCAGCGCCACACTGACATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS TCA 72 bp | TTCGTTTTCTTGTTTGTCGATAGGGACGGGGACTTCTaGGTCTTGGGCATGTCAGTGTGGCGCTGGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: FVFLFVDRDGDF*VLGMSVWRWAR Trigger: CCGTGCCCAGCGCCACACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCTATCGACAAACAAGAAAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062862.13 ENSMUST00000105300.9 ENSMUST00000122100.3 ENSMUST00000126490.8 |
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| CDS GCA 72 bp | TCAGATCACAGCTCCGGAAGCAACACTCATCCACAATaGCTGTCTGAGGTGCCCTCCGAATGCTGGAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SDHSSGSNTHPQ*LSEVPSECWSH Trigger: ATGGCTCCAGCATTCGGAGGGCACCTCAGACAGGCATTGTGGATGAGTGTTGCTTCCGGAGCTGTGATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS CCA 72 bp | GGCACGGATAGAGCGGGCTGCTTTTGTAGGCTTCAGTaGGGCACAGTACATCTCCAGTCTCCTCAGATCACA | + |
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Preference number: 6 (lower is better) Translates to: GTDRAGCFCRLQ*GTVHLQSPQIT Trigger: TGTGATCTGAGGAGACTGGAGATGTACTGTGCCCCACTGAAGCCTACAAAAGCAGCCCGCTCTATCCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000062862.13 ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000122386.8 ENSMUST00000126490.8 |
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| CDS TCA 72 bp | GAAGGTGAGCAAGCAGAGCGCCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTATCTTTATTGCAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: EGEQAERQVEEV*RRHDVYLYCRC Trigger: GCACCTGCAATAAAGATACACATCATGTCGTCTTCACACCTCTTCTACCTGGCGCTCTGCTTGCTCACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000062862.13 ENSMUST00000121161.8 ENSMUST00000121952.8 ENSMUST00000122100.3 ENSMUST00000126490.8 |
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| CDS CAA 90 bp | TCTTTGGCTCACCTTTCCTTCTCCTTTGCAGCTTCGTTTTCTTGTTaGTCGATAGGGACGGGGACTTCTGAGTCTTGGGCATGTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: SLAHLSFSFAASFSC*SIGTGTSESWACQC Trigger: ACACTGACATGCCCAAGACTCAGAAGTCCCCGTCCCTATCGACAAACAAGAAAACGAAGCTGCAAAGGAGAAGGAAAGGTGAGCCAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062862.13 |
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| CDS TCA 72 bp | GAAGGTGAGCAAGCAGAGCGCCAGGTAGAAGAGGTGTaGAGACGACATGATGTGTATCTTTATCTTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: EGEQAERQVEEV*RRHDVYLYLQE Trigger: TTCTTGAAGATAAAGATACACATCATGTCGTCTTCACACCTCTTCTACCTGGCGCTCTGCTTGCTCACCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095360.11 ENSMUST00000105300.9 ENSMUST00000122386.8 |
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