Pregenerated sensors for IFT81 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029469Ensembl transcript IDs: ENSMUST00000031426.14, ENSMUST00000127220.8, ENSMUST00000136024.2, ENSMUST00000139590.8, ENSMUST00000196452.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGTCTCCACCCTCTTCTTCAGCCGTTCAACTCTCTTCATGAGCTaGTCTTTTTCCTCCTCCATTGCGCTGATATCCCTTCTGATTTCT | + |
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Preference number: 1 (lower is better) Translates to: TVSTLFFSRSTLFMS*SFSSSIALISLLIS Trigger: AGAAATCAGAAGGGATATCAGCGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGTTGAACGGCTGAAGAAGAGGGTGGAGACCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR TCA 90 bp | ATCAGCTCTTCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTaGAGAAACTCACTTGGCACCTCCAGTTTTATTAAGAAACGAGCT | + |
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Preference number: 1 (lower is better) Translates to: ISSSYCLLVSATVSS*RNSLGTSSFIKKRA Trigger: AGCTCGTTTCTTAATAAAACTGGAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGAAGAGCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| 3UTR GCA 90 bp | TTAAGATCAACAGCTACGGCAGGCCACCGCAGGCTTTATTTACTTTaGAATCACATCACATCACAATTGCTTTTCACAACATTAACTGGT | + |
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Preference number: 1 (lower is better) Translates to: LRSTATAGHRRLYLL*NHITSQLLFTTLTG Trigger: ACCAGTTAATGTTGTGAAAAGCAATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGCTGTTGATCTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR-3UTR TCA 90 bp | GAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTACATTTCCAAGACAACTaGGAAGGGACGGCTAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: EQRLGAHESLNFTRNPVLHFQDN*EGTASL Trigger: CAGACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATG...TAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR-3UTR TCA 90 bp | CTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAATTCAGTCCTCACAGCTTaGGAAGCTACGTGGTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: LRQATAGFIYFAITSHHNSVLTA*EATWFL Trigger: TAAGAACCACGTAGCTTCTCAAGCTGTGAGGACTGA...ATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCTTCATGAGCTGGTCTTTTTCCTCCTCCATTGCGCTGATATCCCTTCTGAAGCCAGTGGAGCACTaGGTAAATCACAGGTTTACT | + |
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Preference number: 2 (lower is better) Translates to: TLFMSWSFSSSIALISLLKPVEH*VNHRFT Trigger: AGTAAACCTGTGATTTACCCAGTGCTCCACTGGCTT...CAGAAGGGATATCAGCGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR-3UTR TCA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCAAGGGACGGCTAGTCTaGAAGCAAAGGATGAATAAG | + |
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Preference number: 2 (lower is better) Translates to: LVPKRVLQVRDRLRRALPKGRLV*KQRMNK Trigger: CTTATTCATCCTTTGCTTTCAGACTAGCCGTCCCTT...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCAGCCGTTCAACTCTCTTCATGAGCTGGTCTTTTTCCTCCTCCATTGCGAGAATCCAGATGTTTTaGGCTGCTCACACTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: FFSRSTLFMSWSFSSSIARIQMF*AAHTLY Trigger: ATAAAGAGTGTGAGCAGCTCAAAACATCTGGATTCT...CGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGTTGAACGGCTGAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR CAA 90 bp | GCGCTGATATCCCTTCTGATTTCTGCTGTAGAGAATCCAGATGTTTaGAGCTGCTCACACTCTTTATGCAGAGTTTTAAAGGCTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: ALISLLISAVENPDV*SCSHSLCRVLKASI Trigger: GATGGAAGCCTTTAAAACTCTGCATAAAGAGTGTGAGCAGCTCAAAACATCTGGATTCTCTACAGCAGAAATCAGAAGGGATATCAGCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR-3UTR TCA 90 bp | GAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAAGAAGAGAAAGAAACTaGAGTGAAACTGTAGCGACT | + |
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Preference number: 2 (lower is better) Translates to: EQRLGAHESLNFTRNPVLRRERN*SETVAT Trigger: AGTCGCTACAGTTTCACTTCAGTTTCTTTCTCTTCT...TAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTCTTCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAGAAACTCTTCATACTGTTTATTaGTGTCAGCCACGGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: SALHTVYWCQPRSHLEETLHTVY*CQPRSH Trigger: ATGAGACCGTGGCTGACACCAATAAACAGTATGAAG...AGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGAAGAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| 3UTR-3UTR CCA 90 bp | TGTTTTGAGCTGCTCACACTCTTTATGCAGAGTTTTAAAGGCTTCCATCAGCTCCTTCATACTGTTTATTaGTGTCAGCCACGGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: CFELLTLFMQSFKGFHQLLHTVY*CQPRSH Trigger: ATGAGACCGTGGCTGACACCAATAAACAGTATGAAG...GAGCTGATGGAAGCCTTTAAAACTCTGCATAAAGAGTGTGAGCAGCTCAAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR CAA 90 bp | TTTAAGATCAACAGCTACGGCAGGCCACCGCAGGCTTTATTTACTTaGCAATCACATCACATCACAATTGCTTTTCACAACATTAACTGG | + |
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Preference number: 2 (lower is better) Translates to: FKINSYGRPPQALFT*QSHHITIAFHNINW Trigger: CCAGTTAATGTTGTGAAAAGCAATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGCTGTTGATCTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR CAA 90 bp | ACTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAGAAACTCACTaGGCACCTCCAGTTTTATTAAGAAACGAGCTAAATATGCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TVYWCQPRSHLEETH*APPVLLRNELNMPF Trigger: AAAGGGCATATTTAGCTCGTTTCTTAATAAAACTGGAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| 3UTR-3UTR CAA 90 bp | CGTTCAACTCTCTTCATGAGCTGGTCTTTTTCCTCCTCCATTGCGCTGATATCCAGCCACGGTCTCATCTaGAAGAAACTCACTTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RSTLFMSWSFSSSIALISSHGLI*KKLTWH Trigger: GTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCT...GGATATCAGCGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGTTGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR GCA 72 bp | TTCCTCCTCCATTGCGCTGATATCCCTTCTGATTTCTaGTGTAGAGAATCCAGATGTTTTGAGCTGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: FLLHCADIPSDF*CRESRCFELLT Trigger: TGTGAGCAGCTCAAAACATCTGGATTCTCTACAGCAGAAATCAGAAGGGATATCAGCGCAATGGAGGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| 3UTR TCA 72 bp | AAACCTCATCTGCCTTCACTTCATTTCCAAGACAACTaGGAAGGGACGGCTAGTCTGAAAGCAAAGGATGAA | + |
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Preference number: 3 (lower is better) Translates to: KPHLPSLHFQDN*EGTASLKAKDE Trigger: TTCATCCTTTGCTTTCAGACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR TCA 72 bp | TTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCTaGAAGCAAAGGATGAATAAGTCACTTCCGAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: FISKTTEKGRLV*KQRMNKSLPRR Trigger: TCTTCTCGGAAGTGACTTATTCATCCTTTGCTTTCAGACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR TCA 72 bp | TCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTaGAGAAACTCACTTGGCACCTCCAGTTTTATTAAG | + |
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Preference number: 3 (lower is better) Translates to: SYCLLVSATVSS*RNSLGTSSFIK Trigger: CTTAATAAAACTGGAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | GCTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAAAGGCTTTGCATCCGCTaGTGCGTGCCGCATGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: ATAGHRRLYLLCNHITSQRLCIR*CVPHAL Trigger: AAGAGCATGCGGCACGCAGCAGCGGATGCAAAGCCT...TTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCGAATTACCTGGCCGATaGAAGCTGGGCTTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: NLICLHFISKTTEKGRLVELPGR*KLGFAA Trigger: AGCAGCAAAGCCCAGCTTCCATCGGCCAGGTAATTC...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCAGTTCATTACTCCGCTaGAGAAGCCAGTGGAGCACT | + |
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Preference number: 4 (lower is better) Translates to: NLICLHFISKTTEKGRLVSSLLR*RSQWST Trigger: AGTGCTCCACTGGCTTCTTCAGCGGAGTAATGAACT...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCCTGTTGCCTGTACAGTaGGAGCTTGCCTTCAATTGG | + |
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Preference number: 4 (lower is better) Translates to: NLICLHFISKTTEKGRLVLLPVQ*ELAFNW Trigger: CCAATTGAAGGCAAGCTCTCACTGTACAGGCAACAG...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | GTTTATTGGTGTCAGCCACGGTCTCATCTTGAAGAAACTCACTTGGCACCTCCACTGGCATCTCCTCTCTaGTATCAACATCTTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VYWCQPRSHLEETHLAPPLASPL*YQHLGV Trigger: GACCCCAAGATGTTGATATCAGAGAGGAGATGCCAG...TGGAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS-3UTR CCA 90 bp | ACAATCTTGACACAACTATGTTCTTTAAGATCAACAGCTACGGCAGGCCACCGCTCGAGAAGGTCAGAGTaGCCCATAGCTGGCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: TILTQLCSLRSTATAGHRSRRSE*PIAGSE Trigger: TTCTGAGCCAGCTATGGGCCACTCTGACCTTCTCGA...GCGGTGGCCTGCCGTAGCTGTTGATCTTAAAGAACATAGTTGTGTCAAGATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | GCTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAACTGGCATCTCCTCTCTaGTATCAACATCTTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: ATAGHRRLYLLCNHITSQLASPL*YQHLAW Trigger: CCAAGCAAGATGTTGATATCAGAGAGGAGATGCCAG...TTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | GCTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAAATGATGGATGCCTGTTaGCTGTACAGTGAGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ATAGHRRLYLLCNHITSQMMDAC*LYSESL Trigger: CAAGCTCTCACTGTACAGGCAACAGGCATCCATCAT...TTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | CATCAGCTCTTCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAGAAAACGGAAGGTGCTCCTTaGGGTCAATCTCAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HQLFILFIGVSHGLILKKTEGAP*GQSQPG Trigger: TCCTGGCTGAGATTGACCCCAAGGAGCACCTTCCGT...TTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGAAGAGCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136024.2 |
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| CDS-3UTR TCA 90 bp | CTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAGAAACTCACTTGGCACCTCCAGCCAGGACATCATTaGGAACTTGCAATAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LFIGVSHGLILKKLTWHLQPGHH*ELAIVA Trigger: TGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTG...GAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCAATAAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS-3UTR TCA 90 bp | GCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAGCTTTCCAGCCTATGGCCACGGTCTCATCTTaGAGAAACTCACTTGGCACC | + |
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Preference number: 4 (lower is better) Translates to: AHESLNFTRNPVLAFQPMATVSS*RNSLGT Trigger: GGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGC...CATAGGCTGGAAAGCTAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | CTTCCATCAGCTCTTCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPSALHTVYWCQPRSHLEIRLAV*SGISSL Trigger: CAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAAT...TTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGAAGAGCTGATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | CAAAGGATGAATAAGTCACTTCCGAGAAGAAATCACGTTACGCAGATGCGACTTAGTTCTTCTGTCCTCTaGAGGAGGCCAAACTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QRMNKSLPRRNHVTQMRLSSSVL*RRPNSA Trigger: GGCTGAGTTTGGCCTCCTGCAGAGGACAGAAGAACT...AAGTCGCATCTGCGTAACGTGATTTCTTCTCGGAAGTGACTTATTCATCCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | CTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAATGTTGCTTTCAAGGCCTaGTGCACAGCTATCATACTG | + |
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Preference number: 4 (lower is better) Translates to: LRQATAGFIYFAITSHHNVAFKA*CTAIIL Trigger: CAGTATGATAGCTGTGCAGCAGGCCTTGAAAGCAAC...ATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | AAGTATGTAGTCCACATGGAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCAGTCCTCGCACTTCCTaGTCTAATTTGGACCGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KYVVHMEQRLGAHESLNFSPRTS*SNLDRL Trigger: CAACCGGTCCAAATTAGAGCAGGAAGTGCGAGGACT...GAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTCCATGTGGACTACATACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCATGGAAGCTGGGCTTTaGTGCTTTAGAAAGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: NLICLHFISKTTEKGRLVMEAGL*CFRKHC Trigger: ACAGTGCTTTCTAAAGCAGCAAAGCCCAGCTTCCAT...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | GCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAGCTTTCCAGCCTATGAGAGTGGCCCATAGCTaGCTCAGAAACCACCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: AHESLNFTRNPVLAFQPMRVAHS*LRNHLL Trigger: CAGAAGGTGGTTTCTGAGCCAGCTATGGGCCACTCT...CATAGGCTGGAAAGCTAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCCAGCCAGGACATCATTaGGAACTTGCAATAGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LVPKRVLQVRDRLRRALPQPGHH*ELAIVA Trigger: TGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTG...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | ACAATCTTGACACAACTATGTTCTTTAAGATCAACAGCTACGGCAGGCCACCGCGTTCAACTCTCTTCATaGGCTGGTCTTTTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TILTQLCSLRSTATAGHRVQLSS*AGLFPP Trigger: AGGAGGAAAAAGACCAGCTCATGAAGAGAGTTGAAC...GCGGTGGCCTGCCGTAGCTGTTGATCTTAAAGAACATAGTTGTGTCAAGATTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | CAAAGGATGAATAAGTCACTTCCGAGAAGAAATCACGTTACGCAGATGCGACTTATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QRMNKSLPRRNHVTQMRLIRLAV*SGISSL Trigger: CAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAAT...AAGTCGCATCTGCGTAACGTGATTTCTTCTCGGAAGTGACTTATTCATCCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCTGTACAGTGAGAGCTTaGCTTCAATTGGCTCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LVPKRVLQVRDRLRRALPCTVRA*LQLARF Trigger: GAAACGAGCCAATTGAAGGCAAGCTCTCACTGTACA...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | AGAAACTCACTTGGCACCTCCAGTTTTATTAAGAAACGAGCTAAATATGCCCTTAGCCCTGACGGAAGGTaGTCCTTGGGGTCAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: RNSLGTSSFIKKRAKYALSPDGR*SLGSIS Trigger: TGAGATTGACCCCAAGGAGCACCTTCCGTCAGGGCT...AAGGGCATATTTAGCTCGTTTCTTAATAAAACTGGAGGTGCCAAGTGAGTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136024.2 |
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| CDS-3UTR CCA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCGATTCAACATTCGTTTaGCTGTCTGCTCTGGCATCT | + |
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Preference number: 4 (lower is better) Translates to: LVPKRVLQVRDRLRRALPDSTFV*LSALAS Trigger: AGATGCCAGAGCAGACAGCCAAACGAATGTTGAATC...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | ACAATCTTGACACAACTATGTTCTTTAAGATCAACAGCTACGGCAGGCCACCGCAAGCCAGTGGAGCACTaGGTAAATCACAGGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: TILTQLCSLRSTATAGHRKPVEH*VNHRFT Trigger: AGTAAACCTGTGATTTACCCAGTGCTCCACTGGCTT...GCGGTGGCCTGCCGTAGCTGTTGATCTTAAAGAACATAGTTGTGTCAAGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | AAGTATGTAGTCCACATGGAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCCTTTCTTACGAGAAATaGTGGATGCCTGTTGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KYVVHMEQRLGAHESLNFLSYEK*WMPVAC Trigger: ACAGGCAACAGGCATCCATCATTTCTCGTAAGAAAG...GAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTCCATGTGGACTACATACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | GCTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAAAACTCGAAGCTGTCTTaGTATTTTAAGCATTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ATAGHRRLYLLCNHITSQNSKLS*YFKHSL Trigger: CAGCGAATGCTTAAAATAGCAAGACAGCTTCGAGTT...TTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCCTTCATACTGTTTATTaGTGTCAGCCACGGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LVPKRVLQVRDRLRRALPLHTVY*CQPRSH Trigger: ATGAGACCGTGGCTGACACCAATAAACAGTATGAAG...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCGAGCTTGCCTTCAATTaGCTCGTTTCTCATCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLICLHFISKTTEKGRLVELAFN*LVSHHF Trigger: AAAATGATGAGAAACGAGCCAATTGAAGGCAAGCTC...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | AAGACCTTTAAAACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGTCGAACTCCCGGGTCTaGTTTGTTTTCACCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: KTFKTSSAFTSFPRQLRRSNSRV*FVFTNT Trigger: GGTGTTGGTGAAAACAAACCAGACCCGGGAGTTCGA...CCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTTTTAAAGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | GCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAGCTTTCCAGCCTATGCTTCCTGCTCTAATTTaGACCGGTTGCTTTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHESLNFTRNPVLAFQPMLPALI*TGCFQG Trigger: GCCTTGAAAGCAACCGGTCCAAATTAGAGCAGGAAG...CATAGGCTGGAAAGCTAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR CAA 72 bp | AACAGCTACGGCAGGCCACCGCAGGCTTTATTTACTTaGCAATCACATCACATCACAATTGCTTTTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NSYGRPPQALFT*QSHHITIAFHN Trigger: GTTGTGAAAAGCAATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | GTGCTCATGTCTGTGGCATTTCCCGGAGGTTTGTACTTAAGGATACCAAGAAGAACATCATTGAGAACTTaGAATAGTTGCATTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLMSVAFPGGLYLRIPRRTSLRT*NSCIGP Trigger: GGGACCAATGCAACTATTGCAAGTTCTCAATGATGT...TCTTCTTGGTATCCTTAAGTACAAACCTCCGGGAAATGCCACAGACATGAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | ACAATCTTGACACAACTATGTTCTTTAAGATCAACAGCTACGGCAGGCCACCGCATCCCTTCTGATTTCTaGTGTAGAGAATCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TILTQLCSLRSTATAGHRIPSDF*CRESRC Trigger: ACATCTGGATTCTCTACAGCAGAAATCAGAAGGGAT...GCGGTGGCCTGCCGTAGCTGTTGATCTTAAAGAACATAGTTGTGTCAAGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | GAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTATTTTTCCTCCTCCATTaGGCTGATATCCCTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQRLGAHESLNFTRNPVLFFLLH*ADIPSD Trigger: ATCAGAAGGGATATCAGCGCAATGGAGGAGGAAAAA...TAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CCA 90 bp | AAGTATGTAGTCCACATGGAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTCTCTTCATGAGCTaGTCTTTTTCCTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KYVVHMEQRLGAHESLNFTLFMS*SFSSSI Trigger: AATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGT...GAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTCCATGTGGACTACATACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR CAA 72 bp | TGGTGTCAGCCACGGTCTCATCTTGAAGAAACTCACTaGGCACCTCCAGTTTTATTAAGAAACGAGCTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: WCQPRSHLEETH*APPVLLRNELN Trigger: ATTTAGCTCGTTTCTTAATAAAACTGGAGGTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCTGACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | GAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAACATCATTGAGAACTTaGAATAGTTGCATTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EQRLGAHESLNFTRNPVLTSLRT*NSCIGP Trigger: GGGACCAATGCAACTATTGCAAGTTCTCAATGATGT...TAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR GCA 90 bp | CTTCCATCAGCTCTTCATACTGTTTATTGGTGTCAGCCACGGTCTCATCTTGAAACATCATTGAGAACTTaGAATAGTTGCATTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSALHTVYWCQPRSHLETSLRT*NSCIGP Trigger: GGGACCAATGCAACTATTGCAAGTTCTCAATGATGT...TTCAAGATGAGACCGTGGCTGACACCAATAAACAGTATGAAGAGCTGATGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | CAAAGGATGAATAAGTCACTTCCGAGAAGAAATCACGTTACGCAGATGCGACTTGAAGCTGGGCTTTGCTaGTTTAGAAAGCACTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRMNKSLPRRNHVTQMRLEAGLC*FRKHCF Trigger: AAAACAGTGCTTTCTAAAGCAGCAAAGCCCAGCTTC...AAGTCGCATCTGCGTAACGTGATTTCTTCTCGGAAGTGACTTATTCATCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR TCA 90 bp | CAAACAACGAAAGCCTCTCCTGCAGTTAAAAAGACCTTTAAAACCTCATCTGCCAGAATCCAGATGTTTTaGGCTGCTCACACTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: QTTKASPAVKKTFKTSSARIQMF*AAHTLY Trigger: ATAAAGAGTGTGAGCAGCTCAAAACATCTGGATTCT...GGCAGATGAGGTTTTAAAGGTCTTTTTAACTGCAGGAGAGGCTTTCGTTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| 3UTR CAA 72 bp | TCCCTTCTGATTTCTGCTGTAGAGAATCCAGATGTTTaGAGCTGCTCACACTCTTTATGCAGAGTTTTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLISAVENPDV*SCSHSLCRVLK Trigger: CTTTAAAACTCTGCATAAAGAGTGTGAGCAGCTCAAAACATCTGGATTCTCTACAGCAGAAATCAGAAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS-3UTR TCA 90 bp | GCACCTCCAGTTTTATTAAGAAACGAGCTAAATATGCCCTTTTCTTTAGTTCATCAGCCAGGACATCATTaGGAACTTGCAATAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: APPVLLRNELNMPFSLVHQPGHH*ELAIVA Trigger: TGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTG...ATGAACTAAAGAAAAGGGCATATTTAGCTCGTTTCTTAATAAAACTGGAGGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS-3UTR GCA 90 bp | AATGGACACATGCTTACATTACAGAGAGCAAACTTAGCCCTTTCCCATAAAACTATACTGTTCCCTAATTaGTTTCCTCTTCTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGHMLTLQRANLALSHKTILFPN*FPLLLL Trigger: CAGCAAGAGAAGAGGAAAGCAATTAGGGAACAGTAT...AGTTTTATGGGAAAGGGCTAAGTTTGCTCTCTGTAATGTAAGCATGTGTCCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CCA 90 bp | AACTCATCTCCCTTCAGAACCTCAGTGCCGTCGAACTCCCGGGTCTaGTTTGTTTTCACCAACACCTCTCTCTCAAGGCTGGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSSPFRTSVPSNSRV*FVFTNTSLSRLASF Trigger: GAAGCTGGCCAGCCTTGAGAGAGAGGTGTTGGTGAAAACAAACCAGACCCGGGAGTTCGACGGCACTGAGGTTCTGAAGGGAGATGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS GCA 90 bp | TCTTCATTAAACTCTCAGGCTTTGCATCCGCTGCTGCGTGCCGCATaGTCTTCAGCTGATTTTGCACTCTCTGCAATCTCTGCACCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SSLNSQALHPLLRAA*SSADFALSAISAPH Trigger: ATGCGGTGCAGAGATTGCAGAGAGTGCAAAATCAGCTGAAGAGCATGCGGCACGCAGCAGCGGATGCAAAGCCTGAGAGTTTAATGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS GCA 90 bp | ACCAACACCTCTCTCTCAAGGCTGGCCAGCTTCTCCTTGGTCTCCTaGAGCTCCTCAGCTTTGGCTTCTTTCTTACGAGAAATGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TNTSLSRLASFSLVS*SSSALASFLREMMD Trigger: ATCCATCATTTCTCGTAAGAAAGAAGCCAAAGCTGAGGAGCTGCAGGAGACCAAGGAGAAGCTGGCCAGCCTTGAGAGAGAGGTGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CCA 90 bp | CTTGAAGACATTCCTCACGAAGTCCTCGCACTTCCTGCTCTAATTTaGACCGGTTGCTTTCAAGGCCTGCTGCACAGCTATCATACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEDIPHEVLALPALI*TGCFQGLLHSYHTG Trigger: CCCAGTATGATAGCTGTGCAGCAGGCCTTGAAAGCAACCGGTCCAAATTAGAGCAGGAAGTGCGAGGACTTCGTGAGGAATGTCTTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
||
| CDS GCA 90 bp | CAGCCGTTCAACTCTCTTCATGAGCTGGTCTTTTTCCTCCTCCATTaGGCTGATATCTTTGTAGACCAGGCTGGCCTCGAACTCAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QPFNSLHELVFFLLH*ADIFVDQAGLELRN Trigger: ATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGATATCAGCGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGTTGAACGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139590.8 |
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| CDS-3UTR CAA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCTGCAGCTCCTCAGCTTaGGCTTCTTTCTTACGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLICLHFISKTTEKGRLVCSSSA*ASFLRE Trigger: TTCTCGTAAGAAAGAAGCCAAAGCTGAGGAGCTGCA...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CTAGTTCCTAAAAGAGTCCTCCAAGTCAGAGACAGACTGAGAAGAGCATTACCCCTGTACAGTGAGAGCTaGCCTTCAATTGGCTCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LVPKRVLQVRDRLRRALPLYSES*PSIGSF Trigger: AAACGAGCCAATTGAAGGCAAGCTCTCACTGTACAG...GGGTAATGCTCTTCTCAGTCTGTCTCTGACTTGGAGGACTCTTTTAGGAACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | GAACAGAGGCTGGGAGCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAAGATTCAACATTCGTTaGGCTGTCTGCTCTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EQRLGAHESLNFTRNPVLRFNIR*AVCSGI Trigger: GATGCCAGAGCAGACAGCCAAACGAATGTTGAATCT...TAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGCTCCCAGCCTCTGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAATTGCTTTCCTCTTCTCTaGCTGATCAGAAGAGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: LRQATAGFIYFAITSHHNCFPLL*LIRRDV Trigger: TACGTCTCTTCTGATCAGCAAGAGAAGAGGAAAGCA...ATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CCA 90 bp | CTTAAGGATACCAAGAAGATTCAACATTCGTTTGGCTGTCTGCTCTaGCATCTCCTCTCTGATATCAACATCTTGCTTGGGGTCAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKDTKKIQHSFGCLL*HLLSDINILLGVNL Trigger: GAGATTGACCCCAAGCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAATCTTCTTGGTATCCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS-3UTR CAA 90 bp | GCTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAACTTGAAGAAACTCACTaGGCACCTCCAGTTTTATTA | + |
|
Preference number: 5 (lower is better) Translates to: ATAGHRRLYLLCNHITSQLEETH*APPVLL Trigger: TAATAAAACTGGAGGTGCCAAGTGAGTTTCTTCAAG...TTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | AAGACCTTTAAAACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGAGCCACGGTCTCATCTaGAAGAAACTCACTTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KTFKTSSAFTSFPRQLRRSHGLI*KKLTWH Trigger: GTGCCAAGTGAGTTTCTTCAAGATGAGACCGTGGCT...CCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTTTTAAAGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAATGAGAATCCAGATGTTTaGAGCTGCTCACACTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LRQATAGFIYFAITSHHNENPDV*SCSHSL Trigger: TAAAGAGTGTGAGCAGCTCAAAACATCTGGATTCTC...ATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CAAAGGATGAATAAGTCACTTCCGAGAAGAAATCACGTTACGCAGATGCGACTTGCTCTTCAGCTGATTTaGCACTCTCTGCAATCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRMNKSLPRRNHVTQMRLALQLI*HSLQSL Trigger: CAGAGATTGCAGAGAGTGCAAAATCAGCTGAAGAGC...AAGTCGCATCTGCGTAACGTGATTTCTTCTCGGAAGTGACTTATTCATCCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CTACGGCAGGCCACCGCAGGCTTTATTTACTTTGCAATCACATCACATCACAATTTCAATAGTTCGCAGTaGATGCTGAATGGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRQATAGFIYFAITSHHNFNSSQ*MLNGFL Trigger: CAGGAAACCATTCAGCATCAACTGCGAACTATTGAA...ATTGTGATGTGATGTGATTGCAAAGTAAATAAAGCCTGCGGTGGCCTGCCGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | GCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAGCTTTCCAGCCTATGTCTCTCAAGCTCCTCTaGGGTGTAACTGTATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AHESLNFTRNPVLAFQPMSLKLL*GVTVSR Trigger: TCTGGATACAGTTACACCCAAGAGGAGCTTGAGAGA...CATAGGCTGGAAAGCTAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | ACAATCTTGACACAACTATGTTCTTTAAGATCAACAGCTACGGCAGGCCACCGCTTTGCATTCCATCAGTaGTTCAAGATCACGCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: TILTQLCSLRSTATAGHRFAFHQ*FKITPH Trigger: ATGTGGCGTGATCTTGAACAACTGATGGAATGCAAA...GCGGTGGCCTGCCGTAGCTGTTGATCTTAAAGAACATAGTTGTGTCAAGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS TCA 90 bp | GGCTTCTTTCTTACGAGAAATGATGGATGCCTGTTGCCTGTACAGTaGGAGCTTGCCTTCAATTGGCTCGTTTCTCATCATTTTCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFFLTRNDGCLLPVQ*ELAFNWLVSHHFLF Trigger: GAAAAGAAAATGATGAGAAACGAGCCAATTGAAGGCAAGCTCTCACTGTACAGGCAACAGGCATCCATCATTTCTCGTAAGAAAGAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS GCA 90 bp | TTGTACTTAAGGATACCAAGAAGATTCAACATTCGTTTGGCTGTCTaGTCTGGCATCTCCTCTCTGATATCAACATCTTGCTTGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LYLRIPRRFNIRLAV*SGISSLISTSCLGS Trigger: TGACCCCAAGCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAATCTTCTTGGTATCCTTAAGTACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS-3UTR CAA 90 bp | CAAACAACGAAAGCCTCTCCTGCAGTTAAAAAGACCTTTAAAACCTCATCTGCCTCTTCATACTGTTTATaGGTGTCAGCCACGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QTTKASPAVKKTFKTSSASSYCL*VSATVS Trigger: TGAGACCGTGGCTGACACCAATAAACAGTATGAAGA...GGCAGATGAGGTTTTAAAGGTCTTTTTAACTGCAGGAGAGGCTTTCGTTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | AACCTCATCTGCCTTCACTTCATTTCCAAGACAACTGAGAAGGGACGGCTAGTCTTGTTCCTGTTTCTGTaGTGCAAGAAATTCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NLICLHFISKTTEKGRLVLFLFL*CKKFFS Trigger: AGAGAAGAATTTCTTGCACAACAGAAACAGGAACAA...GACTAGCCGTCCCTTCTCAGTTGTCTTGGAAATGAAGTGAAGGCAGATGAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CAAACAACGAAAGCCTCTCCTGCAGTTAAAAAGACCTTTAAAACCTCATCTGCCAAACAGCTGATTCTTTaGTTCCTGTTTCTGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QTTKASPAVKKTFKTSSAKQLIL*FLFLLC Trigger: GCACAACAGAAACAGGAACAAAAGAATCAGCTGTTT...GGCAGATGAGGTTTTAAAGGTCTTTTTAACTGCAGGAGAGGCTTTCGTTGTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | CAAAGGATGAATAAGTCACTTCCGAGAAGAAATCACGTTACGCAGATGCGACTTTCCGTGTTTACTTCATaGACTTTAGTCTCAAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QRMNKSLPRRNHVTQMRLSVFTS*TLVSSS Trigger: CGAACTTGAGACTAAAGTCAATGAAGTAAACACGGA...AAGTCGCATCTGCGTAACGTGATTTCTTCTCGGAAGTGACTTATTCATCCTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS-3UTR CAA 90 bp | GCACATGAGAGTCTTAATTTCACTAGGAATCCTGTGTTAGCTTTCCAGCCTATGTTGAAAACTGTGCTTTaGCTTCGAAGTTTACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AHESLNFTRNPVLAFQPMLKTVL*LRSLLT Trigger: CGTCAGTAAACTTCGAAGCAAAAGCACAGTTTTCAA...CATAGGCTGGAAAGCTAACACAGGATTCCTAGTGAAATTAAGACTCTCATGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
||
| CDS GCA 90 bp | ACATCTTGCTTGGGGTCAATCTCAGCCAGGACATCATTGAGAACTTaGAATAGTTGCATTGGTCCCAAAGAATCAAATGTGATTAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSCLGSISARTSLRT*NSCIGPKESNVIKL Trigger: TAACTTAATCACATTTGATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGATTGACCCCAAGCAAGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
||
| CDS GCA 90 bp | ATCAACATCTTGGGGTCAATCTCAGCCAGGACATCATTGAGAACTTaGAATAGTTGCATTGGTCCCAAAGAATCAAATGTGATTAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: INILGSISARTSLRT*NSCIGPKESNVIKL Trigger: TAACTTAATCACATTTGATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGATTGACCCCAAGATGTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
||
| CDS CAA 90 bp | CATCTCCCTTCAGAACCTCAGTGCCGTCGAACTCCCGGGTCTGGTTaGTTTTCACCAACACCTCTCTCTCAAGGCTGGCCAGCTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HLPSEPQCRRTPGSG*FSPTPLSQGWPASP Trigger: AGGAGAAGCTGGCCAGCCTTGAGAGAGAGGTGTTGGTGAAAACAAACCAGACCCGGGAGTTCGACGGCACTGAGGTTCTGAAGGGAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
||
| CDS CCA 72 bp | CCCTTCAGAACCTCAGTGCCGTCGAACTCCCGGGTCTaGTTTGTTTTCACCAACACCTCTCTCTCAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PFRTSVPSNSRV*FVFTNTSLSRL Trigger: CAGCCTTGAGAGAGAGGTGTTGGTGAAAACAAACCAGACCCGGGAGTTCGACGGCACTGAGGTTCTGAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
||
| CDS CAA 72 bp | TCAGAACCTCAGTGCCGTCGAACTCCCGGGTCTGGTTaGTTTTCACCAACACCTCTCTCTCAAGGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SEPQCRRTPGSG*FSPTPLSQGWP Trigger: TGGCCAGCCTTGAGAGAGAGGTGTTGGTGAAAACAAACCAGACCCGGGAGTTCGACGGCACTGAGGTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
||
| CDS CAA 72 bp | TCTCCTCCTCTAGCCTCTTCATTAAACTCTCAGGCTTaGCATCCGCTGCTGCGTGCCGCATGCTCTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPPLASSLNSQA*HPLLRAACSSA Trigger: AGCTGAAGAGCATGCGGCACGCAGCAGCGGATGCAAAGCCTGAGAGTTTAATGAAGAGGCTAGAGGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS GCA 72 bp | AACTCTCAGGCTTTGCATCCGCTGCTGCGTGCCGCATaGTCTTCAGCTGATTTTGCACTCTCTGCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSQALHPLLRAA*SSADFALSAIS Trigger: AGAGATTGCAGAGAGTGCAAAATCAGCTGAAGAGCATGCGGCACGCAGCAGCGGATGCAAAGCCTGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS GCA 72 bp | GAAGTCCTCGCACTTCCTGCTCTAATTTGGACCGGTTaGTTTCAAGGCCTGCTGCACAGCTATCATACTGGG | + |
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Preference number: 6 (lower is better) Translates to: EVLALPALIWTG*FQGLLHSYHTG Trigger: CCCAGTATGATAGCTGTGCAGCAGGCCTTGAAAGCAACCGGTCCAAATTAGAGCAGGAAGTGCGAGGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CAA 72 bp | CGAAGTCCTCGCACTTCCTGCTCTAATTTGGACCGGTaGCTTTCAAGGCCTGCTGCACAGCTATCATACTGG | + |
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Preference number: 6 (lower is better) Translates to: RSPRTSCSNLDR*LSRPAAQLSYW Trigger: CCAGTATGATAGCTGTGCAGCAGGCCTTGAAAGCAACCGGTCCAAATTAGAGCAGGAAGTGCGAGGACTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CAA 90 bp | AGGCTTTGCATCCGCTGCTGCGTGCCGCATGCTCTTCAGCTGATTTaGCACTCTCTGCAATCTCTGCACCGCATGAAACAGCTGATTCTT | + |
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Preference number: 6 (lower is better) Translates to: RLCIRCCVPHALQLI*HSLQSLHRMKQLIL Trigger: AAGAATCAGCTGTTTCATGCGGTGCAGAGATTGCAGAGAGTGCAAAATCAGCTGAAGAGCATGCGGCACGCAGCAGCGGATGCAAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS TCA 72 bp | ACATTCGTTTGGCTGTCTGCTCTGGCATCTCCTCTCTaGTATCAACATCTTGGGGTCAATCTCAGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: TFVWLSALASPL*YQHLGVNLSQD Trigger: GTCCTGGCTGAGATTGACCCCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS TCA 72 bp | ACATTCGTTTGGCTGTCTGCTCTGGCATCTCCTCTCTaGTATCAACATCTTGCTTGGGGTCAATCTCAGCCA | + |
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Preference number: 6 (lower is better) Translates to: TFVWLSALASPL*YQHLAWGQSQP Trigger: TGGCTGAGATTGACCCCAAGCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS GCA 72 bp | AACTCTCTTCATGAGCTGGTCTTTTTCCTCCTCCATTaGGCTGATATCTTTGTAGACCAGGCTGGCCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: NSLHELVFFLLH*ADIFVDQAGLE Trigger: TTCGAGGCCAGCCTGGTCTACAAAGATATCAGCGCAATGGAGGAGGAAAAAGACCAGCTCATGAAGAGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139590.8 |
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| CDS CAA 72 bp | CTCACTCTTCAGGGCCGACACTCTCTCAAGCTCCTCTaGGGTGTAACTGTATCCAGATATACCCTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LTLQGRHSLKLL*GVTVSRYTLLF Trigger: GAAAAGAAGGGTATATCTGGATACAGTTACACCCAAGAGGAGCTTGAGAGAGTGTCGGCCCTGAAGAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CAA 90 bp | CTCGTCAACCTCACTCTTCAGGGCCGACACTCTCTCAAGCTCCTCTaGGGTGTAACTGTATCCAGATATACCCTTCTTTTCTTCAATAGT | + |
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Preference number: 6 (lower is better) Translates to: LVNLTLQGRHSLKLL*GVTVSRYTLLFFNS Trigger: ACTATTGAAGAAAAGAAGGGTATATCTGGATACAGTTACACCCAAGAGGAGCTTGAGAGAGTGTCGGCCCTGAAGAGTGAGGTTGACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CAA 90 bp | CCCGGAGGTTTGTACTTAAGGATACCAAGAAGATTCAACATTCGTTaGGCTGTCTGCTCTGGCATCTCCTCTCTGATATCAACATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PGGLYLRIPRRFNIR*AVCSGISSLISTSC Trigger: GCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAATCTTCTTGGTATCCTTAAGTACAAACCTCCGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS TCA 72 bp | CTTACGAGAAATGATGGATGCCTGTTGCCTGTACAGTaGGAGCTTGCCTTCAATTGGCTCGTTTCTCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LTRNDGCLLPVQ*ELAFNWLVSHH Trigger: ATGATGAGAAACGAGCCAATTGAAGGCAAGCTCTCACTGTACAGGCAACAGGCATCCATCATTTCTCGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031426.14 |
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| CDS CCA 72 bp | ACCAAGAAGATTCAACATTCGTTTGGCTGTCTGCTCTaGCATCTCCTCTCTGATATCAACATCTTGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: TKKIQHSFGCLL*HLLSDINILLG Trigger: CCCAAGCAAGATGTTGATATCAGAGAGGAGATGCCAGAGCAGACAGCCAAACGAATGTTGAATCTTCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS CCA 72 bp | TCATTGACTTTAGTCTCAAGTTCGAGAAGGTCAGAGTaGCCCATAGCTGGCTCAGAAACCACCTTCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: SLTLVSSSRRSE*PIAGSETTFCK Trigger: TTTACAGAAGGTGGTTTCTGAGCCAGCTATGGGCCACTCTGACCTTCTCGAACTTGAGACTAAAGTCAATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS CAA 72 bp | CGGAAGGTGCTCATGTCTGTGGCATTTCCCGGAGGTTaGTACTTAAGGATACCAAGAAGATTCAACATTCGT | + |
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Preference number: 6 (lower is better) Translates to: RKVLMSVAFPGG*YLRIPRRFNIR Trigger: ACGAATGTTGAATCTTCTTGGTATCCTTAAGTACAAACCTCCGGGAAATGCCACAGACATGAGCACCTTCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS TCA 72 bp | CATCTTGCTTGGGGTCAATCTCAGCCAGGACATCATTaGGAACTTGCAATAGTTGCATTGGTCCCAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: HLAWGQSQPGHH*ELAIVALVPKN Trigger: ATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGATTGACCCCAAGCAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 |
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| CDS TCA 72 bp | TCAACATCTTGGGGTCAATCTCAGCCAGGACATCATTaGGAACTTGCAATAGTTGCATTGGTCCCAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: STSWGQSQPGHH*ELAIVALVPKN Trigger: ATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGATTGACCCCAAGATGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196452.5 |
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| CDS GCA 72 bp | TTGGGGTCAATCTCAGCCAGGACATCATTGAGAACTTaGAATAGTTGCATTGGTCCCAAAGAATCAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LGSISARTSLRT*NSCIGPKESNV Trigger: CACATTTGATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGATTGACCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 ENSMUST00000136024.2 ENSMUST00000196452.5 |
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| CDS CAA 72 bp | GAAATGATGGATGCCTGTTGCCTGTACAGTGAGAGCTaGCCTTCAATTGGCTCGTTTCTCATCATTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: EMMDACCLYSES*PSIGSFLIIFF Trigger: AAAGAAAATGATGAGAAACGAGCCAATTGAAGGCAAGCTCTCACTGTACAGGCAACAGGCATCCATCATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS GCA 72 bp | AAATTCTTCTCTCTCTTTCTCAACTCGAAGCTGTCTTaGTATTTTAAGCATTCGCTGATGGTTCTGAACGGT | + |
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Preference number: 6 (lower is better) Translates to: KFFSLFLNSKLS*YFKHSLMVLNG Trigger: ACCGTTCAGAACCATCAGCGAATGCTTAAAATAGCAAGACAGCTTCGAGTTGAGAAAGAGAGAGAAGAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031426.14 ENSMUST00000139590.8 |
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| CDS GCA 72 bp | ATCTCAGCCAGGACATCATTGAGAACTTGCAATAGTTaGATTGGTCCCAAAGAATCAAATGTGATTAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: ISARTSLRTCNS*IGPKESNVIKL Trigger: TAACTTAATCACATTTGATTCTTTGGGACCAATGCAACTATTGCAAGTTCTCAATGATGTCCTGGCTGAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031426.14 ENSMUST00000127220.8 ENSMUST00000136024.2 ENSMUST00000196452.5 |
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