Pregenerated sensors for IFT88 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040040Ensembl transcript IDs: ENSMUST00000122063.8, ENSMUST00000150296.8, ENSMUST00000171682.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGCCAGCTGCTCTCACTGCTGTCATCGGTCGAGCAACTCCATCCTaGATTGTCCCTGTCATCGGTCTTCCCATTGATGATGTCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: KPAALTAVIGRATPS*IVPVIGLPIDDVRD Trigger: ATCCCTGACATCATCAATGGGAAGACCGATGACAGGGACAATTCAGGATGGAGTTGCTCGACCGATGACAGCAGTGAGAGCAGCTGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR TCA 90 bp | TGGCAAGTTCCAGGCCAGAGGAACCCTGCCACAAATGTAAAAAGGTaGTGGATGGTGCCTGAGGAACATCTGAGGCTGTTTTCTGACACA | + |
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Preference number: 1 (lower is better) Translates to: WQVPGQRNPATNVKR*WMVPEEHLRLFSDT Trigger: TGTGTCAGAAAACAGCCTCAGATGTTCCTCAGGCACCATCCATCACCTTTTTACATTTGTGGCAGGGTTCCTCTGGCCTGGAACTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR GCA 90 bp | CAGGGATGTCTTGGACCCATATCCAGTAGCTATGGGTCTGCTGACTaGTGTGCTTGGTATTTTAGCAGTTACCTTGGGGAGGAAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: QGCLGPISSSYGSAD*CAWYFSSYLGEERE Trigger: CTCTCTTTCCTCCCCAAGGTAACTGCTAAAATACCAAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAGACATCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR CCA 90 bp | TGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTaGTCGCAGCTGCACTCTTCACTCTACTGTCCTTCTTCTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: WLGQIRFPDNTGTRG*SQLHSSLYCPSSQT Trigger: TGTTTGAGAAGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| 3UTR GCA 90 bp | CTGACGGGTTATATCTATCCGAGTTCACAGCTAAATCTGCATAGCTaGTGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGA | + |
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Preference number: 1 (lower is better) Translates to: LTGYIYPSSQLNLHS*WLGQIRFPDNTGTR Trigger: TCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCAGCAGCTATGCAGATTTAGCTGTGAACTCGGATAGATATAACCCGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| 3UTR CAA 90 bp | GGGAGCAGAGACAAGCAGACCCATGGGGTGGCCAGCCAGCCAGTCTaGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCTGCCACAAAT | + |
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Preference number: 2 (lower is better) Translates to: GSRDKQTHGVASQPV*PIWQVPGQRNPATN Trigger: ATTTGTGGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTGCTTGTCTCTGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR-3UTR CCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGAGACAAGCAGACCCATaGGGTGGCCAGCCAGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: ARESTIGKVLALQAGGPERQADP*GGQPAS Trigger: ACTGGCTGGCTGGCCACCCCATGGGTCTGCTTGTCT...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR-3UTR TCA 90 bp | CAGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCACAAATGTAAAAAGGTaGTGGATGGTGCCTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QTHGVASQPVLPIWQVPGTNVKR*WMVPEE Trigger: TTCCTCAGGCACCATCCATCACCTTTTTACATTTGT...GCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR CAA 90 bp | CAGCTGCTCTCACTGCTGTCATCGGTCGAGCAACTCCATCCTGAATaGTCCCTGTCATCGGTCTTCCCATTGATGATGTCAGGGATGTCT | + |
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Preference number: 2 (lower is better) Translates to: QLLSLLSSVEQLHPE*SLSSVFPLMMSGMS Trigger: AGACATCCCTGACATCATCAATGGGAAGACCGATGACAGGGACAATTCAGGATGGAGTTGCTCGACCGATGACAGCAGTGAGAGCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR CAA 90 bp | ATTGTCCCTGTCATCGGTCTTCCCATTGATGATGTCAGGGATGTCTaGGACCCATATCCAGTAGCTATGGGTCTGCTGACTGCTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: IVPVIGLPIDDVRDV*DPYPVAMGLLTAVL Trigger: AAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAGACATCCCTGACATCATCAATGGGAAGACCGATGACAGGGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGTCTGAGGCTGTTTTCTaGCACACACACACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: ARESTIGKVLALQAGGPESEAVF*HTHTHR Trigger: TCTGTGTGTGTGTGTGTGTCAGAAAACAGCCTCAGA...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR-3UTR GCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGAGGCCAGAGGAACCCTaGCACAAATGTAAAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ARESTIGKVLALQAGGPERPEEP*HKCKKV Trigger: CACCTTTTTACATTTGTGGCAGGGTTCCTCTGGCCT...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR GCA 72 bp | ACAAGCAGACCCATGGGGTGGCCAGCCAGCCAGTCTTaGCTATATGGCAAGTTCCAGGCCAGAGGAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: TSRPMGWPASQS*LYGKFQARGTL Trigger: CAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTGCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR CCA 72 bp | ACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATaGCAAGTTCCAGGCCAGAGGAACCCTGCCACAAAT | + |
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Preference number: 3 (lower is better) Translates to: THGVASQPVLPI*QVPGQRNPATN Trigger: ATTTGTGGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR GCA 72 bp | TGCAGAGCCTCGCAAAGCTGCCTTGGAAAAGCCAGCTaGTCTCACTGCTGTCATCGGTCGAGCAACTCCATC | + |
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Preference number: 3 (lower is better) Translates to: CRASQSCLGKAS*SHCCHRSSNSI Trigger: GATGGAGTTGCTCGACCGATGACAGCAGTGAGAGCAGCTGGCTTTTCCAAGGCAGCTTTGCGAGGCTCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR TCA 72 bp | CCAGGCCAGAGGAACCCTGCCACAAATGTAAAAAGGTaGTGGATGGTGCCTGAGGAACATCTGAGGCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: PGQRNPATNVKR*WMVPEEHLRLF Trigger: AAACAGCCTCAGATGTTCCTCAGGCACCATCCATCACCTTTTTACATTTGTGGCAGGGTTCCTCTGGCCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR TCA 72 bp | GCTCTCACTGCTGTCATCGGTCGAGCAACTCCATCCTaGATTGTCCCTGTCATCGGTCTTCCCATTGATGAT | + |
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Preference number: 3 (lower is better) Translates to: ALTAVIGRATPS*IVPVIGLPIDD Trigger: ATCATCAATGGGAAGACCGATGACAGGGACAATTCAGGATGGAGTTGCTCGACCGATGACAGCAGTGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR GCA 72 bp | TGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTaGAAGCTGGAGGACCTGAGTTCAAGCCCTAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: WLERAQLEKCLP*KLEDLSSSPRV Trigger: GACTCTAGGGCTTGAACTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR GCA 72 bp | CTTGGACCCATATCCAGTAGCTATGGGTCTGCTGACTaGTGTGCTTGGTATTTTAGCAGTTACCTTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: LGPISSSYGSAD*CAWYFSSYLGE Trigger: CTCCCCAAGGTAACTGCTAAAATACCAAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| 3UTR GCA 72 bp | TTCCAGATAATACAGGAACGAGAGGTTGGTCGCAGCTaGACTCTTCACTCTACTGTCCTTCTTCTCAAACAT | + |
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Preference number: 3 (lower is better) Translates to: FQIIQEREVGRS*TLHSTVLLLKH Trigger: ATGTTTGAGAAGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| 3UTR CCA 72 bp | CAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTaGTCGCAGCTGCACTCTTCACTCTACTGTCCTTCT | + |
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Preference number: 3 (lower is better) Translates to: QIRFPDNTGTRG*SQLHSSLYCPS Trigger: AGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| 3UTR GCA 72 bp | TATATCTATCCGAGTTCACAGCTAAATCTGCATAGCTaGTGGCTTGGGCAAATTCGTTTTCCAGATAATACA | + |
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Preference number: 3 (lower is better) Translates to: YIYPSSQLNLHS*WLGQIRFPDNT Trigger: TGTATTATCTGGAAAACGAATTTGCCCAAGCCAGCAGCTATGCAGATTTAGCTGTGAACTCGGATAGATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| CDS-3UTR CCA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGAGGAGCAGGGCCCCTaGACTGACCAAGGGGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: PMGWPASQSCLYGKFQAREEQGP*TDQGGQ Trigger: TTGACCCCCTTGGTCAGTCCAGGGGCCCTGCTCCTC...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGCCAGCTGCTCTCACTaGTGTCATCGGTCGAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: PMGWPASQSCLYGKFQARASCSH*CHRSSN Trigger: GTTGCTCGACCGATGACAGCAGTGAGAGCAGCTGGC...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCGATGAGGTTGAAGCCTaGCTTCAGGCTCGGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQADEVEA*LQARGH Trigger: ATGGCCCCGAGCCTGAAGGCAGGCTTCAACCTCATC...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR CAA 72 bp | GACAAGCAGACCCATGGGGTGGCCAGCCAGCCAGTCTaGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: DKQTHGVASQPV*PIWQVPGQRNP Trigger: AGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTGCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGCCTCGCAAAGCTaGCTTGGAAAAGCCAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQARASQS*LGKASC Trigger: GCAGCTGGCTTTTCCAAGGCAGCTTTGCGAGGCTCT...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | GCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCTGCCCGAGCAACTCCATCCTaGATTGTCCCTGTCATCGGT | + |
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Preference number: 4 (lower is better) Translates to: ASQPVLPIWQVPGQRNPARATPS*IVPVIG Trigger: ACCGATGACAGGGACAATTCAGGATGGAGTTGCTCG...GGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCGAGGTTGGTCGCAGCTaGACTCTTCACTCTACTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQAEVGRS*TLHSTV Trigger: GACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTC...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | GAGCAGGGCCCCTGGACTGACCAAGGGGGTCAAATGCAGAGCCTCGCAAAGCTGCATAGGGAGGTCTTCTaGCATGACTGGTTCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: EQGPWTDQGGQMQSLAKLHREVF*HDWFSL Trigger: CAGTGAGAACCAGTCATGGCAGAAGACCTCCCTATG...CAGCTTTGCGAGGCTCTGCATTTGACCCCCTTGGTCAGTCCAGGGGCCCTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGACTGGCACTATTGTTCTaGCCACTGTCACTGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGLALLF*PLSLPA Trigger: TGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAG...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGACTGGGTTGTAGTCGTTaGAACCAGAGTAAAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGLGCSR*NQSKGR Trigger: ACGACCTTTACTCTGGTTTCAACGACTACAACCCAG...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGCTCTTTCAAAGTACTaGATGGCTTTCTCGCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PMGWPASQSCLYGKFQARALSKY*MAFSQN Trigger: GTTCTGCGAGAAAGCCATTCAGTACTTTGAAAGAGC...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCCTAAATCTGCATAGCTaGTGGCTTGGGCAAATTCGT | + |
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Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQALNLHS*WLGQIR Trigger: ACGAATTTGCCCAAGCCAGCAGCTATGCAGATTTAG...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGACTCTGCCCGATTTTATaGGCTGTTCCCTCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PMGWPASQSCLYGKFQARLCPIL*AVPSFL Trigger: AAGAAATGAGGGAACAGCGCATAAAATCGGGCAGAG...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CCA 90 bp | CAGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCGACTGTCTTCATTTTTaGCTTCCAAAGGAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QTHGVASQPVLPIWQVPGDCLHF*LPKEEQ Trigger: CTGCTCCTCCTTTGGAAGCCAAAAATGAAGACAGTC...GCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCGTTCACTCTTACTACTaGCACTATTGTTCTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQAVHSYY*HYCSGH Trigger: GTGGCCAGAACAATAGTGCCAGTAGTAAGAGTGAAC...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGACTTGGCTGCAGTTTTTaGTCTTTCTATCTGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGLGCSF*SFYLRA Trigger: GGCCCTCAGATAGAAAGACCAAAAACTGCAGCCAAG...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGGGAGGTCTTCTGCCATaGCTGGTTCTCACTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPEGGLLP*LVLTAC Trigger: GCAAGCAGTGAGAACCAGTCATGGCAGAAGACCTCC...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | GATGTCAGGGATGTCTTGGACCCATATCCAGTAGCTATGGGTCTGCTGACTGCTGGAGGTCTTCTGCCATaGCTGGTTCTCACTGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: DVRDVLDPYPVAMGLLTAGGLLP*LVLTAC Trigger: GCAAGCAGTGAGAACCAGTCATGGCAGAAGACCTCC...AGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAGACATCCCTGACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| CDS-3UTR TCA 90 bp | CAGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCGTTTTGCAGCTGTCATaGTGTATTTTTCTGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: QTHGVASQPVLPIWQVPGVLQLS*CIFLPW Trigger: CCATGGCAGAAAAATACATCATGACAGCTGCAAAAC...GCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR TCA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGATCAGCTTCTTATAGGTaGGGCCAATGTTATACAGTG | + |
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Preference number: 4 (lower is better) Translates to: PMGWPASQSCLYGKFQARSASYR*GQCYTV Trigger: CACTGTATAACATTGGCCTCACCTATAAGAAGCTGA...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR GCA 90 bp | AACGAGAGGTTGGTCGCAGCTGCACTCTTCACTCTACTGTCCTTCTTCTCAAACGATGAGGTTGAAGCCTaGCTTCAGGCTCGGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: NERLVAAALFTLLSFFSNDEVEA*LQARGH Trigger: ATGGCCCCGAGCCTGAAGGCAGGCTTCAACCTCATC...GTTTGAGAAGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| CDS-3UTR GCA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGTGCGAGAACCCCCGCTaGTGTCTCTGCCCGATTTTA | + |
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Preference number: 4 (lower is better) Translates to: LDVVASAYKSLQPGSRDKCENPR*CLCPIL Trigger: TAAAATCGGGCAGAGACAGCAGCGGGGGTTCTCGCA...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGTATCTGAGGGCCCAGTaGATCCACGTAGGAGGCATC | + |
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Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPEYLRAQ*IHVGGI Trigger: GATGCCTCCTACGTGGATCCACTGGGCCCTCAGATA...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| 3UTR CAA 72 bp | CTGCTGACTGCTGTGCTTGGTATTTTAGCAGTTACCTaGGGGAGGAAAGAGAGCATCCTCAGCAGGCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLTAVLGILAVT*GRKESILSRPQ Trigger: CTGAGGCCTGCTGAGGATGCTCTCTTTCCTCCCCAAGGTAACTGCTAAAATACCAAGCACAGCAGTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| CDS-3UTR TCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGATATTTTCTGGACTTGTaGCTTGCTCTCGTTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGYFLDL*LALVVS Trigger: TGAGACAACGAGAGCAAGTCACAAGTCCAGAAAATA...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR TCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCTTTATTAGTGAGAGCTaGCGGGTTATATCTATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQAFISES*RVISIR Trigger: TCGGATAGATATAACCCGTCAGCTCTCACTAATAAA...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGCTTGGAAAAGCCAGCTaGTCTCACTGCTGTCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPELGKAS*SHCCHR Trigger: CCGATGACAGCAGTGAGAGCAGCTGGCTTTTCCAAG...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAGCCAATGTTATACAGTaGTTCAGTACAGGAAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGANVIQ*FSTGRV Trigger: GACTCTTCCTGTACTGAAGCACTGTATAACATTGGC...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAAGTTTAGACAGAGCTTaGGAATCAGTTGGAACAACG | + |
|
Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGSLDRA*ESVGTT Trigger: CGTTGTTCCAACTGATTCCCAAGCTCTGTCTAAACT...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGACTCATCTGTTTCTGGTaGCAGATGAACATTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGLICFW*QMNIFH Trigger: ATGGAAAATGTTCATCTGGCACCAGAAACAGATGAG...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGTTACGGGAGGTCTTCTaGCATGACTGGTTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LDVVASAYKSLQPGSRDKLREVF*HDWFSL Trigger: CAGTGAGAACCAGTCATGGCAGAAGACCTCCCGTAA...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGTCTGGACTTGTGACTTaGTCTCGTTGTCTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LDVVASAYKSLQPGSRDKSGLVT*SRCLTR Trigger: CCTGGTGAGACAACGAGAGCAAGTCACAAGTCCAGA...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCTGCCTGTGTTCAGTGCTTCTaGATACATTTCATTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQPVLPIWQVPGQRNPACVQCF*IHFISR Trigger: TCTGCTAATGAAATGTATGCAGAAGCACTGAACACA...GGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCCACTTTCAGTCTTCCTaGATTGCTAAACATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQAHFQSS*IAKHLV Trigger: AACAAGATGTTTAGCAATGCAGGAAGACTGAAAGTG...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGATGTATTTTTCTGCCATaGCTTTCCTTTCACGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MGWPASQSCLYGKFQARGCIFLP*LSFHVP Trigger: TGGAACGTGAAAGGAAAGCCATGGCAGAAAAATACA...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | CAGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCAATGTGTCTACAGCTTaGTTAAAGTCCTTTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTHGVASQPVLPIWQVPGNVSTA*LKSFCL Trigger: GAGACAAAAGGACTTTAACCAAGCTGTAGACACATT...GCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCTGCCTCTCAAGTAAGTAATTaGTTTGTTAATCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ASQPVLPIWQVPGQRNPASQVSN*FVNLQV Trigger: GACCTGGAGATTAACAAAGCAATTACTTACTTGAGA...GGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCTTTATAGAACTCAGCTaGCTTCTCATAATCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: RPMGWPASQSCLYGKFQAFIELS*LLIITI Trigger: AATGGTGATTATGAGAAGGCAGCTGAGTTCTATAAA...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| 3UTR CAA 72 bp | GTCATCGGTCTTCCCATTGATGATGTCAGGGATGTCTaGGACCCATATCCAGTAGCTATGGGTCTGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VIGLPIDDVRDV*DPYPVAMGLLT Trigger: AGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAGACATCCCTGACATCATCAATGGGAAGACCGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
||
| 3UTR CAA 72 bp | CTCCATCCTGAATTGTCCCTGTCATCGGTCTTCCCATaGATGATGTCAGGGATGTCTTGGACCCATATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHPELSLSSVFP*MMSGMSWTHIQ Trigger: CTGGATATGGGTCCAAGACATCCCTGACATCATCAATGGGAAGACCGATGACAGGGACAATTCAGGATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
||
| 3UTR CAA 72 bp | TCACTGCTGTCATCGGTCGAGCAACTCCATCCTGAATaGTCCCTGTCATCGGTCTTCCCATTGATGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLSSVEQLHPE*SLSSVFPLMMS Trigger: TGACATCATCAATGGGAAGACCGATGACAGGGACAATTCAGGATGGAGTTGCTCGACCGATGACAGCAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTGGACCCATATCCAGTAGCTATGGGTCTGCTGACTGCTGTGCTTGGTATTCTGGGTTGTAGTCGTTaGAACCAGAGTAAAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VLDPYPVAMGLLTAVLGILGCSR*NQSKGR Trigger: ACGACCTTTACTCTGGTTTCAACGACTACAACCCAG...AATACCAAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGTGTGCTCAAATGAGTTaGTGGCATCTGAGTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPECAQMS*WHLSTD Trigger: GTCAGTACTCAGATGCCATCAACTCATTTGAGCACA...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| 3UTR CAA 72 bp | CTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTaGCCTTGCAAGCTGGAGGACCTGAGTTCAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LIWLERAQLEKC*PCKLEDLSSSP Trigger: AGGGCTTGAACTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTAGCCAGCTCCACATACTaGGAGGCTTTCACTACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLASSTY*EAFTTS Trigger: GGAAGTAGTGAAAGCCTCTCAGTATGTGGAGCTGGC...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTACTCGCAAAGCTGCCTTaGAAAAGCCAGCTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLLAKLP*KSQLLS Trigger: TGAGAGCAGCTGGCTTTTCCAAGGCAGCTTTGCGAG...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGAATCTGCATAGCTGCTaGCTTGGGCAAATTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDVVASAYKSLQPGSRDKNLHSC*LGQIRF Trigger: AAAACGAATTTGCCCAAGCCAGCAGCTATGCAGATT...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGGTCGCGTTTTGCAGCTGTCATaGTGTATTTTTCTGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGKFVFQIIQEREVGRVLQLS*CIFLPW Trigger: CCATGGCAGAAAAATACATCATGACAGCTGCAAAAC...GCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGCAAGTTGATATTTTCTaGACTTGTGACTTGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPEQVDIF*TCDLLS Trigger: CGAGAGCAAGTCACAAGTCCAGAAAATATCAACTTG...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGGTCGCAGATCAGCAAGTTAGTATaGGGATCATCACTTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLGQIRFPDNTGTRGWSQISKLV*GSSLGE Trigger: CTCCCCAAGTGATGATCCCCATACTAACTTGCTGAT...CTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGATGGCATCTGAGTACTaGCCAGTTTTTATAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARESTIGKVLALQAGGPEMASEY*PVFINV Trigger: CACATTTATAAAAACTGGTCAGTACTCAGATGCCAT...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR TCA 90 bp | CATAGCTGCTGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGTGCTCAAATGAGTTaGTGGCATCTGAGTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HSCWLGQIRFPDNTGTRGCAQMS*WHLSTD Trigger: GTCAGTACTCAGATGCCATCAACTCATTTGAGCACA...ACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCAGCAGCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR GCA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGAGGAGCAATGAGTTTTaGAGCTGTCATGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LDVVASAYKSLQPGSRDKRSNEF*SCHDVF Trigger: AAATACATCATGACAGCTGCAAAACTCATTGCTCCT...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | GACCCATATCCAGTAGCTATGGGTCTGCTGACTGCTGTGCTTGGTATTTTAGCACTCATCTGTTTCTGGTaGCAGATGAACATTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DPYPVAMGLLTAVLGILALICFW*QMNIFH Trigger: ATGGAAAATGTTCATCTGGCACCAGAAACAGATGAG...TGCTAAAATACCAAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTATATGGGTCTGCTGACTaGTGTGCTTGGTATTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLYGSAD*CAWYFS Trigger: GCTAAAATACCAAGCACAGCAGTCAGCAGACCCATA...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR GCA 90 bp | ATACAGGAACGAGAGGTTGGTCGCAGCTGCACTCTTCACTCTACTGTCCTTCTTAGGAGCAATGAGTTTTaGAGCTGTCATGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQEREVGRSCTLHSTVLLRSNEF*SCHDVF Trigger: AAATACATCATGACAGCTGCAAAACTCATTGCTCCT...AAGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTCCTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR CCA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAATCAGCAAGTTAGTATaGGGATCATCACTTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TYLARESTIGKVLALQAGISKLV*GSSLGE Trigger: CTCCCCAAGTGATGATCCCCATACTAACTTGCTGAT...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCTGGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGGTTGTATTTTTCTGCCATaGCTTTCCTTTCACGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AAGLGKFVFQIIQEREVGCIFLP*LSFHVP Trigger: TGGAACGTGAAAGGAAAGCCATGGCAGAAAAATACA...ACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCCAGCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR TCA 90 bp | TTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGGTCGCAGCTGCATGGCATCTGAGTACTaGCCAGTTTTTATAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKFVFQIIQEREVGRSCMASEY*PVFINV Trigger: CACATTTATAAAAACTGGTCAGTACTCAGATGCCAT...GCAGCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
||
| CDS-3UTR GCA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAACAACGCTGATCAACTaGATCAGCCATTCAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYLARESTIGKVLALQAGTTLIN*ISHSIA Trigger: AGCTATTGAATGGCTGATGCAGTTGATCAGCGTTGT...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTAAGTCTCCACAACTGTTaGCAATACAGCTTTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLSLHNC*QYSFLP Trigger: TGGAAGAAAGCTGTATTGCCAACAGTTGTGGAGACT...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR TCA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAAGCCATTCAATAGCTTaGTTGGGATCTTCCATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TYLARESTIGKVLALQAGSHSIA*LGSSIN Trigger: GTTAATGGAAGATCCCAATCAAGCTATTGAATGGCT...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTATTTCAAAGTACTGAATaGCTTTCTCGCAGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLFQSTE*LSRRTV Trigger: CACAGTTCTGCGAGAAAGCCATTCAGTACTTTGAAA...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGACCTCGCAAAGCTGCCTaGGAAAAGCCAGCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MGWPASQSCLYGKFQARGPRKAA*EKPAAL Trigger: GAGAGCAGCTGGCTTTTCCAAGGCAGCTTTGCGAGG...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGACAACTAAGGATGAGGTaGAAGCCTGCCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PMGWPASQSCLYGKFQARQLRMR*KPAFRL Trigger: GAGCCTGAAGGCAGGCTTCAACCTCATCCTTAGTTG...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS GCA 90 bp | GTCGTTCACTCTTACTACTGGCACTATTGTTCTGGCCACTGTCACTaGCAGCACTCCCCTCTCGTTTGCTGCGAGAACCCCCGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVHSYYWHYCSGHCH*QHSPLVCCENPRCC Trigger: ACAGCAGCGGGGGTTCTCGCAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAAGAGTGAACGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGATGTGACTTGCTCTCGTaGTCTCACCAGGACTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: MGWPASQSCLYGKFQARGCDLLS*SHQDSL Trigger: GAGAGAGTCCTGGTGAGACAACGAGAGCAAGTCACA...TCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | CCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGATGCATAGCTGCTGGCTaGGGCAAATTCGTTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PMGWPASQSCLYGKFQARCIAAG*GKFVFQ Trigger: CTGGAAAACGAATTTGCCCAAGCCAGCAGCTATGCA...TCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | AGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCTCATCGGTCTTCCCATaGATGATGTCAGGGATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPMGWPASQSCLYGKFQASSVFP*MMSGMS Trigger: AGACATCCCTGACATCATCAATGGGAAGACCGATGA...GGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
||
| CDS-3UTR CAA 90 bp | CAGACCCATGGGGTGGCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCTTACTACTGGCACTATaGTTCTGGCCACTGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QTHGVASQPVLPIWQVPGLLLAL*FWPLSL Trigger: CAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAA...GCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGCCACCCCATGGGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CCA 90 bp | AGCTTGGCACTCAGTCGTTCACTCTTACTACTGGCACTATTGTTCTaGCCACTGTCACTGCCAGCACTCCCCTCTCGTTTGCTGCGAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLALSRSLLLLALLF*PLSLPALPSRLLRE Trigger: TTCTCGCAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAAGAGTGAACGACTGAGTGCCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | GCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAGGACCTGAGGGCAAAGCTCTGAGCTaGGCACTCAGTCGTTCACTC | + |
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Preference number: 5 (lower is better) Translates to: ARESTIGKVLALQAGGPEGKALS*ALSRSL Trigger: GAGTGAACGACTGAGTGCCAAGCTCAGAGCTTTGCC...CTCAGGTCCTCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | CTGGATGTGGTGGCAAGTGCTTATAAATCTCTGCAGCCAGGGAGCAGAGACAAGTTCTGGACTTGTGACTaGCTCTCGTTGTCTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LDVVASAYKSLQPGSRDKFWTCD*LSLSHQ Trigger: CTGGTGAGACAACGAGAGCAAGTCACAAGTCCAGAA...CTTGTCTCTGCTCCCTGGCTGCAGAGATTTATAAGCACTTGCCACCACATCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | GCCAGCCAGCCAGTCTTGCCTATATGGCAAGTTCCAGGCCAGAGGAACCCTGCCTTCAGTCTTCCTGCATaGCTAAACATCTTGTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ASQPVLPIWQVPGQRNPAFSLPA*LNILFF Trigger: GAAAAACAAGATGTTTAGCAATGCAGGAAGACTGAA...GGCAGGGTTCCTCTGGCCTGGAACTTGCCATATAGGCAAGACTGGCTGGCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | GGCTTGGGCAAATTCGTTTTCCAGATAATACAGGAACGAGAGGTTGGTCGCAGCCAACTAAGGATGAGGTaGAAGCCTGCCTTCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GLGKFVFQIIQEREVGRSQLRMR*KPAFRL Trigger: GAGCCTGAAGGCAGGCTTCAACCTCATCCTTAGTTG...GCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAACGAATTTGCCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| CDS TCA 90 bp | TGTCATTCTCCAACTCCTCAGTATCATAGGCTGGGTTGTAGTCGTTaGAACCAGAGTAAAGGTCGTCCTCATCTGTTTCTGGTGCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: CHSPTPQYHRLGCSR*NQSKGRPHLFLVPD Trigger: ATCTGGCACCAGAAACAGATGAGGACGACCTTTACTCTGGTTTCAACGACTACAACCCAGCCTATGATACTGAGGAGTTGGAGAATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122063.8 ENSMUST00000150296.8 |
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| CDS TCA 90 bp | GGATCTTCCATTAACTCATATATGTTTGCTATCTGGCAAAGAACTTaGGCGCTGTTCCGAAGGATCGCGTGCAGTTTCAGGAAGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: GSSINSYMFAIWQRT*ALFRRIACSFRKES Trigger: GGACTCCTTCCTGAAACTGCACGCGATCCTTCGGAACAGCGCTCAAGTTCTTTGCCAGATAGCAAACATATATGAGTTAATGGAAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS TCA 90 bp | TGTTACCGCTACTTTCATAAGGTTCATCTGTCCCAGGCAAAGCTCTaGGCTTGGCACTCAGTCGTTCACTCTTACTACTGGCACTATTGT | + |
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Preference number: 5 (lower is better) Translates to: CYRYFHKVHLSQAKL*AWHSVVHSYYWHYC Trigger: ACAATAGTGCCAGTAGTAAGAGTGAACGACTGAGTGCCAAGCTCAGAGCTTTGCCTGGGACAGATGAACCTTATGAAAGTAGCGGTAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTAGATGTCAGGGATGTCTaGGACCCATATCCAGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLDVRDV*DPYPVA Trigger: AGCTACTGGATATGGGTCCAAGACATCCCTGACATC...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | GAACGAGAGGTTGGTCGCAGCTGCACTCTTCACTCTACTGTCCTTCTTCTCAAACCTTTCACGTTCCATTaGCCTAAGGTGGTCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: EREVGRSCTLHSTVLLLKPFTFH*PKVVIF Trigger: AAAAATGACCACCTTAGGCAAATGGAACGTGAAAGG...TTTGAGAAGAAGGACAGTAGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| CDS GCA 90 bp | TATTTTAGCAGTTACGGGAGGTCTTCTGCCATGACTGGTTCTCACTaGTTGCTGAAAACCCGTGTCATTCTCCAACTCCTCAGTATCATA | + |
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Preference number: 5 (lower is better) Translates to: YFSSYGRSSAMTGSH*LLKTRVILQLLSII Trigger: TATGATACTGAGGAGTTGGAGAATGACACGGGTTTTCAGCAAGCAGTGAGAACCAGTCATGGCAGAAGACCTCCCGTAACTGCTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CCA 90 bp | TCTTTTCTTGGCTGCAGTTTTTGGTCTTTCTATCTGAGGGCCCAGTaGATCCACGTAGGAGGCATCTATTTCTTTGTTACCGCTACTTTC | + |
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Preference number: 5 (lower is better) Translates to: SFLGCSFWSFYLRAQ*IHVGGIYFFVTATF Trigger: GAAAGTAGCGGTAACAAAGAAATAGATGCCTCCTACGTGGATCCACTGGGCCCTCAGATAGAAAGACCAAAAACTGCAGCCAAGAAAAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTAGGACTGTCTTCATTTTaGGCTTCCAAAGGAGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLGLSSF*ASKGGA Trigger: TGCTCCTCCTTTGGAAGCCAAAAATGAAGACAGTCC...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | GTTTTCCAGATAATACAGGAACGAGAGGTTGGTCGCAGCTGCACTCTTCACTCTTTTCTTTATGGACACTaGGGATCTGATCTAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: VFQIIQEREVGRSCTLHSFLYGH*GSDLRP Trigger: TGGCCTTAGATCAGATCCCAAGTGTCCATAAAGAAA...AGAGTGAAGAGTGCAGCTGCGACCAACCTCTCGTTCCTGTATTATCTGGAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171682.2 |
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| CDS GCA 90 bp | ATCCAGACGGTTCAGCTTCTTATAGGTGAGGCCAATGTTATACAGTaGTTCAGTACAGGAAGAGTCGTTTCTCAGGGCCTCTTTATAGAA | + |
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Preference number: 5 (lower is better) Translates to: IQTVQLLIGEANVIQ*FSTGRVVSQGLFIE Trigger: TTCTATAAAGAGGCCCTGAGAAACGACTCTTCCTGTACTGAAGCACTGTATAACATTGGCCTCACCTATAAGAAGCTGAACCGTCTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGAAAGTCTCCACAACTGTaGGCAATACAGCTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: TYLARESTIGKVLALQAGKSPQL*AIQLSS Trigger: GGAAGAAAGCTGTATTGCCAACAGTTGTGGAGACTT...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | AGTTCAAGCCCTAGAGTCCATTTAAAGAAAGCTGGATGTGGTGGCAAGTGCTTATTTCTTTATGGACACTaGGGATCTGATCTAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SSSPRVHLKKAGCGGKCLFLYGH*GSDLRP Trigger: TGGCCTTAGATCAGATCCCAAGTGTCCATAAAGAAA...TAAGCACTTGCCACCACATCCAGCTTTCTTTAAATGGACTCTAGGGCTTGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGACCTTTCACGTTCCATTaGCCTAAGGTGGTCATTTTT | + |
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Preference number: 5 (lower is better) Translates to: TYLARESTIGKVLALQAGPFTFH*PKVVIF Trigger: AAAAATGACCACCTTAGGCAAATGGAACGTGAAAGG...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 90 bp | TGTGTCTACAGCTTGGTTAAAGTCCTTTTGTCTCAAGTAAGTAATTaGTTTGTTAATCTCCAGGTCGTTGGCCAGCTCCACATACTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CVYSLVKVLLSQVSN*FVNLQVVGQLHILR Trigger: TCTCAGTATGTGGAGCTGGCCAACGACCTGGAGATTAACAAAGCAATTACTTACTTGAGACAAAAGGACTTTAACCAAGCTGTAGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS-3UTR CAA 90 bp | ACTTATTTGGCTAGAGAGAGCACAATTGGAAAAGTGCTTGCCTTGCAAGCTGGACAATGTGTCTACAGCTaGGTTAAAGTCCTTTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TYLARESTIGKVLALQAGQCVYS*VKVLLS Trigger: AGACAAAAGGACTTTAACCAAGCTGTAGACACATTG...TCCAGCTTGCAAGGCAAGCACTTTTCCAATTGTGCTCTCTCTAGCCAAATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS TCA 90 bp | TCAGTTGGAACAACGCTGATCAACTGCATCAGCCATTCAATAGCTTaGTTGGGATCTTCCATTAACTCATATATGTTTGCTATCTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SVGTTLINCISHSIA*LGSSINSYMFAIWQ Trigger: TTGCCAGATAGCAAACATATATGAGTTAATGGAAGATCCCAATCAAGCTATTGAATGGCTGATGCAGTTGATCAGCGTTGTTCCAACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 90 bp | AAACATCTTGTTTTTCACTATAACTTGGTATGTGTTCAGTGCTTCTaGATACATTTCATTAGCAGAATACTGACTGGCCAAGTTGAAAAG | + |
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Preference number: 5 (lower is better) Translates to: KHLVFHYNLVCVQCF*IHFISRILTGQVEK Trigger: CTTTTCAACTTGGCCAGTCAGTATTCTGCTAATGAAATGTATGCAGAAGCACTGAACACATACCAAGTTATAGTGAAAAACAAGATGTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 90 bp | ATTGCTAAACATCTTGTTTTTCACTATAACTTGGTATGTGTTCAGTaGTTCTGCATACATTTCATTAGCAGAATACTGACTGGCCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: IAKHLVFHYNLVCVQ*FCIHFISRILTGQV Trigger: AACTTGGCCAGTCAGTATTCTGCTAATGAAATGTATGCAGAAGCACTGAACACATACCAAGTTATAGTGAAAAACAAGATGTTTAGCAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | TCTGGCCACTGTCACTGCCAGCACTCCCCTCTCGTTTaGTGCGAGAACCCCCGCTGCTGTCTCTGCCCGATT | + |
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Preference number: 6 (lower is better) Translates to: SGHCHCQHSPLV*CENPRCCLCPI Trigger: AATCGGGCAGAGACAGCAGCGGGGGTTCTCGCAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 72 bp | TTCTGGCCACTGTCACTGCCAGCACTCCCCTCTCGTTaGCTGCGAGAACCCCCGCTGCTGTCTCTGCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: FWPLSLPALPSR*LREPPLLSLPD Trigger: ATCGGGCAGAGACAGCAGCGGGGGTTCTCGCAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | TCTTACTACTGGCACTATTGTTCTGGCCACTGTCACTaGCAGCACTCCCCTCTCGTTTGCTGCGAGAACCCC | + |
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Preference number: 6 (lower is better) Translates to: SYYWHYCSGHCH*QHSPLVCCENP Trigger: GGGGTTCTCGCAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 90 bp | GCTCTGAGCTTGGCACTCAGTCGTTCACTCTTACTACTGGCACTATaGTTCTGGCCACTGTCACTGCCAGCACTCCCCTCTCGTTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSLALSRSLLLLAL*FWPLSLPALPSRLL Trigger: CAGCAAACGAGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAAGAGTGAACGACTGAGTGCCAAGCTCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | CCTCTCGTTTGCTGCGAGAACCCCCGCTGCTGTCTCTaGCCGATTTTATGCGCTGTTCCCTCATTTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PLVCCENPRCCL*PILCAVPSFLS Trigger: TGAAAGAAATGAGGGAACAGCGCATAAAATCGGGCAGAGACAGCAGCGGGGGTTCTCGCAGCAAACGAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 72 bp | TTGGCACTCAGTCGTTCACTCTTACTACTGGCACTATaGTTCTGGCCACTGTCACTGCCAGCACTCCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LALSRSLLLLAL*FWPLSLPALPS Trigger: AGAGGGGAGTGCTGGCAGTGACAGTGGCCAGAACAATAGTGCCAGTAGTAAGAGTGAACGACTGAGTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | CTTGGACCCATATCCAGTAGCTATGGGTCTGCTGACTaGTGTGCTTGGTATTTTAGCAGTTACGGGAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGPISSSYGSAD*CAWYFSSYGRS Trigger: AGACCTCCCGTAACTGCTAAAATACCAAGCACAGCAGTCAGCAGACCCATAGCTACTGGATATGGGTCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 90 bp | TTTAGCAGTTACGGGAGGTCTTCTGCCATGACTGGTTCTCACTGCTaGCTGAAAACCCGTGTCATTCTCCAACTCCTCAGTATCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSYGRSSAMTGSHC*LKTRVILQLLSIIG Trigger: GCCTATGATACTGAGGAGTTGGAGAATGACACGGGTTTTCAGCAAGCAGTGAGAACCAGTCATGGCAGAAGACCTCCCGTAACTGCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 90 bp | TCATGCTACATAGGGAGGTCTTCTGCCATGACTGGTTCTCACTGCTaGCTGAAAACCCGTGTCATTCTCCAACTCCTCAGTATCATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SCYIGRSSAMTGSHC*LKTRVILQLLSIIG Trigger: GCCTATGATACTGAGGAGTTGGAGAATGACACGGGTTTTCAGCAAGCAGTGAGAACCAGTCATGGCAGAAGACCTCCCTATGTAGCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150296.8 |
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| CDS TCA 72 bp | CCAGGGCTTCATCCAGACGGTTCAGCTTCTTATAGGTaGGGCCAATGTTATACAGTGCTTCAGTACAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGLHPDGSASYR*GQCYTVLQYRK Trigger: CTTCCTGTACTGAAGCACTGTATAACATTGGCCTCACCTATAAGAAGCTGAACCGTCTGGATGAAGCCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CCA 72 bp | GGCTGCAGTTTTTGGTCTTTCTATCTGAGGGCCCAGTaGATCCACGTAGGAGGCATCTATTTCTTTGTTACC | + |
|
Preference number: 6 (lower is better) Translates to: GCSFWSFYLRAQ*IHVGGIYFFVT Trigger: GGTAACAAAGAAATAGATGCCTCCTACGTGGATCCACTGGGCCCTCAGATAGAAAGACCAAAAACTGCAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS TCA 72 bp | CCAACTCCTCAGTATCATAGGCTGGGTTGTAGTCGTTaGAACCAGAGTAAAGGTCGTCCTCATCTGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PTPQYHRLGCSR*NQSKGRPHLFL Trigger: CAGAAACAGATGAGGACGACCTTTACTCTGGTTTCAACGACTACAACCCAGCCTATGATACTGAGGAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122063.8 ENSMUST00000150296.8 |
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| CDS TCA 72 bp | TACTTTCATAAGGTTCATCTGTCCCAGGCAAAGCTCTaGGCTTGGCACTCAGTCGTTCACTCTTACTACTGG | + |
|
Preference number: 6 (lower is better) Translates to: YFHKVHLSQAKL*AWHSVVHSYYW Trigger: CCAGTAGTAAGAGTGAACGACTGAGTGCCAAGCTCAGAGCTTTGCCTGGGACAGATGAACCTTATGAAAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | AGCTTGGTTAAAGTCCTTTTGTCTCAAGTAAGTAATTaGTTTGTTAATCTCCAGGTCGTTGGCCAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SLVKVLLSQVSN*FVNLQVVGQLH Trigger: GTGGAGCTGGCCAACGACCTGGAGATTAACAAAGCAATTACTTACTTGAGACAAAAGGACTTTAACCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 72 bp | GCCTTCTCTAAGGCCAGTTTTAAGTCTCCACAACTGTaGGCAATACAGCTTTCTTCCACCAACTCATTTACT | + |
|
Preference number: 6 (lower is better) Translates to: AFSKASFKSPQL*AIQLSSTNSFT Trigger: AGTAAATGAGTTGGTGGAAGAAAGCTGTATTGCCAACAGTTGTGGAGACTTAAAACTGGCCTTAGAGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 90 bp | GCATCTTTTGCCTTCTCTAAGGCCAGTTTTAAGTCTCCACAACTGTaGGCAATACAGCTTTCTTCCACCAACTCATTTACTTTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASFAFSKASFKSPQL*AIQLSSTNSFTFFS Trigger: GGAGAAGAAAGTAAATGAGTTGGTGGAAGAAAGCTGTATTGCCAACAGTTGTGGAGACTTAAAACTGGCCTTAGAGAAGGCAAAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | GTTAAGTCCAAGTTGATATTTTCTGGACTTGTGACTTaGTCTCGTTGTCTCACCAGGACTCTCTCTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VKSKLIFSGLVT*SRCLTRTLSFL Trigger: AAGAAAAGAGAGAGTCCTGGTGAGACAACGAGAGCAAGTCACAAGTCCAGAAAATATCAACTTGGACTTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS TCA 72 bp | ACAACGCTGATCAACTGCATCAGCCATTCAATAGCTTaGTTGGGATCTTCCATTAACTCATATATGTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TTLINCISHSIA*LGSSINSYMFA Trigger: AGCAAACATATATGAGTTAATGGAAGATCCCAATCAAGCTATTGAATGGCTGATGCAGTTGATCAGCGTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS CAA 90 bp | CTTCTCAAACATTTTCAATGTGTCTACAGCTTGGTTAAAGTCCTTTaGTCTCAAGTAAGTAATTGCTTTGTTAATCTCCAGGTCGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKHFQCVYSLVKVL*SQVSNCFVNLQVVG Trigger: GCCAACGACCTGGAGATTAACAAAGCAATTACTTACTTGAGACAAAAGGACTTTAACCAAGCTGTAGACACATTGAAAATGTTTGAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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| CDS GCA 72 bp | GTTTTTCACTATAACTTGGTATGTGTTCAGTGCTTCTaGATACATTTCATTAGCAGAATACTGACTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: VFHYNLVCVQCF*IHFISRILTGQ Trigger: TTGGCCAGTCAGTATTCTGCTAATGAAATGTATGCAGAAGCACTGAACACATACCAAGTTATAGTGAAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122063.8 |
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