RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGDCC4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032816

Ensembl transcript IDs: ENSMUST00000035499.5, ENSMUST00000077696.13, ENSMUST00000166273.2, ENSMUST00000213533.2

Found 611 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACAGCCATGCTGTGGTAGGCTGCGGTGTCATAGGCCCGTGGAGTTaGCTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCG +
Preference number: 1 (lower is better)
Translates to: DSHAVVGCGVIGPWS*LALCSAQLTEEGLA
Trigger: CGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGTCAACTCCACGGGCCTATGACACCGCAGCCTACCACAGCATGGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 90 bp CAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTaGAGCCAGGTTCAGGGCTCCAGGGTCAGGGAACTGAGCCATGGC +
Preference number: 1 (lower is better)
Translates to: QRLPLQHLGGNSLLL*SQVQGSRVRELSHG
Trigger: GCCATGGCTCAGTTCCCTGACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CCA 90 bp AGCCAGCCGCCCTTTTCCTATGCAAAGACTTCCCTTACAGCATCTTaGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAG +
Preference number: 1 (lower is better)
Translates to: SQPPFSYAKTSLTAS*RKLFATLKPGSGLQ
Trigger: CTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAGGAAAAGGGCGGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 90 bp AACTTGGCCCAGAAGCCAGAGTTAACACTTGATGTGCCAGCCAGTTaGAATAGAAAGATGTGCAGCAAGAGCACAGATGCCACTGGATCT +
Preference number: 1 (lower is better)
Translates to: NLAQKPELTLDVPAS*NRKMCSKSTDATGS
Trigger: AGATCCAGTGGCATCTGTGCTCTTGCTGCACATCTTTCTATTTCAACTGGCTGGCACATCAAGTGTTAACTCTGGCTTCTGGGCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 90 bp CTAATGCCCTGTAAAAGGCCAACAGACTTTCCTAATAAGACCTGCTaGTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCC +
Preference number: 1 (lower is better)
Translates to: LMPCKRPTDFPNKTC*YKVTKLTLPSYSEP
Trigger: GGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGTCTTATTAGGAAAGTCTGTTGGCCTTTTACAGGGCATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 90 bp GGACTAATGCCCTGTAAAAGGCCAACAGACTTTCCTAATAAGACCTaGTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAA +
Preference number: 1 (lower is better)
Translates to: GLMPCKRPTDFPNKT*CYKVTKLTLPSYSE
Trigger: TTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGTCTTATTAGGAAAGTCTGTTGGCCTTTTACAGGGCATTAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 90 bp AGCAATGAAGAAACATACGGTGGTGTTGGCCGTGGCCACTTTGAATaGTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGAGATA +
Preference number: 1 (lower is better)
Translates to: SNEETYGGVGRGHFE*YRSSSSDNPVFNEI
Trigger: TATCTCATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTCTTCATTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 90 bp AGTATTGCATACACTTGTCATGCTTCGAGAAAAGAAATTCTTAAATaGGACTCCAAAGAACTTAAGGCATCCATGGCAAACGACAAAGGG +
Preference number: 1 (lower is better)
Translates to: SIAYTCHASRKEILK*DSKELKASMANDKG
Trigger: CCCTTTGTCGTTTGCCATGGATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGACAAGTGTATGCAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCTGCTCAGCACAGCTaGCAGAAGAGGGGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSAQHS*QKRGWR
Trigger: GCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGGAGGCCAGGGGGATaGCAGCCATGCTGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGRRPGG*QPCCGR
Trigger: CCTACCACAGCATGGCTGTCATCCCCCTGGCCTCCT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATCAAAGAGCTGGCACTaGTCACTGTTACACCATCCT +
Preference number: 2 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVSKSWH*SLLHHP
Trigger: AGGATGGTGTAACAGTGATCAGTGCCAGCTCTTTGA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTCCAGGGGTCACACTATaGTCTGAAGCAGACATGAGG +
Preference number: 2 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGPGVTL*SEADMR
Trigger: CCTCATGTCTGCTTCAGACCATAGTGTGACCCCTGG...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATTGGCAGGGGAGCTGTaGGGACCCAGGGGTCACACT +
Preference number: 2 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKLAGEL*GPRGHT
Trigger: AGTGTGACCCCTGGGTCCCCACAGCTCCCCTGCCAA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGTCTGAAGCAGACATaGGGTAGTCATGTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGLKQT*GSHVVR
Trigger: CCTAACAACATGACTACCTCATGTCTGCTTCAGACC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTCTGCTCAGCACAGCTaGCAGAAGAGGGGCTGGCGC +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGSAQHS*QKRGWR
Trigger: GCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAGGAGGCCAGGGGGATaGCAGCCATGCTGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGRRPGG*QPCCGR
Trigger: CCTACCACAGCATGGCTGTCATCCCCCTGGCCTCCT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGTCGAGCAAGATGACATaGGACAGATCACCAGAACAA +
Preference number: 2 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRSSKMT*DRSPEQ
Trigger: TTGTTCTGGTGATCTGTCTCATGTCATCTTGCTCGA...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAAGAGGGGAGCTGAGCTaGGTTCACCCAGACATCTGG +
Preference number: 2 (lower is better)
Translates to: AKTSLTASWRKLFATLKPRGELS*VHPDIW
Trigger: CCAGATGTCTGGGTGAACCCAGCTCAGCTCCCCTCT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTTGGCAGGGGAGCTGTaGGGACCCAGGGGTCACACT +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLAGEL*GPRGHT
Trigger: AGTGTGACCCCTGGGTCCCCACAGCTCCCCTGCCAA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGTTCACCCAGACATCTaGACCTTAGGAGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVVHPDI*TLGGQG
Trigger: CCCCTGGCCTCCTAAGGTCCAGATGTCTGGGTGAAC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGTTCACCCAGACATCTaGACCTTAGGAGGCCAGGGG +
Preference number: 2 (lower is better)
Translates to: LCKDFPYSILEETLCYSEVHPDI*TLGGQG
Trigger: CCCCTGGCCTCCTAAGGTCCAGATGTCTGGGTGAAC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAAGAGGGGAGCTGAGCTaGGTTCACCCAGACATCTGG +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVRGELS*VHPDIW
Trigger: CCAGATGTCTGGGTGAACCCAGCTCAGCTCCCCTCT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAAAATCAGGGGCATCATaGGAAAGAGAAGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKKSGAS*EREGPQ
Trigger: CTGGGGCCCTTCTCTTTCCCATGATGCCCCTGATTT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCACCAGGGGTCACACTATaGTCTGAAGCAGACATGAGG +
Preference number: 2 (lower is better)
Translates to: AKTSLTASWRKLFATLKPPGVTL*SEADMR
Trigger: CCTCATGTCTGCTTCAGACCATAGTGTGACCCCTGG...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTTGGCAGGGGAGCTGTaGGGACCCAGGGGTCACACT +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLAGEL*GPRGHT
Trigger: AGTGTGACCCCTGGGTCCCCACAGCTCCCCTGCCAA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACAGATCTACTTGGAGTaGGTCATCTGCCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKQIYLE*VICPGR
Trigger: CCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATTCCCCTGTGCAGCCTaGACTCATCTCTTCCATAGA +
Preference number: 2 (lower is better)
Translates to: AKTSLTASWRKLFATLKPFPCAA*THLFHR
Trigger: TCTATGGAAGAGATGAGTCCAGGCTGCACAGGGGAA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTCTGAAGCAGACATaGGGTAGTCATGTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: AKTSLTASWRKLFATLKPGLKQT*GSHVVR
Trigger: CCTAACAACATGACTACCTCATGTCTGCTTCAGACC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCACACCCATCTCTCTGTaGAGATGGGTGGCAGCCATT +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGTPISL*RWVAAI
Trigger: AATGGCTGCCACCCATCTGCACAGAGAGATGGGTGT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAACACCCATCTCTCTGTaGAGATGGGTGGCAGCCATT +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVTPISL*RWVAAI
Trigger: AATGGCTGCCACCCATCTGCACAGAGAGATGGGTGT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACAGATCTACTTGGAGTaGGTCATCTGCCCAGGAAGG +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVQIYLE*VICPGR
Trigger: CCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CAA 90 bp ATGAGGCTCTTGACCTTCAGAGCAATGAAGAAACATACGGTGGTGTaGGCCGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACA +
Preference number: 2 (lower is better)
Translates to: MRLLTFRAMKKHTVV*AVATLNAIEVVQVT
Trigger: TGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTCTTCATTGCTCTGAAGGTCAAGAGCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTCAAAGAGCTGGCACTaGTCACTGTTACACCATCCT +
Preference number: 2 (lower is better)
Translates to: FVDTALETLSECNKRLGDSKSWH*SLLHHP
Trigger: AGGATGGTGTAACAGTGATCAGTGCCAGCTCTTTGA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGCCGCCCTTTTCCTATaGAAAGACTTCCCTTACAGC +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGAALFL*KDFPYS
Trigger: GCTGTAAGGGAAGTCTTTGCATAGGAAAAGGGCGGC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATCCAGGGGTCACACTATaGTCTGAAGCAGACATGAGG +
Preference number: 2 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYPGVTL*SEADMR
Trigger: CCTCATGTCTGCTTCAGACCATAGTGTGACCCCTGG...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTATTCCCCTGTGCAGCCTaGACTCATCTCTTCCATAGA +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVFPCAA*THLFHR
Trigger: TCTATGGAAGAGATGAGTCCAGGCTGCACAGGGGAA...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGGTCTGAAGCAGACATaGGGTAGTCATGTTGTTAGG +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGGLKQT*GSHVVR
Trigger: CCTAACAACATGACTACCTCATGTCTGCTTCAGACC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAACTCTTTGCTACTCTaGAGCCAGGTTCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSNSLLL*SQVQGS
Trigger: GGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATAACTCTTTGCTACTCTaGAGCCAGGTTCAGGGCTCC +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNNSLLL*SQVQGS
Trigger: GGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAGATGCCACTGGATCTaGCAATTCTGGGACATGACT +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGRCHWI*QFWDMT
Trigger: AGTCATGTCCCAGAATTGTCAGATCCAGTGGCATCT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCAGAGAGGGACAGGGTaGGAAAGAAGATTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGQRGTG*ERRFPK
Trigger: TTTGGGAAATCTTCTTTCGCACCCTGTCCCTCTCTG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGCCGCCCTTTTCCTATaGAAAGACTTCCCTTACAGC +
Preference number: 2 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYAALFL*KDFPYS
Trigger: GCTGTAAGGGAAGTCTTTGCATAGGAAAAGGGCGGC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGCTCCAAGGACTTATaGATATCTCTAGTACACACA +
Preference number: 2 (lower is better)
Translates to: AKTSLTASWRKLFATLKPGSKDL*ISLVHT
Trigger: TGTGTGTACTAGAGATATCCATAAGTCCTTGGAGCC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAAATCAGGGGCATCATaGGAAAGAGAAGGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSKSGAS*EREGPQ
Trigger: CTGGGGCCCTTCTCTTTCCCATGATGCCCCTGATTT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTATTTTCCAGATCTACTTaGAGTGGGTCATCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: KYQSGLALCGKMILGFSVFSRST*SGSSAQ
Trigger: CTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAA...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATCGAGCAAGATGACATaGGACAGATCACCAGAACAA +
Preference number: 2 (lower is better)
Translates to: LCKDFPYSILEETLCYSESSKMT*DRSPEQ
Trigger: TTGTTCTGGTGATCTGTCTCATGTCATCTTGCTCGA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CAA 90 bp TTCAGAGCAATGAAGAAACATACGGTGGTGTTGGCCGTGGCCACTTaGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATG +
Preference number: 2 (lower is better)
Translates to: FRAMKKHTVVLAVAT*NAIEVVQVTILSLM
Trigger: CATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTCTTCATTGCTCTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCAAAGAGCTGGCACTaGTCACTGTTACACCATCCT +
Preference number: 2 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSKSWH*SLLHHP
Trigger: AGGATGGTGTAACAGTGATCAGTGCCAGCTCTTTGA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGATGTGCCAGCCAGTTaGAATAGAAAGATGTGCAGC +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNDVPAS*NRKMCS
Trigger: GCTGCACATCTTTCTATTTCAACTGGCTGGCACATC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCAGAGAGGGACAGGGTaGGAAAGAAGATTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNQRGTG*ERRFPK
Trigger: TTTGGGAAATCTTCTTTCGCACCCTGTCCCTCTCTG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATAGTGTTATCATAGGCTaGCTGAAGAGGGGAGGAGAA +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNSVIIG*LKRGGE
Trigger: TTCTCCTCCCCTCTTCAGCCAGCCTATGATAACACT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCGAGCAAGATGACATaGGACAGATCACCAGAACAA +
Preference number: 2 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSSKMT*DRSPEQ
Trigger: TTGTTCTGGTGATCTGTCTCATGTCATCTTGCTCGA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATATGGCATGGCTCTTGTaGCTCAGGAAATACCAGTCA +
Preference number: 2 (lower is better)
Translates to: VMLREKKFLNETPKNLRHMAWLL*LRKYQS
Trigger: TGACTGGTATTTCCTGAGTCACAAGAGCCATGCCAT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCAGAGAGGGACAGGGTaGGAAAGAAGATTTCCCAAA +
Preference number: 2 (lower is better)
Translates to: VMLREKKFLNETPKNLRHQRGTG*ERRFPK
Trigger: TTTGGGAAATCTTCTTTCGCACCCTGTCCCTCTCTG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAAACCAGAACCTCAGTaGTTGTTAAACAAGAACATG +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGKPEPQ*LLNKNM
Trigger: CATGTTCTTGTTTAACAAGCACTGAGGTTCTGGTTT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTCCCTTACAGCATCTTaGAGGAAACTCTTTGCTACT +
Preference number: 2 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNSLTAS*RKLFAT
Trigger: AGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGAGAAACCAGAGAGATaGCATGGCTCTTGTGACTCA +
Preference number: 2 (lower is better)
Translates to: VMLREKKFLNETPKNLRHEKPER*HGSCDS
Trigger: TGAGTCACAAGAGCCATGCCATCTCTCTGGTTTCTC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAAAGGGAAAATAGACTaGTTATTTCTAACTTGGCCC +
Preference number: 2 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGKGKID*LFLTWP
Trigger: GGGCCAAGTTAGAAATAACCAGTCTATTTTCCCTTT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCTTTCTTATCAACTGTaGGTTATAGGCAGATACCAG +
Preference number: 2 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSLSYQL*VIGRYQ
Trigger: CTGGTATCTGCCTATAACTCACAGTTGATAAGAAAG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR TCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCTTTCTTATCAACTGTaGGTTATAGGCAGATACCAG +
Preference number: 2 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLSYQL*VIGRYQ
Trigger: CTGGTATCTGCCTATAACTCACAGTTGATAAGAAAG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCTAATAAGACCTGCTaGTACAAAGTCACAAAGCTA +
Preference number: 2 (lower is better)
Translates to: VMLREKKFLNETPKNLRHPNKTC*YKVTKL
Trigger: TAGCTTTGTGACTTTGTAGCAGCAGGTCTTATTAGG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp GCTGTGGTAGGCTGCGGTGTCATAGGCCCGTGGAGTTaGCTGGCACTCTGCTCAGCACAGCTGACAGAAGAG +
Preference number: 3 (lower is better)
Translates to: AVVGCGVIGPWS*LALCSAQLTEE
Trigger: CTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGTCAACTCCACGGGCCTATGACACCGCAGCCTACCACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp TCACCCAGACATCTGGACCTTAGGAGGCCAGGGGGATaGCAGCCATGCTGTGGTAGGCTGCGGTGTCATAGG +
Preference number: 3 (lower is better)
Translates to: SPRHLDLRRPGG*QPCCGRLRCHR
Trigger: CCTATGACACCGCAGCCTACCACAGCATGGCTGTCATCCCCCTGGCCTCCTAAGGTCCAGATGTCTGGGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CCA 72 bp GACAAGCCACAAGGTCTTTTCCAGATCTACTTGGAGTaGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGAG +
Preference number: 3 (lower is better)
Translates to: DKPQGLFQIYLE*VICPGRRLAGE
Trigger: CTCCCCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGACCTTGTGGCTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp CCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTaGAGCCAGGTTCAGGGCTCCAGGGTCAGGGAACTG +
Preference number: 3 (lower is better)
Translates to: PLQHLGGNSLLL*SQVQGSRVREL
Trigger: CAGTTCCCTGACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATGCCCAGGAAGGCGGTaGGCAGGGGAGCTGTGGGGA +
Preference number: 3 (lower is better)
Translates to: LCKDFPYSILEETLCYSECPGRR*AGELWG
Trigger: TCCCCACAGCTCCCCTGCCAACCGCCTTCCTGGGCA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATTGCCCAGGAAGGCGGTaGGCAGGGGAGCTGTGGGGA +
Preference number: 3 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYCPGRR*AGELWG
Trigger: TCCCCACAGCTCCCCTGCCAACCGCCTTCCTGGGCA...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp CTAGGTGACAAGGCTAAAAGCTCAAAGAGCTGGCACTaGTCACTGTTACACCATCCTGCCACGGAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: LGDKAKSSKSWH*SLLHHPATEGQ
Trigger: TTGACCCTCCGTGGCAGGATGGTGTAACAGTGATCAGTGCCAGCTCTTTGAGCTTTTAGCCTTGTCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp GGGACCCAGGGGTCACACTATGGTCTGAAGCAGACATaGGGTAGTCATGTTGTTAGGAAAGGGTGCATAGGT +
Preference number: 3 (lower is better)
Translates to: GTQGSHYGLKQT*GSHVVRKGCIG
Trigger: ACCTATGCACCCTTTCCTAACAACATGACTACCTCATGTCTGCTTCAGACCATAGTGTGACCCCTGGGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp AAAGATGTGCAGCAAGAGCACAGATGCCACTGGATCTaGCAATTCTGGGACATGACTGAGGTGAGAAACCAG +
Preference number: 3 (lower is better)
Translates to: KDVQQEHRCHWI*QFWDMTEVRNQ
Trigger: CTGGTTTCTCACCTCAGTCATGTCCCAGAATTGTCAGATCCAGTGGCATCTGTGCTCTTGCTGCACATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR TCA 72 bp GAGGGGAGGAGAAGGAAATGTGGGTGGGGTCAAACATaGGTGACACACAAGGCTAATAAACACAGACGCTTT +
Preference number: 3 (lower is better)
Translates to: EGRRRKCGWGQT*VTHKANKHRRF
Trigger: AAAGCGTCTGTGTTTATTAGCCTTGTGTGTCACTCATGTTTGACCCCACCCACATTTCCTTCTCCTCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CCA 72 bp CCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATaGATATCTCTAGTACACACATGTGTAGCCATGCAT +
Preference number: 3 (lower is better)
Translates to: PSQRTLRGSKDL*ISLVHTCVAMH
Trigger: ATGCATGGCTACACATGTGTGTACTAGAGATATCCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGAAAGGGTGCATAGGTaGAACTCAGGGACGAGAAAC +
Preference number: 3 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGERVHR*NSGTRN
Trigger: GTTTCTCGTCCCTGAGTTCAACCTATGCACCCTTTC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 72 bp CCCTGTAAAAGGCCAACAGACTTTCCTAATAAGACCTaGTGCTACAAAGTCACAAAGCTAACACTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: PCKRPTDFPNKT*CYKVTKLTLPS
Trigger: ACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGTCTTATTAGGAAAGTCTGTTGGCCTTTTACAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CCA 72 bp CCCTTTTCCTATGCAAAGACTTCCCTTACAGCATCTTaGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCA +
Preference number: 3 (lower is better)
Translates to: PFSYAKTSLTAS*RKLFATLKPGS
Trigger: TGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAGGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAAACAAAATGAGGCTCTaGACCTTCAGAGCAATGAAG +
Preference number: 3 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKNKMRL*TFRAMK
Trigger: CTTCATTGCTCTGAAGGTCAAGAGCCTCATTTTGTT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 72 bp GAAACATACGGTGGTGTTGGCCGTGGCCACTTTGAATaGTATAGAAGTAGTTCAAGTGACAATCCTGTCTTT +
Preference number: 3 (lower is better)
Translates to: ETYGGVGRGHFE*YRSSSSDNPVF
Trigger: AAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCTTTTCCAGATCTACTaGGAGTGGGTCATCTGCCCA +
Preference number: 3 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSLFQIY*EWVICP
Trigger: TGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR GCA 72 bp TGTAAAAGGCCAACAGACTTTCCTAATAAGACCTGCTaGTACAAAGTCACAAAGCTAACACTCCCCAGTTAC +
Preference number: 3 (lower is better)
Translates to: CKRPTDFPNKTC*YKVTKLTLPSY
Trigger: GTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGTCTTATTAGGAAAGTCTGTTGGCCTTTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATTTCCCTTACAGCATCTaGGAGGAAACTCTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYFPYSI*EETLCY
Trigger: GTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAA...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CCA 72 bp TTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCATaGCAAACGACAAAGGGACTAATGCCCTGTAAAAGG +
Preference number: 3 (lower is better)
Translates to: FLNETPKNLRHP*QTTKGLMPCKR
Trigger: CCTTTTACAGGGCATTAGTCCCTTTGTCGTTTGCCATGGATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGAAAGGGTGCATAGGTaGAACTCAGGGACGAGAAAC +
Preference number: 3 (lower is better)
Translates to: VMLREKKFLNETPKNLRHERVHR*NSGTRN
Trigger: GTTTCTCGTCCCTGAGTTCAACCTATGCACCCTTTC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTTCCCTTACAGCATCTaGGAGGAAACTCTTTGCTAC +
Preference number: 3 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSFPYSI*EETLCY
Trigger: GTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAACAAAATGAGGCTCTaGACCTTCAGAGCAATGAAG +
Preference number: 3 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYNKMRL*TFRAMK
Trigger: CTTCATTGCTCTGAAGGTCAAGAGCCTCATTTTGTT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCTGGTTATTTCTAACTaGGCCCAGAAGCCAGAGTTA +
Preference number: 3 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLVISN*AQKPEL
Trigger: TAACTCTGGCTTCTGGGCCAAGTTAGAAATAACCAG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACTGCCGCCACCGCCCTaGACCTTGACGCGCCCATTG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVLPPPP*TLTRPL
Trigger: CAATGGGCGCGTCAAGGTGCAGGGCGGTGGCGGCAG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGCACCAGGGCTGGGCTaGAGGTTCGGCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRAPGLG*RFGWPP
Trigger: TGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGGGCAGCTCACAGCCTaGCCAGGAGCCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVGQLTA*PGACPV
Trigger: AACTGGGCAGGCTCCTGGGCAGGCTGTGAGCTGCCC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGCTGGAGGTTCGGCTaGCCCCCAGCTGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGWRFG*PPAGSR
Trigger: CCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAATCCAGAGATCTGGGTaGGGTGAGGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVIQRSG*GEGAAA
Trigger: GGCAGCCGCCCCCTCACCCCACCCAGATCTCTGGAT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGCAGGAGGCAGCGGTaGCCCCCTCTGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGRRQR*PPLDRQ
Trigger: CTGCCTATCCAGAGGGGGCCACCGCTGCCTCCTGCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGACTCTGCGTGGACATaGGCAGGAGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVDSAWT*AGGSGG
Trigger: GCCACCGCTGCCTCCTGCCCATGTCCACGCAGAGTC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTCTGCCGCCACCGCCCTaGACCTTGACGCGCCCATTG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGLPPPP*TLTRPL
Trigger: CAATGGGCGCGTCAAGGTGCAGGGCGGTGGCGGCAG...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGTTGGCGGGCTGAATTaGTGGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVVGGLN*WPRSGR
Trigger: CCTACCGCTGCGTGGCCACCAATTCAGCCCGCCAAC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTGGCAGGAGGCAGCGGTaGCCCCCTCTGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGGRRQR*PPLDRQ
Trigger: CTGCCTATCCAGAGGGGGCCACCGCTGCCTCCTGCC...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGAGCCTGCCCAGTTTaGTCCCCCTGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGACPV*SPCLSP
Trigger: TGGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACACAGGGCTTTGGGCTaGCAGCTTTTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVHRALG*QLFPGA
Trigger: GGCCCCTGGGAAAAGCTGCCAGCCCAAAGCCCTGTG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGGGGGCGGCTGCCATaGCACCACCAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGRGRLP*HHQGLH
Trigger: ATGGAGTCCCTGGTGGTGTCATGGCAGCCGCCCCCT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGTTTCCTGGGGTGCCTaGGGAGGACAATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRVSWGA*GGQSGQ
Trigger: CTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAAC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAACCTCAGCTTCCACCTaGTTCCTGCAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVTSAST*FLQAGD
Trigger: GTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGTAAGCTGGGGTGCTaGGCTGGGGACATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGKLGC*AGDIVQ
Trigger: CTGGACGATGTCCCCAGCGCAGCACCCCAGCTTACC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATCAGCACCTGTCCATTaGTCAGGCTGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVSAPVH*SGWRAG
Trigger: CCCTGCCCTCCAGCCTGAGCAATGGACAGGTGCTGA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGGGCGGTCACCATCTaGCTCCTCCTCTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGAVTI*LLLCSH
Trigger: GTGGGAACAGAGGAGGAGGCAGATGGTGACCGCCCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGTTGGCGGGCTGAATTaGTGGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRVGGLN*WPRSGR
Trigger: CCTACCGCTGCGTGGCCACCAATTCAGCCCGCCAAC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGCGTGCGGGGCTTGTTaGCTCGGCAGACATAGACTC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVACGAC*LGRHRL
Trigger: GAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGTGTATGCACCAGGGCTaGGCTGGAGGTTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRCMHQG*AGGSAG
Trigger: GCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACA...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCAGCGGCGTGGCTGTaGCCCGAGTCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSAAWL*PESGRW
Trigger: CCAGCGCCCCGACTCGGGTCACAGCCACGCCGCTGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGCGCCTTCTCCGTCTTaGCCTTCCACACAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRAPSPS*PSTQQR
Trigger: ACGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACTTCCACCTGATTCCTaGAGGCTGGGGACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVLPPDS*RLGTAS
Trigger: AGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACCTGCCCAGCCAGTCTaGTCCTTGAGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVPAQPV*SLRQIH
Trigger: GTGGATCTGTCTCAAGGAGCAGACTGGCTGGGCAGG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATTGACAGTTGTCTCCTaGGGCAATGGCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVLTVVS*GNGSSP
Trigger: CGGGGAGCTGCCATTGCCCCAGGAGACAACTGTCAA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGTCCAGACACTACCGTaGTGTTCTCTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVVQTLP*CSLGLP
Trigger: TGGCAGCCCCAGAGAACACCACGGTAGTGTCTGGAC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGTGTATGCACCAGGGCTaGGCTGGAGGTTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWCMHQG*AGGSAG
Trigger: GCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACA...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCTTGGACCACTACCCTaGGGCAGCTCACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWLGPLP*GSSQPA
Trigger: GGCAGGCTGTGAGCTGCCCCAGGGTAGTGGTCCAAG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAATAGCAGTGCTGGGCTaGAGGTCTGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVIAVLG*RSEQEQ
Trigger: CTGCTCCTGCTCAGACCTCCAGCCCAGCACTGCTAT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CAA 72 bp TGCTGTGGTAGGCTGCGGTGTCATAGGCCCGTGGAGTaGACTGGCACTCTGCTCAGCACAGCTGACAGAAGA +
Preference number: 4 (lower is better)
Translates to: CCGRLRCHRPVE*TGTLLSTADRR
Trigger: TCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGTCAACTCCACGGGCCTATGACACCGCAGCCTACCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTCAGCGGCGTGGCTGTaGCCCGAGTCGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDSAAWL*PESGRW
Trigger: CCAGCGCCCCGACTCGGGTCACAGCCACGCCGCTGA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACTTGTCTTCCACATCTaGGGGTGGTGGGGACCAATC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVLVFHI*GWWGPI
Trigger: GATTGGTCCCCACCACCCTCAGATGTGGAAGACAAG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGTGGCCCCGGCAATCTaGAACACTGCCACCCATAAG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRVAPAI*NTATHK
Trigger: CTTATGGGTGGCAGTGTTTCAGATTGCCGGGGCCAC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAATGATTTGCTCGCTGTaGAACTCAGGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVMICSL*NSGRSQ
Trigger: CTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCAT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATCACCTCGTACAGCCTaGCAGGGACTAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVSPRTA*QGLTGS
Trigger: TGACCCAGTTAGTCCCTGGCAGGCTGTACGAGGTGA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATTCTCCTCCACAATCTaGGACTCGGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVFSSTI*DSGCRE
Trigger: CTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGRTQKG*GQQRPR
Trigger: GCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTGCGTGCGGGGCTTGTTaGCTCGGCAGACATAGACTC +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGACGAC*LGRHRL
Trigger: GAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGC...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCTGGACAAGGTAAGCTaGGGTGCTGCGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWLDKVS*GAALGT
Trigger: TGTCCCCAGCGCAGCACCCCAGCTTACCTTGTCCAG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGGGGCAAAGGGAACATaGCTCTGGTTGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVGAKGT*LWLCTP
Trigger: TGGTGTGCACAACCAGAGCCATGTTCCCTTTGCCCC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGCTGATTCCTGCAGGCTaGGGACGGCTTCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRLIPAG*GRLLSP
Trigger: GGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAG...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAAGTCTCTGCAGTCAGTaGTTCCTCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVSLCSQ*FLWLQV
Trigger: GACCTGGAGCCAGAGGAACCACTGACTGCAGAGACT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCCACTGGTTGTTGGTTaGCACCCTCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWPLVVG*HPPSSL
Trigger: CAGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTCCACTGGTTGTTGGTTaGCACCCTCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGPLVVG*HPPSSL
Trigger: CAGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGG...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACCAGGGAAGCATTCCTaGGCCCCCAGGGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKPGKHS*APRGRS
Trigger: GCTTCGGCCCCTGGGGGCTCAGGAATGCTTCCCTGG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGAGCCAGTCTGCTCCTTaGGACAGATCCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRSQSAP*DRSTAP
Trigger: TGGAGCTGTGGATCTGTCTCAAGGAGCAGACTGGCT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGTCCAGGTCCCGAACCTaGAGCTCTGTGGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRSRSRT*SSVVSL
Trigger: CAATGACACCACAGAGCTGCAGGTTCGGGACCTGGA...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGGCAGGGGCAGCCATaGCACCCTGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPGQGQP*HPDVRG
Trigger: CCCTCGGACATCAGGGTGGCATGGCTGCCCCTGCCC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGGGCAGGGGCAGCCATaGCACCCTGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKGQGQP*HPDVRG
Trigger: CCCTCGGACATCAGGGTGGCATGGCTGCCCCTGCCC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGTCCTGGGGACGAGGATaGACGAGGGACTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWSWGRG*TRDSNS
Trigger: TGAGTTGGAGTCCCTCGTGCATCCTCGTCCCCAGGA...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCCTGGGGACGAGGATaGACGAGGGACTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSWGRG*TRDSNS
Trigger: TGAGTTGGAGTCCCTCGTGCATCCTCGTCCCCAGGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATGTCTCCTGGGGCAATaGCAGCTCCCCGCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPCLLGQ*QLPARG
Trigger: TCCGCGCGCGGGGAGCTGCCATTGCCCCAGGAGACA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTGGGCTGGAAGGCCCTTaGTGTGGCATTCAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGGLEGP*CGIQSV
Trigger: CACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCC...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCTGTTTGACTCTGCGTaGACATGGGCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWLFDSA*TWAGGS
Trigger: GCTGCCTCCTGCCCATGTCCACGCAGAGTCAAACAG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGAGTCAGTGGTTCCTCTaGCTCCAGGTCTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRSQWFL*LQVLEV
Trigger: CACCTCCAAGACCTGGAGCCAGAGGAACCACTGACT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGATAGCAGTGCTGGGCTaGAGGTCTGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWIAVLG*RSEQEQ
Trigger: CTGCTCCTGCTCAGACCTCCAGCCCAGCACTGCTAT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAAGGGGGCGGCTGCCATaGCACCACCAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKRGRLP*HHQGLH
Trigger: ATGGAGTCCCTGGTGGTGTCATGGCAGCCGCCCCCT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGTTTCAGGCCGCCAATaGGAATGTCTTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRVSGRQ*ECLLQS
Trigger: GCTCTGGAGAAGACATTCTCATTGGCGGCCTGAAAC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCAGTGTCTCCATCCTTaGTCCATGTCACCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWQCLHP*SMSPWS
Trigger: CGACCAGGGTGACATGGAGCAAGGATGGAGACACTG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAACACGAAGCGCGCGGTaGTGGCCCGCGTCCGCGAGA +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSETRSAR*WPASAR
Trigger: TCTCGCGGACGCGGGCCAGCACCGCGCGCTTCGTGT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCCCGCGCTGTTTTCTaGTACGCACTGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSRAVF*YALVVA
Trigger: GGCTACTACCAGTGCGTAGCAGAAAACAGCGCGGGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGCCTGCCCAGGAGCCTaGCCAGTTTGGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDACPGA*PVWSPC
Trigger: GCAGGGGGACCAAACTGGGCAGGCTCCTGGGCAGGC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTGTCTCCTGGGGCAATaGCAGCTCCCCGCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDCLLGQ*QLPARG
Trigger: TCCGCGCGCGGGGAGCTGCCATTGCCCCAGGAGACA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTTCTCCTCCACAATCTaGGACTCGGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGFSSTI*DSGCRE
Trigger: CTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTACCGTGGTGTTCTCTaGGGCTGCCACAATGACCAC +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGYRGVL*GCHNDH
Trigger: GTGGTCATTGTGGCAGCCCCAGAGAACACCACGGTA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGCACCAGGGCTGGGCTaGAGGTTCGGCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVAPGLG*RFGWPP
Trigger: TGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGTGTAACCGAACGGTaGATGGTGTCAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSVTER*MVSGGS
Trigger: TGAGCCCCCTGACACCATCCACCGTTCGGTTACACT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGGAGCCTGCCCAGTTTaGTCCCCCTGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKGACPV*SPCLSP
Trigger: TGGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACCTGCCCGGTTCCCGCTaGAGGCAGCAGAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDLPGSR*RQQSTG
Trigger: ACCCGTGCTCTGCTGCCTCCAGCGGGAACCGGGCAG...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGAGTCTCTGCAGTCAGTaGTTCCTCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWSLCSQ*FLWLQV
Trigger: GACCTGGAGCCAGAGGAACCACTGACTGCAGAGACT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACCAGGGAAGCATTCCTaGGCCCCCAGGGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVPGKHS*APRGRS
Trigger: GCTTCGGCCCCTGGGGGCTCAGGAATGCTTCCCTGG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTGTTTCCCTCTGTGGTaGGCAGTGTCCACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGCFPLW*AVSTGV
Trigger: AACACCAGTGGACACTGCTCACCACAGAGGGAAACA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTGCGGGCTCCCATCTTaGAGAAATACCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGCGLPS*RNTECH
Trigger: GTGACACTCGGTATTTCTTCAAGATGGGAGCCCGCA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCACTTCTGGCAAGCAGGTaGGCCTCTCTGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPLLASR*ASLAHW
Trigger: CCAGTGGGCCAGAGAGGCTCACCTGCTTGCCAGAAG...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGTCGGTGGAGAAAACCTaGTCTTCCTTCCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWSVEKT*SSFPKP
Trigger: CGGTTTGGGGAAGGAAGATCAGGTTTTCTCCACCGA...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATGGCGAAATCACGCGTaGGGGGCTTGTTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKWRNHA*GACWLG
Trigger: GCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGGGCAGGGGCAGCCATaGCACCCTGATGTCCGAGGG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEGQGQP*HPDVRG
Trigger: CCCTCGGACATCAGGGTGGCATGGCTGCCCCTGCCC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTGCCGCCACCGCCCTaGACCTTGACGCGCATTGGG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLPPPP*TLTRIG
Trigger: CCCAATGCGCGTCAAGGTGCAGGGCGGTGGCGGCAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATGCTCCATGTCACCCTaGTCGGAGGCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKCSMSP*SEAQQL
Trigger: CAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGTGGACATCTAGGATCTaGAGGACGCCATTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRWTSRI*RTPLGR
Trigger: TCTTCCCAATGGCGTCCTCCAGATCCTAGATGTCCA...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCCTGCATCACTGTCCTaGACATCTAGGATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWPASLS*TSRIWR
Trigger: CCTCCAGATCCTAGATGTCCAGGACAGTGATGCAGG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGACTCATAATCCGTGTTaGGTTCCAGGTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRTHNPC*VPGPEP
Trigger: AGGTTCGGGACCTGGAACCCAACACGGATTATGAGT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGGCTGGAGGTTCGGCTaGCCCCCAGCTGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGGWRFG*PPAGSR
Trigger: CCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGGCAGGAGGCAGCGGTaGCCCCCTCTGGATAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGGRRQR*PPLDRQ
Trigger: CTGCCTATCCAGAGGGGGCCACCGCTGCCTCCTGCC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGACTCTGCGTGGACATaGGCAGGAGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDDSAWT*AGGSGG
Trigger: GCCACCGCTGCCTCCTGCCCATGTCCACGCAGAGTC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGCCGGTCAGGCAGGGTaGAGCGTTCTACGACGGAGC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDAGQAG*SVLRRS
Trigger: GCTCCGTCGTAGAACGCTCCACCCTGCCTGACCGGC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGGGCAGCAGGGACACTaGGGGGCCCAAGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVGQQGH*GAQVEL
Trigger: GAGCTCGACTTGGGCCCCCCAGTGTCCCTGCTGCCC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGGGCAGCAGGGACACTaGGGGGCCCAAGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGGQQGH*GAQVEL
Trigger: GAGCTCGACTTGGGCCCCCCAGTGTCCCTGCTGCCC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGAATCGTTGGCGGGCTaGATTGGTGGCCACGCAGCG +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDESLAG*IGGHAA
Trigger: CGCTGCGTGGCCACCAATTCAGCCCGCCAACGATTC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTGGGGCTGCCACAATaGCCACATCCTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLGLPQ*PHPAPW
Trigger: CCAGGGGGCAGGATGTGGTCATTGTGGCAGCCCCAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCAGCACCACAGCCTaGTCAGGGCCCAGGATCACT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSSTTA*SGPRIT
Trigger: AGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCCATTGGGTAGCAGGTaGAGGTTCTCATGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWPLGSR*RFSCSS
Trigger: ACTAGAGCATGAGAACCTGCACCTGCTACCCAATGG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATACACGAAGCGCGCGGTaGTGGCCCGCGTCCGCGAGA +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNTRSAR*WPASAR
Trigger: TCTCGCGGACGCGGGCCAGCACCGCGCGCTTCGTGT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTACACGAAGCGCGCGGTaGTGGCCCGCGTCCGCGAGA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSTRSAR*WPASAR
Trigger: TCTCGCGGACGCGGGCCAGCACCGCGCGCTTCGTGT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCAGCACCTGTCCATTaGTCAGGCTGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSAPVH*SGWRAG
Trigger: CCCTGCCCTCCAGCCTGAGCAATGGACAGGTGCTGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGCCTGCCCAGGAGCCTaGCCAGTTTGGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYACPGA*PVWSPC
Trigger: GCAGGGGGACCAAACTGGGCAGGCTCCTGGGCAGGC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGTCAGGCACGGTCACCTaGTCCTTTTCCCAAGTAATG +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWSGTVT*SFSQVM
Trigger: CATTACTTGGGAAAAGGACCAGGTGACCGTGCCTGA...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGGCGGGCTGAATTGGTaGCCACGCAGCGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVGGLNW*PRSGRS
Trigger: GCTCCTACCGCTGCGTGGCCACCAATTCAGCCCGCC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGACTCATAATCCGTGTTaGGTTCCAGGTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWTHNPC*VPGPEP
Trigger: AGGTTCGGGACCTGGAACCCAACACGGATTATGAGT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGCTGGAGGTTCGGCTaGCCCCCAGCTGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGWRFG*PPAGSR
Trigger: CCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAATCCAGAGATCTGGGTaGGGTGAGGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVIQRSG*GEGAAA
Trigger: GGCAGCCGCCCCCTCACCCCACCCAGATCTCTGGAT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCTGCCAGGGACTAACTaGGTCAGTTCATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWLPGTN*VSSYCF
Trigger: GAAGCAGTATGAACTGACCCAGTTAGTCCCTGGCAG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGACTCTGCGTGGACATaGGCAGGAGGCAGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEDSAWT*AGGSGG
Trigger: GCCACCGCTGCCTCCTGCCCATGTCCACGCAGAGTC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTGACAGTGGTAAAGTCTaGCTTCTTCCACCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGDSGKV*LLPPKP
Trigger: TGGCTTCGGTGGAAGAAGCCAGACTTTACCACTGTC...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGCCGGTCAGGCAGGGTaGAGCGTTCTACGACGGAGC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGAGQAG*SVLRRS
Trigger: GCTCCGTCGTAGAACGCTCCACCCTGCCTGACCGGC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCACTCTCTAGGCCATaGACCTCTGCACTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSLSRP*TSALKM
Trigger: CATCTTCAGTGCAGAGGTCCATGGCCTAGAGAGTGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAAGGGACTCCAACTCATaGGCAGCAGGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPRDSNS*AAGTLG
Trigger: CCCCAGTGTCCCTGCTGCCCATGAGTTGGAGTCCCT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGGAGCCTGCCCAGTTTaGTCCCCCTGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGGACPV*SPCLSP
Trigger: TGGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGCCTCTCTGGCCCACTaGTTGTTGGTTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKASLAH*LLVGTL
Trigger: GAGGGTGCCAACCAACAACCAGTGGGCCAGAGAGGC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGAATCGTTGGCGGGCTaGATTGGTGGCCACGCAGCG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVESLAG*IGGHAA
Trigger: CGCTGCGTGGCCACCAATTCAGCCCGCCAACGATTC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCCAGGGAAGCATTCCTaGGCCCCCAGGGGCCGAAGC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSPGKHS*APRGRS
Trigger: GCTTCGGCCCCTGGGGGCTCAGGAATGCTTCCCTGG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGTCAGAAGGAGGTGTTaGAGGCCGGTCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDVRRRC*RPVRQG
Trigger: ACCCTGCCTGACCGGCCTTCAACACCTCCTTCTGAC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGTTTCCTGGGGTGCCTaGGGAGGACAATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVVSWGA*GGQSGQ
Trigger: CTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAAC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACACCTCAGCTTCCACCTaGTTCCTGCAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDTSAST*FLQAGD
Trigger: GTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGT...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTTCTGGCAAGCAGGTaGGCCTCTCTGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLLASR*ASLAHW
Trigger: CCAGTGGGCCAGAGAGGCTCACCTGCTTGCCAGAAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACTTCTGGCAAGCAGGTaGGCCTCTCTGGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVLLASR*ASLAHW
Trigger: CCAGTGGGCCAGAGAGGCTCACCTGCTTGCCAGAAG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATGGGAAGGCTTGGGCTaGCTGTTAGAGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPWEGLG*LLEDTG
Trigger: CCCTGTGTCCTCTAACAGTCAGCCCAAGCCTTCCCA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTCCAGCACCACAGCCTaGTCAGGGCCCAGGATCACT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDSSTTA*SGPRIT
Trigger: AGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTATGGCGAAATCACGCGTaGGGGGCTTGTTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVWRNHA*GACWLG
Trigger: GCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCA...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAACATCGTCCAGTGTATaGACCAGGGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKTSSSV*TRAGLE
Trigger: CTCCAGCCCAGCCCTGGTGCATACACTGGACGATGT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAACATCGTCCAGTGTATaGACCAGGGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPTSSSV*TRAGLE
Trigger: CTCCAGCCCAGCCCTGGTGCATACACTGGACGATGT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTCAGCACCTGTCCATTaGTCAGGCTGGAGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDSAPVH*SGWRAG
Trigger: CCCTGCCCTCCAGCCTGAGCAATGGACAGGTGCTGA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTATGGGTCAGTTCATACTaGTTCACTTTCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVWVSSY*FTFFFS
Trigger: GCTGAAGAAGAAAGTGAAGCAGTATGAACTGACCCA...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGCTGGGTGTGGTTGTTaGTGTAGAGAATTAGATACT +
Preference number: 4 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVAGCGC*CRELDT
Trigger: AGTATCTAATTCTCTACAGCAACAACCACACCCAGC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCTGGGGACGAGGATaGACGAGGGACTCCAACTCA +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSWGRG*TRDSNS
Trigger: TGAGTTGGAGTCCCTCGTGCATCCTCGTCCCCAGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACCAGTTTGGTCCCCCTaGCTGAGCCCAGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKPVWSP*LSPGDL
Trigger: AAGATCTCCTGGGCTCAGGCAGGGGGACCAAACTGG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGCCTGCCCAGGAGCCTaGCCAGTTTGGTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNACPGA*PVWSPC
Trigger: GCAGGGGGACCAAACTGGGCAGGCTCCTGGGCAGGC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGGCAGCTCACAGCCTaGCCAGGAGCCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGQLTA*PGACPV
Trigger: AACTGGGCAGGCTCCTGGGCAGGCTGTGAGCTGCCC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACTTCCACCTGATTCCTaGAGGCTGGGGACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKLPPDS*RLGTAS
Trigger: AGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACCTGCCCAGCCAGTCTaGTCCTTGAGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKPAQPV*SLRQIH
Trigger: GTGGATCTGTCTCAAGGAGCAGACTGGCTGGGCAGG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTGCTCCATGTCACCCTaGTCGGAGGCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGCSMSP*SEAQQL
Trigger: CAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATCCACAGCAACCTGGCTaGCCACCACTCCTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYPQQPG*PPLLAG
Trigger: GCCCGCTAGGAGTGGTGGCCAGCCAGGTTGCTGTGG...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGGGCTGGAAGGCCCTTaGTGTGGCATTCAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKGLEGP*CGIQSV
Trigger: CACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCCTGGCTGAATCGTTaGCGGGCTGAATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSWLNR*RAELVA
Trigger: GGCCACCAATTCAGCCCGCCAACGATTCAGCCAGGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGTTCCAGGCACCTCGGTaGAGAAAACCTGATCTTCTT +
Preference number: 4 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWFQAPR*RKPDLL
Trigger: AAGAAGATCAGGTTTTCTCCACCGAGGTGCCTGGAA...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000035499.5
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACTGTTTGACTCTGCGTaGACATGGGCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKLFDSA*TWAGGS
Trigger: GCTGCCTCCTGCCCATGTCCACGCAGAGTCAAACAG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCACTGTTTGACTCTGCGTaGACATGGGCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPLFDSA*TWAGGS
Trigger: GCTGCCTCCTGCCCATGTCCACGCAGAGTCAAACAG...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCCACCGAAGCCAAATaGAAGTGGAGCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSTEAK*KWSCLT
Trigger: AGTCAAACAGCTCCACTTCCATTTGGCTTCGGTGGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGCCGGTCAGGCAGGGTaGAGCGTTCTACGACGGAGC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYAGQAG*SVLRRS
Trigger: GCTCCGTCGTAGAACGCTCCACCCTGCCTGACCGGC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCTGCCCGGTTCCCGCTaGAGGCAGCAGAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSLPGSR*RQQSTG
Trigger: ACCCGTGCTCTGCTGCCTCCAGCGGGAACCGGGCAG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCTGCCCGGTTCCCGCTaGAGGCAGCAGAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLPGSR*RQQSTG
Trigger: ACCCGTGCTCTGCTGCCTCCAGCGGGAACCGGGCAG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCACAGGGCTTTGGGCTaGCAGCTTTTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGHRALG*QLFPGA
Trigger: GGCCCCTGGGAAAAGCTGCCAGCCCAAAGCCCTGTG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCTGGGGCTGCCACAATaGCCACATCCTGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSLGLPQ*PHPAPW
Trigger: CCAGGGGGCAGGATGTGGTCATTGTGGCAGCCCCAG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATAGGGGGCGGCTGCCATaGCACCACCAGGGACTCCAT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNRGRLP*HHQGLH
Trigger: ATGGAGTCCCTGGTGGTGTCATGGCAGCCGCCCCCT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGTCAGAAGGAGGTGTTaGAGGCCGGTCAGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGVRRRC*RPVRQG
Trigger: ACCCTGCCTGACCGGCCTTCAACACCTCCTTCTGAC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACCTTCCTTCTTACTCTaGTCCTCACCCTGTCGGACC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKPSFLL*SSPCRT
Trigger: GGTCCGACAGGGTGAGGATCAGAGTAAGAAGGAAGG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCCGCGCTGTTTTCTaGTACGCACTGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSRAVF*YALVVA
Trigger: GGCTACTACCAGTGCGTAGCAGAAAACAGCGCGGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCCCGCGCTGTTTTCTaGTACGCACTGGTAGTAGCC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSRAVF*YALVVA
Trigger: GGCTACTACCAGTGCGTAGCAGAAAACAGCGCGGGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCAGGTCCCGAACCTaGAGCTCTGTGGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSRSRT*SSVVSL
Trigger: CAATGACACCACAGAGCTGCAGGTTCGGGACCTGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCACCTCGTACAGCCTaGCAGGGACTAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSPRTA*QGLTGS
Trigger: TGACCCAGTTAGTCCCTGGCAGGCTGTACGAGGTGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCGCCTTCTCCGTCTTaGCCTTCCACACAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEAPSPS*PSTQQR
Trigger: ACGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTGGGTTTCCTGGGGTaGCTGAGGAGGACAATCCGG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLGFLG*LRRTIR
Trigger: CCGGATTGTCCTCCTCAGGCACCCCAGGAAACCCAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGGCAGCTCACAGCCTaGCCAGGAGCCTGCCCAGTT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGQLTA*PGACPV
Trigger: AACTGGGCAGGCTCCTGGGCAGGCTGTGAGCTGCCC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSYTRA*SSSVCP
Trigger: CGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSYTRA*SSSVCP
Trigger: CGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCCACAGCAACCTGGCTaGCCACCACTCCTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSPQQPG*PPLLAG
Trigger: GCCCGCTAGGAGTGGTGGCCAGCCAGGTTGCTGTGG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGCGGGCTGAATTGGTaGCCACGCAGCGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGGLNW*PRSGRS
Trigger: GCTCCTACCGCTGCGTGGCCACCAATTCAGCCCGCC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTCCTGGCTGAATCGTTaGCGGGCTGAATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDSWLNR*RAELVA
Trigger: GGCCACCAATTCAGCCCGCCAACGATTCAGCCAGGA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGTCCAGACACTACCGTaGTGTTCTCTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDVQTLP*CSLGLP
Trigger: TGGCAGCCCCAGAGAACACCACGGTAGTGTCTGGAC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGRTQKG*GQQRPR
Trigger: GCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGCACCAGGGCTGGGCTaGAGGTTCGGCTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHAPGLG*RFGWPP
Trigger: TGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGGGCAAAGGGAACATaGCTCTGGTTGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPGAKGT*LWLCTP
Trigger: TGGTGTGCACAACCAGAGCCATGTTCCCTTTGCCCC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTATCCAGAGATCTGGGTaGGGTGAGGGGGCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSIQRSG*GEGAAA
Trigger: GGCAGCCGCCCCCTCACCCCACCCAGATCTCTGGAT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGTGGGGACCAATCCTaGGGACGAGGATGCACGAGG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGGDQS*GRGCTR
Trigger: CCTCGTGCATCCTCGTCCCCAGGATTGGTCCCCACC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGCACCGAAGTCGGAGTaGACAATGACCTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPAPKSE*TMTSAS
Trigger: GGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGCACCGAAGTCGGAGTaGACAATGACCTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKAPKSE*TMTSAS
Trigger: GGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGTTTCAGGCCGCCAATaGGAATGTCTTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPVSGRQ*ECLLQS
Trigger: GCTCTGGAGAAGACATTCTCATTGGCGGCCTGAAAC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATGTTTCCCTCTGTGGTaGGCAGTGTCCACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKCFPLW*AVSTGV
Trigger: AACACCAGTGGACACTGCTCACCACAGAGGGAAACA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGTTTCCTGGGGTGCCTaGGGAGGACAATCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSVSWGA*GGQSGQ
Trigger: CTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAAC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACCTTGTCTTCCACATCTaGGGGTGGTGGGGACCAATC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDLVFHI*GWWGPI
Trigger: GATTGGTCCCCACCACCCTCAGATGTGGAAGACAAG...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGTGGCCCCGGCAATCTaGAACACTGCCACCCATAAG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVVAPAI*NTATHK
Trigger: CTTATGGGTGGCAGTGTTTCAGATTGCCGGGGCCAC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAAGTCGGAGTGGACAATaGCCTCAGCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSRSGQ*PQLPPD
Trigger: ATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAAGTCGGAGTGGACAATaGCCTCAGCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSRSGQ*PQLPPD
Trigger: ATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACAGCCAGTCTGCTCCTTaGGACAGATCCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDSQSAP*DRSTAP
Trigger: TGGAGCTGTGGATCTGTCTCAAGGAGCAGACTGGCT...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATGGGAAGGCTTGGGCTaGCTGTTAGAGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEWEGLG*LLEDTG
Trigger: CCCTGTGTCCTCTAACAGTCAGCCCAAGCCTTCCCA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCGGTGGAGAAAACCTaGTCTTCCTTCCCCAAACCG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSVEKT*SSFPKP
Trigger: CGGTTTGGGGAAGGAAGATCAGGTTTTCTCCACCGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAACAATGACCACATCCTaGCCCCTGGTAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPTMTTS*PLVASK
Trigger: TTTGGAGGCTACCAGGGGGCAGGATGTGGTCATTGT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTGGCGAAATCACGCGTaGGGGGCTTGTTGGCTCGGC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNWRNHA*GACWLG
Trigger: GCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGTGTCATTGTTTACTaGAAACTGGTACTCCACATT +
Preference number: 4 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGVIVY*KLVLHI
Trigger: AATGTGGAGTACCAGTTTGCAGTAAACAATGACACC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAACATCGTCCAGTGTATaGACCAGGGCTGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSETSSSV*TRAGLE
Trigger: CTCCAGCCCAGCCCTGGTGCATACACTGGACGATGT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGTAAGCTGGGGTGCTaGGCTGGGGACATCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGKLGC*AGDIVQ
Trigger: CTGGACGATGTCCCCAGCGCAGCACCCCAGCTTACC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGGGCGGTCACCATCTaGCTCCTCCTCTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGAVTI*LLLCSH
Trigger: GTGGGAACAGAGGAGGAGGCAGATGGTGACCGCCCC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAACCAGTTTGGTCCCCCTaGCTGAGCCCAGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEPVWSP*LSPGDL
Trigger: AAGATCTCCTGGGCTCAGGCAGGGGGACCAAACTGG...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACCAGTTTGGTCCCCCTaGCTGAGCCCAGGAGATCTT +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVPVWSP*LSPGDL
Trigger: AAGATCTCCTGGGCTCAGGCAGGGGGACCAAACTGG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGGAAGGCAGAGTCTCTaGAGTCAGTGGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDGRQSL*SQWFLW
Trigger: CCAGAGGAACCACTGACTGCAGAGACTCTGCCTTCC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTGTCTCCTGGGGCAATaGCAGCTCCCCGCGCGCGGA +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHCLLGQ*QLPARG
Trigger: TCCGCGCGCGGGGAGCTGCCATTGCCCCAGGAGACA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATTGACAGTTGTCTCCTaGGGCAATGGCAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSELTVVS*GNGSSP
Trigger: CGGGGAGCTGCCATTGCCCCAGGAGACAACTGTCAA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGGGCTGGAAGGCCCTTaGTGTGGCATTCAAAGCGTG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVGLEGP*CGIQSV
Trigger: CACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTACCGTGGTGTTCTCTaGGGCTGCCACAATGACCAC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDYRGVL*GCHNDH
Trigger: GTGGTCATTGTGGCAGCCCCAGAGAACACCACGGTA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGTCCAGACACTACCGTaGTGTTCTCTGGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVVQTLP*CSLGLP
Trigger: TGGCAGCCCCAGAGAACACCACGGTAGTGTCTGGAC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTGTATGCACCAGGGCTaGGCTGGAGGTTCGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNCMHQG*AGGSAG
Trigger: GCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAAAGGGAACATGGCTCTaGTTGTGCACACCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKKGTWL*LCTPGV
Trigger: GACACCTGGTGTGCACAACCAGAGCCATGTTCCCTT...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGGGCAGCAGGGACACTaGGGGGCCCAAGTCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHGQQGH*GAQVEL
Trigger: GAGCTCGACTTGGGCCCCCCAGTGTCCCTGCTGCCC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAGGGACTCCAACTCATaGGCAGCAGGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYRDSNS*AAGTLG
Trigger: CCCCAGTGTCCCTGCTGCCCATGAGTTGGAGTCCCT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGTGGGGACCAATCCTaGGGACGAGGATGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGGDQS*GRGCTR
Trigger: CCTCGTGCATCCTCGTCCCCAGGATTGGTCCCCACC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGGTGGGGACCAATCCTaGGGACGAGGATGCACGAGG +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSGGDQS*GRGCTR
Trigger: CCTCGTGCATCCTCGTCCCCAGGATTGGTCCCCACC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCAGGTCTTGGAGGTaGAGGTCAGGACATCCTTTG +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSRSWR*RSGHPL
Trigger: CAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCATAGCAGTGCTGGGCTaGAGGTCTGAGCAGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGIAVLG*RSEQEQ
Trigger: CTGCTCCTGCTCAGACCTCCAGCCCAGCACTGCTAT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCACAGGGCTTTGGGCTaGCAGCTTTTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNHRALG*QLFPGA
Trigger: GGCCCCTGGGAAAAGCTGCCAGCCCAAAGCCCTGTG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACTTGTCTTCCACATCTaGGGGTGGTGGGGACCAATC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVLVFHI*GWWGPI
Trigger: GATTGGTCCCCACCACCCTCAGATGTGGAAGACAAG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTACCTCAGCTTCCACCTaGTTCCTGCAGGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSTSAST*FLQAGD
Trigger: GTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCCAGCACCACAGCCTaGTCAGGGCCCAGGATCACT +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSSTTA*SGPRIT
Trigger: AGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACATCTGGGACTCGGGGTaGAGAGAGAAGTCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDIWDSG*REKSSS
Trigger: ACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGAT...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAGTGGCATTCAAAGCGTaGTGTCCCGTTCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVVAFKA*CPVLLH
Trigger: GTGGAGGAGAACGGGACAGCACGCTTTGAATGCCAC...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAATGATTTGCTCGCTGTaGAACTCAGGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVMICSL*NSGRSQ
Trigger: CTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCAT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCACATGGCTCTGGTTGTaGACACCAGGTGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGTWLWL*TPGVLC
Trigger: GCACAGGACACCTGGTGTGCACAACCAGAGCCATGT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGCGCCTTCTCCGTCTTaGCCTTCCACACAGCAGCGT +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSAPSPS*PSTQQR
Trigger: ACGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSESYTRA*SSSVCP
Trigger: CGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGGAAGGCAGAGTCTCTaGAGTCAGTGGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEGRQSL*SQWFLW
Trigger: CCAGAGGAACCACTGACTGCAGAGACTCTGCCTTCC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCACAGCAACCTGGCTaGCCACCACTCCTAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHPQQPG*PPLLAG
Trigger: GCCCGCTAGGAGTGGTGGCCAGCCAGGTTGCTGTGG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTTCTCCTCCACAATCTaGGACTCGGGGTGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGFSSTI*DSGCRE
Trigger: CTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAAGTAATGATGGGGGCTaGAAGGCCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVSNDGG*KALGVA
Trigger: TGCCACACCAAGGGCCTTCCAGCCCCCATCATTACT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAAGTAATGATGGGGGCTaGAAGGCCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSESNDGG*KALGVA
Trigger: TGCCACACCAAGGGCCTTCCAGCCCCCATCATTACT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCAGGCACGGTCACCTaGTCCTTTTCCCAAGTAATG +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSGTVT*SFSQVM
Trigger: CATTACTTGGGAAAAGGACCAGGTGACCGTGCCTGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGGCGGGCTGAATTGGTaGCCACGCAGCGGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHGGLNW*PRSGRS
Trigger: GCTCCTACCGCTGCGTGGCCACCAATTCAGCCCGCC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCTGGACAAGGTAAGCTaGGGTGCTGCGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSLDKVS*GAALGT
Trigger: TGTCCCCAGCGCAGCACCCCAGCTTACCTTGTCCAG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCTGGACAAGGTAAGCTaGGGTGCTGCGCTGGGGACA +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLDKVS*GAALGT
Trigger: TGTCCCCAGCGCAGCACCCCAGCTTACCTTGTCCAG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCACTGCCAGGGACTAACTaGGTCAGTTCATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPLPGTN*VSSYCF
Trigger: GAAGCAGTATGAACTGACCCAGTTAGTCCCTGGCAG...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACTGCCAGGGACTAACTaGGTCAGTTCATACTGCTTC +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKLPGTN*VSSYCF
Trigger: GAAGCAGTATGAACTGACCCAGTTAGTCCCTGGCAG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATAGGGACTCCAACTCATaGGCAGCAGGGACACTGGGG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNRDSNS*AAGTLG
Trigger: CCCCAGTGTCCCTGCTGCCCATGAGTTGGAGTCCCT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCACCGAAGTCGGAGTaGACAATGACCTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEAPKSE*TMTSAS
Trigger: GGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAAGTCAGTGGTTCCTCTaGCTCCAGGTCTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSESQWFL*LQVLEV
Trigger: CACCTCCAAGACCTGGAGCCAGAGGAACCACTGACT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATCCACAGCTCCAGACGTaGAAGGCAGAGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYPQLQT*KAESLQ
Trigger: CTGCAGAGACTCTGCCTTCCACGTCTGGAGCTGTGG...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCCACTGGTTGTTGGTTaGCACCCTCCCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSPLVVG*HPPSSL
Trigger: CAGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGCCTCTCTGGCCCACTaGTTGTTGGTTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNASLAH*LLVGTL
Trigger: GAGGGTGCCAACCAACAACCAGTGGGCCAGAGAGGC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGCCTCTCTGGCCCACTaGTTGTTGGTTGGCACCCTC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSASLAH*LLVGTL
Trigger: GAGGGTGCCAACCAACAACCAGTGGGCCAGAGAGGC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGAGGACACAGGGCTTTaGGCTGGCAGCTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYEDTGL*AGSFSQ
Trigger: CTGGGAAAAGCTGCCAGCCCAAAGCCCTGTGTCCTC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATTCCAGGCACCTCGGTaGAGAAAACCTGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPFQAPR*RKPDLP
Trigger: AGGAAGATCAGGTTTTCTCCACCGAGGTGCCTGGAA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGAATCGTTGGCGGGCTaGATTGGTGGCCACGCAGCG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHESLAG*IGGHAA
Trigger: CGCTGCGTGGCCACCAATTCAGCCCGCCAACGATTC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAAGAAGAGAGAAGCCAATaGTTTGCTCGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKEERSQ*FARCAT
Trigger: AGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTC...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTGCGGGCTCCCATCTTaGAGAAATACCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGCGLPS*RNTECH
Trigger: GTGACACTCGGTATTTCTTCAAGATGGGAGCCCGCA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGTGGCCCCGGCAATCTaGAACACTGCCACCCATAAG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNVAPAI*NTATHK
Trigger: CTTATGGGTGGCAGTGTTTCAGATTGCCGGGGCCAC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCAGTCGGAGTGGACAATaGCCTCAGCTTCCACCTGAT +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGSRSGQ*PQLPPD
Trigger: ATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACT...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTGGGAAGGCTTGGGCTaGCTGTTAGAGGACACAGGG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNWEGLG*LLEDTG
Trigger: CCCTGTGTCCTCTAACAGTCAGCCCAAGCCTTCCCA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAGGCTTTCCATCTGGTaGCAGAGAAGGAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYRLSIW*QRRSRL
Trigger: CAGCCTGCTCCTTCTCTGTCACCAGATGGAAAGCCT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACCCATTGGGTAGCAGGTaGAGGTTCTCATGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDPLGSR*RFSCSS
Trigger: ACTAGAGCATGAGAACCTGCACCTGCTACCCAATGG...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAATCTGGGACTCGGGGTaGAGAGAGAAGTCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVIWDSG*REKSSS
Trigger: ACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGAT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGTGGCATTCAAAGCGTaGTGTCCCGTTCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYVAFKA*CPVLLH
Trigger: GTGGAGGAGAACGGGACAGCACGCTTTGAATGCCAC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAACAATGACCACATCCTaGCCCCTGGTAGCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSETMTTS*PLVASK
Trigger: TTTGGAGGCTACCAGGGGGCAGGATGTGGTCATTGT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGGGGCGGTCACCATCTaGCTCCTCCTCTGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHGAVTI*LLLCSH
Trigger: GTGGGAACAGAGGAGGAGGCAGATGGTGACCGCCCC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATTCACCTCGTACAGCCTaGCAGGGACTAACTGGGTCA +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYSPRTA*QGLTGS
Trigger: TGACCCAGTTAGTCCCTGGCAGGCTGTACGAGGTGA...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCTTCCACCTGATTCCTaGAGGCTGGGGACGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLPPDS*RLGTAS
Trigger: AGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGAAGGCAGAGTCTCTaGAGTCAGTGGTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGRQSL*SQWFLW
Trigger: CCAGAGGAACCACTGACTGCAGAGACTCTGCCTTCC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCCTGCCCAGCCAGTCTaGTCCTTGAGACAGATCCAC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNPAQPV*SLRQIH
Trigger: GTGGATCTGTCTCAAGGAGCAGACTGGCTGGGCAGG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTGCTCCATGTCACCCTaGTCGGAGGCCCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHCSMSP*SEAQQL
Trigger: CAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAGTAATGATGGGGGCTaGAAGGCCCTTGGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYSNDGG*KALGVA
Trigger: TGCCACACCAAGGGCCTTCCAGCCCCCATCATTACT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGTTGGCGGGCTGAATTaGTGGCCACGCAGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHVGGLN*WPRSGR
Trigger: CCTACCGCTGCGTGGCCACCAATTCAGCCCGCCAAC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCCTGGCTGAATCGTTaGCGGGCTGAATTGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSWLNR*RAELVA
Trigger: GGCCACCAATTCAGCCCGCCAACGATTCAGCCAGGA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGGGCAAAGGGAACATaGCTCTGGTTGTGCACACCA +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGAKGT*LWLCTP
Trigger: TGGTGTGCACAACCAGAGCCATGTTCCCTTTGCCCC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATCCACCGAAGCCAAATaGAAGTGGAGCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPSTEAK*KWSCLT
Trigger: AGTCAAACAGCTCCACTTCCATTTGGCTTCGGTGGA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCCACCGAAGCCAAATaGAAGTGGAGCTGTTTGACT +
Preference number: 4 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKSTEAK*KWSCLT
Trigger: AGTCAAACAGCTCCACTTCCATTTGGCTTCGGTGGA...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCTTGGACCACTACCCTaGGGCAGCTCACAGCCTGCC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLGPLP*GSSQPA
Trigger: GGCAGGCTGTGAGCTGCCCCAGGGTAGTGGTCCAAG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCTGATTCCTGCAGGCTaGGGACGGCTTCTTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLIPAG*GRLLSP
Trigger: GGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATCCAGGTCTTGGAGGTaGAGGTCAGGACATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSESRSWR*RSGHPL
Trigger: CAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCCACAGCTCCAGACGTaGAAGGCAGAGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNPQLQT*KAESLQ
Trigger: CTGCAGAGACTCTGCCTTCCACGTCTGGAGCTGTGG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCCACAGCTCCAGACGTaGAAGGCAGAGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSPQLQT*KAESLQ
Trigger: CTGCAGAGACTCTGCCTTCCACGTCTGGAGCTGTGG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCACACATCCAAGGAGTCTaGGAATGTCTTTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPHIQGV*ECLLQS
Trigger: ACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTG...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAGCCAGTCTGCTCCTTaGGACAGATCCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSQSAP*DRSTAP
Trigger: TGGAGCTGTGGATCTGTCTCAAGGAGCAGACTGGCT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCAGTGTCTCCATCCTTaGTCCATGTCACCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNQCLHP*SMSPWS
Trigger: CGACCAGGGTGACATGGAGCAAGGATGGAGACACTG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGTGGCATTCAAAGCGTaGTGTCCCGTTCTCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSVAFKA*CPVLLH
Trigger: GTGGAGGAGAACGGGACAGCACGCTTTGAATGCCAC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATATGATTTGCTCGCTGTaGAACTCAGGCCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNMICSL*NSGRSQ
Trigger: CTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCAT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTCCAGGTCCCGAACCTaGAGCTCTGTGGTGTCATTG +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNSRSRT*SSVVSL
Trigger: CAATGACACCACAGAGCTGCAGGTTCGGGACCTGGA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCTGGGTTTCCTGGGGTaGCTGAGGAGGACAATCCGG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLGFLG*LRRTIR
Trigger: CCGGATTGTCCTCCTCAGGCACCCCAGGAAACCCAG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATCCTGCATCACTGTCCTaGACATCTAGGATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYPASLS*TSRIWR
Trigger: CCTCCAGATCCTAGATGTCCAGGACAGTGATGCAGG...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHRTQKG*GQQRPR
Trigger: GCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGCGTGCGGGGCTTGTTaGCTCGGCAGACATAGACTC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHACGAC*LGRHRL
Trigger: GAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAAGGGAACATGGCTCTaGTTGTGCACACCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYKGTWL*LCTPGV
Trigger: GACACCTGGTGTGCACAACCAGAGCCATGTTCCCTT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGACAGTGGTAAAGTCTaGCTTCTTCCACCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEDSGKV*LLPPKP
Trigger: TGGCTTCGGTGGAAGAAGCCAGACTTTACCACTGTC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACCTCGTACTTGGTAAATaGTTTCAGGCCGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDLVLGK*FQAANE
Trigger: CTCATTGGCGGCCTGAAACCATTTACCAAGTACGAG...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAGTGTAACCGAACGGTaGATGGTGTCAGGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSVTER*MVSGGS
Trigger: TGAGCCCCCTGACACCATCCACCGTTCGGTTACACT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTCACTCTCTAGGCCATaGACCTCTGCACTGAAGATG +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGSLSRP*TSALKM
Trigger: CATCTTCAGTGCAGAGGTCCATGGCCTAGAGAGTGA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTATCACTCTCTAGGCCATaGACCTCTGCACTGAAGATG +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVSLSRP*TSALKM
Trigger: CATCTTCAGTGCAGAGGTCCATGGCCTAGAGAGTGA...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACTGCATCACAGCCGCTaGTTTGAATCCCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KYQSGLALCGKMILGFSVLHHSR*FESLPS
Trigger: AGAAGGAAGGGATTCAAACCAGCGGCTGTGATGCAG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS-3UTR TCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGAAGAGAGAAGCCAATaGTTTGCTCGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEEERSQ*FARCAT
Trigger: AGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGTTTCAGGCCGCCAATaGGAATGTCTTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSVSGRQ*ECLLQS
Trigger: GCTCTGGAGAAGACATTCTCATTGGCGGCCTGAAAC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTGTTTCCCTCTGTGGTaGGCAGTGTCCACTGGTGTT +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSCFPLW*AVSTGV
Trigger: AACACCAGTGGACACTGCTCACCACAGAGGGAAACA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTGCGGGCTCCCATCTTaGAGAAATACCGAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSCGLPS*RNTECH
Trigger: GTGACACTCGGTATTTCTTCAAGATGGGAGCCCGCA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAAGGGAACATGGCTCTaGTTGTGCACACCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSKGTWL*LCTPGV
Trigger: GACACCTGGTGTGCACAACCAGAGCCATGTTCCCTT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCGAAGCCAAATGGAAGTaGAGCTGTTTGACTCTGCGT +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGEAKWK*SCLTLR
Trigger: ACGCAGAGTCAAACAGCTCCACTTCCATTTGGCTTC...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAACTCGTACTTGGTAAATaGTTTCAGGCCGCCAATGAG +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSELVLGK*FQAANE
Trigger: CTCATTGGCGGCCTGAAACCATTTACCAAGTACGAG...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CAA 72 bp ATGAAGAAACATACGGTGGTGTTGGCCGTGGCCACTTaGAATGCTATAGAAGTAGTTCAAGTGACAATCCTG +
Preference number: 4 (lower is better)
Translates to: MKKHTVVLAVAT*NAIEVVQVTIL
Trigger: CAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTCTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
3UTR CAA 72 bp TTGACCTTCAGAGCAATGAAGAAACATACGGTGGTGTaGGCCGTGGCCACTTTGAATGCTATAGAAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LTFRAMKKHTVV*AVATLNAIEVV
Trigger: AACTACTTCTATAGCATTCAAAGTGGCCACGGCCAACACCACCGTATGTTTCTTCATTGCTCTGAAGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGAAGAGAGAAGCCAATaGTTTGCTCGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYEERSQ*FARCAT
Trigger: AGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCGTCCTCGTGTTTGTTaGAAGCTACGAGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSRPRVC*KLRASP
Trigger: AGGTGAAGCTCGTAGCTTTCAACAAACACGAGGACG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATACATGGCTCTGGTTGTaGACACCAGGTGTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHTWLWL*TPGVLC
Trigger: GCACAGGACACCTGGTGTGCACAACCAGAGCCATGT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTGGGTCAGTTCATACTaGTTCACTTTCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDWVSSY*FTFFFS
Trigger: GCTGAAGAAGAAAGTGAAGCAGTATGAACTGACCCA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGCTGGGTGTGGTTGTTaGTGTAGAGAATTAGATACT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDAGCGC*CRELDT
Trigger: AGTATCTAATTCTCTACAGCAACAACCACACCCAGC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTGGACATCTAGGATCTaGAGGACGCCATTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSWTSRI*RTPLGR
Trigger: TCTTCCCAATGGCGTCCTCCAGATCCTAGATGTCCA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTACCGTGGTGTTCTCTaGGGCTGCCACAATGACCAC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHYRGVL*GCHNDH
Trigger: GTGGTCATTGTGGCAGCCCCAGAGAACACCACGGTA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGACAGTGGTAAAGTCTaGCTTCTTCCACCGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNDSGKV*LLPPKP
Trigger: TGGCTTCGGTGGAAGAAGCCAGACTTTACCACTGTC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATAGTCAGTGGTTCCTCTaGCTCCAGGTCTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHSQWFL*LQVLEV
Trigger: CACCTCCAAGACCTGGAGCCAGAGGAACCACTGACT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATAGTCTCTGCAGTCAGTaGTTCCTCTGGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHSLCSQ*FLWLQV
Trigger: GACCTGGAGCCAGAGGAACCACTGACTGCAGAGACT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTCGGTGGAGAAAACCTaGTCTTCTTCCTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNSVEKT*SSSFPK
Trigger: TTTGGGGAAGGAAGAAGATCAGGTTTTCTCCACCGA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000035499.5
CDS-3UTR TCA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATACACTTTGTTTGGCTaGAGTGAGTTTAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: AKTSLTASWRKLFATLKPYTLFG*SEFNVS
Trigger: ACTTACGTTAAACTCACTTCAGCCAAACAAAGTGTA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATATCTGGGACTCGGGGTaGAGAGAGAAGTCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHIWDSG*REKSSS
Trigger: ACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGAT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATGGGTCAGTTCATACTaGTTCACTTTCTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEWVSSY*FTFFFS
Trigger: GCTGAAGAAGAAAGTGAAGCAGTATGAACTGACCCA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCTGCATCACTGTCCTaGACATCTAGGATCTGGAGG +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHPASLS*TSRIWR
Trigger: CCTCCAGATCCTAGATGTCCAGGACAGTGATGCAGG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACTTGTTTACTGCAAACTaGTACTCCACATTGTCCACT +
Preference number: 4 (lower is better)
Translates to: FVDTALETLSECNKRLGDLFTAN*YSTLST
Trigger: AGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAA...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGAACCTGCAGCTCTGTaGTGTCATTGTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYEPAAL*CHCLLQ
Trigger: TTGCAGTAAACAATGACACCACAGAGCTGCAGGTTC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGAAGCCAAATGGAAGTaGAGCTGTTTGACTCTGCGT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNEAKWK*SCLTLR
Trigger: ACGCAGAGTCAAACAGCTCCACTTCCATTTGGCTTC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCGTCCTCGTGTTTGTTaGAAGCTACGAGCTTCACCT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHRPRVC*KLRASP
Trigger: AGGTGAAGCTCGTAGCTTTCAACAAACACGAGGACG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCACATCCAAGGAGTCTaGGAATGTCTTTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNHIQGV*ECLLQS
Trigger: ACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCATTGGGTAGCAGGTaGAGGTTCTCATGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHPLGSR*RFSCSS
Trigger: ACTAGAGCATGAGAACCTGCACCTGCTACCCAATGG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGGTGTCATTGTTTACTaGAAACTGGTACTCCACATT +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSEGVIVY*KLVLHI
Trigger: AATGTGGAGTACCAGTTTGCAGTAAACAATGACACC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGCTGGGTGTGGTTGTTaGTGTAGAGAATTAGATACT +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYAGCGC*CRELDT
Trigger: AGTATCTAATTCTCTACAGCAACAACCACACCCAGC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTGGACATCTAGGATCTaGAGGACGCCATTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHWTSRI*RTPLGR
Trigger: TCTTCCCAATGGCGTCCTCCAGATCCTAGATGTCCA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAATTGTTTACTGCAAACTaGTACTCCACATTGTCCACT +
Preference number: 4 (lower is better)
Translates to: LCKDFPYSILEETLCYSELFTAN*YSTLST
Trigger: AGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAA...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGAACCTGCAGCTCTGTaGTGTCATTGTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNEPAAL*CHCLLQ
Trigger: TTGCAGTAAACAATGACACCACAGAGCTGCAGGTTC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTGAACCTGCAGCTCTGTaGTGTCATTGTTTACTGCAA +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSEPAAL*CHCLLQ
Trigger: TTGCAGTAAACAATGACACCACAGAGCTGCAGGTTC...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATACTCATAATCCGTGTTaGGTTCCAGGTCCCGAACCT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHTHNPC*VPGPEP
Trigger: AGGTTCGGGACCTGGAACCCAACACGGATTATGAGT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTACACTTTGTTTGGCTaGAGTGAGTTTAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGYTLFG*SEFNVS
Trigger: ACTTACGTTAAACTCACTTCAGCCAAACAAAGTGTA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGGTGTCATTGTTTACTaGAAACTGGTACTCCACATT +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYGVIVY*KLVLHI
Trigger: AATGTGGAGTACCAGTTTGCAGTAAACAATGACACC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATTCTGAGAATGTCTTTTaGAGAGTAATCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYSENVF*RVITSC
Trigger: GCAGGATGTGATTACTCTGCAAAAGACATTCTCAGA...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATGAAGCCAAATGGAAGTaGAGCTGTTTGACTCTGCGT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHEAKWK*SCLTLR
Trigger: ACGCAGAGTCAAACAGCTCCACTTCCATTTGGCTTC...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATTACACTTTGTTTGGCTaGAGTGAGTTTAACGTAAGT +
Preference number: 4 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYYTLFG*SEFNVS
Trigger: ACTTACGTTAAACTCACTTCAGCCAAACAAAGTGTA...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR TCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCACATCCAAGGAGTCTaGGAATGTCTTTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHHIQGV*ECLLQS
Trigger: ACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR GCA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGAGAATGTCTTTTaGAGAGTAATCACATCCTGC +
Preference number: 4 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSSENVF*RVITSC
Trigger: GCAGGATGTGATTACTCTGCAAAAGACATTCTCAGA...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CCA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTTGTTTACTGCAAACTaGTACTCCACATTGTCCACT +
Preference number: 4 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLFTAN*YSTLST
Trigger: AGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp CGGGCCGTGGCTCCCCGGACGCCCGGCACACGAAGCGCGCGGTGCTaGCCCGCGTCCGCGAGAGCGCCTCGGGCGCCTGCGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: RAVAPRTPGTRSARC*PASARAPRAPARWL
Trigger: CAGCCATCTCGCAGGCGCCCGAGGCGCTCTCGCGGACGCGGGCCAGCACCGCGCGCTTCGTGTGCCGGGCGTCCGGGGAGCCACGGCCCG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GGGTCGCAACGGGATCCCGTCGTGCAGCCAGTGCAGCGCGGGCCGTaGCTCCCCGGACGCCCGGCACACGAAGCGCGCGGTGCTGGCCCG +
Preference number: 5 (lower is better)
Translates to: GSQRDPVVQPVQRGP*LPGRPAHEARGAGP
Trigger: CGGGCCAGCACCGCGCGCTTCGTGTGCCGGGCGTCCGGGGAGCCACGGCCCGCGCTGCACTGGCTGCACGACGGGATCCCGTTGCGACCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp AAGCGCGCGGTGCTGGCCCGCGTCCGCGAGAGCGCCTCGGGCGCCTaGGAGATGGCTGGGGCAGCAAGCACTCGGAGCTCAGCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: KRAVLARVRESASGA*EMAGAASTRSSAAA
Trigger: TGCGGCTGCTGAGCTCCGAGTGCTTGCTGCCCCAGCCATCTCGCAGGCGCCCGAGGCGCTCTCGCGGACGCGGGCCAGCACCGCGCGCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp CCCTGCACCTTGACGCGCCCATTGGGTCGCAACGGGATCCCGTCGTaGAGCCAGTGCAGCGCGGGCCGTGGCTCCCCGGACGCCCGGCAC +
Preference number: 5 (lower is better)
Translates to: PCTLTRPLGRNGIPS*SQCSAGRGSPDARH
Trigger: GTGCCGGGCGTCCGGGGAGCCACGGCCCGCGCTGCACTGGCTGCACGACGGGATCCCGTTGCGACCCAATGGGCGCGTCAAGGTGCAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS TCA 90 bp GCTCCCAGGCCACCAGCACAGAGGAGCTGCTCAGCGGCGTGGCTGTaGCCCGAGTCGGGGCGCTGGGCAGCCCCTCGCGCACCACTACCG +
Preference number: 5 (lower is better)
Translates to: APRPPAQRSCSAAWL*PESGRWAAPRAPLP
Trigger: CGGTAGTGGTGCGCGAGGGGCTGCCCAGCGCCCCGACTCGGGTCACAGCCACGCCGCTGAGCAGCTCCTCTGTGCTGGTGGCCTGGGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp TTGACGCGCCCATTGGGTCGCAACGGGATCCCGTCGTGCAGCCAGTaGAGCGCGGGCCGTGGCTCCCCGGACGCCCGGCACACGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LTRPLGRNGIPSCSQ*SAGRGSPDARHTKR
Trigger: GCGCTTCGTGTGCCGGGCGTCCGGGGAGCCACGGCCCGCGCTGCACTGGCTGCACGACGGGATCCCGTTGCGACCCAATGGGCGCGTCAA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS CCA 90 bp GGAGGCAGCAGAGCACGGGTCAGAGCCGGCCTTGGACCACTACCCTaGGGCAGCTCACAGCCTGCCCAGGAGCCTGCCCAGTTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GGSRARVRAGLGPLP*GSSQPAQEPAQFGP
Trigger: GGGACCAAACTGGGCAGGCTCCTGGGCAGGCTGTGAGCTGCCCCAGGGTAGTGGTCCAAGGCCGGCTCTGACCCGTGCTCTGCTGCCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp AGTGATGACCAAGCTGCCGCCACCGCCCTGCACCTTGACGCGCATTaGGTCGCAACGGGATCCCGTCGTGCAGCCAGTGCAGCGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SDDQAAATALHLDAH*VATGSRRAASAARA
Trigger: GGCCCGCGCTGCACTGGCTGCACGACGGGATCCCGTTGCGACCCAATGCGCGTCAAGGTGCAGGGCGGTGGCGGCAGCTTGGTCATCACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS CCA 90 bp GGAGCTCAGCAGCCGCAGTGGCGAAATCACGCGTGCGGGGCTTGTTaGCTCGGCAGACATAGACTCCAGAGTGCCGAGGCTGCGCGCTGG +
Preference number: 5 (lower is better)
Translates to: GAQQPQWRNHACGAC*LGRHRLQSAEAARW
Trigger: CCAGCGCGCAGCCTCGGCACTCTGGAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTGCTGAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GTGCTGCGCTGGGGACATCGTCCAGTGTATGCACCAGGGCTGGGCTaGAGGTTCGGCTGGCCCCCAGCTGGGAGTAGGCCACCACGTAGA +
Preference number: 5 (lower is better)
Translates to: VLRWGHRPVYAPGLG*RFGWPPAGSRPPRR
Trigger: TCTACGTGGTGGCCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACACTGGACGATGTCCCCAGCGCAGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp GGCCCAGCAGCTGTAGCCCCCAAAGTGCAGTCCAGCACCACAGCCTaGTCAGGGCCCAGGATCACTTGCAGGGGTCCCTCATCACAGCTC +
Preference number: 5 (lower is better)
Translates to: GPAAVAPKVQSSTTA*SGPRITCRGPSSQL
Trigger: GAGCTGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGACTGCACTTTGGGGGCTACAGCTGCTGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 90 bp GCGAGATGGCTGGGGCAGCAAGCACTCGGAGCTCAGCAGCCGCAGTaGCGAAATCACGCGTGCGGGGCTTGTTGGCTCGGCAGACATAGA +
Preference number: 5 (lower is better)
Translates to: ARWLGQQALGAQQPQ*RNHACGACWLGRHR
Trigger: TCTATGTCTGCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTGCTGAGCTCCGAGTGCTTGCTGCCCCAGCCATCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp TTTCCTGGGGTGCCTGAGGAGGACAATCCGGGCAGGGCTTCCCTGTaGGAGCTTCGTCGTAGGCCAGCACACATGCAGGCCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: FPGVPEEDNPGRASL*ELRRRPAHMQARRQ
Trigger: CTGCCTCCTGGCCTGCATGTGTGCTGGCCTACGACGAAGCTCCCACAGGGAAGCCCTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp ACTACCCTGGGGCAGCTCACAGCCTGCCCAGGAGCCTGCCCAGTTTaGTCCCCCTGCCTGAGCCCAGGAGATCTTTCTCTTGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: TTLGQLTACPGACPV*SPCLSPGDLSLGVA
Trigger: GGCCACTCCAAGAGAAAGATCTCCTGGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCCTGGGCAGGCTGTGAGCTGCCCCAGGGTAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GTCATATACCAGGGCTTGCAGCAGCAGTGTCTGCCCGGTTCCCGCTaGAGGCAGCAGAGCACGGGTCAGAGCCGGCCTTGGACCACTACC +
Preference number: 5 (lower is better)
Translates to: VIYQGLQQQCLPGSR*RQQSTGQSRPWTTT
Trigger: GGTAGTGGTCCAAGGCCGGCTCTGACCCGTGCTCTGCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp CCCAAGTCGAGCTCTTGTGTAGAGCGCTGGGTTTCCTGGGGTGCCTaGGGAGGACAATCCGGGCAGGGCTTCCCTGTGGGAGCTTCGTCG +
Preference number: 5 (lower is better)
Translates to: PKSSSCVERWVSWGA*GGQSGQGFPVGASS
Trigger: CGACGAAGCTCCCACAGGGAAGCCCTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAACCCAGCGCTCTACACAAGAGCTCGACTTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp CAGCAAGCACTCGGAGCTCAGCAGCCGCAGTGGCGAAATCACGCGTaGGGGGCTTGTTGGCTCGGCAGACATAGACTCCAGAGTGCCGAG +
Preference number: 5 (lower is better)
Translates to: QQALGAQQPQWRNHA*GACWLGRHRLQSAE
Trigger: CTCGGCACTCTGGAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTGCTGAGCTCCGAGTGCTTGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp TACCGCCAGGGGCGCAGCGGCACAGGCAGTTCCCGCGCTGTTTTCTaGTACGCACTGGTAGTAGCCAGCGTCCTGAAGGCCGATCTGAGT +
Preference number: 5 (lower is better)
Translates to: YRQGRSGTGSSRAVF*YALVVASVLKADLS
Trigger: ACTCAGATCGGCCTTCAGGACGCTGGCTACTACCAGTGCGTAGCAGAAAACAGCGCGGGAACTGCCTGTGCCGCTGCGCCCCTGGCGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GGACATCGTCCAGTGTATGCACCAGGGCTGGGCTGGAGGTTCGGCTaGCCCCCAGCTGGGAGTAGGCCACCACGTAGAACTCATAATCCG +
Preference number: 5 (lower is better)
Translates to: GHRPVYAPGLGWRFG*PPAGSRPPRRTHNP
Trigger: CGGATTATGAGTTCTACGTGGTGGCCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACACTGGACGATGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAAGGAGCCTGCCCAGTTaGGTCCCCCTGCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVRSLPS*VPLPEP
Trigger: GGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCCT...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp GACACTACCGTGGTGTTCTCTGGGGCTGCCACAATGACCACATCCTaGCCCCTGGTAGCCTCCAAAGACCCTCTGAGGGCCACAGTGAGC +
Preference number: 5 (lower is better)
Translates to: DTTVVFSGAATMTTS*PLVASKDPLRATVS
Trigger: GCTCACTGTGGCCCTCAGAGGGTCTTTGGAGGCTACCAGGGGGCAGGATGTGGTCATTGTGGCAGCCCCAGAGAACACCACGGTAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp TCAGGCGCAGGTCAGAAGGAGGTGTTGAAGGCCGGTCAGGCAGGGTaGAGCGTTCTACGACGGAGCCAAAGGGCCCATCCATATCCACTC +
Preference number: 5 (lower is better)
Translates to: SGAGQKEVLKAGQAG*SVLRRSQRAHPYPL
Trigger: GAGTGGATATGGATGGGCCCTTTGGCTCCGTCGTAGAACGCTCCACCCTGCCTGACCGGCCTTCAACACCTCCTTCTGACCTGCGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGGCGCCTTCTCCGTCTaGCCCTTCCACACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVGAFSV*PFHTAA
Trigger: CGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGCC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGAGGAGCCTGCCCAGTTaGGTCCCCCTGCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRRSLPS*VPLPEP
Trigger: GGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCCT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp ACTTCAGCCTTGTCTTCCACATCTGAGGGTGGTGGGGACCAATCCTaGGGACGAGGATGCACGAGGGACTCCAACTCATGGGCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: TSALSSTSEGGGDQS*GRGCTRDSNSWAAG
Trigger: CCCTGCTGCCCATGAGTTGGAGTCCCTCGTGCATCCTCGTCCCCAGGATTGGTCCCCACCACCCTCAGATGTGGAAGACAAGGCTGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGCGCCTTCTCCGTCTaGCCCTTCCACACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGAFSV*PFHTAA
Trigger: CGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGAGGAGCCTGCCCAGTTaGGTCCCCCTGCCTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWRSLPS*VPLPEP
Trigger: GGGCTCAGGCAGGGGGACCAAACTGGGCAGGCTCCT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTACTGGCCCACTGGTTGTaGGTTGGCACCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVLAHWL*VGTLPA
Trigger: AGCTGGGAGGGTGCCAACCAACAACCAGTGGGCCAG...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp AAAGTGCAGTCCAGCACCACAGCCTGCTCAGGGCCCAGGATCACTTaGAGGGGTCCCTCATCACAGCTCAGCTTGACAGTTGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: KVQSSTTACSGPRIT*RGPSSQLSLTVVSW
Trigger: CCAGGAGACAACTGTCAAGCTGAGCTGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGACTGCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 90 bp GGCTTCTTTCTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGGCAGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GFFLPLLFMASYTRA*SSSVCPVPAGGSRA
Trigger: TGCTCTGCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp CCATTGGGAAGAGTGATGAGCCGGGACTCCTCAGGCACGGTCACCTaGTCCTTTTCCCAAGTAATGATGGGGGCTGGAAGGCCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PLGRVMSRDSSGTVT*SFSQVMMGAGRPLV
Trigger: CACCAAGGGCCTTCCAGCCCCCATCATTACTTGGGAAAAGGACCAGGTGACCGTGCCTGAGGAGTCCCGGCTCATCACTCTTCCCAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp CTGTTCCCACCTCTCTCCAGTAGAGTTTGTATCCAGAGATCTGGGTaGGGTGAGGGGGCGGCTGCCATGACACCACCAGGGACTCCATCT +
Preference number: 5 (lower is better)
Translates to: LFPPLSSRVCIQRSG*GEGAAAMTPPGTPS
Trigger: AGATGGAGTCCCTGGTGGTGTCATGGCAGCCGCCCCCTCACCCCACCCAGATCTCTGGATACAAACTCTACTGGAGAGAGGTGGGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTACCTTGACGCGCCCATaGGGTCGCAACGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGTLTRP*GRNGIP
Trigger: CGGGATCCCGTTGCGACCCAATGGGCGCGTCAAGGT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGCCCACTGGTTGTTGGTaGGCACCCTCCCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRPTGCW*APSQLP
Trigger: AGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGGG...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp AGTAATGATGGGGGCTGGAAGGCCCTTGGTGTGGCATTCAAAGCGTaGTGTCCCGTTCTCCTCCACAATCTGGGACTCGGGGTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: SNDGGWKALGVAFKA*CPVLLHNLGLGVQR
Trigger: TCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCCATCATTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp GGCTTCTTTCTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGGCAGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: GFFLPLLFMASYTRA*SSSVCPVPAGGRFS
Trigger: TGAGAACCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CCA 90 bp GCACTCCATCACTACACTCTGTCCAGACACTACCGTGGTGTTCTCTaGGGCTGCCACAATGACCACATCCTGCCCCCTGGTAGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: ALHHYTLSRHYRGVL*GCHNDHILPPGSLQ
Trigger: TTGGAGGCTACCAGGGGGCAGGATGTGGTCATTGTGGCAGCCCCAGAGAACACCACGGTAGTGTCTGGACAGAGTGTAGTGATGGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GATTCCTGCAGGCTGGGGACGGCTTCTTTCTCCCGTTGCTCTTTATaGCGTCATATACCAGGGCTTGCAGCAGCAGTGTCTGCCCGGTTC +
Preference number: 5 (lower is better)
Translates to: DSCRLGTASFSRCSL*RHIPGLAAAVSARF
Trigger: GAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 90 bp GAAGGCAGAGTCTCTGCAGTCAGTGGTTCCTCTGGCTCCAGGTCTTaGAGGTGGAGGTCAGGACATCCTTTGGATGCACCGAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: EGRVSAVSGSSGSRS*RWRSGHPLDAPKSE
Trigger: CTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAGGAACCACTGACTGCAGAGACTCTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 90 bp TCTTACTCTGATCCTCACCCTGTCGGACCCAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGCACTCCATCACTACACTCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SYSDPHPVGPRTQKG*GQQRPRTPSLHSVQ
Trigger: CTGGACAGAGTGTAGTGATGGAGTGCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCTGGGTCCGACAGGGTGAGGATCAGAGTAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGCTGATGTCCGAGGGGTaGGGGCTGGACAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRLMSEG*GLDKVS
Trigger: GCTTACCTTGTCCAGCCCCAACCCCTCGGACATCAG...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp CCGTCTTGCCCTTCCACACAGCAGCGTAGCCGTCCTCGTGTTTGTTaGAAGCTACGAGCTTCACCTCGTACAGCCTGCCAGGGACTAACT +
Preference number: 5 (lower is better)
Translates to: PSCPSTQQRSRPRVC*KLRASPRTACQGLT
Trigger: AGTTAGTCCCTGGCAGGCTGTACGAGGTGAAGCTCGTAGCTTTCAACAAACACGAGGACGGCTACGCTGCTGTGTGGAAGGGCAAGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp TCAAAGCGTGCTGTCCCGTTCTCCTCCACAATCTGGGACTCGGGGTaGAGAGAGAAGTCTTCGAGTGTGGCAAGCTTGACCACAGCAACC +
Preference number: 5 (lower is better)
Translates to: SKRAVPFSSTIWDSG*REKSSSVASLTTAT
Trigger: GGTTGCTGTGGTCAAGCTTGCCACACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp ATGCCCGTGACGGCGTGCACATCCAAGGAGTCTGAGAATGTCTTTTaGAGAGTAATCACATCCTGCAAGCGGGAAAAGGGCCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: MPVTACTSKESENVF*RVITSCKREKGPGP
Trigger: GGGGCCTGGGCCCTTTTCCCGCTTGCAGGATGTGATTACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTGCACGCCGTCACGGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGAGGGCCCAGGATCACTaGCAGGGGTCCCTCATCACA +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWRAQDH*QGSLIT
Trigger: TGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCTGATGTCCGAGGGGTaGGGGCTGGACAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWLMSEG*GLDKVS
Trigger: GCTTACCTTGTCCAGCCCCAACCCCTCGGACATCAG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGGGAACATGGCTCTGGTaGTGCACACCAGGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRGTWLW*CTPGVL
Trigger: CAGGACACCTGGTGTGCACAACCAGAGCCATGTTCC...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTTCTCTGGCCCACTGGTaGTTGGTTGGCACCCTCCCA +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSLAHW*LVGTLP
Trigger: TGGGAGGGTGCCAACCAACAACCAGTGGGCCAGAGA...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGAGAGGACACAGGGCTTaGGGCTGGCAGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRRGHRA*GWQLFP
Trigger: TGGGAAAAGCTGCCAGCCCAAAGCCCTGTGTCCTCT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp CATTGTCCACTCCCCTTGCCTTTTGGTAGTGAAGAGAGAAGCCAATaGTTTGCTCGCTGTGCAACTCAGGCCGCTCCCAGGCCACCAGCA +
Preference number: 5 (lower is better)
Translates to: HCPLPLPFGSEERSQ*FARCATQAAPRPPA
Trigger: TGCTGGTGGCCTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTCACTACCAAAAGGCAAGGGGAGTGGACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp TTGGATGCACCGAAGTCGGAGTGGACAATGACCTCAGCTTCCACCTaGTTCCTGCAGGCTGGGGACGGCTTCTTTCTCCCGTTGCTCTTT +
Preference number: 5 (lower is better)
Translates to: LDAPKSEWTMTSAST*FLQAGDGFFLPLLF
Trigger: AAAGAGCAACGGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGCATCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 90 bp CTCTGGCTCCAGGTCTTGGAGGTGGAGGTCAGGACATCCTTTGGATaGACCGAAGTCGGAGTGGACAATGACCTCAGCTTCCACCTGATT +
Preference number: 5 (lower is better)
Translates to: LWLQVLEVEVRTSFG*TEVGVDNDLSFHLI
Trigger: AATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 90 bp TTGCTCTTTATGGCGTCATATACCAGGGCTTGCAGCAGCAGTGTCTaGCCGGTTCCCGCTGGAGGCAGGTTCTCATGCTCTAGTACAGTG +
Preference number: 5 (lower is better)
Translates to: LLFMASYTRACSSSV*PVPAGGRFSCSSTV
Trigger: CACTGTACTAGAGCATGAGAACCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CCA 90 bp TTGGTGTGGCATTCAAAGCGTGCTGTCCCGTTCTCCTCCACAATCTaGGACTCGGGGTGCAGAGAGAAGTCTTCGAGTGTGGCAAGCTTG +
Preference number: 5 (lower is better)
Translates to: LVWHSKRAVPFSSTI*DSGCREKSSSVASL
Trigger: CAAGCTTGCCACACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp TGGTCCTTTTCCCAAGTAATGATGGGGGCTGGAAGGCCCTTGGTGTaGCATTCAAAGCGTGCTGTCCCGTTCTCCTCCACAATCTGGGAC +
Preference number: 5 (lower is better)
Translates to: WSFSQVMMGAGRPLV*HSKRAVPFSSTIWD
Trigger: GTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCCATCATTACTTGGGAAAAGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp CCCCCAGCTGGGAGTAGGCCACCACGTAGAACTCATAATCCGTGTTaGGTTCCAGGTCCCGAACCTGCAGCTCTGTGGTGTCATTGTTTA +
Preference number: 5 (lower is better)
Translates to: PPAGSRPPRRTHNPC*VPGPEPAALWCHCL
Trigger: TAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACCCAACACGGATTATGAGTTCTACGTGGTGGCCTACTCCCAGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GAGCGTTCTACGACGGAGCCAAAGGGCCCATCCATATCCACTCCGTaGGACTGTACCGCAAACTCGTACTTGGTAAATGGTTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: ERSTTEPKGPSISTP*DCTANSYLVNGFRP
Trigger: CGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGAGTGGATATGGATGGGCCCTTTGGCTCCGTCGTAGAACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp TGCTGTAGAGAATTAGATACTCCACAATCTCACCATTGGGCTCCGTaGGGGGACACCAGTGTAACCGAACGGTGGATGGTGTCAGGGGGC +
Preference number: 5 (lower is better)
Translates to: CCRELDTPQSHHWAP*GDTSVTERWMVSGG
Trigger: GCCCCCTGACACCATCCACCGTTCGGTTACACTGGTGTCCCCCCACGGAGCCCAATGGTGAGATTGTGGAGTATCTAATTCTCTACAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACTGGCACTCTGCTCAGCACAGCTGACAGAAGAGGGGCTGGCGCTGTCTTTGTAGTGCGGGCTCCCATCTaGAAGAAATACCGAGTGTCA +
Preference number: 5 (lower is better)
Translates to: TGTLLSTADRRGAGAVFVVRAPI*KKYRVS
Trigger: TGACACTCGGTATTTCTTCAAGATGGGAGCCCGCAC...TACAAAGACAGCGCCAGCCCCTCTTCTGTCAGCTGTGCTGAGCAGAGTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWVIYQG*QQQCLP
Trigger: GGGCAGACACTGCTGCTGCAAGCCCTGGTATATGAC...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TCTTTTCCAGATCTACTTGGAGTGGGTCATCTGCCCAGGAAGGCGGTTGGCAGGAGGTCAGGACATCCTTaGGATGCACCGAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: SFPDLLGVGHLPRKAVGRRSGHP*DAPKSE
Trigger: CTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCT...CCTGCCAACCGCCTTCCTGGGCAGATGACCCACTCCAAGTAGATCTGGAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp CAGAGAAGGCCCAGGCAGACACCCACGATGATGCCCGTGACGGCGTaGACATCCAAGGAGTCTGAGAATGTCTTTTGCAGAGTAATCACA +
Preference number: 5 (lower is better)
Translates to: QRRPRQTPTMMPVTA*TSKESENVFCRVIT
Trigger: TGTGATTACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTGCACGCCGTCACGGGCATCATCGTGGGTGTCTGCCTGGGCCTTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp GTCGGAGTGGACAATGACCTCAGCTTCCACCTGATTCCTGCAGGCTaGGGACGGCTTCTTTCTCCCGTTGCTCTTTATGGCGTCATATAC +
Preference number: 5 (lower is better)
Translates to: VGVDNDLSFHLIPAG*GRLLSPVALYGVIY
Trigger: GTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGTVSPS*LHVTLV
Trigger: GACCAGGGTGACATGGAGCAAGGATGGAGACACTGT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGGTCAGGACATCCTTaGGATGCACCGAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGRSGHP*DAPKSE
Trigger: CTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTCCAGGGACTCCATCTTaGCCCTCACCTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGPGTPS*PSPSIL
Trigger: CAGAATTGAAGGTGAGGGCAAAGATGGAGTCCCTGG...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGCCGTCCTCGTGTTTGTaGAAAGCTACGAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWPSSCL*KATSFT
Trigger: GGTGAAGCTCGTAGCTTTCAACAAACACGAGGACGG...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGGTGCGGGCTCCCATCTaGAAGAAATACCGAGTGTCA +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWVRAPI*KKYRVS
Trigger: TGACACTCGGTATTTCTTCAAGATGGGAGCCCGCAC...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp GACACCCACGATGATGCCCGTGACGGCGTGCACATCCAAGGAGTCTaGGAATGTCTTTTGCAGAGTAATCACATCCTGCAAGCGGGAAAA +
Preference number: 5 (lower is better)
Translates to: DTHDDARDGVHIQGV*ECLLQSNHILQAGK
Trigger: TTTTCCCGCTTGCAGGATGTGATTACTCTGCAAAAGACATTCTCAGACTCCTTGGATGTGCACGCCGTCACGGGCATCATCGTGGGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 90 bp GGGTTCCAGGTCCCGAACCTGCAGCTCTGTGGTGTCATTGTTTACTaGAAACTGGTACTCCACATTGTCCACTCCCCTTGCCTTTTGGTA +
Preference number: 5 (lower is better)
Translates to: GFQVPNLQLCGVIVY*KLVLHIVHSPCLLV
Trigger: TACCAAAAGGCAAGGGGAGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGACCGCAAACTCGTACTaGGTAAATGGTTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWTANSY*VNGFRP
Trigger: CGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 90 bp GCGCCAGTGCCAGCTGAAATCCGGACTCGGTACACTTTGTTTGGCTaGAGTGAGTTTAACGTAAGTTGTGTCTCATTTCCAGGCACCTCG +
Preference number: 5 (lower is better)
Translates to: APVPAEIRTRYTLFG*SEFNVSCVSFPGTS
Trigger: CGAGGTGCCTGGAAATGAGACACAACTTACGTTAAACTCACTTCAGCCAAACAAAGTGTACCGAGTCCGGATTTCAGCTGGCACTGGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAATCTGGAGGACGCCATaGGGAAGAGTGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: AKTSLTASWRKLFATLKPIWRTP*GRVMSR
Trigger: CCGGCTCATCACTCTTCCCAATGGCGTCCTCCAGAT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTGGCTTCTTTCTCCCGTaGCTCTTTATGGCGTCATAT +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGGFFLP*LFMASY
Trigger: ATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCC...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTGGCCCACTGGTTGTaGGTTGGCACCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLAHWL*VGTLPA
Trigger: AGCTGGGAGGGTGCCAACCAACAACCAGTGGGCCAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACTGGCCCACTGGTTGTaGGTTGGCACCCTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: KYQSGLALCGKMILGFSVLAHWL*VGTLPA
Trigger: AGCTGGGAGGGTGCCAACCAACAACCAGTGGGCCAG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp ACTCATAATCCGTGTTGGGTTCCAGGTCCCGAACCTGCAGCTCTGTaGTGTCATTGTTTACTGCAAACTGGTACTCCACATTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: THNPCWVPGPEPAAL*CHCLLQTGTPHCPL
Trigger: GAGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACCCAACACGGATTATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAAGGGCCCAGGATCACTaGCAGGGGTCCCTCATCACA +
Preference number: 5 (lower is better)
Translates to: KYQSGLALCGKMILGFSVRAQDH*QGSLIT
Trigger: TGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAAGCCACAGGGAGCCATaGGGTAGCAGGTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSESHREP*GSRCRF
Trigger: GAACCTGCACCTGCTACCCAATGGCTCCCTGTGGCT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTACCTTGACGCGCCCATaGGGTCGCAACGGGATCCCG +
Preference number: 5 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSTLTRP*GRNGIP
Trigger: CGGGATCCCGTTGCGACCCAATGGGCGCGTCAAGGT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGTTCAGGGCTCCAGGGTAGCTCTGTGGTGTCATaGTTTACTGCAAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: ASWRKLFATLKPGSGLQGSSVVS*FTANWY
Trigger: GTACCAGTTTGCAGTAAACAATGACACCACAGAGCT...ACCCTGGAGCCCTGAACCTGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAACTGATGTCCGAGGGGTaGGGGCTGGACAAGGTAAGC +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSELMSEG*GLDKVS
Trigger: GCTTACCTTGTCCAGCCCCAACCCCTCGGACATCAG...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAAGTTCTCCCCAACCCCAGCCAAAGGACCCTAAGAGGCTCCAAGGACTTATGGAAACCGTACTCTATCTaGTACTTCAGCACCTGTCCA +
Preference number: 5 (lower is better)
Translates to: KVLPNPSQRTLRGSKDLWKPYSI*YFSTCP
Trigger: TGGACAGGTGCTGAAGTACAAGATAGAGTACGGTTT...CCATAAGTCCTTGGAGCCTCTTAGGGTCCTTTGGCTGGGGTTGGGGAGAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGGAACATGGCTCTGGTaGTGCACACCAGGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: FVDTALETLSECNKRLGDGTWLW*CTPGVL
Trigger: CAGGACACCTGGTGTGCACAACCAGAGCCATGTTCC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATGGCGCCTTCTCCGTCTaGCCCTTCCACACAGCAGCG +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNGAFSV*PFHTAA
Trigger: CGCTGCTGTGTGGAAGGGCAAGACGGAGAAGGCGCC...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCATGGAAGTGGAGCTGTTaGACTCTGCGTGGACATGGG +
Preference number: 5 (lower is better)
Translates to: AKTSLTASWRKLFATLKPWKWSC*TLRGHG
Trigger: CCCATGTCCACGCAGAGTCAAACAGCTCCACTTCCA...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACAGGAGATCTTTCTCTaGGAGTGGCCCCGGCAATCT +
Preference number: 5 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKQEIFL*EWPRQS
Trigger: AGATTGCCGGGGCCACTCCAAGAGAAAGATCTCCTG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: FVDTALETLSECNKRLGDVIYQG*QQQCLP
Trigger: GGGCAGACACTGCTGCTGCAAGCCCTGGTATATGAC...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCTCTGGCTCCAGGTCTaGGAGGTGGAGGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGLWLQV*EVEVRT
Trigger: TGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 90 bp CATATCCACTCCGTGGGACTGTACCGCAAACTCGTACTTGGTAAATaGTTTCAGGCCGCCAATGAGAATGTCTTCTCCAGAGCTGGTATA +
Preference number: 5 (lower is better)
Translates to: HIHSVGLYRKLVLGK*FQAANENVFSRAGI
Trigger: TATACCAGCTCTGGAGAAGACATTCTCATTGGCGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGAGTGGATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGGAACATGGCTCTGGTaGTGCACACCAGGTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSEGTWLW*CTPGVL
Trigger: CAGGACACCTGGTGTGCACAACCAGAGCCATGTTCC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACCTGCTGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAACCAGGGACTCCATCTTaGCCCTCACCTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: TCCYKVTKLTLPSYSEPKPGTPS*PSPSIL
Trigger: CAGAATTGAAGGTGAGGGCAAAGATGGAGTCCCTGG...TTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCCCACTGGTTGTTGGTaGGCACCCTCCCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNPTGCW*APSQLP
Trigger: AGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGGG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAGGGCCCAGGATCACTaGCAGGGGTCCCTCATCACA +
Preference number: 5 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSRAQDH*QGSLIT
Trigger: TGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTC +
Preference number: 5 (lower is better)
Translates to: KYQSGLALCGKMILGFSVTVSPS*LHVTLV
Trigger: GACCAGGGTGACATGGAGCAAGGATGGAGACACTGT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACCCGTCCTCGTGTTTGTaGAAAGCTACGAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: FVDTALETLSECNKRLGDPSSCL*KATSFT
Trigger: GGTGAAGCTCGTAGCTTTCAACAAACACGAGGACGG...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCTGGAAGTGGAGCTGTTaGACTCTGCGTGGACATGGG +
Preference number: 5 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGWKWSC*TLRGHG
Trigger: CCCATGTCCACGCAGAGTCAAACAGCTCCACTTCCA...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYVIYQG*QQQCLP
Trigger: GGGCAGACACTGCTGCTGCAAGCCCTGGTATATGAC...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATCTCTGGCTCCAGGTCTaGGAGGTGGAGGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNLWLQV*EVEVRT
Trigger: TGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAG...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTCTCTGGCCCACTGGTaGTTGGTTGGCACCCTCCCA +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNSLAHW*LVGTLP
Trigger: TGGGAGGGTGCCAACCAACAACCAGTGGGCCAGAGA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTATCTGGAGGACGCCATaGGGAAGAGTGATGAGCCGG +
Preference number: 5 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSIWRTP*GRVMSR
Trigger: CCGGCTCATCACTCTTCCCAATGGCGTCCTCCAGAT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TTTGTAGACACAGCACTGGAGACACTCTCAGAGTGTAATAAAAGGCTAGGTGACAGAGAAGCCAATGATTaGCTCGCTGTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: FVDTALETLSECNKRLGDREAND*LAVQLR
Trigger: CCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCT...GTCACCTAGCCTTTTATTACACTCTGAGAGTGTCTCCAGTGCTGTGTCTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp ACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTTCTGGCCCAGGGACTCCATCTTaGCCCTCACCTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: TLPSYSEPKSYIMLVSSGPGTPS*PSPSIL
Trigger: CAGAATTGAAGGTGAGGGCAAAGATGGAGTCCCTGG...GCCAGAACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTACCGTCCTCGTGTTTGTaGAAAGCTACGAGCTTCACC +
Preference number: 5 (lower is better)
Translates to: KYQSGLALCGKMILGFSVPSSCL*KATSFT
Trigger: GGTGAAGCTCGTAGCTTTCAACAAACACGAGGACGG...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGTGCGGGCTCCCATCTaGAAGAAATACCGAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSEVRAPI*KKYRVS
Trigger: TGACACTCGGTATTTCTTCAAGATGGGAGCCCGCAC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAGGCTTCTTTCTCCCGTaGCTCTTTATGGCGTCATAT +
Preference number: 5 (lower is better)
Translates to: AKTSLTASWRKLFATLKPGFFLP*LFMASY
Trigger: ATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCC...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCCCACTGGTTGTTGGTaGGCACCCTCCCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: VMLREKKFLNETPKNLRHPTGCW*APSQLP
Trigger: AGGGAGCTGGGAGGGTGCCAACCAACAACCAGTGGG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTAGAGGACACAGGGCTTaGGGCTGGCAGCTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSRGHRA*GWQLFP
Trigger: TGGGAAAAGCTGCCAGCCCAAAGCCCTGTGTCCTCT...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATAGCCACAGGGAGCCATaGGGTAGCAGGTGCAGGTTC +
Preference number: 5 (lower is better)
Translates to: VMLREKKFLNETPKNLRHSHREP*GSRCRF
Trigger: GAACCTGCACCTGCTACCCAATGGCTCCCTGTGGCT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGCCAAAACCGTACTCTATCTaGTACTTCAGCACCTGTCCA +
Preference number: 5 (lower is better)
Translates to: AKTSLTASWRKLFATLKPKPYSI*YFSTCP
Trigger: TGGACAGGTGCTGAAGTACAAGATAGAGTACGGTTT...TGGCTTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATTGGAAGTGGAGCTGTTaGACTCTGCGTGGACATGGG +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNWKWSC*TLRGHG
Trigger: CCCATGTCCACGCAGAGTCAAACAGCTCCACTTCCA...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAATACCAGTCAGGCTTGGCCCTTTGTGGTAAGATGATTTTGGGATTCAGTGTAACCGCAAACTCGTACTaGGTAAATGGTTTCAGGCCG +
Preference number: 5 (lower is better)
Translates to: KYQSGLALCGKMILGFSVTANSY*VNGFRP
Trigger: CGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGT...TACACTGAATCCCAAAATCATCTTACCACAAAGGGCCAAGCCTGACTGGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp AAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATATAATGCTAGTGAGTCAGGAGATCTTTCTCTaGGAGTGGCCCCGGCAATCT +
Preference number: 5 (lower is better)
Translates to: KLTLPSYSEPKSYIMLVSQEIFL*EWPRQS
Trigger: AGATTGCCGGGGCCACTCCAAGAGAAAGATCTCCTG...ACTCACTAGCATTATATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATCTCTGGCTCCAGGTCTaGGAGGTGGAGGTCAGGACA +
Preference number: 5 (lower is better)
Translates to: VMLREKKFLNETPKNLRHLWLQV*EVEVRT
Trigger: TGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAG...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATTCTCTGGCCCACTGGTaGTTGGTTGGCACCCTCCCA +
Preference number: 5 (lower is better)
Translates to: VMLREKKFLNETPKNLRHSLAHW*LVGTLP
Trigger: TGGGAGGGTGCCAACCAACAACCAGTGGGCCAGAGA...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAGAGAAGCCAATGATTaGCTCGCTGTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYREAND*LAVQLR
Trigger: CCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAGGCTTCTTTCTCCCGTaGCTCTTTATGGCGTCATAT +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSEGFFLP*LFMASY
Trigger: ATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCC...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CGTGGCCACTTTGAATGCTATAGAAGTAGTTCAAGTGACAATCCTGTCTTTAATAGAGAAGCCAATGATTaGCTCGCTGTGCAACTCAGG +
Preference number: 5 (lower is better)
Translates to: RGHFECYRSSSSDNPVFNREAND*LAVQLR
Trigger: CCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCT...ATTAAAGACAGGATTGTCACTTGAACTACTTCTATAGCATTCAAAGTGGCCACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAAGCTCTGTGGTGTCATaGTTTACTGCAAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSESSVVS*FTANWY
Trigger: GTACCAGTTTGCAGTAAACAATGACACCACAGAGCT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp CTATGCAAAGACTTCCCTTACAGCATCTTGGAGGAAACTCTTTGCTACTCTGAAAAACCGTACTCTATCTaGTACTTCAGCACCTGTCCA +
Preference number: 5 (lower is better)
Translates to: LCKDFPYSILEETLCYSEKPYSI*YFSTCP
Trigger: TGGACAGGTGCTGAAGTACAAGATAGAGTACGGTTT...TTCAGAGTAGCAAAGAGTTTCCTCCAAGATGCTGTAAGGGAAGTCTTTGCATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp GTCATGCTTCGAGAAAAGAAATTCTTAAATGAGACTCCAAAGAACTTAAGGCATAGGTCAGGACATCCTTaGGATGCACCGAAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: VMLREKKFLNETPKNLRHRSGHP*DAPKSE
Trigger: CTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCT...ATGCCTTAAGTTCTTTGGAGTCTCATTTAAGAATTTCTTTTCTCGAAGCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS-3UTR CAA 90 bp TGCTACAAAGTCACAAAGCTAACACTCCCCAGTTACTCAGAACCCAAATCATATAGCTCTGTGGTGTCATaGTTTACTGCAAACTGGTAC +
Preference number: 5 (lower is better)
Translates to: CYKVTKLTLPSYSEPKSYSSVVS*FTANWY
Trigger: GTACCAGTTTGCAGTAAACAATGACACCACAGAGCT...ATATGATTTGGGTTCTGAGTAACTGGGGAGTGTTAGCTTTGTGACTTTGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CGGGATCCCGTCGTGCAGCCAGTGCAGCGCGGGCCGTaGCTCCCCGGACGCCCGGCACACGAAGCGCGCGGT +
Preference number: 6 (lower is better)
Translates to: RDPVVQPVQRGP*LPGRPAHEARG
Trigger: ACCGCGCGCTTCGTGTGCCGGGCGTCCGGGGAGCCACGGCCCGCGCTGCACTGGCTGCACGACGGGATCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CCACCAGCACAGAGGAGCTGCTCAGCGGCGTGGCTGTaGCCCGAGTCGGGGCGCTGGGCAGCCCCTCGCGCA +
Preference number: 6 (lower is better)
Translates to: PPAQRSCSAAWL*PESGRWAAPRA
Trigger: TGCGCGAGGGGCTGCCCAGCGCCCCGACTCGGGTCACAGCCACGCCGCTGAGCAGCTCCTCTGTGCTGGTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CGTCCGCGAGAGCGCCTCGGGCGCCTGCGAGATGGCTaGGGCAGCAAGCACTCGGAGCTCAGCAGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: RPRERLGRLRDG*GSKHSELSSRS
Trigger: ACTGCGGCTGCTGAGCTCCGAGTGCTTGCTGCCCCAGCCATCTCGCAGGCGCCCGAGGCGCTCTCGCGGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GCGTGGACATGGGCAGGAGGCAGCGGTGGCCCCCTCTaGATAGGCAGGTCTGGCGTGGGCGCCTTCTCCGTC +
Preference number: 6 (lower is better)
Translates to: AWTWAGGSGGPL*IGRSGVGAFSV
Trigger: GACGGAGAAGGCGCCCACGCCAGACCTGCCTATCCAGAGGGGGCCACCGCTGCCTCCTGCCCATGTCCACGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp CCGCTGGAGGCAGCAGAGCACGGGTCAGAGCCGGCCTaGGACCACTACCCTGGGGCAGCTCACAGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: PLEAAEHGSEPA*DHYPGAAHSLP
Trigger: GGGCAGGCTGTGAGCTGCCCCAGGGTAGTGGTCCAAGGCCGGCTCTGACCCGTGCTCTGCTGCCTCCAGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp GTGATGACCAAGCTGCCGCCACCGCCCTGCACCTTGACGCGCCCATaGGGTCGCAACGGGATCCCGTCGTGCAGCCAGTGCAGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: VMTKLPPPPCTLTRP*GRNGIPSCSQCSAG
Trigger: GCCCGCGCTGCACTGGCTGCACGACGGGATCCCGTTGCGACCCAATGGGCGCGTCAAGGTGCAGGGCGGTGGCGGCAGCTTGGTCATCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS GCA 72 bp AGCTGGGGTGCTGCGCTGGGGACATCGTCCAGTGTATaGACCAGGGCTGGGCTGGAGGTTCGGCTGGCCCCC +
Preference number: 6 (lower is better)
Translates to: SWGAALGTSSSV*TRAGLEVRLAP
Trigger: GGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACACTGGACGATGTCCCCAGCGCAGCACCCCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CTGGGGCAGCAAGCACTCGGAGCTCAGCAGCCGCAGTaGCGAAATCACGCGTGCGGGGCTTGTTGGCTCGGC +
Preference number: 6 (lower is better)
Translates to: LGQQALGAQQPQ*RNHACGACWLG
Trigger: GCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTGCTGAGCTCCGAGTGCTTGCTGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CAAGCTGCCGCCACCGCCCTGCACCTTGACGCGCATTaGGTCGCAACGGGATCCCGTCGTGCAGCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: QAAATALHLDAH*VATGSRRAASA
Trigger: TGCACTGGCTGCACGACGGGATCCCGTTGCGACCCAATGCGCGTCAAGGTGCAGGGCGGTGGCGGCAGCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS GCA 72 bp GGGCGCAGCGGCACAGGCAGTTCCCGCGCTGTTTTCTaGTACGCACTGGTAGTAGCCAGCGTCCTGAAGGCC +
Preference number: 6 (lower is better)
Translates to: GRSGTGSSRAVF*YALVVASVLKA
Trigger: GGCCTTCAGGACGCTGGCTACTACCAGTGCGTAGCAGAAAACAGCGCGGGAACTGCCTGTGCCGCTGCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GGTCCCTCATCACAGCTCAGCTTGACAGTTGTCTCCTaGGGCAATGGCAGCTCCCCGCGCGCGGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: GPSSQLSLTVVS*GNGSSPRADSR
Trigger: CCTGCTGTCCGCGCGCGGGGAGCTGCCATTGCCCCAGGAGACAACTGTCAAGCTGAGCTGTGATGAGGGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 72 bp CCAGTGTATGCACCAGGGCTGGGCTGGAGGTTCGGCTaGCCCCCAGCTGGGAGTAGGCCACCACGTAGAACT +
Preference number: 6 (lower is better)
Translates to: PVYAPGLGWRFG*PPAGSRPPRRT
Trigger: AGTTCTACGTGGTGGCCTACTCCCAGCTGGGGGCCAGCCGAACCTCCAGCCCAGCCCTGGTGCATACACTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp GCTGTAGCCCCCAAAGTGCAGTCCAGCACCACAGCCTaGTCAGGGCCCAGGATCACTTGCAGGGGTCCCTCA +
Preference number: 6 (lower is better)
Translates to: AVAPKVQSSTTA*SGPRITCRGPS
Trigger: TGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGACTGCACTTTGGGGGCTACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 72 bp CTCGGAGCTCAGCAGCCGCAGTGGCGAAATCACGCGTaGGGGGCTTGTTGGCTCGGCAGACATAGACTCCAG +
Preference number: 6 (lower is better)
Translates to: LGAQQPQWRNHA*GACWLGRHRLQ
Trigger: CTGGAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTGCTGAGCTCCGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CAGCCGCAGTGGCGAAATCACGCGTGCGGGGCTTGTTaGCTCGGCAGACATAGACTCCAGAGTGCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: QPQWRNHACGAC*LGRHRLQSAEA
Trigger: AGCCTCGGCACTCTGGAGTCTATGTCTGCCGAGCCAACAAGCCCCGCACGCGTGATTTCGCCACTGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp CCCGCTGGAGGCAGGTTCTCATGCTCTAGTACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTCGGAGGCCCAGCAGCTGTAGCCCCC +
Preference number: 6 (lower is better)
Translates to: PAGGRFSCSSTVSPS*LHVTLVGGPAAVAP
Trigger: GGGGGCTACAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGCCTCCAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS TCA 72 bp AGCTCTTGTGTAGAGCGCTGGGTTTCCTGGGGTGCCTaGGGAGGACAATCCGGGCAGGGCTTCCCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: SSCVERWVSWGA*GGQSGQGFPVG
Trigger: TCCCACAGGGAAGCCCTGCCCGGATTGTCCTCCTCAGGCACCCCAGGAAACCCAGCGCTCTACACAAGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp GGGGGCTGGAAGGCCCTTGGTGTGGCATTCAAAGCGTaGTGTCCCGTTCTCCTCCACAATCTGGGACTCGGG +
Preference number: 6 (lower is better)
Translates to: GGWKALGVAFKA*CPVLLHNLGLG
Trigger: CCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp GTGGTGTTCTCTGGGGCTGCCACAATGACCACATCCTaGCCCCTGGTAGCCTCCAAAGACCCTCTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: VVFSGAATMTTS*PLVASKDPLRA
Trigger: GGCCCTCAGAGGGTCTTTGGAGGCTACCAGGGGGCAGGATGTGGTCATTGTGGCAGCCCCAGAGAACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp ATCACAGCTCAGCTTGACAGTTGTCTCCTGGGGCAATaGCAGCTCCCCGCGCGCGGACAGCAGGCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: ITAQLDSCLLGQ*QLPARGQQAEG
Trigger: ACCTTCTGCCTGCTGTCCGCGCGCGGGGAGCTGCCATTGCCCCAGGAGACAACTGTCAAGCTGAGCTGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 72 bp AAAGACCCTCTGAGGGCCACAGTGAGCGAGGCCTCCTaGCTGAATCGTTGGCGGGCTGAATTGGTGGCCACG +
Preference number: 6 (lower is better)
Translates to: KDPLRATVSEAS*LNRWRAELVAT
Trigger: CGTGGCCACCAATTCAGCCCGCCAACGATTCAGCCAGGAGGCCTCGCTCACTGTGGCCCTCAGAGGGTCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GGTCAGAAGGAGGTGTTGAAGGCCGGTCAGGCAGGGTaGAGCGTTCTACGACGGAGCCAAAGGGCCCATCCA +
Preference number: 6 (lower is better)
Translates to: GQKEVLKAGQAG*SVLRRSQRAHP
Trigger: TGGATGGGCCCTTTGGCTCCGTCGTAGAACGCTCCACCCTGCCTGACCGGCCTTCAACACCTCCTTCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CGGGGTGCAGAGAGAAGTCTTCGAGTGTGGCAAGCTTaGCCACAGCAACCTGGCTGGCCACCACTCCTAGCG +
Preference number: 6 (lower is better)
Translates to: RGAERSLRVWQA*PQQPGWPPLLA
Trigger: CGCTAGGAGTGGTGGCCAGCCAGGTTGCTGTGGTCAAGCTTGCCACACTCGAAGACTTCTCTCTGCACCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp CTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTTaGAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LPLLFMASYTRA*SSSVCPVPAGG
Trigger: GCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 72 bp AAGTCTTCGAGTGTGGCAAGCTTGACCACAGCAACCTaGCTGGCCACCACTCCTAGCGGGCTGTGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: KSSSVASLTTAT*LATTPSGLWAR
Trigger: TCTGGCCCACAGCCCGCTAGGAGTGGTGGCCAGCCAGGTTGCTGTGGTCAAGCTTGCCACACTCGAAGACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GATCCTCACCCTGTCGGACCCAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGCACTCCATCACTACAC +
Preference number: 6 (lower is better)
Translates to: DPHPVGPRTQKG*GQQRPRTPSLH
Trigger: GTGTAGTGATGGAGTGCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCTGGGTCCGACAGGGTGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS CAA 72 bp GTCCAGCACCACAGCCTGCTCAGGGCCCAGGATCACTaGCAGGGGTCCCTCATCACAGCTCAGCTTGACAGT +
Preference number: 6 (lower is better)
Translates to: VQHHSLLRAQDH*QGSLITAQLDS
Trigger: ACTGTCAAGCTGAGCTGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 72 bp CCAGAGTGCCGAGGCTGCGCGCTGGCGATGAGTAGATaGGTCCGGCCCAGAACGATGACATCCGTGGAGATA +
Preference number: 6 (lower is better)
Translates to: PECRGCALAMSR*VRPRTMTSVEI
Trigger: TATCTCCACGGATGTCATCGTTCTGGGCCGGACCAATCTACTCATCGCCAGCGCGCAGCCTCGGCACTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp GGTAGCAGGTGCAGGTTCTCATGCTCTAGTACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTCGGAGGCCCAGCAGCTGTAGCCCCC +
Preference number: 6 (lower is better)
Translates to: GSRCRFSCSSTVSPS*LHVTLVGGPAAVAP
Trigger: GGGGGCTACAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGCACCTGCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp GAGCCTGCATCACTGTCCTGGACATCTAGGATCTGGAGGACGCCATaGGGAAGAGTGATGAGCCGGGACTCCTCAGGCACGGTCACCTGG +
Preference number: 6 (lower is better)
Translates to: EPASLSWTSRIWRTP*GRVMSRDSSGTVTW
Trigger: CCAGGTGACCGTGCCTGAGGAGTCCCGGCTCATCACTCTTCCCAATGGCGTCCTCCAGATCCTAGATGTCCAGGACAGTGATGCAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp CGGCTTCTTTCTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGGCAGCAGAGC +
Preference number: 6 (lower is better)
Translates to: RLLSPVALYGVIYQG*QQQCLPGSRWRQQS
Trigger: GCTCTGCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CCGAAGTCGGAGTGGACAATGACCTCAGCTTCCACCTaGTTCCTGCAGGCTGGGGACGGCTTCTTTCTCCCG +
Preference number: 6 (lower is better)
Translates to: PKSEWTMTSAST*FLQAGDGFFLP
Trigger: CGGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGTCATTGTCCACTCCGACTTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 72 bp TCCAGCACCACAGCCTGCTCAGGGCCCAGGATCACTTaGAGGGGTCCCTCATCACAGCTCAGCTTGACAGTT +
Preference number: 6 (lower is better)
Translates to: SSTTACSGPRIT*RGPSSQLSLTV
Trigger: AACTGTCAAGCTGAGCTGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 72 bp ATGGCGTCATATACCAGGGCTTGCAGCAGCAGTGTCTaGCCGGTTCCCGCTGGAGGCAGGTTCTCATGCTCT +
Preference number: 6 (lower is better)
Translates to: MASYTRACSSSV*PVPAGGRFSCS
Trigger: AGAGCATGAGAACCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CCA 72 bp GCTTTCCATCCTGTCGGACCCAGGACACAAAAGGGGTaGGGTCAGCAGAGGCCACGCACTCCATCACTACAC +
Preference number: 6 (lower is better)
Translates to: AFHPVGPRTQKG*GQQRPRTPSLH
Trigger: GTGTAGTGATGGAGTGCGTGGCCTCTGCTGACCCCACCCCTTTTGTGTCCTGGGTCCGACAGGATGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035499.5
ENSMUST00000213533.2
CDS CCA 72 bp AGCTCCAGACGTGGAAGGCAGAGTCTCTGCAGTCAGTaGTTCCTCTGGCTCCAGGTCTTGGAGGTGGAGGTC +
Preference number: 6 (lower is better)
Translates to: SSRRGRQSLCSQ*FLWLQVLEVEV
Trigger: GACCTCCACCTCCAAGACCTGGAGCCAGAGGAACCACTGACTGCAGAGACTCTGCCTTCCACGTCTGGAGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 72 bp TCTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: SPVALYGVIYQG*QQQCLPGSRWR
Trigger: CCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 90 bp CAAAGTGCAGTCCAGCACCACAGCCTGCTCAGGGCCCAGGATCACTaGCAGGGGTCCCTCATCACAGCTCAGCTTGACAGTTGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: QSAVQHHSLLRAQDH*QGSLITAQLDSCLL
Trigger: CAGGAGACAACTGTCAAGCTGAGCTGTGATGAGGGACCCCTGCAAGTGATCCTGGGCCCTGAGCAGGCTGTGGTGCTGGACTGCACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 90 bp CGGCTTCTTTCTCCCGTTGCTCTTTATGGCGTCATATACCAGGGCTaGCAGCAGCAGTGTCTGCCCGGTTCCCGCTGGAGGCAGGTTCTC +
Preference number: 6 (lower is better)
Translates to: RLLSPVALYGVIYQG*QQQCLPGSRWRQVL
Trigger: GAGAACCTGCCTCCAGCGGGAACCGGGCAGACACTGCTGCTGCAAGCCCTGGTATATGACGCCATAAAGAGCAACGGGAGAAAGAAGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CAA 90 bp GGTTCCTCTGGCTCCAGGTCTTGGAGGTGGAGGTCAGGACATCCTTaGGATGCACCGAAGTCGGAGTGGACAATGACCTCAGCTTCCACC +
Preference number: 6 (lower is better)
Translates to: GSSGSRSWRWRSGHP*DAPKSEWTMTSAST
Trigger: GGTGGAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAGGAACC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 90 bp GGAAGGCAGAGTCTCTGCAGTCAGTGGTTCCTCTGGCTCCAGGTCTaGGAGGTGGAGGTCAGGACATCCTTTGGATGCACCGAAGTCGGA +
Preference number: 6 (lower is better)
Translates to: GRQSLCSQWFLWLQV*EVEVRTSFGCTEVG
Trigger: TCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAGGAACCACTGACTGCAGAGACTCTGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 72 bp GCAGGTTCTCATGCTCTAGTACAGTGTCTCCATCCTTaGTCCATGTCACCCTGGTCGGAGGCCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: AGSHALVQCLHP*SMSPWSEAQQL
Trigger: CAGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS GCA 72 bp GCTGTCCCGTTCTCCTCCACAATCTGGGACTCGGGGTaGAGAGAGAAGTCTTCGAGTGTGGCAAGCTTGACC +
Preference number: 6 (lower is better)
Translates to: AVPFSSTIWDSG*REKSSSVASLT
Trigger: GGTCAAGCTTGCCACACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp AGAGTGATGAGCCGGGACTCCTCAGGCACGGTCACCTaGTCCTTTTCCCAAGTAATGATGGGGGCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RVMSRDSSGTVT*SFSQVMMGAGR
Trigger: CCTTCCAGCCCCCATCATTACTTGGGAAAAGGACCAGGTGACCGTGCCTGAGGAGTCCCGGCTCATCACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp TTGTCTTCCACATCTGAGGGTGGTGGGGACCAATCCTaGGGACGAGGATGCACGAGGGACTCCAACTCATGG +
Preference number: 6 (lower is better)
Translates to: LSSTSEGGGDQS*GRGCTRDSNSW
Trigger: CCATGAGTTGGAGTCCCTCGTGCATCCTCGTCCCCAGGATTGGTCCCCACCACCCTCAGATGTGGAAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CTTGGGCTGACTGTTAGAGGACACAGGGCTTTGGGCTaGCAGCTTTTCCCAGGGGCCTCCTCTATAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LGLTVRGHRALG*QLFPGASSIAV
Trigger: CACTGCTATAGAGGAGGCCCCTGGGAAAAGCTGCCAGCCCAAAGCCCTGTGTCCTCTAACAGTCAGCCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 72 bp GCTTCTTCCACCGAAGCCAAATGGAAGTGGAGCTGTTaGACTCTGCGTGGACATGGGCAGGAGGCAGCGGTG +
Preference number: 6 (lower is better)
Translates to: ASSTEAKWKWSC*TLRGHGQEAAV
Trigger: CACCGCTGCCTCCTGCCCATGTCCACGCAGAGTCAAACAGCTCCACTTCCATTTGGCTTCGGTGGAAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp GGCAGGTTCTCATGCTCTAGTACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTCGGAGGCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: GRFSCSSTVSPS*LHVTLVGGPAA
Trigger: AGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CAA 90 bp GTCCACTCCCCTTGCCTTTTGGTAGTGAAGAGAGAAGCCAATGATTaGCTCGCTGTGCAACTCAGGCCGCTCCCAGGCCACCAGCACAGA +
Preference number: 6 (lower is better)
Translates to: VHSPCLLVVKREAND*LAVQLRPLPGHQHR
Trigger: TCTGTGCTGGTGGCCTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTCACTACCAAAAGGCAAGGGGAGTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CCTTCCACACAGCAGCGTAGCCGTCCTCGTGTTTGTTaGAAGCTACGAGCTTCACCTCGTACAGCCTGCCAG +
Preference number: 6 (lower is better)
Translates to: PSTQQRSRPRVC*KLRASPRTACQ
Trigger: CTGGCAGGCTGTACGAGGTGAAGCTCGTAGCTTTCAACAAACACGAGGACGGCTACGCTGCTGTGTGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp TACAGCCTGCCAGGGACTAACTGGGTCAGTTCATACTaGTTCACTTTCTTCTTCAGCCGCACGGGCCCGACG +
Preference number: 6 (lower is better)
Translates to: YSLPGTNWVSSY*FTFFFSRTGPT
Trigger: CGTCGGGCCCGTGCGGCTGAAGAAGAAAGTGAAGCAGTATGAACTGACCCAGTTAGTCCCTGGCAGGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp CCCAGGCAGACACCCACGATGATGCCCGTGACGGCGTaGACATCCAAGGAGTCTGAGAATGTCTTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: PRQTPTMMPVTA*TSKESENVFCR
Trigger: TCTGCAAAAGACATTCTCAGACTCCTTGGATGTGCACGCCGTCACGGGCATCATCGTGGGTGTCTGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp AGTGTCTGCCCGGTTCCCGCTGGAGGCAGGTTCTCATaGTCTAGTACAGTGTCTCCATCCTTGCTCCATGTC +
Preference number: 6 (lower is better)
Translates to: SVCPVPAGGRFS*SSTVSPSLLHV
Trigger: GACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGCCTCCAGCGGGAACCGGGCAGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166273.2
CDS CCA 72 bp TCCCAAGTAATGATGGGGGCTGGAAGGCCCTTGGTGTaGCATTCAAAGCGTGCTGTCCCGTTCTCCTCCACA +
Preference number: 6 (lower is better)
Translates to: SQVMMGAGRPLV*HSKRAVPFSST
Trigger: TGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCCATCATTACTTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp TGCAGGTTCTCATGCTCTAGTACAGTGTCTCCATCCTaGCTCCATGTCACCCTGGTCGGAGGCCCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: CRFSCSSTVSPS*LHVTLVGGPAA
Trigger: AGCTGCTGGGCCTCCGACCAGGGTGACATGGAGCAAGGATGGAGACACTGTACTAGAGCATGAGAACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp GGCTCCAGGTCTTGGAGGTGGAGGTCAGGACATCCTTaGGATGCACCGAAGTCGGAGTGGACAATGACCTCA +
Preference number: 6 (lower is better)
Translates to: GSRSWRWRSGHP*DAPKSEWTMTS
Trigger: TGAGGTCATTGTCCACTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 72 bp AGTCTCTGCAGTCAGTGGTTCCTCTGGCTCCAGGTCTaGGAGGTGGAGGTCAGGACATCCTTTGGATGCACC +
Preference number: 6 (lower is better)
Translates to: SLCSQWFLWLQV*EVEVRTSFGCT
Trigger: GGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTGGAGCCAGAGGAACCACTGACTGCAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 90 bp GTCACCTGGTCCTTTTCCCAAGTAATGATGGGGGCTGGAAGGCCCTaGGTGTGGCATTCAAAGCGTGCTGTCCCGTTCTCCTCCACAATC +
Preference number: 6 (lower is better)
Translates to: VTWSFSQVMMGAGRP*VWHSKRAVPFSSTI
Trigger: GATTGTGGAGGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCCATCATTACTTGGGAAAAGGACCAGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp CGGCAATCTGAAACACTGCCACCCATAAGGCTGTGTACTTCAGCCTaGTCTTCCACATCTGAGGGTGGTGGGGACCAATCCTGGGGACGA +
Preference number: 6 (lower is better)
Translates to: RQSETLPPIRLCTSA*SSTSEGGGDQSWGR
Trigger: TCGTCCCCAGGATTGGTCCCCACCACCCTCAGATGTGGAAGACAAGGCTGAAGTACACAGCCTTATGGGTGGCAGTGTTTCAGATTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CTCCCCTTGCCTTTTGGTAGTGAAGAGAGAAGCCAATaGTTTGCTCGCTGTGCAACTCAGGCCGCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: LPLPFGSEERSQ*FARCATQAAPR
Trigger: CCTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTCACTACCAAAAGGCAAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CTGAGAAGGGACTCCATAGCCAGCGCCAGTGCCAGCTaGAATCCGGACTCGGTACACTTTGTTTGGCTGAAG +
Preference number: 6 (lower is better)
Translates to: LRRDSIASASAS*NPDSVHFVWLK
Trigger: CTTCAGCCAAACAAAGTGTACCGAGTCCGGATTTCAGCTGGCACTGGCGCTGGCTATGGAGTCCCTTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp GCATCCACTGAGAAGGGACTCCATAGCCAGCGCCAGTaGCAGCTGAAATCCGGACTCGGTACACTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: ASTEKGLHSQRQ*QLKSGLGTLCL
Trigger: CAAACAAAGTGTACCGAGTCCGGATTTCAGCTGGCACTGGCGCTGGCTATGGAGTCCCTTCTCAGTGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp CACCAGGGACTCCATCTTTGCCCTCACCTTCAATTCTaGAGGGGCAAAGGGAACATGGCTCTGGTTGTGCAC +
Preference number: 6 (lower is better)
Translates to: HQGLHLCPHLQF*RGKGNMALVVH
Trigger: GTGCACAACCAGAGCCATGTTCCCTTTGCCCCTGCAGAATTGAAGGTGAGGGCAAAGATGGAGTCCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp CAGGTCTTGGAGGTGGAGGTCAGGACATCCTTTGGATaGACCGAAGTCGGAGTGGACAATGACCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: QVLEVEVRTSFG*TEVGVDNDLSF
Trigger: GAAGCTGAGGTCATTGTCCACTCCGACTTCGGTGCATCCAAAGGATGTCCTGACCTCCACCTCCAAGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 72 bp CATTCAAAGCGTGCTGTCCCGTTCTCCTCCACAATCTaGGACTCGGGGTGCAGAGAGAAGTCTTCGAGTGTG +
Preference number: 6 (lower is better)
Translates to: HSKRAVPFSSTI*DSGCREKSSSV
Trigger: CACACTCGAAGACTTCTCTCTGCACCCCGAGTCCCAGATTGTGGAGGAGAACGGGACAGCACGCTTTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GACAATGACCTCAGCTTCCACCTGATTCCTGCAGGCTaGGGACGGCTTCTTTCTCCCGTTGCTCTTTATGGC +
Preference number: 6 (lower is better)
Translates to: DNDLSFHLIPAG*GRLLSPVALYG
Trigger: GCCATAAAGAGCAACGGGAGAAAGAAGCCGTCCCCAGCCTGCAGGAATCAGGTGGAAGCTGAGGTCATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CCA 72 bp AGTCTGCTCCTTGAGACAGATCCACAGCTCCAGACGTaGAAGGCAGAGTCTCTGCAGTCAGTGGTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: SLLLETDPQLQT*KAESLQSVVPL
Trigger: CAGAGGAACCACTGACTGCAGAGACTCTGCCTTCCACGTCTGGAGCTGTGGATCTGTCTCAAGGAGCAGACT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000166273.2
ENSMUST00000213533.2
CDS CAA 72 bp TCCTTTTCCCAAGTAATGATGGGGGCTGGAAGGCCCTaGGTGTGGCATTCAAAGCGTGCTGTCCCGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFSQVMMGAGRP*VWHSKRAVPFS
Trigger: GGAGAACGGGACAGCACGCTTTGAATGCCACACCAAGGGCCTTCCAGCCCCCATCATTACTTGGGAAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp CCTTGCCTTTTGGTAGTGAAGAGAGAAGCCAATGATTaGCTCGCTGTGCAACTCAGGCCGCTCCCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: PCLLVVKREAND*LAVQLRPLPGH
Trigger: GTGGCCTGGGAGCGGCCTGAGTTGCACAGCGAGCAAATCATTGGCTTCTCTCTTCACTACCAAAAGGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp TCCGTGTTGGGTTCCAGGTCCCGAACCTGCAGCTCTGTGGTGTCATaGTTTACTGCAAACTGGTACTCCACATTGTCCACTCCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: SVLGSRSRTCSSVVS*FTANWYSTLSTPLA
Trigger: GGCAAGGGGAGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACCCAACACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp ACGACGGAGCCAAAGGGCCCATCCATATCCACTCCGTaGGACTGTACCGCAAACTCGTACTTGGTAAATGGT +
Preference number: 6 (lower is better)
Translates to: TTEPKGPSISTP*DCTANSYLVNG
Trigger: ACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGAGTGGATATGGATGGGCCCTTTGGCTCCGTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp GAATTAGATACTCCACAATCTCACCATTGGGCTCCGTaGGGGGACACCAGTGTAACCGAACGGTGGATGGTG +
Preference number: 6 (lower is better)
Translates to: ELDTPQSHHWAP*GDTSVTERWMV
Trigger: CACCATCCACCGTTCGGTTACACTGGTGTCCCCCCACGGAGCCCAATGGTGAGATTGTGGAGTATCTAATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp GTCCCGAACCTGCAGCTCTGTGGTGTCATTGTTTACTaGAAACTGGTACTCCACATTGTCCACTCCCCTTGC +
Preference number: 6 (lower is better)
Translates to: VPNLQLCGVIVY*KLVLHIVHSPC
Trigger: GCAAGGGGAGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp CCGTGTTGGGTTCCAGGTCCCGAACCTGCAGCTCTGTaGTGTCATTGTTTACTGCAAACTGGTACTCCACAT +
Preference number: 6 (lower is better)
Translates to: PCWVPGPEPAAL*CHCLLQTGTPH
Trigger: ATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACCCAACACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 90 bp GGCCCATCCATATCCACTCCGTGGGACTGTACCGCAAACTCGTACTaGGTAAATGGTTTCAGGCCGCCAATGAGAATGTCTTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: GPSISTPWDCTANSY*VNGFRPPMRMSSPE
Trigger: CTCTGGAGAAGACATTCTCATTGGCGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGAGTGGATATGGATGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS GCA 72 bp TCCAACTACGAGGTTCCCACTACATCCCTGCAAAGCTaGATCACAGCCGCTGGTTTGAATCCCTTCCTTCTT +
Preference number: 6 (lower is better)
Translates to: SNYEVPTTSLQS*ITAAGLNPFLL
Trigger: AAGAAGGAAGGGATTCAAACCAGCGGCTGTGATGCAGCTTTGCAGGGATGTAGTGGGAACCTCGTAGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS CCA 72 bp TCCCACTACATCCCTGCAAAGCTGCATCACAGCCGCTaGTTTGAATCCCTTCCTTCTTACTCTGATCCTCAC +
Preference number: 6 (lower is better)
Translates to: SHYIPAKLHHSR*FESLPSYSDPH
Trigger: GTGAGGATCAGAGTAAGAAGGAAGGGATTCAAACCAGCGGCTGTGATGCAGCTTTGCAGGGATGTAGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS CAA 72 bp GGTTCCAGGTCCCGAACCTGCAGCTCTGTGGTGTCATaGTTTACTGCAAACTGGTACTCCACATTGTCCACT +
Preference number: 6 (lower is better)
Translates to: GSRSRTCSSVVS*FTANWYSTLST
Trigger: AGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGTTCGGGACCTGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp ACTACATCCCTGCAAAGCTGCATCACAGCCGCTGGTTaGAATCCCTTCCTTCTTACTCTGATCCTCACCCTG +
Preference number: 6 (lower is better)
Translates to: TTSLQSCITAAG*NPFLLTLILTL
Trigger: CAGGGTGAGGATCAGAGTAAGAAGGAAGGGATTCAAACCAGCGGCTGTGATGCAGCTTTGCAGGGATGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000077696.13
CDS GCA 72 bp GCAGTGTCCACTGGTGTTCGGGCTGGGTGTGGTTGTTaGTGTAGAGAATTAGATACTCCACAATCTCACCAT +
Preference number: 6 (lower is better)
Translates to: AVSTGVRAGCGC*CRELDTPQSHH
Trigger: ATGGTGAGATTGTGGAGTATCTAATTCTCTACAGCAACAACCACACCCAGCCCGAACACCAGTGGACACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp ACCTGCAGCTCTGTGGTGTCATTGTTTACTGCAAACTaGTACTCCACATTGTCCACTCCCCTTGCCTTTTGG +
Preference number: 6 (lower is better)
Translates to: TCSSVVSLFTAN*YSTLSTPLAFW
Trigger: CCAAAAGGCAAGGGGAGTGGACAATGTGGAGTACCAGTTTGCAGTAAACAATGACACCACAGAGCTGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp TCCGTGGGACTGTACCGCAAACTCGTACTTGGTAAATaGTTTCAGGCCGCCAATGAGAATGTCTTCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SVGLYRKLVLGK*FQAANENVFSR
Trigger: TCTGGAGAAGACATTCTCATTGGCGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CAA 72 bp ATATCCACTCCGTGGGACTGTACCGCAAACTCGTACTaGGTAAATGGTTTCAGGCCGCCAATGAGAATGTCT +
Preference number: 6 (lower is better)
Translates to: ISTPWDCTANSY*VNGFRPPMRMS
Trigger: AGACATTCTCATTGGCGGCCTGAAACCATTTACCAAGTACGAGTTTGCGGTACAGTCCCACGGAGTGGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS CCA 72 bp TACAGTGTAGTTGACAATCTTGACAGTGGTAAAGTCTaGCTTCTTCCACCGAAGCCAAATGGAAGTGGAGCT +
Preference number: 6 (lower is better)
Translates to: YSVVDNLDSGKV*LLPPKPNGSGA
Trigger: AGCTCCACTTCCATTTGGCTTCGGTGGAAGAAGCCAGACTTTACCACTGTCAAGATTGTCAACTACACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2
CDS TCA 72 bp CCAGCTGAAATCCGGACTCGGTACACTTTGTTTGGCTaGAGTGAGTTTAACGTAAGTTGTGTCTCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PAEIRTRYTLFG*SEFNVSCVSFP
Trigger: TGGAAATGAGACACAACTTACGTTAAACTCACTTCAGCCAAACAAAGTGTACCGAGTCCGGATTTCAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035499.5
ENSMUST00000077696.13
ENSMUST00000213533.2