RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for IGDCC3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032394

Ensembl transcript IDs: ENSMUST00000034961.6, ENSMUST00000217371.2

Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTTGGTGAGGGGACATTaGCTCGAGCAGGGAGATGCC +
Preference number: 2 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPLVRGH*LEQGDA
Trigger: GGCATCTCCCTGCTCGAGCCAATGTCCCCTCACCAA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR GCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCGCTCGAGCAGGGAGATaGCTTGCTTGTAGGACCCAC +
Preference number: 2 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAARAGR*LACRTH
Trigger: GTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGC...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTAGCTTGTAGGACCCACTaGTTCCTGTGGTTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLACRTH*FLWFEN
Trigger: GTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGC...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTACCCACTGGTTCCTGTaGTTTGAGAACCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGTHWFL*FENPVL
Trigger: AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR TCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGCTCAAAATCCATCCTaGGAAAACAAGGTCCGAGCA +
Preference number: 2 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEAQNPS*ENKVRA
Trigger: TGCTCGGACCTTGTTTTCTCAGGATGGATTTTGAGC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGACCCACTGGTTCCTGTaGTTTGAGAACCCTGTCCTT +
Preference number: 2 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAETHWFL*FENPVL
Trigger: AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGT...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR GCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGGCTCGAGCAGGGAGATaGCTTGCTTGTAGGACCCAC +
Preference number: 2 (lower is better)
Translates to: VGAESHNSSKSILRKQGPARAGR*LACRTH
Trigger: GTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGC...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR TCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGCTGGTTCCTGTGGTTTaGGAACCCTGTCCTTCACTG +
Preference number: 2 (lower is better)
Translates to: VGAESHNSSKSILRKQGPLVPVV*EPCPSL
Trigger: CAGTGAAGGACAGGGTTCTCAAACCACAGGAACCAG...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR TCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAACTGGTTCCTGTGGTTTaGGAACCCTGTCCTTCACTG +
Preference number: 2 (lower is better)
Translates to: AEVGAESHNSSKSILRKQLVPVV*EPCPSL
Trigger: CAGTGAAGGACAGGGTTCTCAAACCACAGGAACCAG...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCTTGTAGGACCCACTaGTTCCTGTGGTTTGAGAAC +
Preference number: 2 (lower is better)
Translates to: AEVGAESHNSSKSILRKQACRTH*FLWFEN
Trigger: GTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCAGGGACATATTTTTaGAGTATAATTCACTTCTTC +
Preference number: 2 (lower is better)
Translates to: AEVGAESHNSSKSILRKQAGTYF*SIIHFF
Trigger: GAAGAAGTGAATTATACTCCAAAAATATGTCCCTGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CAA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTATATGGGCAGCAGGCATaGGTGAGGGGACATTGGCTC +
Preference number: 3 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLYGQQA*VRGHWL
Trigger: GAGCCAATGTCCCCTCACCAATGCCTGCTGCCCATA...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR-3UTR CAA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGTATGGGCAGCAGGCATaGGTGAGGGGACATTGGCTC +
Preference number: 3 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEYGQQA*VRGHWL
Trigger: GAGCCAATGTCCCCTCACCAATGCCTGCTGCCCATA...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR CCA 72 bp GGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTaGTTTGAGAACCCTGTCCTTCACTGGCGAGCGCCA +
Preference number: 3 (lower is better)
Translates to: GRCLACRTHWFL*FENPVLHWRAP
Trigger: TGGCGCTCGCCAGTGAAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR CCA 72 bp AAGTCCTATGGGCAGCAGGCATTGGTGAGGGGACATTaGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCC +
Preference number: 3 (lower is better)
Translates to: KSYGQQALVRGH*LEQGDALLVGP
Trigger: GGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGTCCCCTCACCAATGCCTGCTGCCCATAGGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR GCA 72 bp GGCATTGGTGAGGGGACATTGGCTCGAGCAGGGAGATaGCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTT +
Preference number: 3 (lower is better)
Translates to: GIGEGTLARAGR*LACRTHWFLWF
Trigger: AAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGTCCCCTCACCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR CCA 72 bp GCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTaGTTCCTGTGGTTTGAGAACCCTGTCCTTCACTGG +
Preference number: 3 (lower is better)
Translates to: ARAGRCLACRTH*FLWFENPVLHW
Trigger: CCAGTGAAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
3UTR CCA 72 bp CACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTCACTaGCGAGCGCCAAATCCCACAGAACAGGAAAAACCT +
Preference number: 3 (lower is better)
Translates to: HWFLWFENPVLH*RAPNPTEQEKP
Trigger: AGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGTGAAGGACAGGGTTCTCAAACCACAGGAACCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCGGCGCGGGTTGCCCGTaGCGACACACTCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAGAGCP*RHTPAP
Trigger: CGGTGCTGGAGTGTGTCGCCACGGGCAACCCGCGCC...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTAGGCGCGGGTTGCCCGTaGCGACACACTCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLGAGCP*RHTPAP
Trigger: CGGTGCTGGAGTGTGTCGCCACGGGCAACCCGCGCC...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCACAGCACGGTCAGCCTaGCGCTGGCTTGCGACGAGC +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPTARSA*RWLATS
Trigger: GCTCGTCGCAAGCCAGCGCCAGGCTGACCGTGCTGT...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGACAGGCCCAGGCCCTaGACAGGGGGACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGDRPRP*TGGRGL
Trigger: GAGGCCACGTCCCCCTGTGCAGGGCCTGGGCCTGTC...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCGGGTGCTGGCCAGGGTaGGGACAGAGGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPGCWPG*GQRLNW
Trigger: CCAGTTTAGCCTCTGTCCCCACCCTGGCCAGCACCC...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTCATCTCGGCTCAGCTaGCCCCCTTCTCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPSSRLS*PPSPRL
Trigger: GAGCCGAGGAGAAGGGGGCCAGCTGAGCCGAGATGA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCACCCTCCTCACCCGTaGCGGCCTGGGGGTGTACGT +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGHPPHP*RPGGVR
Trigger: ACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACAATGGGGCGCGGGTTaGCCGTGGCGACACACTCCA +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLQWGAG*PWRHTP
Trigger: TGGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTG...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTAGGCGGTGGCTCCCCCTaGGCTTGGCAGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLGGGSP*AWQVNM
Trigger: CATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCC...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTGCAGCCCAGCACTATaGGCTGCCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPCSPAL*AAQGWQ
Trigger: TTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCAATGGGGCGCGGGTTaGCCGTGGCGACACACTCCA +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGQWGAG*PWRHTP
Trigger: TGGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCCTATATCCTGGGGTaGTGGGACAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGAYILG*WDRPRP
Trigger: GGGCCTGGGCCTGTCCCAGCACCCCAGGATATAGGC...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCGGCTTGGGAAGCCCATaGATTTGGCACTGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPGLGSP*IWHWKR
Trigger: CCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCC...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCCAGGCCCCACAAGAATaGTGGGCTCCTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPQAPQE*WAPCRS
Trigger: GGACCTACAAGGAGCCCACCATTCTTGTGGGGCCTG...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGCGGTCAGCCTGGCGCTaGCTTGCGACGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAERSAWR*LATSQQ
Trigger: TTGCTGGCTCGTCGCAAGCCAGCGCCAGGCTGACCG...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCGGACAGAGGCTAAACTaGCCCCTCGTGGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPGQRLN*PLVVCR
Trigger: CCTACACACCACGAGGGGCCAGTTTAGCCTCTGTCC...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTAAAGCCTCCATTGTGTTaGGCCAGCCGTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLKPPLC*ASRGQG
Trigger: GCCCTGGCCACGGCTGGCCCAACACAATGGAGGCTT...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCTCATCTCGGCTCAGCTaGCCCCCTTCTCCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRASSRLS*PPSPRL
Trigger: GAGCCGAGGAGAAGGGGGCCAGCTGAGCCGAGATGA...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGCACCCTCCTCACCCGTaGCGGCCTGGGGGTGTACGT +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWHPPHP*RPGGVR
Trigger: ACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTG...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTATTCAACCATGTGACATaGGGCGGTGGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLFNHVT*GGGSPC
Trigger: GCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAA...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCTCCAGCACCGCAGTCTaGTGCACTGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRASSTAV*CTVRVR
Trigger: CCTCACCCTGACAGTGCACCAGACTGCGGTGCTGGA...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTGCCCTCCACCCCAATaGGGCGGCCATCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWCPPPQ*GGHPSG
Trigger: GCCGCTTGGATGGCCGCCCCATTGGGGTGGAGGGCA...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGGCTCCCCCTGCGCTTaGCAGGTGAACATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGGSPCA*QVNMAV
Trigger: CACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCC...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGGTGCACTGTCAGGGTaGGGTTCTCAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEGALSG*GSQAPQ
Trigger: TTGTGGGGCCTGAGAACCTCACCCTGACAGTGCACC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTTTCAACCATGTGACATaGGGCGGTGGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGFNHVT*GGGSPC
Trigger: GCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAA...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTCTCTCACCAGGTGCTaGAAGGTGCTCTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPSLTRC*KVLLLT
Trigger: TGTCAGCAAGAGCACCTTTCAGCACCTGGTGAGAGA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTCCCTGCCACAAGGTTaGAGCCTTGAAGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPSLPQG*SLEAEP
Trigger: TGGTTCAGCTTCAAGGCTTCAACCTTGTGGCAGGGA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGCCAGTTCAGCAGAATaGCCCAGACCCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEASSAE*PRPRLG
Trigger: GCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTCCAGCCTGAAGTGGTaGATCAGCAAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPSSLKW*ISKEPL
Trigger: CAATGGCTCCTTGCTGATCCACCACTTCAGGCTGGA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCCATGGATTTGGCACTaGAAGCGGGCCACACCACCC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGPWIWH*KRATPP
Trigger: GGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGGTGAGCCTGGCCCCGTaGCTGACCCGCACACTAGCA +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWVSLAP*LTRTLA
Trigger: TGCTAGTGTGCGGGTCAGCCACGGGGCCAGGCTCAC...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGTCCAGCACCGCAGTCTaGTGCACTGTCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAESSTAV*CTVRVR
Trigger: CCTCACCCTGACAGTGCACCAGACTGCGGTGCTGGA...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGTGGTCCCAGCAGGCCTaGAGATGGACTGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEWSQQA*RWTGDA
Trigger: AGCATCCCCAGTCCATCTCCAGGCCTGCTGGGACCA...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCCATTCTTCAACCATGTaGCATGAGGCGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAHSSTM*HEAVAP
Trigger: GGGAGCCACCGCCTCATGTCACATGGTTGAAGAATG...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCGAAAGGTGCTCTTGCTaGCAGCTTCCTGGTACTCTA +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPERCSC*QLPGTL
Trigger: TAGAGTACCAGGAAGCTGTCAGCAAGAGCACCTTTC...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGCTTGCACTGGAGGGGTaGCCTCCACTTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAELALEG*PPLCSP
Trigger: TGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAG...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGTTCCTCCAGGAGACTTaGACTGGAGGGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAEFLQET*TGGVPS
Trigger: GGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAA...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTAGCACCGCAGTCTGGTaGACTGTCAGGGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGSTAVW*TVRVRF
Trigger: GAACCTCACCCTGACAGTGCACCAGACTGCGGTGCT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCCTGACATGGCCTCCTaGCCCCAGCACTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGPDMAS*PQHLSI
Trigger: AATGGACAAGTGCTGGGGGCAGGAGGCCATGTCAGG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGGAAGCCCATGGATTTaGCACTGGAAGCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEGSPWI*HWKRAT
Trigger: TGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCAGGCCCCACAAGAATaGTGGGCTCCTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGQAPQE*WAPCRS
Trigger: GGACCTACAAGGAGCCCACCATTCTTGTGGGGCCTG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACAGCAGGCCTGGAGATaGACTGGGGATGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLQQAWR*TGDAEQ
Trigger: TTGTTCAGCATCCCCAGTCCATCTCCAGGCCTGCTG...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCCACACTAGCAATGTTTaGGGCCACACAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPHTSNV*GHTVED
Trigger: ATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTG...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCATGGACTGGGGATGCTaGACAAACTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAMDWGC*TNSAGA
Trigger: AGCTCCAGCAGAGTTTGTTCAGCATCCCCAGTCCAT...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCAGTCGGCAGCCTTCCTaGTGTGCAAGACATAGCCAA +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRASRQPS*CARHSQ
Trigger: TTGGCTATGTCTTGCACATCAGGAAGGCTGCCGACT...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTAGGCGGTAAAACAGCTTaGAGCCTCCATTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLGGKTA*SLHCVG
Trigger: CCCAACACAATGGAGGCTTCAAGCTGTTTTACCGCC...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCCGAAGTCCTGTTATCTaGAGGACTCCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRARSPVI*RTPLGS
Trigger: ACTGCCCAAGGGAGTCCTGCAGATAACAGGACTTCG...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTTACACAGGAGGACCCTaGCCCTCTGGCCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGYTGGP*PSGQTE
Trigger: TTCTGTTTGGCCAGAGGGGCAGGGTCCTCCTGTGTA...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GGTAGGAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACTCTGTTGTCCTCCCTaGCACAAGGTTGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: GRSAFGLCGVEAEATAPLLCCPP*HKVEAL
Trigger: CAAGGCTTCAACCTTGTGGCAGGGAGGACAACAGAG...TAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGCCCAGACCCAGGCTTaGCGCAGGCAGCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLAQTQA*RRQRQQ
Trigger: CTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTGCAGCCCAGCACTATaGGCTGCCCAGGGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWCSPAL*AAQGWQ
Trigger: TTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCA...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTTGCCCTCCACCCCAATaGGGCGGCCATCCAAGCGGC +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLCPPPQ*GGHPSG
Trigger: GCCGCTTGGATGGCCGCCCCATTGGGGTGGAGGGCA...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCCTGAACAAACTCTGCTaGAGCTTGTACCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRALNKLC*SLYHQP
Trigger: CGGCTGGTGGTACAAGCTCCAGCAGAGTTTGTTCAG...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCAGAAGCTGTAGGCAGTaGAGGGCTCAAGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRARSCRQ*RAQGLS
Trigger: TGAGAGACCTTGAGCCCTCCACTGCCTACAGCTTCT...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGGGACAGAGGCTAAACTaGCCCCTCGTGGTGTGTAGG +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAEGQRLN*PLVVCR
Trigger: CCTACACACCACGAGGGGCCAGTTTAGCCTCTGTCC...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCGCTGTTCCAACTCCTTaGCGTCCACCGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAAVPTP*RPPAFH
Trigger: ATGAAAAGCCGGTGGACGCCAAGGAGTTGGAACAGC...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTATGGACTGGGGATGCTaGACAAACTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGMDWGC*TNSAGA
Trigger: AGCTCCAGCAGAGTTTGTTCAGCATCCCCAGTCCAT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGTCCCTGCCACAAGGTTaGAGCCTTGAAGCTGAACCA +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAESLPQG*SLEAEP
Trigger: TGGTTCAGCTTCAAGGCTTCAACCTTGTGGCAGGGA...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTTGGACGTATGGTTGGTaGCATCTTCCTTCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGWTYGW*HLPSGS
Trigger: ACTGCCGGAAGGAAGATGTCACCAACCATACGTCCA...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTTGCCCAGCACCTGGATaGCCTCCACCCCAATGGGGC +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLCPAPG*PPPQWG
Trigger: GCCCCATTGGGGTGGAGGGCATCCAGGTGCTGGGCA...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCGGCGGTGGCTCCCCCTaGGCTTGGCAGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRGGGSP*AWQVNM
Trigger: CATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCC...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGTCCAGCCTGAAGTGGTaGATCAGCAAGGAGCCATTG +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAESSLKW*ISKEPL
Trigger: CAATGGCTCCTTGCTGATCCACCACTTCAGGCTGGA...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCGTGAGCCTGGCCCCGTaGCTGACCCGCACACTAGCA +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRVSLAP*LTRTLA
Trigger: TGCTAGTGTGCGGGTCAGCCACGGGGCCAGGCTCAC...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGACCTGTGCCCAGCACCTaGATGCCCTCCACCCCAATG +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRPVPST*MPSTPM
Trigger: CATTGGGGTGGAGGGCATCCAGGTGCTGGGCACAGG...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAGGCTCCCCCTGCGCTTaGCAGGTGAACATGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRGSPCA*QVNMAV
Trigger: CACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCC...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTATGATCTCTTTGGTGTaGGCCAGAGGCTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGMISLV*ARGSLQ
Trigger: CTGGAGTGAGCCTCTGGCCCACACCAAAGAGATCAT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAAAGCCTCCATTGTGTTaGGCCAGCCGTGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRKPPLC*ASRGQG
Trigger: GCCCTGGCCACGGCTGGCCCAACACAATGGAGGCTT...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGAGGACCCTGCCCCTCTaGCCAAACAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAERTLPL*PNRRKR
Trigger: CCTCTTTCTTCTGTTTGGCCAGAGGGGCAGGGTCCT...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGCTGTTCCAACTCCTTaGCGTCCACCGGCTTTTCAT +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEAVPTP*RPPAFH
Trigger: ATGAAAAGCCGGTGGACGCCAAGGAGTTGGAACAGC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCAGCTGACCCAGCTGTaGGAAACAGCTGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGQLTQL*ETAVPT
Trigger: AGTTGGAACAGCTGTTTCCCACAGCTGGGTCAGCTG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTGACGAGCCTTCCGACTaGCCAGCAGCCCAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLDEPSD*PAAQSG
Trigger: ACCGCTTTGGGCTGCTGGTCAGTCGGAAGGCTCGTC...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCGACGAGCCTTCCGACTaGCCAGCAGCCCAAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRDEPSD*PAAQSG
Trigger: ACCGCTTTGGGCTGCTGGTCAGTCGGAAGGCTCGTC...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGAGTCGGCAGCCTTCCTaGTGTGCAAGACATAGCCAA +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAESRQPS*CARHSQ
Trigger: TTGGCTATGTCTTGCACATCAGGAAGGCTGCCGACT...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGACAGGCCCAGGCCCTaGACAGGGGGACGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQDRPRP*TGGRGL
Trigger: GAGGCCACGTCCCCCTGTGCAGGGCCTGGGCCTGTC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGGGCTCCAGGACACAATaGGGCGCGGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPGSRTQ*GAGCPW
Trigger: CCACGGGCAACCCGCGCCCCATTGTGTCCTGGAGCC...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGCCACACATTGGTAGATaGCCTCATCTTCAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEPHIGR*PHLQVR
Trigger: TCGGACCTGAAGATGAGGCCATCTACCAATGTGTGG...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGAGAAGCTGTAGGCAGTaGAGGGCTCAAGGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAERSCRQ*RAQGLS
Trigger: TGAGAGACCTTGAGCCCTCCACTGCCTACAGCTTCT...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGCTTGAAGCTGAACCATaGAGAGCTGGGTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAELEAEP*RAGSPH
Trigger: GTGAGGAGACCCAGCTCTCCATGGTTCAGCTTCAAG...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAGCGACTGCTGGAGGCTaGGTCTGTCCTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRATAGG*VCPSLR
Trigger: CCTCAGTGAAGGACAGACCCAGCCTCCAGCAGTCGC...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCGGTGCACTGTCAGGGTaGGGTTCTCAGGCCCCACAA +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRGALSG*GSQAPQ
Trigger: TTGTGGGGCCTGAGAACCTCACCCTGACAGTGCACC...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGGTGGTGTGTAGGCTTTaGTGTAGAAGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAEVVCRL*CRSCRQ
Trigger: CTGCCTACAGCTTCTACATCAAAGCCTACACACCAC...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCTTGCACTGGAGGGGTaGCCTCCACTTTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLLALEG*PPLCSP
Trigger: TGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTTTCCTCCAGGAGACTTaGACTGGAGGGGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLFLQET*TGGVPS
Trigger: GGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAA...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGTGCCCAGCACCTGGATaGCCTCCACCCCAATGGGGC +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPCPAPG*PPPQWG
Trigger: GCCCCATTGGGGTGGAGGGCATCCAGGTGCTGGGCA...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCGTCCGACTCCAGAAATaGTCAGTGTGCTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAVRLQK*SVCCYC
Trigger: ACAATAACAGCACACTGAGCATTTCTGGAGTCGGAC...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGGTTGTAGAGAGGAGCTaGCCAGCAACCGCACAGATA +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWVVERS*PATAQI
Trigger: TATCTGTGCGGTTGCTGGGCAGCTCCTCTCTACAAC...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGGCCTATATCCTGGGGTaGTGGGACAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPAYILG*WDRPRP
Trigger: GGGCCTGGGCCTGTCCCAGCACCCCAGGATATAGGC...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCCCAGACCCAGGCTTaGCGCAGGCAGCGGCAACAG +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQAQTQA*RRQRQQ
Trigger: CTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGGCCACACAGTaGAAGATGCCGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWFEATQ*KMPLSS
Trigger: TGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAA...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGCTCCAGGACACAATaGGGCGCGGGTTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQGSRTQ*GAGCPW
Trigger: CCACGGGCAACCCGCGCCCCATTGTGTCCTGGAGCC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGCTGAACAAACTCTGCTaGAGCTTGTACCACCAGCCG +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWLNKLC*SLYHQP
Trigger: CGGCTGGTGGTACAAGCTCCAGCAGAGTTTGTTCAG...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGCTTGAAGCTGAACCATaGAGAGCTGGGTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: TLARAGRCLACRTHWFLWLEAEP*RAGSPH
Trigger: GTGAGGAGACCCAGCTCTCCATGGTTCAGCTTCAAG...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCACAGGGCCTATATCCTaGGGTGCTGGGACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRTGPIS*GAGTGP
Trigger: TGGGCCTGTCCCAGCACCCCAGGATATAGGCCCTGT...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGCGACTGCTGGAGGCTaGGTCTGTCCTTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLATAGG*VCPSLR
Trigger: CCTCAGTGAAGGACAGACCCAGCCTCCAGCAGTCGC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCTTCCGGCAGTCACATaGGGGAGTCAGGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLLPAVT*GSQGCP
Trigger: AGGACAGCCCTGACTCCCCCATGTGACTGCCGGAAG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
3UTR CAA 72 bp TTGGTGAGGGGACATTGGCTCGAGCAGGGAGATGCCTaGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LVRGHWLEQGDA*LVGPTGSCGLR
Trigger: TCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGTCCCCTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGCACACTAGCAATGTTTaGGGCCACACAGTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAEHTSNV*GHTVED
Trigger: ATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTG...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGCTGGACAGTCACATCTaGGATGATAAGGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: VEAEATAPLPPRTFIPAELDSHI*DDKVSC
Trigger: ACAGGAAACCTTATCATCTCAGATGTGACTGTCCAG...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCCACACAGTGGAAGATaGCGCTGTCCTCAGCCCGAA +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLPHSGR*RCPQPE
Trigger: TTCGGGCTGAGGACAGCGGCATCTTCCACTGTGTGG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCCTGACATGGCCTCCTaGCCCCAGCACTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLPDMAS*PQHLSI
Trigger: AATGGACAAGTGCTGGGGGCAGGAGGCCATGTCAGG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGCCCCACAAGAATGGTaGGCTCCTTGTAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLAPQEW*APCRSL
Trigger: CAGGGACCTACAAGGAGCCCACCATTCTTGTGGGGC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTTTCTTGAGCCTGACATaGCCTCCTGCCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLFLSLT*PPAPST
Trigger: AGTGCTGGGGGCAGGAGGCCATGTCAGGCTCAAGAA...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAACGGTCAGCCTGGCGCTaGCTTGCGACGAGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQRSAWR*LATSQQ
Trigger: TTGCTGGCTCGTCGCAAGCCAGCGCCAGGCTGACCG...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGATCTCTCACCAGGTGCTaGAAGGTGCTCTTGCTGACA +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRSLTRC*KVLLLT
Trigger: TGTCAGCAAGAGCACCTTTCAGCACCTGGTGAGAGA...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGGTCCGACTCCAGAAATaGTCAGTGTGCTGTTATTGT +
Preference number: 4 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAEVRLQK*SVCCYC
Trigger: ACAATAACAGCACACTGAGCATTTCTGGAGTCGGAC...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAGTTGTAGAGAGGAGCTaGCCAGCAACCGCACAGATA +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRVVERS*PATAQI
Trigger: TATCTGTGCGGTTGCTGGGCAGCTCCTCTCTACAAC...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGCCATGGATTTGGCACTaGAAGCGGGCCACACCACCC +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPPWIWH*KRATPP
Trigger: GGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGG...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGTGGTCCCAGCAGGCCTaGAGATGGACTGGGGATGCT +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPWSQQA*RWTGDA
Trigger: AGCATCCCCAGTCCATCTCCAGGCCTGCTGGGACCA...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGACAGCACGGTCAGCCTaGCGCTGGCTTGCGACGAGC +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRTARSA*RWLATS
Trigger: GCTCGTCGCAAGCCAGCGCCAGGCTGACCGTGCTGT...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGATCTCTTTGGTGTaGGCCAGAGGCTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRMISLV*ARGSLQ
Trigger: CTGGAGTGAGCCTCTGGCCCACACCAAAGAGATCAT...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGGTGCTGGCCAGGGTaGGGACAGAGGCTAAACTGG +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQGCWPG*GQRLNW
Trigger: CCAGTTTAGCCTCTGTCCCCACCCTGGCCAGCACCC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCAGAGTGGTGTGGGTaGCCTCTGGTAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQAEWCG*PLVALL
Trigger: GAGCAGAGCTACCAGAGGGCACCCACACCACTCTGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCCGAAGTCCTGTTATCTaGAGGACTCCCTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRRSPVI*RTPLGS
Trigger: ACTGCCCAAGGGAGTCCTGCAGATAACAGGACTTCG...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGAGCACCGCAGTCTGGTaGACTGTCAGGGTGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPSTAVW*TVRVRF
Trigger: GAACCTCACCCTGACAGTGCACCAGACTGCGGTGCT...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAACATGGAGCAGGGGCTaGAGGATCCGTGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQTWSRG*RIRGCG
Trigger: TCCACACCCACGGATCCTGCAGCCCCTGCTCCATGT...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCTCTGTTGTCCTCCCTaGCACAAGGTTGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLLCCPP*HKVEAL
Trigger: CAAGGCTTCAACCTTGTGGCAGGGAGGACAACAGAG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCCAGTTCAGCAGAATaGCCCAGACCCAGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQASSAE*PRPRLG
Trigger: GCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGGGAAGCCCATGGATTTaGCACTGGAAGCGGGCCACA +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPGSPWI*HWKRAT
Trigger: TGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCC...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTTTTGAGGCCACACAGTaGAAGATGCCGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLFEATQ*KMPLSS
Trigger: TGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAA...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGCCTGTGCCCAGCACCTaGATGCCCTCCACCCCAATG +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRPVPST*MPSTPM
Trigger: CATTGGGGTGGAGGGCATCCAGGTGCTGGGCACAGG...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAACACAAATCGGACCGTaGCGTTTCCATCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRTQIGP*RFHLHA
Trigger: AGCATGGAGATGGAAACGCCACGGTCCGATTTGTGT...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTCAGCTGACCCAGCTGTaGGAAACAGCTGTTCCAACT +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLQLTQL*ETAVPT
Trigger: AGTTGGAACAGCTGTTTCCCACAGCTGGGTCAGCTG...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGTGTTCTTCTCCCATGTaGTCAGGGGCTTGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPCSSPM*SGAWEA
Trigger: GGCTTCCCAAGCCCCTGATCACATGGGAGAAGAACA...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGACATGGAGCAGGGGCTaGAGGATCCGTGGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRTWSRG*RIRGCG
Trigger: TCCACACCCACGGATCCTGCAGCCCCTGCTCCATGT...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCCATCGTCCGTGTCAATaGGAACTCTGTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRHRPCQ*ELCSSP
Trigger: GGGAGAAGAACAGAGTTCCCATTGACACGGACGATG...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTCATCGTCCGTGTCAATaGGAACTCTGTTCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLHRPCQ*ELCSSP
Trigger: GGGAGAAGAACAGAGTTCCCATTGACACGGACGATG...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTTTGCTGACAGCTTCCTaGTACTCTAGCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLLLTAS*YSSLGE
Trigger: CTCACCCAAGCTAGAGTACCAGGAAGCTGTCAGCAA...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGGAGGTTGCACTGACTaGGCGGTAAAACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLGGCTD*AVKQLE
Trigger: TTCAAGCTGTTTTACCGCCCAGTCAGTGCAACCTCC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAACATTCTTCAACCATGTaGCATGAGGCGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQHSSTM*HEAVAP
Trigger: GGGAGCCACCGCCTCATGTCACATGGTTGAAGAATG...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR GCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAATACACAGGAGGACCCTaGCCCTCTGGCCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQYTGGP*PSGQTE
Trigger: TTCTGTTTGGCCAGAGGGGCAGGGTCCTCCTGTGTA...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAACAGCAGGCCTGGAGATaGACTGGGGATGCTGAACAA +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQQQAWR*TGDAEQ
Trigger: TTGTTCAGCATCCCCAGTCCATCTCCAGGCCTGCTG...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGTTCTTGAGCCTGACATaGCCTCCTGCCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRFLSLT*PPAPST
Trigger: AGTGCTGGGGGCAGGAGGCCATGTCAGGCTCAAGAA...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAAGGACCCTGCCCCTCTaGCCAAACAGAAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQRTLPL*PNRRKR
Trigger: CCTCTTTCTTCTGTTTGGCCAGAGGGGCAGGGTCCT...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTCTGGACAGTCACATCTaGGATGATAAGGTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLLDSHI*DDKVSC
Trigger: ACAGGAAACCTTATCATCTCAGATGTGACTGTCCAG...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGGCAAGACATAGCCAATaGTCTCTTTGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPARHSQ*SLWCGP
Trigger: TGGCCCACACCAAAGAGATCATTGGCTATGTCTTGC...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGCGGTAAAACAGCTTaGAGCCTCCATTGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQGGKTA*SLHCVG
Trigger: CCCAACACAATGGAGGCTTCAAGCTGTTTTACCGCC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGCCACACATTGGTAGATaGCCTCATCTTCAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPPHIGR*PHLQVR
Trigger: TCGGACCTGAAGATGAGGCCATCTACCAATGTGTGG...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGTCCGTTGCTGACAGCTTCCTaGTACTCTAGCTTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: VGAESHNSSKSILRKQGPLLTAS*YSSLGE
Trigger: CTCACCCAAGCTAGAGTACCAGGAAGCTGTCAGCAA...CGGACCTTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGCAAGACATAGCCAATaGTCTCTTTGGTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQARHSQ*SLWCGP
Trigger: TGGCCCACACCAAAGAGATCATTGGCTATGTCTTGC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTGGCAATATCATCATTTaGCTCCACAGAAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: RCLACRTHWFLWFENPVLGNIII*LHRKCQ
Trigger: CTGGCATTTTCTGTGGAGCCAAATGATGATATTGCC...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAACACAAATCGGACCGTaGCGTTTCCATCTCCATGCT +
Preference number: 4 (lower is better)
Translates to: AEVGAESHNSSKSILRKQTQIGP*RFHLHA
Trigger: AGCATGGAGATGGAAACGCCACGGTCCGATTTGTGT...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR TCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGGTGGTGTGTAGGCTTTaGTGTAGAAGCTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRVVCRL*CRSCRQ
Trigger: CTGCCTACAGCTTCTACATCAAAGCCTACACACCAC...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CCA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGGGAGGTTGCACTGACTaGGCGGTAAAACAGCTTGAA +
Preference number: 4 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRGGCTD*AVKQLE
Trigger: TTCAAGCTGTTTTACCGCCCAGTCAGTGCAACCTCC...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp CGGGCCACACCACCCTCCTCACCCGTGACGGCCTGGGGGTGTACGTaGAAGTCGGACATAGTTGCAGCCTGGAGACGAGCCTTCCGACTG +
Preference number: 5 (lower is better)
Translates to: RATPPSSPVTAWGCT*KSDIVAAWRRAFRL
Trigger: CAGTCGGAAGGCTCGTCTCCAGGCTGCAACTATGTCCGACTTCCACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTGGTGTGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTGGCTCCCCCTGCGCTaGGCAGGTGAACATGGCTGT +
Preference number: 5 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPWLPLR*AGEHGC
Trigger: ACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCGTGACGGCCTaGGGGTGTACGTGGAAGTCGGACATAGTTGCAGCCTGGAGACGA +
Preference number: 5 (lower is better)
Translates to: WHWKRATPPSSPVTA*GCTWKSDIVAAWRR
Trigger: TCGTCTCCAGGCTGCAACTATGTCCGACTTCCACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TTCTCCCATGTGATCAGGGGCTTGGGAAGCCCATGGATTTGGCACTaGAAGCGGGCCACACCACCCTCCTCACCCGTGACGGCCTGGGGG +
Preference number: 5 (lower is better)
Translates to: FSHVIRGLGSPWIWH*KRATPPSSPVTAWG
Trigger: CCCCCAGGCCGTCACGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCACATGGGAGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp CTCCACAGAAAATGCCAGTTCAGCAGAATGGCCCAGACCCAGGCTTaGCGCAGGCAGCGGCAACAGCAGCAGCAGCAACAGCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: LHRKCQFSRMAQTQA*RRQRQQQQQQQQRR
Trigger: CCGCCGCTGCTGTTGCTGCTGCTGCTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGGAGAGCTGGGTCTCCTCACATGGAGCAGGGGCTGCAGGATCCGTaGGTGTGGAGCCTGGCTGTGCAGCTGACCCAGCTGTGGGAAACA +
Preference number: 5 (lower is better)
Translates to: WRAGSPHMEQGLQDP*VWSLAVQLTQLWET
Trigger: TGTTTCCCACAGCTGGGTCAGCTGCACAGCCAGGCTCCACACCCACGGATCCTGCAGCCCCTGCTCCATGTGAGGAGACCCAGCTCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCCTTCCTCCAGGAGACTaGCACTGGAGGGGTGCCCTC +
Preference number: 5 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRALPPGD*HWRGAL
Trigger: GAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAG...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGCTGAGACAATGGGGCGCGGGTaGCCCGTGGCGACACACTCC +
Preference number: 5 (lower is better)
Translates to: ATAPLPPRTFIPAEVGAETMGRG*PVATHS
Trigger: GGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTGT...CTCAGCACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCTGGCTCCCCCTGCGCTaGGCAGGTGAACATGGCTGT +
Preference number: 5 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAWLPLR*AGEHGC
Trigger: ACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCA...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp CACAGTGAGCCTGGCCCCGTGGCTGACCCGCACACTAGCAATGTTTaGGGCCACACAGTGGAAGATGCCGCTGTCCTCAGCCCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: HSEPGPVADPHTSNV*GHTVEDAAVLSPKS
Trigger: GGACTTCGGGCTGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTGCGGGTCAGCCACGGGGCCAGGCTCACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp CTGTTCTTCTCCCATGTGATCAGGGGCTTGGGAAGCCCATGGATTTaGCACTGGAAGCGGGCCACACCACCCTCCTCACCCGTGACGGCC +
Preference number: 5 (lower is better)
Translates to: LFFSHVIRGLGSPWI*HWKRATPPSSPVTA
Trigger: GGCCGTCACGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCACATGGGAGAAGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTGGGACGTGGCCTCTGTaGTCCTCCCTGCCACAAGGT +
Preference number: 5 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGGTWPL*SSLPQG
Trigger: ACCTTGTGGCAGGGAGGACAACAGAGGCCACGTCCC...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp AACATGGCTGTGGTCCCAGCAGGCCTGGAGATGGACTGGGGATGCTaGACAAACTCTGCTGGAGCTTGTACCACCAGCCGACCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: NMAVVPAGLEMDWGC*TNSAGACTTSRPWA
Trigger: GGCCCAGGGTCGGCTGGTGGTACAAGCTCCAGCAGAGTTTGTTCAGCATCCCCAGTCCATCTCCAGGCCTGCTGGGACCACAGCCATGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp TGGCCTCCTGCCCCCAGCACTTGTCCATTCTTCAACCATGTGACATaGGGCGGTGGCTCCCCCTGCGCTTGGCAGGTGAACATGGCTGTG +
Preference number: 5 (lower is better)
Translates to: WPPAPSTCPFFNHVT*GGGSPCAWQVNMAV
Trigger: CACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 90 bp GTAGCTCTGCTCCATTCTTCCTCCAGGAGACTTGCACTGGAGGGGTaGCCTCCACTTTGCAGCCCAGCACTATGGGCTGCCCAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: VALLHSSSRRLALEG*PPLCSPALWAAQGW
Trigger: CCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAGAATGGAGCAGAGCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 90 bp TGGGTGCCCTCTGGTAGCTCTGCTCCATTCTTCCTCCAGGAGACTTaGACTGGAGGGGTGCCCTCCACTTTGCAGCCCAGCACTATGGGC +
Preference number: 5 (lower is better)
Translates to: WVPSGSSAPFFLQET*TGGVPSTLQPSTMG
Trigger: GCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAGAATGGAGCAGAGCTACCAGAGGGCACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGCCCCCAGCACTTGTCCATTCTTCAACCATGTGACATGAGGCGGTaGCTCCCCCTGCGCTTGGCAGGTGAACATGGCTGTGGTCCCAGC +
Preference number: 5 (lower is better)
Translates to: CPQHLSILQPCDMRR*LPLRLAGEHGCGPS
Trigger: GCTGGGACCACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAGGCCCAGACCCAGGCTaGGCGCAGGCAGCGGCAACA +
Preference number: 5 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRGPDPG*AQAAAT
Trigger: TGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCC...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGGGGGTGCCCTCCACTTaGCAGCCCAGCACTATGGGC +
Preference number: 5 (lower is better)
Translates to: TLARAGRCLACRTHWFLWGVPST*QPSTMG
Trigger: GCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCC...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ATCCATCCTGAGAAAACAAGGTCCGAGCAGGGTGACAGCGTCAGGGGCCGGGCCATCAGCAAGGAGCCATaGGCCAGCAGAGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: IHPEKTRSEQGDSVRGRAISKEP*ASRVVW
Trigger: CCACACCACTCTGCTGGCCAATGGCTCCTTGCTGAT...GGCCCGGCCCCTGACGCTGTCACCCTGCTCGGACCTTGTTTTCTCAGGATGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GAGTGCTTTCGGGCTCTGTGGGGTAGAGGCGGAGGCTACTGCCCCACTACCCCCTCCTGCCCCCAGCACTaGTCCATTCTTCAACCATGT +
Preference number: 5 (lower is better)
Translates to: ECFRALWGRGGGYCPTTPSCPQH*SILQPC
Trigger: ACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGA...GGGGGTAGTGGGGCAGTAGCCTCCGCCTCTACCCCACAGAGCCCGAAAGCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TCACCCTCATCTGAAGGGCTACCTCCTTGCTCCAGCCTGAAGTGGTaGATCAGCAAGGAGCCATTGGCCAGCAGAGTGGTGTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SPSSEGLPPCSSLKW*ISKEPLASRVVWVP
Trigger: GGGCACCCACACCACTCTGCTGGCCAATGGCTCCTTGCTGATCCACCACTTCAGGCTGGAGCAAGGAGGTAGCCCTTCAGATGAGGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GGAACTCTGTTCTTCTCCCATGTGATCAGGGGCTTGGGAAGCCCATaGATTTGGCACTGGAAGCGGGCCACACCACCCTCCTCACCCGTG +
Preference number: 5 (lower is better)
Translates to: GTLFFSHVIRGLGSP*IWHWKRATPPSSPV
Trigger: CACGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCACATGGGAGAAGAACAGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GCCCCGTGGCTGACCCGCACACTAGCAATGTTTGAGGCCACACAGTaGAAGATGCCGCTGTCCTCAGCCCGAAGTCCTGTTATCTGCAGG +
Preference number: 5 (lower is better)
Translates to: APWLTRTLAMFEATQ*KMPLSSARSPVICR
Trigger: CCTGCAGATAACAGGACTTCGGGCTGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTGCGGGTCAGCCACGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGGACAGTCACATCTGAGATGATAAGGTTTCCTGTGCCCAGCACCTaGATGCCCTCCACCCCAATGGGGCGGCCATCCAAGCGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WTVTSEMIRFPVPST*MPSTPMGRPSKRLQ
Trigger: CTGGAGCCGCTTGGATGGCCGCCCCATTGGGGTGGAGGGCATCCAGGTGCTGGGCACAGGAAACCTTATCATCTCAGATGTGACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGTTCCAACTCCTTGGCGTCCACCGGCTTTTCATCTCGGCTCAGCTaGCCCCCTTCTCCTCGGCTCAGTCCATTCAGGGCCAGGATACCA +
Preference number: 5 (lower is better)
Translates to: CSNSLASTGFSSRLS*PPSPRLSPFRARIP
Trigger: TGGTATCCTGGCCCTGAATGGACTGAGCCGAGGAGAAGGGGGCCAGCTGAGCCGAGATGAAAAGCCGGTGGACGCCAAGGAGTTGGAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTATCAGCAAGGAGCCATaGGCCAGCAGAGTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGISKEP*ASRVVW
Trigger: CCACACCACTCTGCTGGCCAATGGCTCCTTGCTGAT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAACAATGGGGCGCGGGTaGCCCGTGGCGACACACTCC +
Preference number: 5 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRTMGRG*PVATHS
Trigger: GGAGTGTGTCGCCACGGGCAACCCGCGCCCCATTGT...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTAAACTCTGCTGGAGCTaGTACCACCAGCCGACCCTG +
Preference number: 5 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGKLCWS*YHQPTL
Trigger: CAGGGTCGGCTGGTGGTACAAGCTCCAGCAGAGTTT...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp CTGCACAGGGGGACGTGGCCTCTGTTGTCCTCCCTGCCACAAGGTTaGAGCCTTGAAGCTGAACCATGGAGAGCTGGGTCTCCTCACATG +
Preference number: 5 (lower is better)
Translates to: LHRGTWPLLSSLPQG*SLEAEPWRAGSPHM
Trigger: CATGTGAGGAGACCCAGCTCTCCATGGTTCAGCTTCAAGGCTTCAACCTTGTGGCAGGGAGGACAACAGAGGCCACGTCCCCCTGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGAGCTTGAAGCCTCCATaGTGTTGGGCCAGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: TLARAGRCLACRTHWFLWSLKPP*CWASRG
Trigger: GCCACGGCTGGCCCAACACAATGGAGGCTTCAAGCT...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp TGGAGGGCTCAAGGTCTCTCACCAGGTGCTGAAAGGTGCTCTTGCTaGCAGCTTCCTGGTACTCTAGCTTGGGTGAGTCGGCAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: WRAQGLSPGAERCSC*QLPGTLAWVSRQPS
Trigger: GGAAGGCTGCCGACTCACCCAAGCTAGAGTACCAGGAAGCTGTCAGCAAGAGCACCTTTCAGCACCTGGTGAGAGACCTTGAGCCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp GGGTGGGGACAGAGGCTAAACTGGCCCCTCGTGGTGTGTAGGCTTTaGTGTAGAAGCTGTAGGCAGTGGAGGGCTCAAGGTCTCTCACCA +
Preference number: 5 (lower is better)
Translates to: GWGQRLNWPLVVCRL*CRSCRQWRAQGLSP
Trigger: TGGTGAGAGACCTTGAGCCCTCCACTGCCTACAGCTTCTACATCAAAGCCTACACACCACGAGGGGCCAGTTTAGCCTCTGTCCCCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 90 bp AGTGGTGGATCAGCAAGGAGCCATTGGCCAGCAGAGTGGTGTGGGTaGCCTCTGGTAGCTCTGCTCCATTCTTCCTCCAGGAGACTTGCA +
Preference number: 5 (lower is better)
Translates to: SGGSARSHWPAEWCG*PLVALLHSSSRRLA
Trigger: TGCAAGTCTCCTGGAGGAAGAATGGAGCAGAGCTACCAGAGGGCACCCACACCACTCTGCTGGCCAATGGCTCCTTGCTGATCCACCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp CTGAAGTGGTGGATCAGCAAGGAGCCATTGGCCAGCAGAGTGGTGTaGGTGCCCTCTGGTAGCTCTGCTCCATTCTTCCTCCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: LKWWISKEPLASRVV*VPSGSSAPFFLQET
Trigger: AGTCTCCTGGAGGAAGAATGGAGCAGAGCTACCAGAGGGCACCCACACCACTCTGCTGGCCAATGGCTCCTTGCTGATCCACCACTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GGGCTGTCCTCTCAGAGGCTCCCTTCAGAGACACAAATCGGACCGTaGCGTTTCCATCTCCATGCTGGTTGTAGGCCAGGAGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: GLSSQRLPSETQIGP*RFHLHAGCRPGASP
Trigger: AGGTGAAGCTCCTGGCCTACAACCAGCATGGAGATGGAAACGCCACGGTCCGATTTGTGTCTCTGAAGGGAGCCTCTGAGAGGACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
CDS GCA 90 bp TGCACTGGAGGGGTGCCCTCCACTTTGCAGCCCAGCACTATGGGCTaGCCAGGGTTGGCAATATCATCATTTGGCTCCACAGAAAATGCC +
Preference number: 5 (lower is better)
Translates to: CTGGVPSTLQPSTMG*PGLAISSFGSTENA
Trigger: GGCATTTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 90 bp CATTCTTCCTCCAGGAGACTTGCACTGGAGGGGTGCCCTCCACTTTaGAGCCCAGCACTATGGGCTGCCCAGGGTTGGCAATATCATCAT +
Preference number: 5 (lower is better)
Translates to: HSSSRRLALEGCPPL*SPALWAAQGWQYHH
Trigger: ATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GCAATATCATCATTTGGCTCCACAGAAAATGCCAGTTCAGCAGAATaGCCCAGACCCAGGCTTGGCGCAGGCAGCGGCAACAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: AISSFGSTENASSAE*PRPRLGAGSGNSSS
Trigger: GCTGCTGCTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAGCCAAATGATGATATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp TGCCTGTCCTCTCAGAGGCTCCCTTCAGAGACACAAATCGGACCGTaGCGTTTCCATCTCCATGCTGGTTGTAGGCCAGGAGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: CLSSQRLPSETQIGP*RFHLHAGCRPGASP
Trigger: AGGTGAAGCTCCTGGCCTACAACCAGCATGGAGATGGAAACGCCACGGTCCGATTTGTGTCTCTGAAGGGAGCCTCTGAGAGGACAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034961.6
CDS-3UTR CAA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAGGCCCAGACCCAGGCTaGGCGCAGGCAGCGGCAACA +
Preference number: 5 (lower is better)
Translates to: AEVGAESHNSSKSILRKQGPDPG*AQAAAT
Trigger: TGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCC...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTGCTGTTATTGTTCTaGAGCCTGACATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEVLLLF*SLTWPP
Trigger: AGGAGGCCATGTCAGGCTCAAGAACAATAACAGCAC...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GTAGAGGCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGCACAAGGTTGAAGCCTaGAAGCTGAACCATGGAGAG +
Preference number: 5 (lower is better)
Translates to: VEAEATAPLPPRTFIPAEHKVEA*KLNHGE
Trigger: CTCTCCATGGTTCAGCTTCAAGGCTTCAACCTTGTG...CTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGCCTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCGGAGGCTACTGCCCCACTACCCCCAAGGACATTCATTCCGGCTGAGGTAGGTCACAAGGTTGAAGCCTaGAAGCTGAACCATGGAGAG +
Preference number: 5 (lower is better)
Translates to: AEATAPLPPRTFIPAEVGHKVEA*KLNHGE
Trigger: CTCTCCATGGTTCAGCTTCAAGGCTTCAACCTTGTG...ACCTACCTCAGCCGGAATGAATGTCCTTGGGGGTAGTGGGGCAGTAGCCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGGGACGTGGCCTCTGTaGTCCTCCCTGCCACAAGGT +
Preference number: 5 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLGTWPL*SSLPQG
Trigger: ACCTTGTGGCAGGGAGGACAACAGAGGCCACGTCCC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp ACCTCTCATCGTCCGTGTCAATGGGAACTCTGTTCTTCTCCCATGTaGTCAGGGGCTTGGGAAGCCCATGGATTTGGCACTGGAAGCGGG +
Preference number: 5 (lower is better)
Translates to: TSHRPCQWELCSSPM*SGAWEAHGFGTGSG
Trigger: CCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCACATGGGAGAAGAACAGAGTTCCCATTGACACGGACGATGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GCAGCCCAGCACTATGGGCTGCCCAGGGTTGGCAATATCATCATTTaGCTCCACAGAAAATGCCAGTTCAGCAGAATGGCCCAGACCCAG +
Preference number: 5 (lower is better)
Translates to: AAQHYGLPRVGNIII*LHRKCQFSRMAQTQ
Trigger: CTGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GGGTGCCCTCCACTTTGCAGCCCAGCACTATGGGCTGCCCAGGGTTaGCAATATCATCATTTGGCTCCACAGAAAATGCCAGTTCAGCAG +
Preference number: 5 (lower is better)
Translates to: GCPPLCSPALWAAQG*QYHHLAPQKMPVQQ
Trigger: CTGCTGAACTGGCATTTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp AGACTTGCACTGGAGGGGTGCCCTCCACTTTGCAGCCCAGCACTATaGGCTGCCCAGGGTTGGCAATATCATCATTTGGCTCCACAGAAA +
Preference number: 5 (lower is better)
Translates to: RLALEGCPPLCSPAL*AAQGWQYHHLAPQK
Trigger: TTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp ATTCATAGTCACCCTCATCTGAAGGGCTACCTCCTTGCTCCAGCCTaGAGTGGTGGATCAGCAAGGAGCCATTGGCCAGCAGAGTGGTGT +
Preference number: 5 (lower is better)
Translates to: IHSHPHLKGYLLAPA*SGGSARSHWPAEWC
Trigger: ACACCACTCTGCTGGCCAATGGCTCCTTGCTGATCCACCACTTCAGGCTGGAGCAAGGAGGTAGCCCTTCAGATGAGGGTGACTATGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 90 bp CAGCCCAAAGCGGTTCTGAGCCACACATTCATAGTCACCCTCATCTaGAGGGCTACCTCCTTGCTCCAGCCTGAAGTGGTGGATCAGCAA +
Preference number: 5 (lower is better)
Translates to: QPKAVLSHTFIVTLI*RATSLLQPEVVDQQ
Trigger: TTGCTGATCCACCACTTCAGGCTGGAGCAAGGAGGTAGCCCTTCAGATGAGGGTGACTATGAATGTGTGGCTCAGAACCGCTTTGGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp GTGACTCCGATGTGGATGCCGATAACAATGCCTGTAGTGGACGTATaGTTGGTGACATCTTCCTTCCGGCAGTCACATGGGGGAGTCAGG +
Preference number: 5 (lower is better)
Translates to: VTPMWMPITMPVVDV*LVTSSFRQSHGGVR
Trigger: CCTGACTCCCCCATGTGACTGCCGGAAGGAAGATGTCACCAACCATACGTCCACTACAGGCATTGTTATCGGCATCCACATCGGAGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTAAACTCTGCTGGAGCTaGTACCACCAGCCGACCCTG +
Preference number: 5 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLKLCWS*YHQPTL
Trigger: CAGGGTCGGCTGGTGGTACAAGCTCCAGCAGAGTTT...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACATTGGCTCGAGCAGGGAGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGGTTCTCAGCCACACATaGGTAGATGGCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: TLARAGRCLACRTHWFLWVLSHT*VDGLIF
Trigger: GAAGATGAGGCCATCTACCAATGTGTGGCTGAGAAC...CCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCTCCCTGCTCGAGCCAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGGGGGTGCCCTCCACTTaGCAGCCCAGCACTATGGGC +
Preference number: 5 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRGVPST*QPSTMG
Trigger: GCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCC...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp CAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAATGGGGTACCGCATCTGCAGGACTCCCTaGGGCAGTAGTGTGTACCTC +
Preference number: 5 (lower is better)
Translates to: QIPQNRKNLAFDLRMGYRICRTP*GSSVYL
Trigger: GAGGTACACACTACTGCCCAAGGGAGTCCTGCAGAT...GCGGTACCCCATTCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 90 bp AATGCTCAGTGTGCTGTTATTGTTCTTGAGCCTGACATGGCCTCCTaGCCCCAGCACTTGTCCATTCTTCAACCATGTGACATGAGGCGG +
Preference number: 5 (lower is better)
Translates to: NAQCAVIVLEPDMAS*PQHLSILQPCDMRR
Trigger: CCGCCTCATGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGAGGCCATGTCAGGCTCAAGAACAATAACAGCACACTGAGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp AGATGCCTTGCTTGTAGGACCCACTGGTTCCTGTGGTTTGAGAACCCTGTCCTTTCCTGCCCCCAGCACTaGTCCATTCTTCAACCATGT +
Preference number: 5 (lower is better)
Translates to: RCLACRTHWFLWFENPVLSCPQH*SILQPC
Trigger: ACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGA...AAGGACAGGGTTCTCAAACCACAGGAACCAGTGGGTCCTACAAGCAAGGCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp ACTGGCGAGCGCCAAATCCCACAGAACAGGAAAAACCTCGCCTTTGACCTGAGAGTGCTGTTATTGTTCTaGAGCCTGACATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: TGERQIPQNRKNLAFDLRVLLLF*SLTWPP
Trigger: AGGAGGCCATGTCAGGCTCAAGAACAATAACAGCAC...TCTCAGGTCAAAGGCGAGGTTTTTCCTGTTCTGTGGGATTTGGCGCTCGCCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp GCTGAGGTAGGTGCTGAGAGTCACAACAGCTCAAAATCCATCCTGAGAAAACAAAGCTTGAAGCCTCCATaGTGTTGGGCCAGCCGTGGC +
Preference number: 5 (lower is better)
Translates to: AEVGAESHNSSKSILRKQSLKPP*CWASRG
Trigger: GCCACGGCTGGCCCAACACAATGGAGGCTTCAAGCT...TTGTTTTCTCAGGATGGATTTTGAGCTGTTGTGACTCTCAGCACCTACCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp AACAGAAGAAAGAGGACGCAGAAGATGATGCAGGTGACTCCGATGTaGATGCCGATAACAATGCCTGTCCTCTCAGAGGCTCCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: NRRKRTQKMMQVTPM*MPITMPVLSEAPFR
Trigger: TCTGAAGGGAGCCTCTGAGAGGACAGGCATTGTTATCGGCATCCACATCGGAGTCACCTGCATCATCTTCTGCGTCCTCTTTCTTCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034961.6
CDS-3UTR CAA 90 bp CAGCGTCAGGGGCCGGGCCACAGCAGGGACATATTTTTGGAGTATAATTCACTTGTTCTCAGCCACACATaGGTAGATGGCCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: QRQGPGHSRDIFLEYNSLVLSHT*VDGLIF
Trigger: GAAGATGAGGCCATCTACCAATGTGTGGCTGAGAAC...AAGTGAATTATACTCCAAAAATATGTCCCTGCTGTGGCCCGGCCCCTGACGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp ACTCCAGAAATGCTCAGTGTGCTGTTATTGTTCTTGAGCCTGACATaGCCTCCTGCCCCCAGCACTTGTCCATTCTTCAACCATGTGACA +
Preference number: 5 (lower is better)
Translates to: TPEMLSVLLLFLSLT*PPAPSTCPFFNHVT
Trigger: TGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGAGGCCATGTCAGGCTCAAGAACAATAACAGCACACTGAGCATTTCTGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 90 bp AACAGAAGAAAGAGGACGCAGAAGATGATGCAGGTGACTCCGATGTaGATGCCGATAACAATGCCTGTAGTGGACGTATGGTTGGTGACA +
Preference number: 5 (lower is better)
Translates to: NRRKRTQKMMQVTPM*MPITMPVVDVWLVT
Trigger: TGTCACCAACCATACGTCCACTACAGGCATTGTTATCGGCATCCACATCGGAGTCACCTGCATCATCTTCTGCGTCCTCTTTCTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
CDS-3UTR CAA 90 bp TTTAAAGGAAAACGTTTGTTTCCTAAGTCCTATGGGCAGCAGGCATTGGTGAGGATCTGCAGGACTCCCTaGGGCAGTAGTGTGTACCTC +
Preference number: 5 (lower is better)
Translates to: FKGKRLFPKSYGQQALVRICRTP*GSSVYL
Trigger: GAGGTACACACTACTGCCCAAGGGAGTCCTGCAGAT...CCTCACCAATGCCTGCTGCCCATAGGACTTAGGAAACAAACGTTTTCCTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp GGCCTGGCAACCCCTCAGCCCACAGCACGGTCAGCCTaGCGCTGGCTTGCGACGAGCCAGCAATGTTCTCAG +
Preference number: 6 (lower is better)
Translates to: GLATPQPTARSA*RWLATSQQCSQ
Trigger: CTGAGAACATTGCTGGCTCGTCGCAAGCCAGCGCCAGGCTGACCGTGCTGTGGGCTGAGGGGTTGCCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp GGGTCTCCTCACATGGAGCAGGGGCTGCAGGATCCGTaGGTGTGGAGCCTGGCTGTGCAGCTGACCCAGCTG +
Preference number: 6 (lower is better)
Translates to: GSPHMEQGLQDP*VWSLAVQLTQL
Trigger: CAGCTGGGTCAGCTGCACAGCCAGGCTCCACACCCACGGATCCTGCAGCCCCTGCTCCATGTGAGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp CCACCCTCCTCACCCGTGACGGCCTGGGGGTGTACGTaGAAGTCGGACATAGTTGCAGCCTGGAGACGAGCC +
Preference number: 6 (lower is better)
Translates to: PPSSPVTAWGCT*KSDIVAAWRRA
Trigger: GGCTCGTCTCCAGGCTGCAACTATGTCCGACTTCCACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp AAGCGGGCCACACCACCCTCCTCACCCGTGACGGCCTaGGGGTGTACGTGGAAGTCGGACATAGTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: KRATPPSSPVTA*GCTWKSDIVAA
Trigger: GGCTGCAACTATGTCCGACTTCCACGTACACCCCCAGGCCGTCACGGGTGAGGAGGGTGGTGTGGCCCGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp GCAACCCCTCAGCCCACAGCACGGTCAGCCTGGCGCTaGCTTGCGACGAGCCAGCAATGTTCTCAGCCACAC +
Preference number: 6 (lower is better)
Translates to: ATPQPTARSAWR*LATSQQCSQPH
Trigger: GTGTGGCTGAGAACATTGCTGGCTCGTCGCAAGCCAGCGCCAGGCTGACCGTGCTGTGGGCTGAGGGGTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp GTGATCAGGGGCTTGGGAAGCCCATGGATTTGGCACTaGAAGCGGGCCACACCACCCTCCTCACCCGTGACG +
Preference number: 6 (lower is better)
Translates to: VIRGLGSPWIWH*KRATPPSSPVT
Trigger: CGTCACGGGTGAGGAGGGTGGTGTGGCCCGCTTCCAGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 72 bp CTCCAGGAGACTTGCACTGGAGGGGTGCCCTCCACTTaGCAGCCCAGCACTATGGGCTGCCCAGGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: LQETCTGGVPST*QPSTMGCPGLA
Trigger: TGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 72 bp CAACCATGTGACATGAGGCGGTGGCTCCCCCTGCGCTaGGCAGGTGAACATGGCTGTGGTCCCAGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: QPCDMRRWLPLR*AGEHGCGPSRP
Trigger: AGGCCTGCTGGGACCACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 90 bp GCTCCACAGAAAATGCCAGTTCAGCAGAATGGCCCAGACCCAGGCTaGGCGCAGGCAGCGGCAACAGCAGCAGCAGCAACAGCAGCGGCG +
Preference number: 6 (lower is better)
Translates to: APQKMPVQQNGPDPG*AQAAATAAAATAAA
Trigger: CGCCGCTGCTGTTGCTGCTGCTGCTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 90 bp GCCTGGCAACCCCTCAGCCCACAGCACGGTCAGCCTGGCGCTGGCTaGCGACGAGCCAGCAATGTTCTCAGCCACACATTGGTAGATGGC +
Preference number: 6 (lower is better)
Translates to: AWQPLSPQHGQPGAG*RRASNVLSHTLVDG
Trigger: GCCATCTACCAATGTGTGGCTGAGAACATTGCTGGCTCGTCGCAAGCCAGCGCCAGGCTGACCGTGCTGTGGGCTGAGGGGTTGCCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp CCTGGCCCCGTGGCTGACCCGCACACTAGCAATGTTTaGGGCCACACAGTGGAAGATGCCGCTGTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: PGPVADPHTSNV*GHTVEDAAVLS
Trigger: GCTGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTGCGGGTCAGCCACGGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp CTCCTGCCCCCAGCACTTGTCCATTCTTCAACCATGTaGCATGAGGCGGTGGCTCCCCCTGCGCTTGGCAGG +
Preference number: 6 (lower is better)
Translates to: LLPPALVHSSTM*HEAVAPPALGR
Trigger: CCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 72 bp TCCAGGAGACTTGCACTGGAGGGGTGCCCTCCACTTTaGAGCCCAGCACTATGGGCTGCCCAGGGTTGGCAA +
Preference number: 6 (lower is better)
Translates to: SRRLALEGCPPL*SPALWAAQGWQ
Trigger: TTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp GCCCCCAGCACTTGTCCATTCTTCAACCATGTGACATaGGGCGGTGGCTCCCCCTGCGCTTGGCAGGTGAAC +
Preference number: 6 (lower is better)
Translates to: APSTCPFFNHVT*GGGSPCAWQVN
Trigger: GTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGACAAGTGCTGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp AAATGCCAGTTCAGCAGAATGGCCCAGACCCAGGCTTaGCGCAGGCAGCGGCAACAGCAGCAGCAGCAACAG +
Preference number: 6 (lower is better)
Translates to: KCQFSRMAQTQA*RRQRQQQQQQQ
Trigger: CTGTTGCTGCTGCTGCTGTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 90 bp TCCATTCTTCAACCATGTGACATGAGGCGGTGGCTCCCCCTGCGCTaGGCAGGTGAACATGGCTGTGGTCCCAGCAGGCCTGGAGATGGA +
Preference number: 6 (lower is better)
Translates to: SILQPCDMRRWLPLR*AGEHGCGPSRPGDG
Trigger: TCCATCTCCAGGCCTGCTGGGACCACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp TGCAGGATCCGTGGGTGTGGAGCCTGGCTGTGCAGCTaGCCCAGCTGTGGGAAACAGCTGTTCCAACTCCTT +
Preference number: 6 (lower is better)
Translates to: CRIRGCGAWLCS*PSCGKQLFQLL
Trigger: AAGGAGTTGGAACAGCTGTTTCCCACAGCTGGGTCAGCTGCACAGCCAGGCTCCACACCCACGGATCCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 72 bp TCTGGTAGCTCTGCTCCATTCTTCCTCCAGGAGACTTaGACTGGAGGGGTGCCCTCCACTTTGCAGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SGSSAPFFLQET*TGGVPSTLQPS
Trigger: GCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAGAATGGAGCAGAGCTACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp TGGGGGTGTACGTGGAAGTCGGACATAGTTGCAGCCTaGAGACGAGCCTTCCGACTGACCAGCAGCCCAAAG +
Preference number: 6 (lower is better)
Translates to: WGCTWKSDIVAA*RRAFRLTSSPK
Trigger: CTTTGGGCTGCTGGTCAGTCGGAAGGCTCGTCTCCAGGCTGCAACTATGTCCGACTTCCACGTACACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 90 bp CCATTCTTCCTCCAGGAGACTTGCACTGGAGGGGTGCCCTCCACTTaGCAGCCCAGCACTATGGGCTGCCCAGGGTTGGCAATATCATCA +
Preference number: 6 (lower is better)
Translates to: PFFLQETCTGGVPST*QPSTMGCPGLAISS
Trigger: TGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAGTGCAAGTCTCCTGGAGGAAGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp GGGACGTGGCCTCTGTTGTCCTCCCTGCCACAAGGTTaGAGCCTTGAAGCTGAACCATGGAGAGCTGGGTCT +
Preference number: 6 (lower is better)
Translates to: GTWPLLSSLPQG*SLEAEPWRAGS
Trigger: AGACCCAGCTCTCCATGGTTCAGCTTCAAGGCTTCAACCTTGTGGCAGGGAGGACAACAGAGGCCACGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS GCA 72 bp GGGGTGCCCTCCACTTTGCAGCCCAGCACTATGGGCTaGCCAGGGTTGGCAATATCATCATTTGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: GVPSTLQPSTMG*PGLAISSFGST
Trigger: TGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp TCATTTGGCTCCACAGAAAATGCCAGTTCAGCAGAATaGCCCAGACCCAGGCTTGGCGCAGGCAGCGGCAAC +
Preference number: 6 (lower is better)
Translates to: SFGSTENASSAE*PRPRLGAGSGN
Trigger: GTTGCCGCTGCCTGCGCCAAGCCTGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAGCCAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp CTGGAGGGGTGCCCTCCACTTTGCAGCCCAGCACTATaGGCTGCCCAGGGTTGGCAATATCATCATTTGGCT +
Preference number: 6 (lower is better)
Translates to: LEGCPPLCSPAL*AAQGWQYHHLA
Trigger: AGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCAAAGTGGAGGGCACCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp TCTGAAGGGCTACCTCCTTGCTCCAGCCTGAAGTGGTaGATCAGCAAGGAGCCATTGGCCAGCAGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: SEGLPPCSSLKW*ISKEPLASRVV
Trigger: CACCACTCTGCTGGCCAATGGCTCCTTGCTGATCCACCACTTCAGGCTGGAGCAAGGAGGTAGCCCTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp ACATCTGAGATGATAAGGTTTCCTGTGCCCAGCACCTaGATGCCCTCCACCCCAATGGGGCGGCCATCCAAG +
Preference number: 6 (lower is better)
Translates to: TSEMIRFPVPST*MPSTPMGRPSK
Trigger: CTTGGATGGCCGCCCCATTGGGGTGGAGGGCATCCAGGTGCTGGGCACAGGAAACCTTATCATCTCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp CTGACCCGCACACTAGCAATGTTTGAGGCCACACAGTaGAAGATGCCGCTGTCCTCAGCCCGAAGTCCTGTT +
Preference number: 6 (lower is better)
Translates to: LTRTLAMFEATQ*KMPLSSARSPV
Trigger: AACAGGACTTCGGGCTGAGGACAGCGGCATCTTCCACTGTGTGGCCTCAAACATTGCTAGTGTGCGGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp CACTTGTCCATTCTTCAACCATGTGACATGAGGCGGTaGCTCCCCCTGCGCTTGGCAGGTGAACATGGCTGT +
Preference number: 6 (lower is better)
Translates to: HLSILQPCDMRR*LPLRLAGEHGC
Trigger: ACAGCCATGTTCACCTGCCAAGCGCAGGGGGAGCCACCGCCTCATGTCACATGGTTGAAGAATGGACAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 72 bp GGCCTCTGTTGTCCTCCCTGCCACAAGGTTGAAGCCTaGAAGCTGAACCATGGAGAGCTGGGTCTCCTCACA +
Preference number: 6 (lower is better)
Translates to: GLCCPPCHKVEA*KLNHGELGLLT
Trigger: TGTGAGGAGACCCAGCTCTCCATGGTTCAGCTTCAAGGCTTCAACCTTGTGGCAGGGAGGACAACAGAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp GCGGTTCTGAGCCACACATTCATAGTCACCCTCATCTaGAGGGCTACCTCCTTGCTCCAGCCTGAAGTGGTG +
Preference number: 6 (lower is better)
Translates to: AVLSHTFIVTLI*RATSLLQPEVV
Trigger: CACCACTTCAGGCTGGAGCAAGGAGGTAGCCCTTCAGATGAGGGTGACTATGAATGTGTGGCTCAGAACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp CAAGGTCTCTCACCAGGTGCTGAAAGGTGCTCTTGCTaGCAGCTTCCTGGTACTCTAGCTTGGGTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: QGLSPGAERCSC*QLPGTLAWVSR
Trigger: CCGACTCACCCAAGCTAGAGTACCAGGAAGCTGTCAGCAAGAGCACCTTTCAGCACCTGGTGAGAGACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp TCTCAGAGGCTCCCTTCAGAGACACAAATCGGACCGTaGCGTTTCCATCTCCATGCTGGTTGTAGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SQRLPSETQIGP*RFHLHAGCRPG
Trigger: TCCTGGCCTACAACCAGCATGGAGATGGAAACGCCACGGTCCGATTTGTGTCTCTGAAGGGAGCCTCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 72 bp TCCTCAGCCCGAAGTCCTGTTATCTGCAGGACTCCCTaGGGCAGTAGTGTGTACCTCTCATCGTCCGTGTCA +
Preference number: 6 (lower is better)
Translates to: SSARSPVICRTP*GSSVYLSSSVS
Trigger: TGACACGGACGATGAGAGGTACACACTACTGCCCAAGGGAGTCCTGCAGATAACAGGACTTCGGGCTGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CAA 90 bp TGCAGCCCAGCACTATGGGCTGCCCAGGGTTGGCAATATCATCATTaGGCTCCACAGAAAATGCCAGTTCAGCAGAATGGCCCAGACCCA +
Preference number: 6 (lower is better)
Translates to: CSPALWAAQGWQYHH*APQKMPVQQNGPDP
Trigger: TGGGTCTGGGCCATTCTGCTGAACTGGCATTTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTGCTGGGCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS TCA 72 bp CGTCCGTGTCAATGGGAACTCTGTTCTTCTCCCATGTaGTCAGGGGCTTGGGAAGCCCATGGATTTGGCACT +
Preference number: 6 (lower is better)
Translates to: RPCQWELCSSPM*SGAWEAHGFGT
Trigger: AGTGCCAAATCCATGGGCTTCCCAAGCCCCTGATCACATGGGAGAAGAACAGAGTTCCCATTGACACGGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp AAGAGGACGCAGAAGATGATGCAGGTGACTCCGATGTaGATGCCGATAACAATGCCTGTCCTCTCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: KRTQKMMQVTPM*MPITMPVLSEA
Trigger: AGCCTCTGAGAGGACAGGCATTGTTATCGGCATCCACATCGGAGTCACCTGCATCATCTTCTGCGTCCTCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034961.6
CDS GCA 72 bp TGTGCTGTTATTGTTCTTGAGCCTGACATGGCCTCCTaGCCCCAGCACTTGTCCATTCTTCAACCATGTGAC +
Preference number: 6 (lower is better)
Translates to: CAVIVLEPDMAS*PQHLSILQPCD
Trigger: GTCACATGGTTGAAGAATGGACAAGTGCTGGGGGCAGGAGGCCATGTCAGGCTCAAGAACAATAACAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp CACTATGGGCTGCCCAGGGTTGGCAATATCATCATTTaGCTCCACAGAAAATGCCAGTTCAGCAGAATGGCC +
Preference number: 6 (lower is better)
Translates to: HYGLPRVGNIII*LHRKCQFSRMA
Trigger: GGCCATTCTGCTGAACTGGCATTTTCTGTGGAGCCAAATGATGATATTGCCAACCCTGGGCAGCCCATAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034961.6
ENSMUST00000217371.2
CDS CCA 72 bp ATGTGGATGCCGATAACAATGCCTGTAGTGGACGTATaGTTGGTGACATCTTCCTTCCGGCAGTCACATGGG +
Preference number: 6 (lower is better)
Translates to: MWMPITMPVVDV*LVTSSFRQSHG
Trigger: CCCATGTGACTGCCGGAAGGAAGATGTCACCAACCATACGTCCACTACAGGCATTGTTATCGGCATCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2
CDS CCA 72 bp AAGAGGACGCAGAAGATGATGCAGGTGACTCCGATGTaGATGCCGATAACAATGCCTGTAGTGGACGTATGG +
Preference number: 6 (lower is better)
Translates to: KRTQKMMQVTPM*MPITMPVVDVW
Trigger: CCATACGTCCACTACAGGCATTGTTATCGGCATCCACATCGGAGTCACCTGCATCATCTTCTGCGTCCTCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000217371.2