Pregenerated sensors for IFTAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027165Ensembl transcript IDs: ENSMUST00000090513.11, ENSMUST00000099682.9, ENSMUST00000111231.10, ENSMUST00000128898.3, ENSMUST00000136601.9, ENSMUST00000160037.8, ENSMUST00000160722.8, ENSMUST00000177152.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTCATGGAGTTCGCACACGTTTGTACCGGAACCCACTCTCTTTTaGTTAGATAGCTCTTGGATGGTTGCTATCTCTCCAGCAGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: QSWSSHTFVPEPTLF*LDSSWMVAISPAVN Trigger: GTTTACTGCTGGAGAGATAGCAACCATCCAAGAGCTATCTAAGCAAAAGAGAGTGGGTTCCGGTACAAACGTGTGCGAACTCCATGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136601.9 |
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| 3UTR TCA 90 bp | TTATCCTTCTTCAGTGCCTGTATCCCTCTCTACTCGTTCCCTCGGTaGCCTTATGAGTCATCTGCAGAGTTACTACTCCATGGTACATTT | + |
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Preference number: 1 (lower is better) Translates to: LSFFSACIPLYSFPR*PYESSAELLLHGTF Trigger: AAATGTACCATGGAGTAGTAACTCTGCAGATGACTCATAAGGTCACCGAGGGAACGAGTAGAGAGGGATACAGGCACTGAAGAAGGATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR TCA 90 bp | GCCACGTGTGACCATGTGAAGGAACCCAGAGAATATTGTCATAAGTaGAATAAGCGAGACACCAAAGGGCAGACAATGCATGTCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: ATCDHVKEPREYCHK*NKRDTKGQTMHVHF Trigger: GAAATGGACATGCATTGTCTGCCCTTTGGTGTCTCGCTTATTTCACTTATGACAATATTCTCTGGGTTCCTTCACATGGTCACACGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCCCACAGGACATGGCCATaGGACAGAAGAGAAAGCGAT | + |
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Preference number: 2 (lower is better) Translates to: SLYGALITCRFSIPYLLPHRTWP*DRRESD Trigger: ATCGCTTTCTCTTCTGTCCCATGGCCATGTCCTGTG...GGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCAGCAGTCACAGGACATaGCCATGGGACAGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: VLVWCLNHMQIQHPLSPASSHRT*PWDRRE Trigger: TTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGCT...GGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR CCA 90 bp | CAACACACTCAAGTCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCAGCAGTCACAGGACATaGCCATGGGACAGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: QHTQVLVWCLNHMQIQHPSSHRT*PWDRRE Trigger: TTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGCT...GGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGACTTGAGTGTGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCCCGATCTCTTTGGTCTTaGTTAATCTGTGTCCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLYGALITCRFSIPYLLPRSLWS*LICVLV Trigger: CACCAGGACACAGATTAATCAAGACCAAAGAGATCG...GGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR GCA 90 bp | CATGGCCATGGGACAGAAGAGAAAGCGATCTCTTTGGTCTTGATTAATCTGTGTGCATCCCTTATCTCCTaGCCCATTTCCCTCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: HGHGTEEKAISLVLINLCASLIS*PISLFH Trigger: ATGGAAGAGGGAAATGGGGCAGGAGATAAGGGATGC...ACACAGATTAATCAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR TCA 90 bp | CAACACACTCAAGTCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCGGTGATAAACAACAGTaGCAAATGAATACAGCCGCG | + |
|
Preference number: 2 (lower is better) Translates to: QHTQVLVWCLNHMQIQHPGDKQQ*QMNTAA Trigger: CGCGGCTGTATTCATTTGTCACTGTTGTTTATCACC...GGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGACTTGAGTGTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR TCA 90 bp | CACATACATTCCCAGTCTTCAGCACAACACACTCAAGTCCTTGTATGGTGCCTTCGATCTCTTTGGTCTTaGTTAATCTGTGTCCTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HIHSQSSAQHTQVLVWCLRSLWS*LICVLV Trigger: CACCAGGACACAGATTAATCAAGACCAAAGAGATCG...AAGGCACCATACAAGGACTTGAGTGTGTTGTGCTGAAGACTGGGAATGTATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR GCA 90 bp | CACATACATTCCCAGTCTTCAGCACAACACACTCAAGTCCTTGTATGGTGCCTTGAACCCACTCTCTTTTaGTTAGATAGCTCTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: HIHSQSSAQHTQVLVWCLEPTLF*LDSSWM Trigger: CATCCAAGAGCTATCTAAGCAAAAGAGAGTGGGTTC...AAGGCACCATACAAGGACTTGAGTGTGTTGTGCTGAAGACTGGGAATGTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136601.9 |
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| 3UTR-3UTR GCA 90 bp | CATGGCCATGGGACAGAAGAGAAAGCGATCTCTTTGGTCTTGATTAATCTGTGTCAAGTCCTTGTATGGTaGCTTAATCACATGCAGATT | + |
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Preference number: 2 (lower is better) Translates to: HGHGTEEKAISLVLINLCQVLVW*LNHMQI Trigger: AATCTGCATGTGATTAAGGCACCATACAAGGACTTG...ACACAGATTAATCAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACAGAGCCTACTCACTCTACTTTGTAACTGTCAGATATGATTTACTGATAGGTGATAAACAACAGTaGCAAATGAATACAGCCGCG | + |
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Preference number: 2 (lower is better) Translates to: GDRAYSLYFVTVRYDLLIGDKQQ*QMNTAA Trigger: CGCGGCTGTATTCATTTGTCACTGTTGTTTATCACC...TATCAGTAAATCATATCTGACAGTTACAAAGTAGAGTGAGTAGGCTCTGTCTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR CAA 90 bp | AATATTGTGTACATGGTTTGCAATATTGAACTGTGTGCCCAAGCATaGAAGATGGTGGCTCTCATGTCTTCTTACCACAAGAGACGAAAA | + |
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Preference number: 2 (lower is better) Translates to: NIVYMVCNIELCAQA*KMVALMSSYHKRRK Trigger: TTTTCGTCTCTTGTGGTAAGAAGACATGAGAGCCACCATCTTCAATGCTTGGGCACACAGTTCAATATTGCAAACCATGTACACAATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR CCA 72 bp | TTTCCCTCTTCCATCGTCCCAAGCAGTCACAGGACATaGCCATGGGACAGAAGAGAAAGCGATCTCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: FPSSIVPSSHRT*PWDRRESDLFG Trigger: ACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGCTTGGGACGATGGAAGAGGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR CCA 72 bp | TCTTCCATCGTCCCAAGCAGTCACAGGACATGGCCATaGGACAGAAGAGAAAGCGATCTCTTTGGTCTTGAT | + |
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Preference number: 3 (lower is better) Translates to: SSIVPSSHRTWP*DRRESDLFGLD Trigger: ATCAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGCTTGGGACGATGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR CCA 72 bp | AGACACCAAAGGGCAGACAATGCATGTCCATTTCCATaGGGTGTCTCCAGCAGTCGAACTCAGAAACAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RHQRADNACPFP*GVSSSRTQKQK Trigger: CTTCTGTTTCTGAGTTCGACTGCTGGAGACACCCCATGGAAATGGACATGCATTGTCTGCCCTTTGGTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR TCA 72 bp | TTCAGTGCCTGTATCCCTCTCTACTCGTTCCCTCGGTaGCCTTATGAGTCATCTGCAGAGTTACTACTCCAT | + |
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Preference number: 3 (lower is better) Translates to: FSACIPLYSFPR*PYESSAELLLH Trigger: ATGGAGTAGTAACTCTGCAGATGACTCATAAGGTCACCGAGGGAACGAGTAGAGAGGGATACAGGCACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR GCA 72 bp | ATAAGTGAAATAAGCGAGACACCAAAGGGCAGACAATaGATGTCCATTTCCATGGGGTGTCTCCAGCAGTCG | + |
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Preference number: 3 (lower is better) Translates to: ISEISETPKGRQ*MSISMGCLQQS Trigger: CGACTGCTGGAGACACCCCATGGAAATGGACATGCATTGTCTGCCCTTTGGTGTCTCGCTTATTTCACTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR-3UTR CAA 90 bp | AGCATACTCTGTGGTGTGTGGCTTAAGTGTAGGGGATCAGAGAAAGGGAACGGAGCGATCTCTTTGGTCTaGATTAATCTGTGTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: SILCGVWLKCRGSEKGNGAISLV*INLCPG Trigger: ACCAGGACACAGATTAATCAAGACCAAAGAGATCGC...TCCGTTCCCTTTCTCTGATCCCCTACACTTAAGCCACACACCACAGAGTATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR GCA 72 bp | AACACACTCAAGTCCTTGTATGGTGCCTTAATCACATaGAGATTCAGCATCCCTTATCTCCTGCCCCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: NTLKSLYGALIT*RFSIPYLLPHF Trigger: GAAATGGGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGACTTGAGTGTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR GCA 72 bp | GTTCCAGAATTCCATGTGAGACATCAAAATCAGCTCTaGAGTGCCTTCCTTTTCAGTGAAGCTCAGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VPEFHVRHQNQL*SAFLFSEAQSL Trigger: GAGAGACTGAGCTTCACTGAAAAGGAAGGCACTGCAGAGCTGATTTTGATGTCTCACATGGAATTCTGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR TCA 72 bp | ACATGGTTTGCAATATTGAACTGTGTGCCCAAGCATTaGAGATGGTGGCTCTCATGTCTTCTTACCACAAGA | + |
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Preference number: 3 (lower is better) Translates to: TWFAILNCVPKH*RWWLSCLLTTR Trigger: TCTTGTGGTAAGAAGACATGAGAGCCACCATCTTCAATGCTTGGGCACACAGTTCAATATTGCAAACCATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR GCA 72 bp | GTCCTAGAGATACGCCACAATATTGTGTACATGGTTTaGAATATTGAACTGTGTGCCCAAGCATTGAAGATG | + |
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Preference number: 3 (lower is better) Translates to: VLEIRHNIVYMV*NIELCAQALKM Trigger: CATCTTCAATGCTTGGGCACACAGTTCAATATTGCAAACCATGTACACAATATTGTGGCGTATCTCTAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR TCA 72 bp | ATTCAGAAGGAACAAATCCTGCCACGTGTGACCATGTaGAGGAACCCAGAGAATATTGTCATAAGTGAAATA | + |
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Preference number: 3 (lower is better) Translates to: IQKEQILPRVTM*RNPENIVISEI Trigger: TATTTCACTTATGACAATATTCTCTGGGTTCCTTCACATGGTCACACGTGGCAGGATTTGTTCCTTCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR CCA 90 bp | ATCCCTTATCTCCTGCCCCATTTCCCTCTTCCATCGTCCCAAGCAGTCACAGGATCATCAATCACAATCTaGTCCTCTTCTGAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: IPYLLPHFPLPSSQAVTGSSITI*SSSECS Trigger: GGAACACTCAGAAGAGGACCAGATTGTGATTGATGA...TCCTGTGACTGCTTGGGACGATGGAAGAGGGAAATGGGGCAGGAGATAAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| CDS-3UTR TCA 90 bp | TCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCCTCGAGAAAGAAGGGCTaGACTTCATCTCCAAGTATC | + |
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Preference number: 4 (lower is better) Translates to: SLYGALITCRFSIPYLLPSRKKG*TSSPSI Trigger: GATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCGA...GGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR TCA 90 bp | AGCATACTCTGTGGTGTGTGGCTTAAGTGTAGGGGATCAGAGAAAGGGAACGGATTTGCTCATGGCAGTTaGCAAACTTATCCAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: SILCGVWLKCRGSEKGNGFAHGS*QTYPRL Trigger: AAGTCTTGGATAAGTTTGTCAACTGCCATGAGCAAA...TCCGTTCCCTTTCTCTGATCCCCTACACTTAAGCCACACACCACAGAGTATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR TCA 90 bp | GCAGTCACAGGACATGGCCATGGGACAGAAGAGAAAGCGATCTCTTTGGTCTTGTGTTCCGATGAAGTGTaGAGAAAGATGGATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: AVTGHGHGTEEKAISLVLCSDEV*RKMDVF Trigger: AAATACATCCATCTTTCTTCACACTTCATCGGAACA...CAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAATAAGCGAGACACCAAAGGGCAGACAATGCATGTCCATTTCCATGGGGGAACCCACTCTCTTTTaGTTAGATAGCTCTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: SEISETPKGRQCMSISMGEPTLF*LDSSWM Trigger: CATCCAAGAGCTATCTAAGCAAAAGAGAGTGGGTTC...CCCCATGGAAATGGACATGCATTGTCTGCCCTTTGGTGTCTCGCTTATTTCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR CCA 90 bp | AGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACCTGACTTCATCAATCACAATCTaGTCCTCTTCTGAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RRAELHLQVYSGLGRHLTSSITI*SSSECS Trigger: GGAACACTCAGAAGAGGACCAGATTGTGATTGATGA...AGTCAGGTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CCA 90 bp | TCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCCAGAAGGATCATAAGATaGAACGCTGGTGCTTATATC | + |
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Preference number: 4 (lower is better) Translates to: SLYGALITCRFSIPYLLPRRIIR*NAGAYI Trigger: GATATAAGCACCAGCGTTCCATCTTATGATCCTTCT...GGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| 3UTR CAA 72 bp | GGACATGGCCATGGGACAGAAGAGAAAGCGATCTCTTaGGTCTTGATTAATCTGTGTCCTGGTGATAAACAA | + |
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Preference number: 4 (lower is better) Translates to: GHGHGTEEKAIS*VLINLCPGDKQ Trigger: TTGTTTATCACCAGGACACAGATTAATCAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| CDS-3UTR TCA 90 bp | CGAGAAAGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACTTTGCTCATGGCAGTTaGCAAACTTATCCAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: RERRAELHLQVYSGLGRHFAHGS*QTYPRL Trigger: AAGTCTTGGATAAGTTTGTCAACTGCCATGAGCAAA...GTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CCA 90 bp | CATGGCCATGGGACAGAAGAGAAAGCGATCTCTTTGGTCTTGATTAATCTGTGTTCATCAATCACAATCTaGTCCTCTTCTGAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: HGHGTEEKAISLVLINLCSSITI*SSSECS Trigger: GGAACACTCAGAAGAGGACCAGATTGTGATTGATGA...ACACAGATTAATCAAGACCAAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| 3UTR CAA 72 bp | TACATGGTTTGCAATATTGAACTGTGTGCCCAAGCATaGAAGATGGTGGCTCTCATGTCTTCTTACCACAAG | + |
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Preference number: 4 (lower is better) Translates to: YMVCNIELCAQA*KMVALMSSYHK Trigger: CTTGTGGTAAGAAGACATGAGAGCCACCATCTTCAATGCTTGGGCACACAGTTCAATATTGCAAACCATGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR TCA 90 bp | CGAGAAAGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACTGTTCCGATGAAGTGTaGAGAAAGATGGATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: RERRAELHLQVYSGLGRHCSDEV*RKMDVF Trigger: AAATACATCCATCTTTCTTCACACTTCATCGGAACA...GTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CCA 90 bp | CATCGAGAAAGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGAAGAAGGATCATAAGATaGAACGCTGGTGCTTATATC | + |
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Preference number: 4 (lower is better) Translates to: HRERRAELHLQVYSGLGRRRIIR*NAGAYI Trigger: GATATAAGCACCAGCGTTCCATCTTATGATCCTTCT...TCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR GCA 90 bp | AGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACCTGACTGTATTAAATAAAGCTTaGTTCAGCTCTTCGGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RRAELHLQVYSGLGRHLTVLNKA*FSSSVC Trigger: ACAAACCGAAGAGCTGAAGCAAGCTTTATTTAATAC...AGTCAGGTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR TCA 90 bp | CGCCACAATATTGTGTACATGGTTTGCAATATTGAACTGTGTGCCCAAGCATTGTGTTCCGATGAAGTGTaGAGAAAGATGGATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: RHNIVYMVCNIELCAQALCSDEV*RKMDVF Trigger: AAATACATCCATCTTTCTTCACACTTCATCGGAACA...CAATGCTTGGGCACACAGTTCAATATTGCAAACCATGTACACAATATTGTGGCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR TCA 90 bp | CTCTTTTGCTTAGATAGCTCTTGGATGGTTGCTATCTCTCCAGCAGTAAACTTACACATTATCCTCTTTTaGAAGATGAGTGAAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LFCLDSSWMVAISPAVNLHIILF*KMSESA Trigger: AGCACTTTCACTCATCTTTCAAAAGAGGATAATGTG...TAAGTTTACTGCTGGAGAGATAGCAACCATCCAAGAGCTATCTAAGCAAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099682.9 ENSMUST00000136601.9 |
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| CDS-3UTR TCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACTCGAGAAAGAAGGGCTaGACTTCATCTCCAAGTATC | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDSRKKG*TSSPSI Trigger: GATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCGA...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 ENSMUST00000177152.2 |
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| CDS-3UTR GCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACGAACCCACTCTCTTTTaGTTAGATAGCTCTTGGATG | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDEPTLF*LDSSWM Trigger: CATCCAAGAGCTATCTAAGCAAAAGAGAGTGGGTTC...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 ENSMUST00000177152.2 |
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| CDS-3UTR CCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACTCATCAATCACAATCTaGTCCTCTTCTGAGTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDSSITI*SSSECS Trigger: GGAACACTCAGAAGAGGACCAGATTGTGATTGATGA...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACGAACTCCCAACTTTGTaGCCTTCATCAATCACAATC | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDELPTL*PSSITI Trigger: GATTGTGATTGATGAAGGCCACAAAGTTGGGAGTTC...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACTTTGCTCATGGCAGTTaGCAAACTTATCCAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDFAHGS*QTYPRL Trigger: AAGTCTTGGATAAGTTTGTCAACTGCCATGAGCAAA...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACAGAAGGATCATAAGATaGAACGCTGGTGCTTATATC | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDRRIIR*NAGAYI Trigger: GATATAAGCACCAGCGTTCCATCTTATGATCCTTCT...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 ENSMUST00000177152.2 |
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| CDS-3UTR TCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACCACATTATCCTCTTTTaGAAGATGAGTGAAAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDHIILF*KMSESA Trigger: AGCACTTTCACTCATCTTTCAAAAGAGGATAATGTG...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACTGTTCCGATGAAGTGTaGAGAAAGATGGATGTATTT | + |
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Preference number: 4 (lower is better) Translates to: CFILMSLECEQNKTKPRDCSDEV*RKMDVF Trigger: AAATACATCCATCTTTCTTCACACTTCATCGGAACA...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS TCA 90 bp | GTTTCTGAGTCCTTCCCACAGCAGGCTTTGGCCTCACCTCAGAGGTaGGCGGTAGGTCCACAGAAGGATCATAAGATGGAACGCTGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VSESFPQQALASPQR*AVGPQKDHKMERWC Trigger: GCACCAGCGTTCCATCTTATGATCCTTCTGTGGACCTACCGCTCACCTCTGAGGTGAGGCCAAAGCCTGCTGTGGGAAGGACTCAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS CCA 90 bp | TCCTGTTCCACCTCACCTGGAAGTAGCAGGCAATCCTTGTTCATCTaGGGCTTACTCTCTTCCTCCATGTCCACATCTTCTAAGTCTAGG | + |
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Preference number: 5 (lower is better) Translates to: SCSTSPGSSRQSLFI*GLLSSSMSTSSKSR Trigger: CCTAGACTTAGAAGATGTGGACATGGAGGAAGAGAGTAAGCCCCAGATGAACAAGGATTGCCTGCTACTTCCAGGTGAGGTGGAACAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000128898.3 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CAA 90 bp | ATCCCTTATCTCCTGCCCCATTTCCCTCTTCCATCGTCCCAAGCAGTCACAGGAAAGGAACTCCCAACTTaGTGGCCTTCATCAATCACA | + |
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Preference number: 5 (lower is better) Translates to: IPYLLPHFPLPSSQAVTGKELPT*WPSSIT Trigger: TGTGATTGATGAAGGCCACAAAGTTGGGAGTTCCTT...TCCTGTGACTGCTTGGGACGATGGAAGAGGGAAATGGGGCAGGAGATAAGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| CDS-3UTR CAA 90 bp | GTCCCAAGCAGTCACAGGACATGGCCATGGGACAGAAGAGAAAGCGATCTCTTTCATCTCCAAGTATCCTaGTTCATCTGGGGCTTACTC | + |
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Preference number: 5 (lower is better) Translates to: VPSSHRTWPWDRRESDLFHLQVS*FIWGLL Trigger: GAGTAAGCCCCAGATGAACAAGGATACTTGGAGATG...AAAGAGATCGCTTTCTCTTCTGTCCCATGGCCATGTCCTGTGACTGCTTGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136601.9 |
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| CDS TCA 90 bp | AGGAAGTTGTCTACCTTCACCTTTCCAGCCCGGGTCATATCACCTTaGAAGGAACTCCCAACTTTGTGGCCTTCATCAATCACAATCTGG | + |
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Preference number: 5 (lower is better) Translates to: RKLSTFTFPARVISP*KELPTLWPSSITIW Trigger: CCAGATTGTGATTGATGAAGGCCACAAAGTTGGGAGTTCCTTTCAAGGTGATATGACCCGGGCTGGAAAGGTGAAGGTAGACAACTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000128898.3 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACCTGACTCCATGTGCTCCCCATTaGGCCACATTATCCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: RRAELHLQVYSGLGRHLTPCAPH*ATLSSF Trigger: AAAAGAGGATAATGTGGCCAAATGGGGAGCACATGG...AGTCAGGTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CAA 90 bp | TCCTTGTATGGTGCCTTAATCACATGCAGATTCAGCATCCCTTATCTCCTGCCCAAGGAACTCCCAACTTaGTGGCCTTCATCAATCACA | + |
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Preference number: 5 (lower is better) Translates to: SLYGALITCRFSIPYLLPKELPT*WPSSIT Trigger: TGTGATTGATGAAGGCCACAAAGTTGGGAGTTCCTT...GGGCAGGAGATAAGGGATGCTGAATCTGCATGTGATTAAGGCACCATACAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111231.10 ENSMUST00000136601.9 |
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| CDS-3UTR CAA 90 bp | CGAGAAAGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACAAGGAACTCCCAACTTaGTGGCCTTCATCAATCACA | + |
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Preference number: 5 (lower is better) Translates to: RERRAELHLQVYSGLGRHKELPT*WPSSIT Trigger: TGTGATTGATGAAGGCCACAAAGTTGGGAGTTCCTT...GTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCTTTCTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CAA 90 bp | TCAGCACAACACACTCAAGTCCTTGTATGGTGCCTTAATCACATGCAGATTCAGAAGTATCTCTTCGGTTaGTTTCTGAGTCCTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SAQHTQVLVWCLNHMQIQKYLFG*FLSPSH Trigger: GTGGGAAGGACTCAGAAACAAACCGAAGAGATACTT...CTGAATCTGCATGTGATTAAGGCACCATACAAGGACTTGAGTGTGTTGTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR CAA 90 bp | AGTGAAATAAGCGAGACACCAAAGGGCAGACAATGCATGTCCATTTCCATGGGGAAATTCTTCATAGGTTaGCTCATGGCAGTTGACAAA | + |
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Preference number: 5 (lower is better) Translates to: SEISETPKGRQCMSISMGKFFIG*LMAVDK Trigger: TTTGTCAACTGCCATGAGCAAACCTATGAAGAATTT...CCCCATGGAAATGGACATGCATTGTCTGCCCTTTGGTGTCTCGCTTATTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111231.10 |
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| CDS-3UTR CAA 90 bp | AGAAGGGCTGAACTTCATCTCCAAGTATATTCTGGCCTTGGTAGACACCTGACTAAATTCTTCATAGGTTaGCTCATGGCAGTTGACAAA | + |
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Preference number: 5 (lower is better) Translates to: RRAELHLQVYSGLGRHLTKFFIG*LMAVDK Trigger: TTTGTCAACTGCCATGAGCAAACCTATGAAGAATTT...AGTCAGGTGTCTACCAAGGCCAGAATATACTTGGAGATGAAGTTCAGCCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACCCATGTGCTCCCCATTaGGCCACATTATCCTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: CFILMSLECEQNKTKPRDPCAPH*ATLSSF Trigger: AAAAGAGGATAATGTGGCCAAATGGGGAGCACATGG...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACAAGGAACTCCCAACTTaGTGGCCTTCATCAATCACA | + |
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Preference number: 5 (lower is better) Translates to: CFILMSLECEQNKTKPRDKELPT*WPSSIT Trigger: TGTGATTGATGAAGGCCACAAAGTTGGGAGTTCCTT...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACAAGTATCTCTTCGGTTaGTTTCTGAGTCCTTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: CFILMSLECEQNKTKPRDKYLFG*FLSPSH Trigger: GTGGGAAGGACTCAGAAACAAACCGAAGAGATACTT...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS-3UTR CAA 90 bp | TGCTTTATTCTAATGTCGCTTGAGTGTGAACAAAATAAAACTAAACCCAGAGACAAATTCTTCATAGGTTaGCTCATGGCAGTTGACAAA | + |
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Preference number: 5 (lower is better) Translates to: CFILMSLECEQNKTKPRDKFFIG*LMAVDK Trigger: TTTGTCAACTGCCATGAGCAAACCTATGAAGAATTT...GTCTCTGGGTTTAGTTTTATTTTGTTCACACTCAAGCGACATTAGAATAAAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090513.11 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS TCA 72 bp | TCCTTCCCACAGCAGGCTTTGGCCTCACCTCAGAGGTaGGCGGTAGGTCCACAGAAGGATCATAAGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: SFPQQALASPQR*AVGPQKDHKME Trigger: TTCCATCTTATGATCCTTCTGTGGACCTACCGCTCACCTCTGAGGTGAGGCCAAAGCCTGCTGTGGGAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS CCA 72 bp | ACCTCACCTGGAAGTAGCAGGCAATCCTTGTTCATCTaGGGCTTACTCTCTTCCTCCATGTCCACATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TSPGSSRQSLFI*GLLSSSMSTSS Trigger: AGAAGATGTGGACATGGAGGAAGAGAGTAAGCCCCAGATGAACAAGGATTGCCTGCTACTTCCAGGTGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000128898.3 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS TCA 72 bp | TCTACCTTCACCTTTCCAGCCCGGGTCATATCACCTTaGAAGGAACTCCCAACTTTGTGGCCTTCATCAATC | + |
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Preference number: 6 (lower is better) Translates to: STFTFPARVISP*KELPTLWPSSI Trigger: GATTGATGAAGGCCACAAAGTTGGGAGTTCCTTTCAAGGTGATATGACCCGGGCTGGAAAGGTGAAGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000128898.3 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS CAA 72 bp | GTCTACCTTCACCTTTCCAGCCCGGGTCATATCACCTaGAAAGGAACTCCCAACTTTGTGGCCTTCATCAAT | + |
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Preference number: 6 (lower is better) Translates to: VYLHLSSPGHIT*KGTPNFVAFIN Trigger: ATTGATGAAGGCCACAAAGTTGGGAGTTCCTTTCAAGGTGATATGACCCGGGCTGGAAAGGTGAAGGTAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000090513.11 ENSMUST00000099682.9 ENSMUST00000111231.10 ENSMUST00000128898.3 ENSMUST00000136601.9 ENSMUST00000160037.8 ENSMUST00000160722.8 |
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| CDS TCA 72 bp | TTAAATAAAGCTTGCTTCAGCTCTTCGGTTTGTTTCTaGGTCCTTCCCACAGCAGGCTTTGGCCTCACCTCA | + |
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Preference number: 6 (lower is better) Translates to: LNKACFSSSVCF*VLPTAGFGLTS Trigger: TGAGGTGAGGCCAAAGCCTGCTGTGGGAAGGACTCAGAAACAAACCGAAGAGCTGAAGCAAGCTTTATTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099682.9 |
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| CDS TCA 72 bp | AGAAGGGCTGAACTTCATCTCCAAGTATCTCAGAGGTaGGCGGTAGGTCCACAGAAGGATCATAAGATGGAA | + |
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Preference number: 6 (lower is better) Translates to: RRAELHLQVSQR*AVGPQKDHKME Trigger: TTCCATCTTATGATCCTTCTGTGGACCTACCGCTCACCTCTGAGATACTTGGAGATGAAGTTCAGCCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177152.2 |
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