Pregenerated sensors for IFT80 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027778Ensembl transcript IDs: ENSMUST00000029347.14, ENSMUST00000107812.8, ENSMUST00000148031.2, ENSMUST00000154741.8, ENSMUST00000169064.8
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAGCCAGCGTTACACAATaGATTCCCTCCTCCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TMLYNHHHSPFLGLSPQAASVTQ*IPSSRA Trigger: GGCCCTGGAGGAGGGAATTCATTGTGTAACGCTGGC...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGCCACGTTGCGGCATGTaGCACAGCTCAACCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: ARQTGSSSEESFENLDSKPRCGM*HSSTLL Trigger: TAGAAGGGTTGAGCTGTGGCACATGCCGCAACGTGG...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCAGGGCCTGTCCCTCTTaGCTCTTTTCTGACCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: TGSSSEESFENLDSKSEARACPS*LFSDQK Trigger: CTTCTGGTCAGAAAAGAGGCAAGAGGGACAGGCCCT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCACTTATTCAAAGACAATaGCTTTTTCTTTTGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: TMLYNHHHSPFLGLSPQALIQRQ*LFLLTG Trigger: CCCAGTCAAAAGAAAAAGGCATTGTCTTTGAATAAG...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCACAACACCCACGATaGTATACAACCATCACCACT | + |
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Preference number: 2 (lower is better) Translates to: ARQTGSSSEESFENLDSKSQHPR*YTTITT Trigger: AGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGA...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGGAAGTCAGGGAAGAATaGAGAAAATGCAGTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: ARQTGSSSEESFENLDSKEVREE*RKCSLP Trigger: TGGTAAACTGCATTTTCTTCATTCTTCCCTGACTTC...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAAAACATGCACATCTTTaGTTAGTCCAAACTAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLKHAHL*LVQTSL Trigger: CAAACTAGTTTGGACTAACCAAAGATGTGCATGTTT...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCTTATTCAAAGACAATaGCTTTTTCTTTTGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: TGSSSEESFENLDSKSEALIQRQ*LFLLTG Trigger: CCCAGTCAAAAGAAAAAGGCATTGTCTTTGAATAAG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCAAACATGCACATCTTTaGTTAGTCCAAACTAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: TGSSSEESFENLDSKSEAKHAHL*LVQTSL Trigger: CAAACTAGTTTGGACTAACCAAAGATGTGCATGTTT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGCTTATTCAAAGACAATaGCTTTTTCTTTTGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ARQTGSSSEESFENLDSKLIQRQ*LFLLTG Trigger: CCCAGTCAAAAGAAAAAGGCATTGTCTTTGAATAAG...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR TCA 72 bp | CTCTCACCCCAAGCAGCAATGGCCAGCGTTACACAATaGATTCCCTCCTCCAGGGCCTGTCCCTCTTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LSPQAAMASVTQ*IPSSRACPSCL Trigger: GAGGCAAGAGGGACAGGCCCTGGAGGAGGGAATTCATTGTGTAACGCTGGCCATTGCTGCTTGGGGTGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CAA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCACGATATACATCTACATaGTACCATTTTCCCCAAACC | + |
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Preference number: 3 (lower is better) Translates to: TMLYNHHHSPFLGLSPQARYTST*YHFPQT Trigger: GGTTTGGGGAAAATGGTACAATGTAGATGTATATCG...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCTGTACTCAACACTCCTaGGGCATAGATAAGCATATA | + |
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Preference number: 3 (lower is better) Translates to: TGSSSEESFENLDSKSEACTQHS*GIDKHI Trigger: TATATGCTTATCTATGCCCAAGGAGTGTTGAGTACA...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCGATATACATCTACATaGTACCATTTTCCCCAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TGSSSEESFENLDSKSEARYTST*YHFPQT Trigger: GGTTTGGGGAAAATGGTACAATGTAGATGTATATCG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCTGTACTCAACACTCCTaGGGCATAGATAAGCATATA | + |
|
Preference number: 3 (lower is better) Translates to: TINFDIHLHCTIFPKPFLCTQHS*GIDKHI Trigger: TATATGCTTATCTATGCCCAAGGAGTGTTGAGTACA...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR CAA 72 bp | CTTCACGTAGTGGAAGTTCTCCTAGGCTCATCCACGTaGCGGCATGTGCCACAGCTCAACCCTTCTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHVVEVLLGSST*RHVPQLNPSMR Trigger: TCTCATAGAAGGGTTGAGCTGTGGCACATGCCGCAACGTGGATGAGCCTAGGAGAACTTCCACTACGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAACACTCTTGCTGGACTaGCCGCTGGATGATCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQATLLLD*PLDDRS Trigger: AGACCGATCATCCAGCGGCCAGTCCAGCAAGAGTGT...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAATAATTCCATCGTCCTaGGAGCACAGCCCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQAIIPSS*EHSPTV Trigger: CACTGTGGGGCTGTGCTCGCAGGACGATGGAATTAT...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| 3UTR CAA 72 bp | TTTTCTGACCAGAAGAACTTACTTAATCCGAGTGCCTaGTGTGAGCCCCGCAGGACTGACGTCTGTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FSDQKNLLNPSA*CEPRRTDVCAM Trigger: CATGGCACAGACGTCAGTCCTGCGGGGCTCACACAAGGCACTCGGATTAAGTAAGTTCTTCTGGTCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCACTGCTCCACCACATGTaGAAAGACAACATGCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQALLHHM*KDNMPV Trigger: AACGGGCATGTTGTCTTTGCACATGTGGTGGAGCAG...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAAGAACGTTGCGAACCTaGATGGTCCTTCTCTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQARTLRT*MVLLFV Trigger: AACGAAGAGAAGGACCATGCAGGTTCGCAACGTTCT...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAGGTGATATGCTGATGTaGACCAGGGAGCCATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLGDMLM*TREPSA Trigger: AGCTGATGGCTCCCTGGTGCACATCAGCATATCACC...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCACACTCTTGCTGGACTaGCCGCTGGATGATCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEATLLLD*PLDDRS Trigger: AGACCGATCATCCAGCGGCCAGTCCAGCAAGAGTGT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCAGCACAGCCCCACAGTaGGCTTCTACACTCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEASTAPQ*ASTLFS Trigger: GGAAAAGAGTGTAGAAGCTCACTGTGGGGCTGTGCT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGGTGATGGGGTGCTCATaGGGCTGGGAGCCGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLEVMGCS*GWEPYS Trigger: GCTGTACGGCTCCCAGCCTCATGAGCACCCCATCAC...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTGTGCAAAGACAACATaGCCGTTCCCACAGGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKCAKTT*PFPQAP Trigger: GGGAGCCTGTGGGAACGGGCATGTTGTCTTTGCACA...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTACAGCCTCTTCCCACTTaGAGCTGCTCACATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLQPLPT*SCSHTH Trigger: ATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTG...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGTGATGGGGTGCTCATaGGGCTGGGAGCCGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPVMGCS*GWEPYS Trigger: GCTGTACGGCTCCCAGCCTCATGAGCACCCCATCAC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCGTGATGGGGTGCTCATaGGGCTGGGAGCCGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLVMGCS*GWEPYS Trigger: GCTGTACGGCTCCCAGCCTCATGAGCACCCCATCAC...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGATAATTCCATCGTCCTaGGAGCACAGCCCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKIIPSS*EHSPTV Trigger: CACTGTGGGGCTGTGCTCGCAGGACGATGGAATTAT...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCTGCTCCACCACATGTaGAAAGACAACATGCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEALLHHM*KDNMPV Trigger: AACGGGCATGTTGTCTTTGCACATGTGGTGGAGCAG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCACTTGACGATCTGGTaGTCGTCACTGCATGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAHLTIW*SSLHEY Trigger: GTACTCATGCAGTGACGACCACCAGATCGTCAAGTG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAACCACCAAGTGTGCGTaGTTTAAGGATGCTTTAATG | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQATTKCA*FKDALM Trigger: CATTAAAGCATCCTTAAACCACGCACACTTGGTGGT...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTACATGCCAGGAAACTTTaGAGAAGAAATGAAGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLHARKL*RRNEAP Trigger: GGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATG...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCAGCCTCTTCCCACTTaGAGCTGCTCACATACTCAT | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAQPLPT*SCSHTH Trigger: ATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCATAAAGAACCTTTTCTaGATCAGGGCCCCAGGCTAC | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAIKNLF*IRAPGY Trigger: GTAGCCTGGGGCCCTGATTCAGAAAAGGTTCTTTAT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCATTCGTTAGCGTTACTTaGAAATTTTTCCACTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQAFVSVT*KFFHSQ Trigger: CTGGGAGTGGAAAAATTTTCAAGTAACGCTAACGAA...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR GCA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCATGCATAGGCTATTTCTaGAGTGACCATATCTCGATT | + |
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Preference number: 4 (lower is better) Translates to: TMLYNHHHSPFLGLSPQACIGYF*SDHISI Trigger: AATCGAGATATGGTCACTGCAGAAATAGCCTATGCA...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGCACTTGACGATCTGGTaGTCGTCACTGCATGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKHLTIW*SSLHEY Trigger: GTACTCATGCAGTGACGACCACCAGATCGTCAAGTG...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCATGCCAGGAAACTTTaGAGAAGAAATGAAGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAHARKL*RRNEAP Trigger: GGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAAGTCGACTTTTAAAATaGTGCCATCATGGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLSRLLK*CHHGLS Trigger: GGAAAGCCCATGATGGCATCATTTTAAAAGTCGACT...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCACAAGCGTAACGTATaGAACGATCCAACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAHKRNV*NDPTAN Trigger: ATTTGCCGTTGGATCGTTTCATACGTTACGCTTGTG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAGCATGTATCACACCATaGCAAAGTATGTACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLACITP*QSMYHG Trigger: ACCATGGTACATACTTTGGCATGGTGTGATACATGC...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAATCAATTTCCCCAACTaGTGCATAGGCTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLINFPN*CIGYFC Trigger: GCAGAAATAGCCTATGCAGCAGTTGGGGAAATTGAT...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGAGCACAGCCCCACAGTaGGCTTCTACACTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLESTAPQ*ASTLFS Trigger: GGAAAAGAGTGTAGAAGCTCACTGTGGGGCTGTGCT...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGCACAAGCGTAACGTATaGAACGATCCAACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKHKRNV*NDPTAN Trigger: ATTTGCCGTTGGATCGTTTCATACGTTACGCTTGTG...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTATTCGTTAGCGTTACTTaGAAATTTTTCCACTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLFVSVT*KFFHSQ Trigger: CTGGGAGTGGAAAAATTTTCAAGTAACGCTAACGAA...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCACTTTGGAGAAGAAATaGAGCGCCCTTCATAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEATLEKK*SALHKS Trigger: ACTCTTATGAAGGGCGCTTCATTTCTTCTCCAAAGT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCTTCCACAGAGGATATTaGATGTATCACACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAFHRGY*MYHTMP Trigger: TGGCATGGTGTGATACATGCAATATCCTCTGTGGAA...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCATCAATTTCCCCAACTaGTGCATAGGCTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAINFPN*CIGYFC Trigger: GCAGAAATAGCCTATGCAGCAGTTGGGGAAATTGAT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCACACTCTTGCTGGACTaGCCGCTGGATGATCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLTLLLD*PLDDRS Trigger: AGACCGATCATCCAGCGGCCAGTCCAGCAAGAGTGT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAAACTTGGAAATCAGATaGAACTTACCATCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLNLEIR*NLPSEL Trigger: AAGCTCTGATGGTAAGTTTCATCTGATTTCCAAGTT...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCAGCACAGCCCCACAGTaGGCTTCTACACTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLSTAPQ*ASTLFS Trigger: GGAAAAGAGTGTAGAAGCTCACTGTGGGGCTGTGCT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGAGTCGACTTTTAAAATaGTGCCATCATGGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKSRLLK*CHHGLS Trigger: GGAAAGCCCATGATGGCATCATTTTAAAAGTCGACT...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGGTGATATGCTGATGTaGACCAGGGAGCCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPGDMLM*TREPSA Trigger: AGCTGATGGCTCCCTGGTGCACATCAGCATATCACC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCGGTGATATGCTGATGTaGACCAGGGAGCCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLGDMLM*TREPSA Trigger: AGCTGATGGCTCCCTGGTGCACATCAGCATATCACC...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCTGCATAGGCTATTTCTaGAGTGACCATATCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEACIGYF*SDHISI Trigger: AATCGAGATATGGTCACTGCAGAAATAGCCTATGCA...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGAATTTCCCCAACTGCTaGATAGGCTATTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKNFPNC*IGYFCS Trigger: ACTGCAGAAATAGCCTATGCAGCAGTTGGGGAAATT...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCAACTTGGAAATCAGATaGAACTTACCATCAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEANLEIR*NLPSEL Trigger: AAGCTCTGATGGTAAGTTTCATCTGATTTCCAAGTT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCGAGATTTCATTCTTATaGGAAAGAAGTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TGSSSEESFENLDSKSEAEISFL*ERSFPS Trigger: GGATGGGAAACTTCTTTCTCATAAGAATGAAATCTC...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGGCGTCTGTTTCTTTATaGCTAAACTCTTTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ARQTGSSSEESFENLDSKASVSL*LNSLET Trigger: GGTTTCCAAAGAGTTTAGGCATAAAGAAACAGACGC...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTCTGCTCCACCACATGTaGAAAGACAACATGCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPLLHHM*KDNMPV Trigger: AACGGGCATGTTGTCTTTGCACATGTGGTGGAGCAG...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCACTTGACGATCTGGTaGTCGTCACTGCATGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLHLTIW*SSLHEY Trigger: GTACTCATGCAGTGACGACCACCAGATCGTCAAGTG...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGACTGGTGTTCCTTGCTaGGCTAAAGTTGATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLETGVPC*AKVDLS Trigger: GCTCAGATCAACTTTAGCCCAGCAAGGAACACCAGT...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCAGCCTCTTCCCACTTaGAGCTGCTCACATACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLQPLPT*SCSHTH Trigger: ATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTG...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCATAAAGAACCTTTTCTaGATCAGGGCCCCAGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLIKNLF*IRAPGY Trigger: GTAGCCTGGGGCCCTGATTCAGAAAAGGTTCTTTAT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGCACAAGCGTAACGTATaGAACGATCCAACGGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLEHKRNV*NDPTAN Trigger: ATTTGCCGTTGGATCGTTTCATACGTTACGCTTGTG...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTAGAACGTTGCGAACCTaGATGGTCCTTCTCTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPRTLRT*MVLLFV Trigger: AACGAAGAGAAGGACCATGCAGGTTCGCAACGTTCT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCAGAACGTTGCGAACCTaGATGGTCCTTCTCTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLRTLRT*MVLLFV Trigger: AACGAAGAGAAGGACCATGCAGGTTCGCAACGTTCT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTACTGGTGTTCCTTGCTaGGCTAAAGTTGATCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPTGVPC*AKVDLS Trigger: GCTCAGATCAACTTTAGCCCAGCAAGGAACACCAGT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTCATGCCAGGAAACTTTaGAGAAGAAATGAAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPHARKL*RRNEAP Trigger: GGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATG...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGAGTCGACTTTTAAAATaGTGCCATCATGGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLESRLLK*CHHGLS Trigger: GGAAAGCCCATGATGGCATCATTTTAAAAGTCGACT...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGGCATGTATCACACCATaGCAAAGTATGTACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLEACITP*QSMYHG Trigger: ACCATGGTACATACTTTGGCATGGTGTGATACATGC...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGAATTTCCCCAACTGCTaGATAGGCTATTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLKANKHAHLWLVQTSLENFPNC*IGYFCS Trigger: ACTGCAGAAATAGCCTATGCAGCAGTTGGGGAAATT...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTACTTTGGAGAAGAAATaGAGCGCCCTTCATAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPTLEKK*SALHKS Trigger: ACTCTTATGAAGGGCGCTTCATTTCTTCTCCAAAGT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGCATGTATCACACCATaGCAAAGTATGTACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPACITP*QSMYHG Trigger: ACCATGGTACATACTTTGGCATGGTGTGATACATGC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTTTCCACAGAGGATATTaGATGTATCACACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPFHRGY*MYHTMP Trigger: TGGCATGGTGTGATACATGCAATATCCTCTGTGGAA...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCTTCCACAGAGGATATTaGATGTATCACACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLFHRGY*MYHTMP Trigger: TGGCATGGTGTGATACATGCAATATCCTCTGTGGAA...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTAATTTCCCCAACTGCTaGATAGGCTATTTCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPNFPNC*IGYFCS Trigger: ACTGCAGAAATAGCCTATGCAGCAGTTGGGGAAATT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCATCAATTTCCCCAACTaGTGCATAGGCTATTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLINFPN*CIGYFC Trigger: GCAGAAATAGCCTATGCAGCAGTTGGGGAAATTGAT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCACCACCAAGTGTGCGTaGTTTAAGGATGCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLTTKCA*FKDALM Trigger: CATTAAAGCATCCTTAAACCACGCACACTTGGTGGT...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTACCACCAAGTGTGCGTaGTTTAAGGATGCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPTTKCA*FKDALM Trigger: CATTAAAGCATCCTTAAACCACGCACACTTGGTGGT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCGTGAATCGAGTATCTTaGATTCCACAGAGGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLVNRVS*IPQRIL Trigger: CAATATCCTCTGTGGAATTCAAGATACTCGATTCAC...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGTGAATCGAGTATCTTaGATTCCACAGAGGATATTG | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPVNRVS*IPQRIL Trigger: CAATATCCTCTGTGGAATTCAAGATACTCGATTCAC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR GCA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCGCGTCTGTTTCTTTATaGCTAAACTCTTTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: TINFDIHLHCTIFPKPFLASVSL*LNSLET Trigger: GGTTTCCAAAGAGTTTAGGCATAAAGAAACAGACGC...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR TCA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGAGATTTCATTCTTATaGGAAAGAAGTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPEISFL*ERSFPS Trigger: GGATGGGAAACTTCTTTCTCATAAGAATGAAATCTC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CCA 90 bp | CAAAGCCTTACAGCCTCTTCCCACTTGGAGCTGCTCACATACTCATaGAGGATGGCGGGGTACGGTGATATGCTGATGTGCACCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSLTASSHLELLTYS*RMAGYGDMLMCTRE Trigger: CTCCCTGGTGCACATCAGCATATCACCGTACCCCGCCATCCTCCATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGTAAGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CCA 90 bp | ATTAGGCTGGTTTCACTGGTTAGCAGGTTCCACTTGACGATCTGGTaGTCGTCACTGCATGAGTACAGCTCCTCCGCCGTAGTCCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: IRLVSLVSRFHLTIW*SSLHEYSSSAVVQP Trigger: GGGTTGGACTACGGCGGAGGAGCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAGCCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS TCA 90 bp | CCACTTGGAGCTGCTCACATACTCATGGAGGATGGCGGGGTACGGTaGTATGCTGATGTGCACCAGGGAGCCATCAGCTCTTCTTATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGAAHILMEDGGVR*YADVHQGAISSSYS Trigger: ACTATAAGAAGAGCTGATGGCTCCCTGGTGCACATCAGCATATCACCGTACCCCGCCATCCTCCATGAGTATGTGAGCAGCTCCAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CCA 90 bp | ACTATTAGGCTGGTTTCACTGGTTAGCAGGTTCCACTTGACGATCTaGTGGTCGTCACTGCATGAGTACAGCTCCTCCGCCGTAGTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TIRLVSLVSRFHLTI*WSSLHEYSSSAVVQ Trigger: TTGGACTACGGCGGAGGAGCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAGCCTAATAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
||
| CDS TCA 90 bp | CGTTCAGGATGTCTGTTCTCATGCCAGGAAACTTTGGAGAAGAAATaGAGCGCCCTTCATAAGAGTGCAGGTAGATACCCCCGCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RSGCLFSCQETLEKK*SALHKSAGRYPRHP Trigger: TGGATGGCGGGGGTATCTACCTGCACTCTTATGAAGGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATGAGAACAGACATCCTGAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS CCA 90 bp | CACAGTCTGAGCGTTCAGGATGTCTGTTCTCATGCCAGGAAACTTTaGAGAAGAAATGAAGCGCCCTTCATAAGAGTGCAGGTAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: HSLSVQDVCSHARKL*RRNEAPFIRVQVDT Trigger: GGTATCTACCTGCACTCTTATGAAGGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATGAGAACAGACATCCTGAACGCTCAGACTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTTTAAGCCCACACTCTaGCTGGACTGGCCGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ARQTGSSSEESFENLDSKFKPTL*LDWPLD Trigger: ATCCAGCGGCCAGTCCAGCAAGAGTGTGGGCTTAAA...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCTAGGGGTTTTCCAGTaGACGCCTCAAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEALGVFQ*TPQRGR Trigger: TCTTCCTCTTTGAGGCGTCAACTGGAAAACCCCTAG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGACAGCCTCTTCCCACTaGGAGCTGCTCACATACTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQTGSSSEESFENLDSKTASSH*ELLTYS Trigger: TGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGT...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAGTTGATCTGTATGGCTaGATAAACAAGGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLVDLYG*INKASL Trigger: CAGGCTGGCCTTGTTTATCAAGCCATACAGATCAAC...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCATTATGCCTAAACTCTTaGGAAACCAGTGAAGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TMLYNHHHSPFLGLSPQALCLNS*ETSEGL Trigger: TAGACCTTCACTGGTTTCCAAAGAGTTTAGGCATAA...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACGATGCTATACAACCATCACCACTCTCCATTTCTAGGGCTCTCACCCCAAGCAAATATGCTGCCAGTGTaGGGTTTCTCTAAAGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: TMLYNHHHSPFLGLSPQANMLPV*GFSKAY Trigger: ATATGCTTTAGAGAAACCCAACACTGGCAGCATATT...TGCTTGGGGTGAGAGCCCTAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCGTTGATCTGTATGGCTaGATAAACAAGGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEAVDLYG*INKASL Trigger: CAGGCTGGCCTTGTTTATCAAGCCATACAGATCAAC...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCTTTCTCCCAGTCTATTaGGAGGCCCTCTGCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEAFLPVY*EALCIL Trigger: CAATATGCAGAGGGCCTCCAAATAGACTGGGAGAAA...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCATGTCATCAGGCAGCTaGACTATTAGGCTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEAMSSGS*TIRLVS Trigger: TGAAACCAGCCTAATAGTCAAGCTGCCTGATGACAT...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTACAGCTTTGTCCTTTATaGCTATCGTGTCATTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLQLCPL*LSCHCS Trigger: TGAGCAATGACACGATAGCAATAAAGGACAAAGCTG...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAGTATCAACGTGGGTTTaGTATTTTACAGCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLVSTWV*YFTANS Trigger: GGAGTTGGCTGTAAAATACAAAACCCACGTTGATAC...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGATGTCATCAGGCAGCTaGACTATTAGGCTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQTGSSSEESFENLDSKMSSGS*TIRLVS Trigger: TGAAACCAGCCTAATAGTCAAGCTGCCTGATGACAT...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACGGAGTTCACAACACCCACGATGCTATACAACCATCACCACTCTCCATTTCTAAATATGCTGCCAGTGTaGGGTTTCTCTAAAGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: TEFTTPTMLYNHHHSPFLNMLPV*GFSKAY Trigger: ATATGCTTTAGAGAAACCCAACACTGGCAGCATATT...TAGAAATGGAGAGTGGTGATGGTTGTATAGCATCGTGGGTGTTGTGAACTCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCCAGCTTTGTCCTTTATaGCTATCGTGTCATTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEAQLCPL*LSCHCS Trigger: TGAGCAATGACACGATAGCAATAAAGGACAAAGCTG...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCGTATCAACGTGGGTTTaGTATTTTACAGCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEAVSTWV*YFTANS Trigger: GGAGTTGGCTGTAAAATACAAAACCCACGTTGATAC...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCTTTAAGCCCACACTCTaGCTGGACTGGCCGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TINFDIHLHCTIFPKPFLFKPTL*LDWPLD Trigger: ATCCAGCGGCCAGTCCAGCAAGAGTGTGGGCTTAAA...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTCTGAGGCCTTATGCCTAAACTCTTaGGAAACCAGTGAAGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGSSSEESFENLDSKSEALCLNS*ETSEGL Trigger: TAGACCTTCACTGGTTTCCAAAGAGTTTAGGCATAA...GGCCTCAGACTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGCTAGGGGTTTTCCAGTaGACGCCTCAAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLKANKHAHLWLVQTSLELGVFQ*TPQRGR Trigger: TCTTCCTCTTTGAGGCGTCAACTGGAAAACCCCTAG...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTACAGCCTCTTCCCACTaGGAGCTGCTCACATACTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPTASSH*ELLTYS Trigger: TGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTAGGGGTTTTCCAGTaGACGCCTCAAAGAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TINFDIHLHCTIFPKPFLLGVFQ*TPQRGR Trigger: TCTTCCTCTTTGAGGCGTCAACTGGAAAACCCCTAG...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGTTTCTCCCAGTCTATTaGGAGGCCCTCTGCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: LLKANKHAHLWLVQTSLEFLPVY*EALCIL Trigger: CAATATGCAGAGGGCCTCCAAATAGACTGGGAGAAA...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGCTAATTCTTGATGCTTaGGTTCCTTTGAGAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: ARQTGSSSEESFENLDSKLILDA*VPLREI Trigger: TATCTCTCTCAAAGGAACCAAAGCATCAAGAATTAG...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGACAAACAGGGTCATCCAGTGAGGAGAGTTTTGAAAATTTAGACTCTAAGTGTGAATCGAGTATCTaGAATTCCACAGAGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: ARQTGSSSEESFENLDSKCESSI*NSTEDI Trigger: AATATCCTCTGTGGAATTCAAGATACTCGATTCACA...CTTAGAGTCTAAATTTTCAAAACTCTCCTCACTGGATGACCCTGTTTGTCTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTGTTGATCTGTATGGCTaGATAAACAAGGCCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPVDLYG*INKASL Trigger: CAGGCTGGCCTTGTTTATCAAGCCATACAGATCAAC...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTTTTCTCCCAGTCTATTaGGAGGCCCTCTGCATATTG | + |
|
Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPFLPVY*EALCIL Trigger: CAATATGCAGAGGGCCTCCAAATAGACTGGGAGAAA...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTATGTCATCAGGCAGCTaGACTATTAGGCTGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPMSSGS*TIRLVS Trigger: TGAAACCAGCCTAATAGTCAAGCTGCCTGATGACAT...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | CTTCTTAAAGCAAACAAACATGCACATCTTTGGTTAGTCCAAACTAGTTTGGAGGTATCAACGTGGGTTTaGTATTTTACAGCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLKANKHAHLWLVQTSLEVSTWV*YFTANS Trigger: GGAGTTGGCTGTAAAATACAAAACCCACGTTGATAC...CTCCAAACTAGTTTGGACTAACCAAAGATGTGCATGTTTGTTTGCTTTAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCAGCTTTGTCCTTTATaGCTATCGTGTCATTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TINFDIHLHCTIFPKPFLQLCPL*LSCHCS Trigger: TGAGCAATGACACGATAGCAATAAAGGACAAAGCTG...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTTTATGCCTAAACTCTTaGGAAACCAGTGAAGGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPLCLNS*ETSEGL Trigger: TAGACCTTCACTGGTTTCCAAAGAGTTTAGGCATAA...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTAATTCTTGATGCTTaGGTTCCTTTGAGAGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: TINFDIHLHCTIFPKPFLLILDA*VPLREI Trigger: TATCTCTCTCAAAGGAACCAAAGCATCAAGAATTAG...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | ACTATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCTGTGAATCGAGTATCTaGAATTCCACAGAGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: TINFDIHLHCTIFPKPFLCESSI*NSTEDI Trigger: AATATCCTCTGTGGAATTCAAGATACTCGATTCACA...GAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
||
| CDS-3UTR CAA 90 bp | TATAAACTTCGATATACATCTACATTGTACCATTTTCCCCAAACCCTTTCTCCTTGTGAATCGAGTATCTaGAATTCCACAGAGGATATT | + |
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Preference number: 5 (lower is better) Translates to: YKLRYTSTLYHFPQTLSPCESSI*NSTEDI Trigger: AATATCCTCTGTGGAATTCAAGATACTCGATTCACA...AGGAGAAAGGGTTTGGGGAAAATGGTACAATGTAGATGTATATCGAAGTTTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS TCA 72 bp | GCTGCTCACATACTCATGGAGGATGGCGGGGTACGGTaGTATGCTGATGTGCACCAGGGAGCCATCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AAHILMEDGGVR*YADVHQGAISS Trigger: AGAGCTGATGGCTCCCTGGTGCACATCAGCATATCACCGTACCCCGCCATCCTCCATGAGTATGTGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS TCA 72 bp | CTCTGTCCCGGAACTCCAGGAGATCCACGGCATCATTaGGAACGTTGCGAACCTGCATGGTCCTTCTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LCPGTPGDPRHH*ERCEPAWSFSS Trigger: CGAAGAGAAGGACCATGCAGGTTCGCAACGTTCTCAATGATGCCGTGGATCTCCTGGAGTTCCGGGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CCA 72 bp | CTGGTTTCACTGGTTAGCAGGTTCCACTTGACGATCTaGTGGTCGTCACTGCATGAGTACAGCTCCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LVSLVSRFHLTI*WSSLHEYSSSA Trigger: GGCGGAGGAGCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS CCA 72 bp | ACAGCCTCTTCCCACTTGGAGCTGCTCACATACTCATaGAGGATGGCGGGGTACGGTGATATGCTGATGTGC | + |
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Preference number: 6 (lower is better) Translates to: TASSHLELLTYS*RMAGYGDMLMC Trigger: GCACATCAGCATATCACCGTACCCCGCCATCCTCCATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CAA 90 bp | GGCAGCTTGACTATTAGGCTGGTTTCACTGGTTAGCAGGTTCCACTaGACGATCTGGTGGTCGTCACTGCATGAGTACAGCTCCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GSLTIRLVSLVSRFH*TIWWSSLHEYSSSA Trigger: GGCGGAGGAGCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAGCCTAATAGTCAAGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS CAA 72 bp | ACTCTGTCCCGGAACTCCAGGAGATCCACGGCATCATaGAGAACGTTGCGAACCTGCATGGTCCTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLSRNSRRSTAS*RTLRTCMVLLF Trigger: GAAGAGAAGGACCATGCAGGTTCGCAACGTTCTCAATGATGCCGTGGATCTCCTGGAGTTCCGGGACAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CAA 72 bp | TTAACAAAGCGGCAAAGCCTTACAGCCTCTTCCCACTaGGAGCTGCTCACATACTCATGGAGGATGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: LTKRQSLTASSH*ELLTYSWRMAG Trigger: CCCCGCCATCCTCCATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGTAAGGCTTTGCCGCTTTGTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CAA 90 bp | CTTTGCTCCTTAACAAAGCGGCAAAGCCTTACAGCCTCTTCCCACTaGGAGCTGCTCACATACTCATGGAGGATGGCGGGGTACGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LCSLTKRQSLTASSH*ELLTYSWRMAGYGD Trigger: ATCACCGTACCCCGCCATCCTCCATGAGTATGTGAGCAGCTCCAAGTGGGAAGAGGCTGTAAGGCTTTGCCGCTTTGTTAAGGAGCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CAA 72 bp | CGGAACTCCAGGAGATCCACGGCATCATTGAGAACGTaGCGAACCTGCATGGTCCTTCTCTTCGTTAGCGTT | + |
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Preference number: 6 (lower is better) Translates to: RNSRRSTASLRT*RTCMVLLFVSV Trigger: AACGCTAACGAAGAGAAGGACCATGCAGGTTCGCAACGTTCTCAATGATGCCGTGGATCTCCTGGAGTTCCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS TCA 72 bp | CTATTAGGCTGGTTTCACTGGTTAGCAGGTTCCACTTaGCGATCTGGTGGTCGTCACTGCATGAGTACAGCT | + |
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Preference number: 6 (lower is better) Translates to: LLGWFHWLAGST*RSGGRHCMSTA Trigger: AGCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAGCCTAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS CAA 72 bp | ACTATTAGGCTGGTTTCACTGGTTAGCAGGTTCCACTaGACGATCTGGTGGTCGTCACTGCATGAGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: TIRLVSLVSRFH*TIWWSSLHEYS Trigger: GCTGTACTCATGCAGTGACGACCACCAGATCGTCAAGTGGAACCTGCTAACCAGTGAAACCAGCCTAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS TCA 72 bp | AGTGAAGGTCTATCGGGTAGATGTCATCAGGCAGCTTaGCTATTAGGCTGGTTTCACTGGTTAGCAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SEGLSGRCHQAA*LLGWFHWLAGS Trigger: GGAACCTGCTAACCAGTGAAACCAGCCTAATAGTCAAGCTGCCTGATGACATCTACCCGATAGACCTTCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000148031.2 ENSMUST00000154741.8 ENSMUST00000169064.8 |
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| CDS CCA 72 bp | AGCGTTCAGGATGTCTGTTCTCATGCCAGGAAACTTTaGAGAAGAAATGAAGCGCCCTTCATAAGAGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SVQDVCSHARKL*RRNEAPFIRVQ Trigger: CTGCACTCTTATGAAGGGCGCTTCATTTCTTCTCCAAAGTTTCCTGGCATGAGAACAGACATCCTGAACGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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| CDS CAA 72 bp | GACGCCTCAAAGAGGAAGATTATCTTCTCGTCAGCTTaGTCCTTTATTGCTATCGTGTCATTGCTCAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: DASKRKIIFSSA*SFIAIVSLLRD Trigger: GTCTCTGAGCAATGACACGATAGCAATAAAGGACAAAGCTGACGAGAAGATAATCTTCCTCTTTGAGGCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029347.14 ENSMUST00000107812.8 ENSMUST00000169064.8 |
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