Pregenerated sensors for IGBP1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046717Ensembl transcript IDs: ENSMUST00000054786.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCAAGCATCTGCCTTTGTTaGACACTTCTGAAGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPSICLC*TLLKQG Trigger: CCCCTGCTTCAGAAGTGTGCAACAAAGGCAGATGCT...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| 3UTR-3UTR TCA 90 bp | TATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCCCTTGTCTGGGAAGGTaGGAGCTCCTTCATCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: YTAISPNSFYPLKKLQYTPCLGR*ELLHLF Trigger: GAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGG...GGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| 3UTR-3UTR GCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCAGCAAGATTCAGCATCTaGCTTTGTTGCACACTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPARFSI*LCCTLL Trigger: CAGAAGTGTGCAACAAAGGCAGATGCTGAATCTTGC...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| 3UTR-3UTR CAA 90 bp | TATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCAGAGAGAACAGGGTTTTCCTaGTCTGGGAAGGTGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: YPLKKLQYTMVRAMPKPERTGFS*SGKVRA Trigger: AGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCT...CTCTGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | AGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTCACACCGGGGTTGCCTTCCGTTaGGCTGCTCTGGGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RTGFSLSGKVRAPSSFHTGVAFR*AALGPG Trigger: CCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCC...GGTGTGAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | GGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTCACACCGAGGGGCTGGCCGCTCTCCACTaGCGATTTCAGAGAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: GFSLSGKVRAPSSFHTEGLAALH*RFQRRQ Trigger: CTGTCTTCTCTGAAATCGGCAGTGGAGAGCGGCCAG...CCCCTCGGTGTGAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | GGGAAGAGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTTTGGAGCCTGTGGGTTaGGTCGCAGCTTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: GKRTGFSLSGKVRAPSSFLEPVG*VAASTS Trigger: GGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAA...AAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCTCTTCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | GGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTCACACCGAGGGGTCTTCATCTTCCTTTTaGTCCAGGTCTGGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GFSLSGKVRAPSSFHTEGSSSSF*SRSGSS Trigger: GGAAGAGCCAGACCTGGAGCAAAAGGAAGATGAAGA...CCCCTCGGTGTGAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCACCTGGGCATCAGAGGTaGCAGCGGGGTTGCCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPPGHQR*QRGCLP Trigger: CGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGG...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCATGCCTTCCGTTGAGCTaGTCTGGGCCCAGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPCLPLS*SGPRAA Trigger: AGCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCA...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | AGGGAAGAGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTCTCTGGATTTTGGTCTaGCTCTGGGATGCCATGGCA | + |
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Preference number: 4 (lower is better) Translates to: REENRVFLVWEGESSFIFLWILV*LWDAMA Trigger: TGCCATGGCATCCCAGAGGCAGACCAAAATCCAGAG...AAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCTCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | AGGGAAGAGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTCACCTTTTCCTGGATTaGCTTGGAGCCTGTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: REENRVFLVWEGESSFIFHLFLD*LGACGL Trigger: CAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTG...AAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCTCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | TACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATGGCCTAGGCGTTTGCTaGTGCCCACCAGCTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: YSHFSELFLSTKETAIHHGLGVC*CPPASA Trigger: CGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCC...ATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCACTAGGCGTTTGCTGCTaGCCACCAGCTTCAGCGTCA | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPLGVCC*PPASAS Trigger: TGACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAG...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | GGGAAGAGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTTCCACCGCCTTCTTCTaGTTGTACCTCTGGATTTTG | + |
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Preference number: 4 (lower is better) Translates to: GKRTGFSLSGKVRAPSSFSTAFF*LYLWIL Trigger: CAAAATCCAGAGGTACAAGCAGAAGAAGGCGGTGGA...AAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCTCTTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | AGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTCACACCAATCTTCGTTCCTGCTaGACAAATCGAGCTGCGATA | + |
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Preference number: 4 (lower is better) Translates to: RTGFSLSGKVRAPSSFHTNLRSC*TNRAAI Trigger: TATCGCAGCTCGATTTGTTCAGCAGGAACGAAGATT...GGTGTGAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | GATTATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACAGTGGAGGCCTCTCCTaGGGAGATGAGCGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: DYTAISPNSFYPLKKLQYSGGLS*GDERDA Trigger: AGCATCTCGCTCATCTCCTCAGGAGAGGCCTCCACT...GTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | TACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATATGGCAACCAGGTTTTaGTCCTGGGCATCAGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: YSHFSELFLSTKETAIHHMATRF*SWASEV Trigger: CACCTCTGATGCCCAGGAGCAAAACCTGGTTGCCAT...ATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCATTCCTGAAGAGTTGGTaGGACCTCATTTTTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPFLKSW*DLIFLA Trigger: CGCCAGAAAAATGAGGTCTCACCAACTCTTCAGGAA...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCATGCTTTTCTGCTTCCTaGAGAGTTGGTGAGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPCFSAS*RVGETS Trigger: TGAGGTCTCACCAACTCTTCAGGAAGCAGAAAAGCA...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR TCA 90 bp | TCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATCCTTCTCAGATACAGTaGAAGTCTCAGATGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SELFLSTKETAIHHGESNPSQIQ*KSQMVV Trigger: CACCACCATCTGAGACTTTCACTGTATCTGAGAAGG...ATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | TATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATTCACGGTCATAGTTaGCAGACTTGGGTACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: YTAISPNSFYPLKKLQYTIHGHS*QTWVPS Trigger: GCTGGGTACCCAAGTCTGGCAACTATGACCGTGAAT...GGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR GCA 90 bp | AGAAATCATACAGTCAATGATTATACAGCCATTTCTCCGAACTCTTTCTATCCACAGTCATCCCACTCCTaGATCCTGTGGAGGGCATTC | + |
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Preference number: 4 (lower is better) Translates to: RNHTVNDYTAISPNSFYPQSSHS*ILWRAF Trigger: GAATGCCCTCCACAGGATGCAGGAGTGGGATGACTG...TGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATCATTGACTGTATGATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | ATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGATGTACCTCTGGATTTTaGTCTGCCTCTGGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: ISPNSFYPLKKLQYTMVRCTSGF*SASGMP Trigger: TGGCATCCCAGAGGCAGACCAAAATCCAGAGGTACA...TCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCATTCTGCTTGTACCTCTaGATTTTGGTCTGCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPFCLYL*ILVCLW Trigger: CCAGAGGCAGACCAAAATCCAGAGGTACAAGCAGAA...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | TTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCAGAAAGTCTCAGATGGTaGTGCCTGCTTTTCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FYPLKKLQYTMVRAMPKPESLRW*CLLFCF Trigger: GAAGCAGAAAAGCAGGCACCACCATCTGAGACTTTC...TGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | GATTATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACCCAAACACTTGTGCTTaGGCAACACTTCGAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: DYTAISPNSFYPLKKLQYPNTCA*ATLRVR Trigger: CCTCACTCGAAGTGTTGCCCAAGCACAAGTGTTTGG...GTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | TACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATAGTGAAAGTCTCAGATaGTGGTGCCTGCTTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: YSHFSELFLSTKETAIHHSESLR*WCLLFC Trigger: GCAGAAAAGCAGGCACCACCATCTGAGACTTTCACT...ATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CCA 90 bp | GATTATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACCACTCCTGCATCCTGTaGAGGGCATTCTCATCTTCA | + |
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Preference number: 4 (lower is better) Translates to: DYTAISPNSFYPLKKLQYHSCIL*RAFSSS Trigger: TGAAGATGAGAATGCCCTCCACAGGATGCAGGAGTG...GTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 90 bp | TCTGGGATGCCATGGCAACCAGGTTTTGCTCCTGGGCATCAGAGGTaGCAGCGGGGTTGCCTTCCGTTGAGCTGCTCTGGGCCCAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGMPWQPGFAPGHQR*QRGCLPLSCSGPRA Trigger: TGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACCTGGTTGCCATGGCATCCCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 90 bp | GCTCCTGGGCATCAGAGGTGGCAGCGGGGTTGCCTTCCGTTGAGCTaGTCTGGGCCCAGGGCAGCTGAAAATCAGCCACATGGTAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: APGHQRWQRGCLPLS*SGPRAAENQPHGSC Trigger: ACAGCTACCATGTGGCTGATTTTCAGCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 90 bp | GGCCTTCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTGGATTaGCTTGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GLLQELQGLPHLFLD*LGACGLGRSFHLLQ Trigger: CTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 90 bp | TCCGAGGCCTTCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTaGATTGGCTTGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SEAFSRSFKASLTFS*IGLEPVGWVAASTS Trigger: GGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGAAGGCCTCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 90 bp | GCTTCAAGGCCTCCCTCACCTTTTCCTGGATTGGCTTGGAGCCTGTaGGTTGGGTCGCAGCTTCCACCTCCTCCAGAAGTTGTATGCCGG | + |
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Preference number: 5 (lower is better) Translates to: ASRPPSPFPGLAWSL*VGSQLPPPPEVVCR Trigger: CCGGCATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 90 bp | CTGTGGGTCTGGGTTAGGAAGTTCATGAAGTGTTCTCGAGCATCCTaGAGGAGGCCTAGGCGTTTGCTGCTGCCCACCAGCTTCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: LWVWVRKFMKCSRAS*RRPRRLLLPTSFSV Trigger: GACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAGAACACTTCATGAACTTCCTAACCCAGACCCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 90 bp | TCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTGGATTGGCTTaGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCTCCAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: SPGASRPPSPFPGLA*SLWVGSQLPPPPEV Trigger: AACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 90 bp | ACTGCCGATTTCAGAGAAGACAGCCTCTGCTCCACCGCCTTCTTCTaGTTGTACCTCTGGATTTTGGTCTGCCTCTGGGATGCCATGGCA | + |
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Preference number: 5 (lower is better) Translates to: TADFREDSLCSTAFF*LYLWILVCLWDAMA Trigger: TGCCATGGCATCCCAGAGGCAGACCAAAATCCAGAGGTACAAGCAGAAGAAGGCGGTGGAGCAGAGGCTGTCTTCTCTGAAATCGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS TCA 90 bp | AGTCTCAGATGGTGGTGCCTGCTTTTCTGCTTCCTGAAGAGTTGGTaGGACCTCATTTTTCTGGCGCTGCTCGTACCAGTCATTCACGGT | + |
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Preference number: 5 (lower is better) Translates to: SLRWWCLLFCFLKSW*DLIFLALLVPVIHG Trigger: ACCGTGAATGACTGGTACGAGCAGCGCCAGAAAAATGAGGTCTCACCAACTCTTCAGGAAGCAGAAAAGCAGGCACCACCATCTGAGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | TATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATGCCTAAACCAGAGAGGAGGCCTAGGCGTTaGCTGCTGCCCACCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: YPLKKLQYTMVRAMPKPERRPRR*LLPTSF Trigger: GAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCT...CTCTGGTTTAGGCATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS TCA 90 bp | GATACAGTGAAAGTCTCAGATGGTGGTGCCTGCTTTTCTGCTTCCTaGAGAGTTGGTGAGACCTCATTTTTCTGGCGCTGCTCGTACCAG | + |
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Preference number: 5 (lower is better) Translates to: DTVKVSDGGACFSAS*RVGETSFFWRCSYQ Trigger: CTGGTACGAGCAGCGCCAGAAAAATGAGGTCTCACCAACTCTTCAGGAAGCAGAAAAGCAGGCACCACCATCTGAGACTTTCACTGTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 90 bp | CACTCCTGCATCCTGTGGAGGGCATTCTCATCTTCATCTTCCTTTTaGTCCAGGTCTGGCTCTTCCTTCTCAGATACAGTGAAAGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: HSCILWRAFSSSSSF*SRSGSSFSDTVKVS Trigger: TGAGACTTTCACTGTATCTGAGAAGGAAGAGCCAGACCTGGAGCAAAAGGAAGATGAAGATGAGAATGCCCTCCACAGGATGCAGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | AGAACAGGGTTTTCCTTGTCTGGGAAGGTGAGAGCTCCTTCATCTTTTCACACCATCTTCATCTTCCTTTaGCTCCAGGTCTGGCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RTGFSLSGKVRAPSSFHTIFIFL*LQVWLF Trigger: GAAGAGCCAGACCTGGAGCAAAAGGAAGATGAAGAT...GGTGTGAAAAGATGAAGGAGCTCTCACCTTCCCAGACAAGGAAAACCCTGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | TATACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCTTTTCCTGGATTGGCTaGGAGCCTGTGGGTTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: YTAISPNSFYPLKKLQYTFSWIG*EPVGWV Trigger: GACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAA...GGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | TCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATGGTGAGAGCAATACCGCCTTCTTCTGCTaGTACCTCTGGATTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: SELFLSTKETAIHHGESNTAFFC*YLWILV Trigger: GACCAAAATCCAGAGGTACAAGCAGAAGAAGGCGGT...ATTGCTCTCACCATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | AGAAATCATACAGTCAATGATTATACAGCCATTTCTCCGAACTCTTTCTATCCACCCAGCTCCAAACACTaGTGCTTGGGCAACACTTCG | + |
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Preference number: 5 (lower is better) Translates to: RNHTVNDYTAISPNSFYPPSSKH*CLGNTS Trigger: CGAAGTGTTGCCCAAGCACAAGTGTTTGGAGCTGGG...TGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATCATTGACTGTATGATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | AGAAATCATACAGTCAATGATTATACAGCCATTTCTCCGAACTCTTTCTATCCATTGTACCTCTGGATTTaGGTCTGCCTCTGGGATGCC | + |
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Preference number: 5 (lower is better) Translates to: RNHTVNDYTAISPNSFYPLYLWI*VCLWDA Trigger: GGCATCCCAGAGGCAGACCAAAATCCAGAGGTACAA...TGGATAGAAAGAGTTCGGAGAAATGGCTGTATAATCATTGACTGTATGATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS-3UTR CAA 90 bp | TACAGCCATTTCTCCGAACTCTTTCTATCCACTAAAGAAACTGCAATACACCATCTGCTTCCTGAAGAGTaGGTGAGACCTCATTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: YSHFSELFLSTKETAIHHLLPEE*VRPHFS Trigger: AGAAAAATGAGGTCTCACCAACTCTTCAGGAAGCAG...ATGGTGTATTGCAGTTTCTTTAGTGGATAGAAAGAGTTCGGAGAAATGGCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | CTCGAGCATCCTGCAGGAGGCCTAGGCGTTTGCTGCTaGCCACCAGCTTCAGCGTCAGCGCGCCCTTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: LEHPAGGLGVCC*PPASASARPSG Trigger: CCCTGAAGGGCGCGCTGACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | GGTTTTGCTCCTGGGCATCAGAGGTGGCAGCGGGGTTaGCTTCCGTTGAGCTGCTCTGGGCCCAGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GFAPGHQRWQRG*LPLSCSGPRAA Trigger: AGCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | AGGTTTTGCTCCTGGGCATCAGAGGTGGCAGCGGGGTaGCCTTCCGTTGAGCTGCTCTGGGCCCAGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RFCSWASEVAAG*PSVELLWAQGS Trigger: GCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS TCA 72 bp | CTGGGCATCAGAGGTGGCAGCGGGGTTGCCTTCCGTTaGGCTGCTCTGGGCCCAGGGCAGCTGAAAATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LGIRGGSGVAFR*AALGPGQLKIS Trigger: GCTGATTTTCAGCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | GTTCTCGAGCATCCTGCAGGAGGCCTAGGCGTTTGCTaGTGCCCACCAGCTTCAGCGTCAGCGCGCCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VLEHPAGGLGVC*CPPASASARPS Trigger: TGAAGGGCGCGCTGACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAGAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | AAGTGTTCTCGAGCATCCTGCAGGAGGCCTAGGCGTTaGCTGCTGCCCACCAGCTTCAGCGTCAGCGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: KCSRASCRRPRR*LLPTSFSVSAP Trigger: GGGCGCGCTGACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAGAACACTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 90 bp | AAGTTCATGAAGTGTTCTCGAGCATCCTGCAGGAGGCCTAGGCGTTaGCTGCTGCCCACCAGCTTCAGCGTCAGCGCGCCCTTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KFMKCSRASCRRPRR*LLPTSFSVSAPFRA Trigger: GGCCCTGAAGGGCGCGCTGACGCTGAAGCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAGAACACTTCATGAACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | CATCAGAGGTGGCAGCGGGGTTGCCTTCCGTTGAGCTaGTCTGGGCCCAGGGCAGCTGAAAATCAGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: HQRWQRGCLPLS*SGPRAAENQPH Trigger: ATGTGGCTGATTTTCAGCTGCCCTGGGCCCAGAGCAGCTCAACGGAAGGCAACCCCGCTGCCACCTCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | TTGGTCTGCCTCTGGGATGCCATGGCAACCAGGTTTTaGTCCTGGGCATCAGAGGTGGCAGCGGGGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVCLWDAMATRF*SWASEVAAGLP Trigger: AGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACCTGGTTGCCATGGCATCCCAGAGGCAGACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 72 bp | TGCCTCTGGGATGCCATGGCAACCAGGTTTTGCTCCTaGGCATCAGAGGTGGCAGCGGGGTTGCCTTCCGTT | + |
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Preference number: 6 (lower is better) Translates to: CLWDAMATRFCS*ASEVAAGLPSV Trigger: AACGGAAGGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACCTGGTTGCCATGGCATCCCAGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | TTTGGTCTGCCTCTGGGATGCCATGGCAACCAGGTTTaGCTCCTGGGCATCAGAGGTGGCAGCGGGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FGLPLGCHGNQV*LLGIRGGSGVA Trigger: GGCAACCCCGCTGCCACCTCTGATGCCCAGGAGCAAAACCTGGTTGCCATGGCATCCCAGAGGCAGACCAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 90 bp | AGGCCTTCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTGGATaGGCTTGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RPSPGASRPPSPFPG*AWSLWVGSQLPPPP Trigger: TGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGAAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 72 bp | GCTTCAAGGCCTCCCTCACCTTTTCCTGGATTGGCTTaGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: ASRPPSPFPGLA*SLWVGSQLPPP Trigger: AGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | TGTGGGTTGGGTCGCAGCTTCCACCTCCTCCAGAAGTaGTATGCCGGTTTCCAACAGCTCCCGGAGCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: CGLGRSFHLLQK*YAGFQQLPELR Trigger: CCGAAGCTCCGGGAGCTGTTGGAAACCGGCATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | AGCTTCAAGGCCTCCCTCACCTTTTCCTGGATTGGCTaGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SFKASLTFSWIG*EPVGWVAASTS Trigger: GGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | CCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTGGATaGGCTTGGAGCCTGTGGGTTGGGTCGCAGCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PGASRPPSPFPG*AWSLWVGSQLP Trigger: TGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 90 bp | CTTGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCTCCAGAAGTaGTATGCCGGTTTCCAACAGCTCCCGGAGCTTCGGCTTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LGACGLGRSFHLLQK*YAGFQQLPELRLLH Trigger: ATGCAGAAGCCGAAGCTCCGGGAGCTGTTGGAAACCGGCATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 90 bp | CAAGGCCTCCCTCACCTTTTCCTGGATTGGCTTGGAGCCTGTGGGTaGGGTCGCAGCTTCCACCTCCTCCAGAAGTTGTATGCCGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QGLPHLFLDWLGACG*GRSFHLLQKLYAGF Trigger: GAAACCGGCATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 90 bp | TTCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTGGATTGGCTaGGAGCCTGTGGGTTGGGTCGCAGCTTCCACCTCCTCCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FSRSFKASLTFSWIG*EPVGWVAASTSSRS Trigger: ACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 72 bp | TTCTCCAGGAGCTTCAAGGCCTCCCTCACCTTTTCCTaGATTGGCTTGGAGCCTGTGGGTTGGGTCGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSRSFKASLTFS*IGLEPVGWVAA Trigger: AGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGGGAGGCCTTGAAGCTCCTGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | TGGGTTAGGAAGTTCATGAAGTGTTCTCGAGCATCCTaGAGGAGGCCTAGGCGTTTGCTGCTGCCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: WVRKFMKCSRAS*RRPRRLLLPTS Trigger: GCTGGTGGGCAGCAGCAAACGCCTAGGCCTCCTGCAGGATGCTCGAGAACACTTCATGAACTTCCTAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CCA 72 bp | CTCACCTTTTCCTGGATTGGCTTGGAGCCTGTGGGTTaGGTCGCAGCTTCCACCTCCTCCAGAAGTTGTATG | + |
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Preference number: 6 (lower is better) Translates to: LTFSWIGLEPVG*VAASTSSRSCM Trigger: CATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | CCTCACCTTTTCCTGGATTGGCTTGGAGCCTGTGGGTaGGGTCGCAGCTTCCACCTCCTCCAGAAGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: PHLFLDWLGACG*GRSFHLLQKLY Trigger: ATACAACTTCTGGAGGAGGTGGAAGCTGCGACCCAACCCACAGGCTCCAAGCCAATCCAGGAAAAGGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | CTGCTTGTACCTCTGGATTTTGGTCTGCCTCTGGGATaGCATGGCAACCAGGTTTTGCTCCTGGGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLVPLDFGLPLG*HGNQVLLLGIR Trigger: TCTGATGCCCAGGAGCAAAACCTGGTTGCCATGGCATCCCAGAGGCAGACCAAAATCCAGAGGTACAAGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS TCA 72 bp | TGGTGGTGCCTGCTTTTCTGCTTCCTGAAGAGTTGGTaGGACCTCATTTTTCTGGCGCTGCTCGTACCAGTC | + |
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Preference number: 6 (lower is better) Translates to: WWCLLFCFLKSW*DLIFLALLVPV Trigger: GACTGGTACGAGCAGCGCCAGAAAAATGAGGTCTCACCAACTCTTCAGGAAGCAGAAAAGCAGGCACCACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS GCA 72 bp | TTCAGAGAAGACAGCCTCTGCTCCACCGCCTTCTTCTaGTTGTACCTCTGGATTTTGGTCTGCCTCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: FREDSLCSTAFF*LYLWILVCLWD Trigger: ATCCCAGAGGCAGACCAAAATCCAGAGGTACAAGCAGAAGAAGGCGGTGGAGCAGAGGCTGTCTTCTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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| CDS CAA 72 bp | CATCCTGTGGAGGGCATTCTCATCTTCATCTTCCTTTaGCTCCAGGTCTGGCTCTTCCTTCTCAGATACAGT | + |
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Preference number: 6 (lower is better) Translates to: HPVEGILIFIFL*LQVWLFLLRYS Trigger: ACTGTATCTGAGAAGGAAGAGCCAGACCTGGAGCAAAAGGAAGATGAAGATGAGAATGCCCTCCACAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054786.6 |
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