Pregenerated sensors for IFT46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002031Ensembl transcript IDs: ENSMUST00000002099.11, ENSMUST00000118186.2, ENSMUST00000125877.8, ENSMUST00000151905.8, ENSMUST00000214854.3, ENSMUST00000238800.2, ENSMUST00000239014.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCGCTTAAGCAGCTCCTCCAAACACTGCCACAGCCGTGCTCCCTaGAGCCACACGCTCTTGCCTGTGCCTCTCAACCACCAGTGGTTA | + |
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Preference number: 1 (lower is better) Translates to: PRLSSSSKHCHSRAP*SHTLLPVPLNHQWL Trigger: TAACCACTGGTGGTTGAGAGGCACAGGCAAGAGCGTGTGGCTCCAGGGAGCACGGCTGTGGCAGTGTTTGGAGGAGCTGCTTAAGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | CAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAATaGCAACGGGAGGCAGGTGTAAACAAGGTGTGCCCTGCCCTCGAG | + |
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Preference number: 1 (lower is better) Translates to: QLRGPQQSGYILPLE*QREAGVNKVCPALE Trigger: CTCGAGGGCAGGGCACACCTTGTTTACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | GAGCAGTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTaGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: EQSVCLWKLCPQPVS*GSQSPSSSNSEAHS Trigger: GCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | GCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTaGCTACATCCTTCCTCTGGAATGGCAACGGGAGGCAGGTGTAAA | + |
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Preference number: 1 (lower is better) Translates to: ALRVPVLPTQRPTAE*LHPSSGMATGGRCK Trigger: TTTACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | CCAGAATGGGGCAGGAGAGATGGCTCAGCAGTTCAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATAGT | + |
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Preference number: 1 (lower is better) Translates to: PEWGRRDGSAVQSTG*SSRGPEFNSQQPHS Trigger: ACTATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTGAACTGCTGAGCCATCTCTCCTGCCCCATTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | CCTCGAGGACAAGGCAGCAGGGTTCATGTTGACAGAGCCCAGCTGTaGAGCAGGGAGACATTAAGCTGCCAACAGAGACCACATCTTCAT | + |
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Preference number: 1 (lower is better) Translates to: PRGQGSRVHVDRAQL*SRETLSCQQRPHLH Trigger: ATGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAACATGAACCCTGCTGCCTTGTCCTCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | CAGTATGTATTCCATCACAACCTGACAGAGCAGTCTGTGTGTCTCTaGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: QYVFHHNLTEQSVCL*KLCPQPVSWGSQSP Trigger: GGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAATACATACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | CCACCATGTGAGTCCCAGGGATTGAACTCAGGTGGCCAAGCTTTGTaGCAAGCACCTTTACCTGCTGTGCCATCTTGTCAGTTCCTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PPCESQGLNSGGQAL*QAPLPAVPSCQFLP Trigger: GGGAAGGAACTGACAAGATGGCACAGCAGGTAAAGGTGCTTGTCACAAAGCTTGGCCACCTGAGTTCAATCCCTGGGACTCACATGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | AGCCAGAAGCCATGGGTGAAAACCAGTATGTATTCCATCACAACCTaGCAGAGCAGTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTG | + |
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Preference number: 1 (lower is better) Translates to: SQKPWVKTSMYSITT*QSSLCVSGSSVPNL Trigger: CAGGTTGGGGACAGAGCTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAATACATACTGGTTTTCACCCATGGCTTCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | GAAACCTGGACCACTATGCTGGCATGTGACTGGGCAAAAATGGTCTaGTCTAATGCTGTGGTTTGGGTGGGATGCCAAGTGAGGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: ETWTTMLACDWAKMV*SNAVVWVGCQVRSG Trigger: TCCAGACCTCACTTGGCATCCCACCCAAACCACAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | CCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCACTATaGTGGCATGTGACTGGGCAAAAATGGTCTGATCTAATGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PWRHHTKEQLKPGPL*WHVTGQKWSDLMLW Trigger: CCACAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | CCTCCTAGATACCAACCTTTAAACTACCATGCACCACTGTGTGTGTaGCCGCATGTGTATGTGTGTGTGCATGCTCATGCAAGTGCACGT | + |
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Preference number: 1 (lower is better) Translates to: PPRYQPLNYHAPLCV*PHVYVCVHAHASAR Trigger: ACGTGCACTTGCATGAGCATGCACACACACATACACATGCGGGCACACACACAGTGGTGCATGGTAGTTTAAAGGTTGGTATCTAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | GGGATTGAACTCAGGTGGCCAAGCTTTGTGACAAGCACCTTTACCTaGTGTGCCATCTTGTCAGTTCCTTCCCCATACTTTTGTCACCAA | + |
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Preference number: 1 (lower is better) Translates to: GIELRWPSFVTSTFT*CAILSVPSPYFCHQ Trigger: TTGGTGACAAAAGTATGGGGAAGGAACTGACAAGATGGCACAGCAGGTAAAGGTGCTTGTCACAAAGCTTGGCCACCTGAGTTCAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | GGGCTGAGAGCTTCCACGTGGACAAAGGAAAATTCCTCATTCTTGTaGTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGG | + |
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Preference number: 1 (lower is better) Translates to: GLRASTWTKENSSFL*CWVLIPGLHFCLSW Trigger: CCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGTGGAAGCTCTCAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | CAAAAATGGTCTGATCTAATGCTGTGGTTTGGGTGGGATGCCAAGTaGGGTCTGGAAATTACTCAGTTTGCTTCCTTGCTGGTAAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: QKWSDLMLWFGWDAK*GLEITQFASLLVRG Trigger: GCCCCTTACCAGCAAGGAAGCAAACTGAGTAATTTCCAGACCTCACTTGGCATCCCACCCAAACCACAGCATTAGATCAGACCATTTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | CAAGTTTTAGTAGTTTTCTCCTTCCACCATGTGAGTCCCAGGGATTaGACTCAGGTGGCCAAGCTTTGTGACAAGCACCTTTACCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: QVLVVFSFHHVSPRD*TQVAKLCDKHLYLL Trigger: CAGCAGGTAAAGGTGCTTGTCACAAAGCTTGGCCACCTGAGTTCAATCCCTGGGACTCACATGGTGGAAGGAGAAAACTACTAAAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 90 bp | CTGAGAGCTTCCACGTGGACAAAGGAAAATTCCTCATTCTTGTGCTaGTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAG | + |
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Preference number: 1 (lower is better) Translates to: LRASTWTKENSSFLC*WVLIPGLHFCLSWE Trigger: CTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGTGGAAGCTCTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | TGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCACTATGCTaGCATGTGACTGGGCAAAAATGGTCTGATCTAATGCTGTGGTTT | + |
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Preference number: 1 (lower is better) Translates to: WRHHTKEQLKPGPLC*HVTGQKWSDLMLWF Trigger: AAACCACAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | GACAAAGGAAAATTCCTCATTCTTGTGCTGCTGGGTTCTGATTCCTaGTCTGCATTTTTGTCTGTCATGGGAGGTGAGGAGGTGAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: DKGKFLILVLLGSDS*SAFLSVMGGEEVRG Trigger: TCCTCTCACCTCCTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CCA 90 bp | AGAGCTTCCACGTGGACAAAGGAAAATTCCTCATTCTTGTGCTGCTaGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: RASTWTKENSSFLCC*VLIPGLHFCLSWEV Trigger: CACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGTGGAAGCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR TCA 90 bp | CCAGTCTTTTCTGTATTAAATGTTTTCGATCACACAGCAGGCACCTaGGTACCCGCCGGGAGCAGCAGTTCAGTATCTGTTAGTCTAATG | + |
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Preference number: 1 (lower is better) Translates to: PVFSVLNVFDHTAGT*VPAGSSSSVSVSLM Trigger: CATTAGACTAACAGATACTGAACTGCTGCTCCCGGCGGGTACTCAGGTGCCTGCTGTGTGATCGAAAACATTTAATACAGAAAAGACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGCAGCAGGGTTCATGTTaGCAGAGCCCAGCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VCVSLEALSPTCVLGLSEQQGSC*QSPAVE Trigger: CTCCACAGCTGGGCTCTGTCAACATGAACCCTGCTG...CTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCAAACAAGGTGTGCCCTaGCCTCGAGGACAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LCVSGSSVPNLCPGALRVKQGVP*PRGQGS Trigger: GCTGCCTTGTCCTCGAGGGCAGGGCACACCTTGTTT...GACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCAGCAGGGTTCATGTTaGCAGAGCCCAGCTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SGSSVPNLCPGALRVPVLQQGSC*QSPAVE Trigger: CTCCACAGCTGGGCTCTGTCAACATGAACCCTGCTG...AAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | AACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAAAACAAGGTGTGCCCTaGCCTCGAGGACAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: NLCPGALRVPVLPTQRPTKQGVP*PRGQGS Trigger: GCTGCCTTGTCCTCGAGGGCAGGGCACACCTTGTTT...TGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCAAACAAGGTGTGCCCTaGCCTCGAGGACAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RVPVLPTQRPTAEWLHPSKQGVP*PRGQGS Trigger: GCTGCCTTGTCCTCGAGGGCAGGGCACACCTTGTTT...GGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACCACTATGCTGGCATGTGACTGGGCAAAAATGGTCTGATCTAATGCTGAGGCACAGGCAGGCCTaGTGTAAGGCCCCAACCCGA | + |
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Preference number: 2 (lower is better) Translates to: PGPLCWHVTGQKWSDLMLRHRQA*CKAPTR Trigger: TCGGGTTGGGGCCTTACAGCAGGCCTGCCTGTGCCT...CAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR TCA 90 bp | GAGATGGCTCAGCAGTTCAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCAGGGTGGGATGCCAAGTaGGGTCTGGAAATTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: EMAQQFRALAALPEVLSSGWDAK*GLEITQ Trigger: CTGAGTAATTTCCAGACCTCACTTGGCATCCCACCC...TGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTGAACTGCTGAGCCATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGTCAGGCTGACAGTGGAGCCTTCCCTGCAATCCATTGTGACACCACTTTCTTCTGCAACCCTCCTCTaGCCTCAGCATCATCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: LVRLTVEPSLQSIVTPLSSATLL*PQHHLA Trigger: GGCCAGATGATGCTGAGGGCAGAGGAGGGTTGCAGA...AGAAAGTGGTGTCACAATGGATTGCAGGGAAGGCTCCACTGTCAGCCTGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTGTAAGGCCCCAACCCGACCCTACTCACTCTAGAGAGCATCAGGGCAATTATTCCATCACAACCTaGCAGAGCAGTCTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PAVRPQPDPTHSREHQGNYSITT*QSSLCV Trigger: GACACACAGACTGCTCTGTCAGGTTGTGATGGAATA...ATTGCCCTGATGCTCTCTAGAGTGAGTAGGGTCGGGTTGGGGCCTTACAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACCACTATGCTGGCATGTGACTGGGCAAAAATGGTCTGATCTAATGCTGTTCGGGGTTGTGGGCTaGTTGGGGAGAAAGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: PGPLCWHVTGQKWSDLMLFGVVG*LGRKGG Trigger: ACCTCCCTTTCTCCCCAAGCAGCCCACAACCCCGAA...CAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTGAGGCTACATCCTTCCTCTaGAATGGCAACGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VLLGSDSWSAFLSVMGGEATSFL*NGNGRQ Trigger: CTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGC...CTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTAGGGAGACATTAAGCTaGCAACAGAGACCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: SGSSVPNLCPGALRVPVLRETLS*QQRPHL Trigger: AAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCT...AAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCATGAAAGATGGTCAAAGGATGCAGGTGAAGGGGTGAACAGTGGGCACGGTCAGTCTGTGTGTCTCTaGAAGCTCTGTCCCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: FHERWSKDAGEGVNSGHGQSVCL*KLCPQP Trigger: AGGTTGGGGACAGAGCTTCCAGAGACACACAGACTG...ACCGTGCCCACTGTTCACCCCTTCACCTGCATCCTTTGACCATCTTTCATGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | AACCAGTATGTATTCCATCACAACCTGACAGAGCAGTCTGTGTGTCTCTGGAAGGCTACATCCTTCCTCTaGAATGGCAACGGGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: NQYVFHHNLTEQSVCLWKATSFL*NGNGRQ Trigger: CTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGC...CTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAATACATACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCAAAAGATTCGGGGTTGTaGGCTGCTTGGGGAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPKDSGL*AAWGER Trigger: CCTTTCTCCCCAAGCAGCCCACAACCCCGAATCTTT...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCATTTGCTGAATATACCTaGAGGCCTGGTACCTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPFAEYT*RPGTWE Trigger: CTCCCAGGTACCAGGCCTTCAGGTATATTCAGCAAA...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCTGAGCTTCATAGTGAACTGTAGACCACTCTCGGCTGTACAGAGAACCAGTGTGACTGGGCAAAAATaGTCTGATCTAATGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RLSFIVNCRPLSAVQRTSVTGQK*SDLMLW Trigger: CCACAGCATTAGATCAGACCATTTTTGCCCAGTCAC...ACTGGTTCTCTGTACAGCCGAGAGTGGTCTACAGTTCACTATGAAGCTCAGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCATATTCCATCACAACCTaGCAGAGCAGTCTGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPYSITT*QSSLCV Trigger: GACACACAGACTGCTCTGTCAGGTTGTGATGGAATA...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACCACTATGCTGGCATGTGACTGGGCAAAAATGGTCTGATCTAATGCTGAGGGAGACATTAAGCTaGCAACAGAGACCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: PGPLCWHVTGQKWSDLMLRETLS*QQRPHL Trigger: AAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCT...CAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTGAGATGAGCCAGAAGCCATaGGTGAAAACCAGTATGTAT | + |
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Preference number: 2 (lower is better) Translates to: VLLGSDSWSAFLSVMGGEMSQKP*VKTSMY Trigger: ATACATACTGGTTTTCACCCATGGCTTCTGGCTCAT...CTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR CAA 90 bp | AGGTGGCCAAGCTTTGTGACAAGCACCTTTACCTGCTGTGCCATCTaGTCAGTTCCTTCCCCATACTTTTGTCACCAAATTGTTGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: RWPSFVTSTFTCCAI*SVPSPYFCHQIVVL Trigger: TAACACAACAATTTGGTGACAAAAGTATGGGGAAGGAACTGACAAGATGGCACAGCAGGTAAAGGTGCTTGTCACAAAGCTTGGCCACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCAATGCCAAGTGAGGTCTaGAAATTACTCAGTTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPMPSEV*KLLSLL Trigger: AAGCAAACTGAGTAATTTCCAGACCTCACTTGGCAT...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| 3UTR GCA 72 bp | CCGCTTAAGCAGCTCCTCCAAACACTGCCACAGCCGTaGTCCCTGGAGCCACACGCTCTTGCCTGTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLKQLLQTLPQP*SLEPHALACAS Trigger: AGAGGCACAGGCAAGAGCGTGTGGCTCCAGGGAGCACGGCTGTGGCAGTGTTTGGAGGAGCTGCTTAAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | AGCAGCTCCTCCAAACACTGCCACAGCCGTGCTCCCTaGAGCCACACGCTCTTGCCTGTGCCTCTCAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSKHCHSRAP*SHTLLPVPLNH Trigger: GTGGTTGAGAGGCACAGGCAAGAGCGTGTGGCTCCAGGGAGCACGGCTGTGGCAGTGTTTGGAGGAGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | GGTGGAGGCGGGAAGATCAGGCCTTCAAGACCAGCCTaGACAGATAGTTCGAAGCCAAGCTGGGCTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGGGKIRPSRPA*TDSSKPSWATG Trigger: TCCTGTAGCCCAGCTTGGCTTCGAACTATCTGTGCAGGCTGGTCTTGAAGGCCTGATCTTCCCGCCTCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | GGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAATaGCAACGGGAGGCAGGTGTAAACAAGGTGTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GPQQSGYILPLE*QREAGVNKVCP Trigger: AGGGCACACCTTGTTTACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | GTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTaGCTACATCCTTCCTCTGGAATGGCAACGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VPVLPTQRPTAE*LHPSSGMATGG Trigger: GCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | GTTCTCTTAGCGGGTCTCTCACAGAGGAGGGAATACTaGAGGACCAAACACAGGCCTTGCTGGGTGTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VLLAGLSQRREY*RTKHRPCWVSP Trigger: GGGGGACACCCAGCAAGGCCTGTGTTTGGTCCTTCAGTATTCCCTCCTCTGTGAGAGACCCGCTAAGAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR GCA 72 bp | GGCAGGAGAGATGGCTCAGCAGTTCAGAGCACTGGCTaGTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRRDGSAVQSTG*SSRGPEFNSQQ Trigger: TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTGAACTGCTGAGCCATCTCTCCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | TTCCCTGGAGCCCTGACGGAGCATCTGAGCGATCACTaGACACTTCCACTCCCCATAAGGCAAACTCTAACG | + |
|
Preference number: 3 (lower is better) Translates to: FPGALTEHLSDH*TLPLPIRQTLT Trigger: CGTTAGAGTTTGCCTTATGGGGAGTGGAAGTGTGCAGTGATCGCTCAGATGCTCCGTCAGGGCTCCAGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR CCA 72 bp | CAAGGCAGCAGGGTTCATGTTGACAGAGCCCAGCTGTaGAGCAGGGAGACATTAAGCTGCCAACAGAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: QGSRVHVDRAQL*SRETLSCQQRP Trigger: TGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAACATGAACCCTGCTGCCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | TTCCATCACAACCTGACAGAGCAGTCTGTGTGTCTCTaGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FHHNLTEQSVCL*KLCPQPVSWGS Trigger: AGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACAGCAGAGTGGCTACATCCTTCCTCTGGAATGGCAACGGGAGGCAGGTGTACATCTTCATCTAACTTaGAAGCACAGTCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PQQSGYILPLEWQREAGVHLHLT*KHSPRR Trigger: CCTCCTGGGACTGTGCTTCAAAGTTAGATGAAGATG...TACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTGAGGAGGAAGCAACCACTTaGCTCAAAGTCCCTGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLLGSDSWSAFLSVMGGEEEATT*LKVPAV Trigger: CACTGCAGGGACTTTGAGCAAAGTGGTTGCTTCCTC...CTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTGAGCCAAGGCCTGACCTTTaGAGTTTCCATGGAGACATC | + |
|
Preference number: 3 (lower is better) Translates to: VLLGSDSWSAFLSVMGGEPRPDL*SFHGDI Trigger: GATGTCTCCATGGAAACTCAAAAGGTCAGGCCTTGG...CTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | TCAAGACCAGCCTGCACAGATAGTTCGAAGCCAAGCTaGGCTACAGGAGATGCTGCCTCACAACACAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: SRPACTDSSKPS*ATGDAASQHKQ Trigger: TTGTTTGTGTTGTGAGGCAGCATCTCCTGTAGCCCAGCTTGGCTTCGAACTATCTGTGCAGGCTGGTCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | CCTTTGTTAAAAACATCCAGAATGGGGCAGGAGAGATaGCTCAGCAGTTCAGAGCACTGGCTGCTCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PLLKTSRMGQER*LSSSEHWLLFQ Trigger: CTGGAAGAGCAGCCAGTGCTCTGAACTGCTGAGCCATCTCTCCTGCCCCATTCTGGATGTTTTTAACAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | ACCACTATGCTGGCATGTGACTGGGCAAAAATGGTCTaGTCTAATGCTGTGGTTTGGGTGGGATGCCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTMLACDWAKMV*SNAVVWVGCQV Trigger: CACTTGGCATCCCACCCAAACCACAGCATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | CTCAGGTGGCCAAGCTTTGTGACAAGCACCTTTACCTaGTGTGCCATCTTGTCAGTTCCTTCCCCATACTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRWPSFVTSTFT*CAILSVPSPYF Trigger: AAAGTATGGGGAAGGAACTGACAAGATGGCACAGCAGGTAAAGGTGCTTGTCACAAAGCTTGGCCACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | TCCATGGAGACATCACACGAAGGAACAGCTGAAACCTaGACCACTATGCTGGCATGTGACTGGGCAAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SMETSHEGTAET*TTMLACDWAKM Trigger: CATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | GCCGGGAGCAGCAGTTCAGTATCTGTTAGTCTAATGTaGACTAGTAGTGACCATAAGAGCGGTAGCTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AGSSSSVSVSLM*TSSDHKSGSYS Trigger: GCTGTAGCTACCGCTCTTATGGTCACTACTAGTCCACATTAGACTAACAGATACTGAACTGCTGCTCCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR TCA 72 bp | CCATGGGTGAAAACCAGTATGTATTCCATCACAACCTaGCAGAGCAGTCTGTGTGTCTCTGGAAGCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PWVKTSMYSITT*QSSLCVSGSSV Trigger: GACAGAGCTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAATACATACTGGTTTTCACCCATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | TCTGTATTAAATGTTTTCGATCACACAGCAGGCACCTaGGTACCCGCCGGGAGCAGCAGTTCAGTATCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVLNVFDHTAGT*VPAGSSSSVSV Trigger: AACAGATACTGAACTGCTGCTCCCGGCGGGTACTCAGGTGCCTGCTGTGTGATCGAAAACATTTAATACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR CCA 72 bp | CACACGAAGGAACAGCTGAAACCTGGACCACTATGCTaGCATGTGACTGGGCAAAAATGGTCTGATCTAATG | + |
|
Preference number: 3 (lower is better) Translates to: HTKEQLKPGPLC*HVTGQKWSDLM Trigger: CATTAGATCAGACCATTTTTGCCCAGTCACATGCCAGCATAGTGGTCCAGGTTTCAGCTGTTCCTTCGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAGTGAGGTCTGGAAATTACTCAGTTTGCTTCCTTGCTGGTAAGGGGCAACATCTTCATCTAACTTaGAAGCACAGTCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQVRSGNYSVCFLAGKGQHLHLT*KHSPRR Trigger: CCTCCTGGGACTGTGCTTCAAAGTTAGATGAAGATG...TTGCCCCTTACCAGCAAGGAAGCAAACTGAGTAATTTCCAGACCTCACTTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR-3UTR CAA 90 bp | CGCCTGAGCTTCATAGTGAACTGTAGACCACTCTCGGCTGTACAGAGAACCAGTAAGAATAAACTGGGTTaGCTGAATATACCTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RLSFIVNCRPLSAVQRTSKNKLG*LNIPEG Trigger: GCCTTCAGGTATATTCAGCAAACCCAGTTTATTCTT...ACTGGTTCTCTGTACAGCCGAGAGTGGTCTACAGTTCACTATGAAGCTCAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | TCTGATCTAATGCTGTGGTTTGGGTGGGATGCCAAGTaGGGTCTGGAAATTACTCAGTTTGCTTCCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SDLMLWFGWDAK*GLEITQFASLL Trigger: CAGCAAGGAAGCAAACTGAGTAATTTCCAGACCTCACTTGGCATCCCACCCAAACCACAGCATTAGATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | TCTGACTGTCTGAAAACTCTCCAAGGCCTGACCTTTTaGGTTTCCATGGAGACATCACACGAAGGAACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SDCLKTLQGLTF*VSMETSHEGTA Trigger: AGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGGTCAGGCCTTGGAGAGTTTTCAGACAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | CTCCCTGTCAGTACATGGCTCGGTTACCCATTCAGTTaGTTAAGCCTAAAATATCTCAGCGTCATCCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPVSTWLGYPFS*LSLKYLSVILG Trigger: ACCAAGGATGACGCTGAGATATTTTAGGCTTAAGCAACTGAATGGGTAACCGAGCCATGTACTGACAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR CCA 72 bp | AAATTCCTCATTCTTGTGCTGCTGGGTTCTGATTCCTaGTCTGCATTTTTGTCTGTCATGGGAGGTGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: KFLILVLLGSDS*SAFLSVMGGEE Trigger: CTCCTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR TCA 72 bp | TCTGCAATGGGATCCGATGCTCTCTTCTGGTGTGTCTaGAGACAGCGACAAAAACCCAACAAAACTCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SAMGSDALFWCV*RQRQKPNKTLE Trigger: TTCTAGAGTTTTGTTGGGTTTTTGTCGCTGTCTTCAGACACACCAGAAGAGAGCATCGGATCCCATTGCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | TCCACGTGGACAAAGGAAAATTCCTCATTCTTGTGCTaGTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: STWTKENSSFLC*WVLIPGLHFCL Trigger: CAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR GCA 72 bp | ATTTCTACGTATTTGTCCTGGAGTCAATCAAGCCTGTaGAATGAGGTCCCCATAAAAATTCCAAGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ISTYLSWSQSSL*NEVPIKIPRVG Trigger: CCCCACCCTTGGAATTTTTATGGGGACCTCATTGCACAGGCTTGATTGACTCCAGGACAAATACGTAGAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | ACGTGGACAAAGGAAAATTCCTCATTCTTGTGCTGCTaGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TWTKENSSFLCC*VLIPGLHFCLS Trigger: TGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CCA 72 bp | GTCTTTGGGTCTGGTTTTATTTCTACGTATTTGTCCTaGAGTCAATCAAGCCTGTGCAATGAGGTCCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: VFGSGFISTYLS*SQSSLCNEVPI Trigger: TATGGGGACCTCATTGCACAGGCTTGATTGACTCCAGGACAAATACGTAGAAATAAAACCAGACCCAAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR CCA 72 bp | GCAATCTTTGGGTCTTTGGATCACAGTCTTTGGGTCTaGTTTTATTTCTACGTATTTGTCCTGGAGTCAATC | + |
|
Preference number: 3 (lower is better) Translates to: AIFGSLDHSLWV*FYFYVFVLESI Trigger: GATTGACTCCAGGACAAATACGTAGAAATAAAACCAGACCCAAAGACTGTGATCCAAAGACCCAAAGATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| CDS-3UTR GCA 90 bp | CCTCCAAACACTGCCACAGCCGTGCTCCCTGGAGCCACACGCTCTTGCCTGTGCTCACTGAAGCCCTGCTaGGGTGTCAGCTGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPNTATAVLPGATRSCLCSLKPC*GVSWEG Trigger: GCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGA...GCACAGGCAAGAGCGTGTGGCTCCAGGGAGCACGGCTGTGGCAGTGTTTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | CACTGCCACAGCCGTGCTCCCTGGAGCCACACGCTCTaGCCTGTGCCTCTCAACCACCAGTGGTTAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HCHSRAPWSHTL*PVPLNHQWLVR Trigger: CCTGACTAACCACTGGTGGTTGAGAGGCACAGGCAAGAGCGTGTGGCTCCAGGGAGCACGGCTGTGGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTTCACTGAAGCCCTGCTaGGGTGTCAGCTGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSVPNLCPGALRVPVLSLKPC*GVSWEG Trigger: GCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGA...AAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCACTGAAGCCCTGCTaGGGTGTCAGCTGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLCPQPVSWGSQSPSSSNSLKPC*GVSWEG Trigger: GCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGA...GTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACGGTGTAGTGCACAGTTaGAGGGGGCTTGGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPVSWGSQSPSSSNSEAHGVVHS*RGLGTV Trigger: CACCGTTCCAAGCCCCCTGCAACTGTGCACTACACC...GTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCTCCGGGGACCACTCCTaGATCAGAGTGTCAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCLWKLCPQPVSWGSQSPSGDHS*IRVSMS Trigger: CGACATTGACACTCTGATGCAGGAGTGGTCCCCGGA...GGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTGCTGCGGTGTCAGCTaGGAGGGCTTCTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLEALSPTCVLGLSESQFCCGVS*EGFFFS Trigger: GGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCA...GAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACTGCTGCGGTGTCAGCTaGGAGGGCTTCTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLSESQFFQLRGPQQSGYCCGVS*EGFFFS Trigger: GGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCA...GTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGGGTGTAGTGCACAGTTaGAGGGGGCTTGGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSSSNSEAHSRVATSFLWGVVHS*RGLGTV Trigger: CACCGTTCCAAGCCCCCTGCAACTGTGCACTACACC...CCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCATCCGGGGACCACTCCTaGATCAGAGTGTCAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PTCVLGLSESQFFQLRGPSGDHS*IRVSMS Trigger: CGACATTGACACTCTGATGCAGGAGTGGTCCCCGGA...TGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGATGCTGCGGTGTCAGCTaGGAGGGCTTCTTCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PVLPTQRPTAEWLHPSSGCCGVS*EGFFFS Trigger: GGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCA...TCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAACCAAGAGGCCAAGGTaGTCAGGCTTTCCATCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLCVSGSSVPNLCPGALRTKRPR*SGFPSG Trigger: TCCCGATGGAAAGCCTGACCACCTTGGCCTCTTGGT...TCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGTTGCAGGGGGCTTaGAACGGTGTAACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTCVLGLSESQFFQLRGPQLQGA*NGVTQR Trigger: TCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTG...TGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAATGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: EALSPTCVLGLSESQFFQCQCRA*AWCSAQ Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...TTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCAATCGATCTCGACAGTaGGCAGACTCACCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNLCPGALRVPVLPTQRPNRSRQ*ADSPFP Trigger: TGGGAAAGGTGAGTCTGCCCACTGTCGAGATCGATT...GGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LRVPVLPTQRPTAEWLHPCQCRA*AWCSAQ Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...AGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAACAGAGACCACATCTTCATCCGGGGACCACTCCTaGATCAGAGTGTCAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SPAVEQGDIKLPTETTSSSGDHS*IRVSMS Trigger: CGACATTGACACTCTGATGCAGGAGTGGTCCCCGGA...TGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTGACAGAGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAACAGAGAACCAAGAGGCCAAGGTaGTCAGGCTTTCCATCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVDRAQLWSRETLSCQQRTKRPR*SGFPSG Trigger: TCCCGATGGAAAGCCTGACCACCTTGGCCTCTTGGT...TCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGACAGTTGCAGGGGGCTTaGAACGGTGTAACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVLPTQRPTAEWLHPSSGQLQGA*NGVTQR Trigger: TCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTG...TCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACAATGCTGGGAGTTCTTaGACTCTGAGTAGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSESQFFQLRGPQQSGYNAGSS*TLSRGK Trigger: TTTCCCTCTACTCAGAGTTCAAGAACTCCCAGCATT...GTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCGGTGTAACTCAGAGATaGTCTCAATCCAGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCVSGSSVPNLCPGALRVGVTQR*SQSRCQ Trigger: TTGACACCTGGATTGAGAGCATCTCTGAGTTACACC...GACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTAATCGATCTCGACAGTaGGCAGACTCACCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVPVLPTQRPTAEWLHPNRSRQ*ADSPFP Trigger: TGGGAAAGGTGAGTCTGCCCACTGTCGAGATCGATT...AGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR TCA 90 bp | AGTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAAATGCTGGGAGTTCTTaGACTCTGAGTAGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLCVSGSSVPNLCPGALRNAGSS*TLSRGK Trigger: TTTCCCTCTACTCAGAGTTCAAGAACTCCCAGCATT...TCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR TCA 90 bp | CCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAATGGCAACGAATGCTGGGAGTTCTTaGACTCTGAGTAGAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PTQRPTAEWLHPSSGMATNAGSS*TLSRGK Trigger: TTTCCCTCTACTCAGAGTTCAAGAACTCCCAGCATT...CGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTTTTGGGATTCTTCTCTaGATCCTCCAGGCTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSVPNLCPGALRVPVLFGILL*ILQALY Trigger: GTAAAGAGCCTGGAGGATGCAGAGAAGAATCCCAAA...AAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAATGGCAACGGGTGTAACTCAGAGATaGTCTCAATCCAGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTQRPTAEWLHPSSGMATGVTQR*SQSRCQ Trigger: TTGACACCTGGATTGAGAGCATCTCTGAGTTACACC...CGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAAGGTGTAACTCAGAGATaGTCTCAATCCAGGTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EALSPTCVLGLSESQFFQGVTQR*SQSRCQ Trigger: TTGACACCTGGATTGAGAGCATCTCTGAGTTACACC...TTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | TTTCATGAAAGATGGTCAAAGGATGCAGGTGAAGGGGTGAACAGTGGGCACGGTACCAAGAGGCCAAGGTaGTCAGGCTTTCCATCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHERWSKDAGEGVNSGHGTKRPR*SGFPSG Trigger: TCCCGATGGAAAGCCTGACCACCTTGGCCTCTTGGT...ACCGTGCCCACTGTTCACCCCTTCACCTGCATCCTTTGACCATCTTTCATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAAAGGTGTCAATGGCTTTaGGATTCTTCTCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EALSPTCVLGLSESQFFQRCQWL*DSSLHP Trigger: AGGATGCAGAGAAGAATCCCAAAGCCATTGACACCT...TTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAAGGTGTCAATGGCTTTaGGATTCTTCTCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLCVSGSSVPNLCPGALRRCQWL*DSSLHP Trigger: AGGATGCAGAGAAGAATCCCAAAGCCATTGACACCT...TCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACACAGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CGCCTGAGCTTCATAGTGAACTGTAGACCACTCTCGGCTGTACAGAGAACCAGTCAGTTGCAGGGGGCTTaGAACGGTGTAACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLSFIVNCRPLSAVQRTSQLQGA*NGVTQR Trigger: TCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTG...ACTGGTTCTCTGTACAGCCGAGAGTGGTCTACAGTTCACTATGAAGCTCAGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAACAGAGACCACATCTTCAAATCGATCTCGACAGTaGGCAGACTCACCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPAVEQGDIKLPTETTSSNRSRQ*ADSPFP Trigger: TGGGAAAGGTGAGTCTGCCCACTGTCGAGATCGATT...TGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | TCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGTTTGGGATTCTTCTCTaGATCCTCCAGGCTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQFFQLRGPQQSGYILPLFGILL*ILQALY Trigger: GTAAAGAGCCTGGAGGATGCAGAGAAGAATCCCAAA...CAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAAGGTGTCAATGGCTTTaGGATTCTTCTCTGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVLPTQRPTAEWLHPSSGRCQWL*DSSLHP Trigger: AGGATGCAGAGAAGAATCCCAAAGCCATTGACACCT...TCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CCA 90 bp | TCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCAGAGCTTTAAAATGCTaGGAGTTCTTGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLEALSPTCVLGLSESQFRALKC*EFLNSE Trigger: CTCAGAGTTCAAGAACTCCCAGCATTTTAAAGCTCT...GAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | GTGTGTCTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCTGCGTAATATTATGCTaGTTGGAATTCTCTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCLWKLCPQPVSWGSQSPCVILC*LEFSVN Trigger: GTTAACAGAGAATTCCAAGCAGCATAATATTACGCA...GGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAGACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCTGTTGCGTAATATTATaGTGCTTGGAATTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQPVSWGSQSPSSSNSEACCVIL*CLEFSV Trigger: AACAGAGAATTCCAAGCAGCATAATATTACGCAACA...GGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTTCATGTTGACAGAGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAATTTGGGATTCTTCTCTaGATCCTCCAGGCTCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RVHVDRAQLWSRETLSCQFGILL*ILQALY Trigger: GTAAAGAGCCTGGAGGATGCAGAGAAGAATCCCAAA...TTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAACATGAACCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | GGAGACATTAAGCTGCCAACAGAGACCACATCTTCATCTAACTTTGAAGCACAGGGTGTAGTGCACAGTTaGAGGGGGCTTGGAACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDIKLPTETTSSSNFEAQGVVHS*RGLGTV Trigger: CACCGTTCCAAGCCCCCTGCAACTGTGCACTACACC...CTGTGCTTCAAAGTTAGATGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTGTTGCGTAATATTATaGTGCTTGGAATTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LWKLCPQPVSWGSQSPSSCCVIL*CLEFSV Trigger: AACAGAGAATTCCAAGCAGCATAATATTACGCAACA...AGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CCA 90 bp | AGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCAGAGCTTTAAAATGCTaGGAGTTCTTGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RVPVLPTQRPTAEWLHPSRALKC*EFLNSE Trigger: CTCAGAGTTCAAGAACTCCCAGCATTTTAAAGCTCT...GGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGAGAGCTTTAAAATGCTaGGAGTTCTTGAACTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFFQLRGPQQSGYILPLRALKC*EFLNSE Trigger: CTCAGAGTTCAAGAACTCCCAGCATTTTAAAGCTCT...CAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | TCTAGAACGGTTTCAGGTTTCCTGGCTGGGAACCAGTaGATACCACTCCAAATTGCTCCTGAATCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTVSGFLAGNQ*IPLQIAPESLL Trigger: GAGGAGAGATTCAGGAGCAATTTGGAGTGGTATCAACTGGTTCCCAGCCAGGAAACCTGAAACCGTTCTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGGAATGGGATATCCCCAACAGCTaGGATAAAATCAGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: FFQLRGPQQSGYILPLEWDIPNS*DKIRNE Trigger: TTCATTCCTGATTTTATCCCAGCTGTTGGGGATATC...CCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | GAGACATTAAGCTGCCAACAGAGACCACATCTTCATCTAACTTTGAAGCACAGTTGTCAATGTCGGGCATaGGCCTGGTGTAGTGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ETLSCQQRPHLHLTLKHSCQCRA*AWCSAQ Trigger: CTGTGCACTACACCAGGCCCATGCCCGACATTGACA...ACTGTGCTTCAAAGTTAGATGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | AGAGCTTCCACGTGGACAAAGGAAAATTCCTCATTCTaGTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RASTWTKENSSF*CCWVLIPGLHF Trigger: AAAATGCAGACCAGGAATCAGAACCCAGCAGCACAAGAATGAGGAATTTTCCTTTGTCCACGTGGAAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCTGGGTTCTGATTCCTGGTCTGCATTTTTGTCTGTCATGGGAGGTGAGTGTTGCGTAATATTATaGTGCTTGGAATTCTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLGSDSWSAFLSVMGGECCVIL*CLEFSV Trigger: AACAGAGAATTCCAAGCAGCATAATATTACGCAACA...CTCACCTCCCATGACAGACAAAAATGCAGACCAGGAATCAGAACCCAGCAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | AGCTTTGTGACAAGCACCTTTACCTGCTGTGCCATCTaGTCAGTTCCTTCCCCATACTTTTGTCACCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SFVTSTFTCCAI*SVPSPYFCHQI Trigger: AATTTGGTGACAAAAGTATGGGGAAGGAACTGACAAGATGGCACAGCAGGTAAAGGTGCTTGTCACAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | ATCACAGTCTTTGGGTCTGGTTTTATTTCTACGTATTaGTCCTGGAGTCAATCAAGCCTGTGCAATGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITVFGSGFISTY*SWSQSSLCNEV Trigger: GACCTCATTGCACAGGCTTGATTGACTCCAGGACAAATACGTAGAAATAAAACCAGACCCAAAGACTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| CDS-3UTR GCA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCATGCGTAATATTATGCTaGTTGGAATTCTCTGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPCVILC*LEFSVN Trigger: GTTAACAGAGAATTCCAAGCAGCATAATATTACGCA...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGGAGACATTAAGCTGCCAACAGAGACCACATCTTCATCTAACTTTGAAGATATCCCCAACAGCTaGGATAAAATCAGGAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQGDIKLPTETTSSSNFEDIPNS*DKIRNE Trigger: TTCATTCCTGATTTTATCCCAGCTGTTGGGGATATC...TTCAAAGTTAGATGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | CTGCTGTGCCATCTTGTCAGTTCCTTCCCCATACTTTaGTCACCAAATTGTTGTGTTAAATGTCCTTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LLCHLVSSFPIL*SPNCCVKCPLL Trigger: TAACAAAGGACATTTAACACAACAATTTGGTGACAAAAGTATGGGGAAGGAACTGACAAGATGGCACAGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
||
| 3UTR CAA 72 bp | CATCTTAGCAATCTTTGGGTCTTTGGATCACAGTCTTaGGGTCTGGTTTTATTTCTACGTATTTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLSNLWVFGSQS*GLVLFLRICPG Trigger: TCCAGGACAAATACGTAGAAATAAAACCAGACCCAAAGACTGTGATCCAAAGACCCAAAGATTGCTAAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| 3UTR CAA 72 bp | ATGGACCCCTTCATGAATTTCCACATCACATTATCCTaGTGTAGGGACCATGCCAGTCTTTTCTGTATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MDPFMNFHITLS*CRDHASLFCIK Trigger: TTTAATACAGAAAAGACTGGCATGGTCCCTACACAAGGATAATGTGATGTGGAAATTCATGAAGGGGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002099.11 |
||
| CDS-3UTR CAA 90 bp | CCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCTGGTGTAGTGCACAGTaGCAGGGGGCTTGGAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: PNLCPGALRVPVLPTQRPWCSAQ*QGAWNG Trigger: ACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCA...GGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGCAGAGTGGCTACATCCTTCCTCTGGAATGGCAACGGGAGGCAGGTGTATGGTGTAGTGCACAGTaGCAGGGGGCTTGGAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: PQQSGYILPLEWQREAGVWCSAQ*QGAWNG Trigger: ACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCA...TACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | AAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACACAGTTGCAGGGGGCTaGGAACGGTGTAACTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KLCPQPVSWGSQSPSSSNTVAGG*ERCNSE Trigger: CTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGT...GTTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | GAGATGGCTCAGCAGTTCAGAGCACTGGCTGCTCTTCCAGAGGTCCTGAGTTCATGGTGTAGTGCACAGTaGCAGGGGGCTTGGAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: EMAQQFRALAALPEVLSSWCSAQ*QGAWNG Trigger: ACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCA...TGAACTCAGGACCTCTGGAAGAGCAGCCAGTGCTCTGAACTGCTGAGCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | TCAGCCATCGTCTTGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTTaGTGTCCTGGGGTTGGAGTGCTAATACTGGCAACCTCTTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAIVLLGRAAEKGGP*CPGVGVLILATSSE Trigger: CTCGGAAGAGGTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CCA 90 bp | CAATGTCGGGCATGGGCCTGGTGTAGTGCACAGTTGCAGGGGGCTTaGAACGGTGTAACTCAGAGATGCTCTCAATCCAGGTGTCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: QCRAWAWCSAQLQGA*NGVTQRCSQSRCQW Trigger: CCATTGACACCTGGATTGAGAGCATCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCAGGCCCATGCCCGACATTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 90 bp | TGTCCTCCTCGTACTCGTCACTGCTGTTATCAGCCATCGTCTTGTTaGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGTCCTGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPPRTRHCCYQPSSC*EERQKKEGLAVLGL Trigger: CAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGAGGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS GCA 90 bp | GAGGAGTCATCGTCGTCATCATCATCGTTCTCACTGAAGCCCTGCTaGGGTGTCAGCTGGGAGGGCTTCTTCTTCTCCTTATTGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EESSSSSSSFSLKPC*GVSWEGFFFSLLSS Trigger: GGAGGACAATAAGGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGACGATGACTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | GAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTCCAACAGGTGTCAATGGCTTaGGGATTCTTCTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: EALSPTCVLGLSESQFFQQVSMA*GFFSAS Trigger: GGATGCAGAGAAGAATCCCAAAGCCATTGACACCTG...TTGGAAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | TCAGAGGAGTCATCGTCGTCATCATCATCGTTCTCACTGAAGCCCTaGTGCGGTGTCAGCTGGGAGGGCTTCTTCTTCTCCTTATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SEESSSSSSSFSLKP*CGVSWEGFFFSLLS Trigger: GGACAATAAGGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGACGATGACTCCTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | GAATGTCCAGGATCGCACAGATCATGTCAATGTACTCAGCCAGGCTaGAATCGATCTCGACAGTGGGCAGACTCACCTTTCCCAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ECPGSHRSCQCTQPG*NRSRQWADSPFPGA Trigger: AGCTCCTGGGAAAGGTGAGTCTGCCCACTGTCGAGATCGATTGCAGCCTGGCTGAGTACATTGACATGATCTGTGCGATCCTGGACATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 90 bp | TCGTCATCATCATCGTTCTCACTGAAGCCCTGCTGCGGTGTCAGCTaGGAGGGCTTCTTCTTCTCCTTATTGTCCTCCTCGTACTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSSSSFSLKPCCGVS*EGFFFSLLSSSYSS Trigger: TGACGAGTACGAGGAGGACAATAAGGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 90 bp | CGTCTTGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGTCCTaGGGTTGGAGTGCTAATACTGGCAACCTCTTCCGAGTCGTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLVGKSGRKRRALLS*GWSANTGNLFRVVN Trigger: ATTAACGACTCGGAAGAGGTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGAGTGGCTACATCCTTCCTCTGGAATGGCAACGGGAGGCAGGTGTAAACCAGGTGTCAATGGCTTaGGGATTCTTCTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QQSGYILPLEWQREAGVNQVSMA*GFFSAS Trigger: GGATGCAGAGAAGAATCCCAAAGCCATTGACACCTG...GTTTACACCTGCCTCCCGTTGCCATTCCAGAGGAAGGATGTAGCCACTCTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | GGGCTCTCAGAGTCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACGGGGTGAATACTTTTTaGCCTTCAGCAAGAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: GLSESQFFQLRGPQQSGYGVNTF*PSARAL Trigger: TAAAGCTCTTGCTGAAGGCAAAAAAGTATTCACCCC...GTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGACTCTGAGAGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | GGGAGGGCTTCTTCTTCTCCTTATTGTCCTCCTCGTACTCGTCACTaGTGTTATCAGCCATCGTCTTGTTGGGAAGAGCGGCAGAAAAAG | + |
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Preference number: 5 (lower is better) Translates to: GRASSSPYCPPRTRH*CYQPSSCWEERQKK Trigger: CTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGAGGACAATAAGGAGAAGAAGAAGCCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CCA 90 bp | TCCGACTGCTTTGTCGATGGTTCATCTAACACCAAGAGGCCAAGGTaGTCAGGCTTTCCATCGGGACGTGGCACCTTTAAAAATGCATCG | + |
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Preference number: 5 (lower is better) Translates to: SDCFVDGSSNTKRPR*SGFPSGRGTFKNAS Trigger: CGATGCATTTTTAAAGGTGCCACGTCCCGATGGAAAGCCTGACCACCTTGGCCTCTTGGTGTTAGATGAACCATCGACAAAGCAGTCGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | TCCCAGTTCTTCCAACTCAGAGGCCCACAGCAGAGTGGCTACATCCTTCCTCTGTTCTTCTTCTCCTTATaGTCCTCCTCGTACTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SQFFQLRGPQQSGYILPLFFFSL*SSSYSS Trigger: TGACGAGTACGAGGAGGACAATAAGGAGAAGAAGAA...CAGAGGAAGGATGTAGCCACTCTGCTGTGGGCCTCTGAGTTGGAAGAACTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTGAGTTTCCATGGAGACATCACACGAAGGAACAGCTGAAACCTGGACCAACAGTTGCAGGGGGCTaGGAACGGTGTAACTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PFEFPWRHHTKEQLKPGPTVAGG*ERCNSE Trigger: CTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGT...TGGTCCAGGTTTCAGCTGTTCCTTCGTGTGATGTCTCCATGGAAACTCAAAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | TTGGAATTCTCTGTTAACCACAGCGAAAGCACGGTAGGGTCCGACTaGTTTGTCGATGGTTCATCTAACACCAAGAGGCCAAGGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LEFSVNHSESTVGSD*FVDGSSNTKRPRWS Trigger: TGACCACCTTGGCCTCTTGGTGTTAGATGAACCATCGACAAAGCAGTCGGACCCTACCGTGCTTTCGCTGTGGTTAACAGAGAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | TGTAGTGCACAGTTGCAGGGGGCTTGGAACGGTGTAACTCAGAGATaGTCTCAATCCAGGTGTCAATGGCTTTGGGATTCTTCTCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSAQLQGAWNGVTQR*SQSRCQWLWDSSLH Trigger: ATGCAGAGAAGAATCCCAAAGCCATTGACACCTGGATTGAGAGCATCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGTGCACTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | CTCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTGTAATATTATGCTGCTaGGAATTCTCTGTTAACCAC | + |
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Preference number: 5 (lower is better) Translates to: LWKLCPQPVSWGSQSPSSVILCC*EFSVNH Trigger: GTGGTTAACAGAGAATTCCAAGCAGCATAATATTAC...AGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | AACCAGTATGTATTCCATCACAACCTGACAGAGCAGTCTGTGTGTCTCTGGAAGACAGTTGCAGGGGGCTaGGAACGGTGTAACTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: NQYVFHHNLTEQSVCLWKTVAGG*ERCNSE Trigger: CTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGT...CTTCCAGAGACACACAGACTGCTCTGTCAGGTTGTGATGGAATACATACTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | GTTGACAGAGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAACAGAGACCAGGGGTGAATACTTTTTaGCCTTCAGCAAGAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: VDRAQLWSRETLSCQQRPGVNTF*PSARAL Trigger: TAAAGCTCTTGCTGAAGGCAAAAAAGTATTCACCCC...TGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | TCTGGAAGCTCTGTCCCCAACCTGTGTCCTGGGGCTCTCAGAGTCCCAGTTCTTGTAATATTATGCTGCTaGGAATTCTCTGTTAACCAC | + |
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Preference number: 5 (lower is better) Translates to: SGSSVPNLCPGALRVPVLVILCC*EFSVNH Trigger: GTGGTTAACAGAGAATTCCAAGCAGCATAATATTAC...AAGAACTGGGACTCTGAGAGCCCCAGGACACAGGTTGGGGACAGAGCTTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | CATGTTGACAGAGCCCAGCTGTGGAGCAGGGAGACATTAAGCTGCCAACAGAGAGTAATATTATGCTGCTaGGAATTCTCTGTTAACCAC | + |
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Preference number: 5 (lower is better) Translates to: HVDRAQLWSRETLSCQQRVILCC*EFSVNH Trigger: GTGGTTAACAGAGAATTCCAAGCAGCATAATATTAC...TCTCTGTTGGCAGCTTAATGTCTCCCTGCTCCACAGCTGGGCTCTGTCAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | TTTCATGAAAGATGGTCAAAGGATGCAGGTGAAGGGGTGAACAGTGGGCACGGTGGGGTGAATACTTTTTaGCCTTCAGCAAGAGCTTTA | + |
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Preference number: 5 (lower is better) Translates to: FHERWSKDAGEGVNSGHGGVNTF*PSARAL Trigger: TAAAGCTCTTGCTGAAGGCAAAAAAGTATTCACCCC...ACCGTGCCCACTGTTCACCCCTTCACCTGCATCCTTTGACCATCTTTCATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002099.11 ENSMUST00000239014.2 |
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| CDS TCA 90 bp | AAATCAGGAATGAAAGGTTTCAGTTTGTGGTCCAGATCGATCAACTaGGGTGTGTACCGGCTGATGTACTCAAAGAGCTCCTTGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KSGMKGFSLWSRSIN*GVYRLMYSKSSLIS Trigger: CGAGATCAAGGAGCTCTTTGAGTACATCAGCCGGTACACACCTCAGTTGATCGATCTGGACCACAAACTGAAACCTTTCATTCCTGATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGGGAGACATTAAGCTGCCAACAGAGACCACATCTTCATCTAACTTTGAATTCTTCTTCTCCTTATaGTCCTCCTCGTACTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQGDIKLPTETTSSSNFEFFFSL*SSSYSS Trigger: TGACGAGTACGAGGAGGACAATAAGGAGAAGAAGAA...TTCAAAGTTAGATGAAGATGTGGTCTCTGTTGGCAGCTTAATGTCTCCCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000239014.2 |
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| CDS GCA 90 bp | AGAGATGCTCTCAATCCAGGTGTCAATGGCTTTGGGATTCTTCTCTaGATCCTCCAGGCTCTTTACTTTCATATGTTGCGTAATATTATG | + |
|
Preference number: 5 (lower is better) Translates to: RDALNPGVNGFGILL*ILQALYFHMLRNIM Trigger: CATAATATTACGCAACATATGAAAGTAAAGAGCCTGGAGGATGCAGAGAAGAATCCCAAAGCCATTGACACCTGGATTGAGAGCATCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | TCGGCAGGATCATACGCCCCTTCCAGAGGTGCTCCATaGTCCTCATCGTCATCGTCGTCATCGGAATCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAGSYAPSRGAP*SSSSSSSSESV Trigger: GACGGATTCCGATGACGACGATGACGATGAGGAGCATGGAGCACCTCTGGAAGGGGCGTATGATCCTGCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | CTCGTAGTCGGCAGGATCATACGCCCCTTCCAGAGGTaGTCCATGCTCCTCATCGTCATCGTCGTCATCGGA | + |
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Preference number: 6 (lower is better) Translates to: LVVGRIIRPFQR*SMLLIVIVVIG Trigger: TCCGATGACGACGATGACGATGAGGAGCATGGAGCACCTCTGGAAGGGGCGTATGATCCTGCCGACTACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS TCA 72 bp | CAGAGGAGTCATCGTCGTCATCATCATCGTTCTCACTaGAGCCCTGCTGCGGTGTCAGCTGGGAGGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRSHRRHHHRSH*SPAAVSAGRAS Trigger: AGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGACGATGACTCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | TTTCCCAGGAGCTCTTCAAATTCCGGGGACCACTCCTaGATCAGAGTGTCAATGTCGGGCATGGGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPRSSSNSGDHS*IRVSMSGMGLV Trigger: CACCAGGCCCATGCCCGACATTGACACTCTGATGCAGGAGTGGTCCCCGGAATTTGAAGAGCTCCTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 72 bp | GCATGGGCCTGGTGTAGTGCACAGTTGCAGGGGGCTTaGAACGGTGTAACTCAGAGATGCTCTCAATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AWAWCSAQLQGA*NGVTQRCSQSR Trigger: CCTGGATTGAGAGCATCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCAGGCCCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CAA 72 bp | TGTCAATGTCGGGCATGGGCCTGGTGTAGTGCACAGTaGCAGGGGGCTTGGAACGGTGTAACTCAGAGATGC | + |
|
Preference number: 6 (lower is better) Translates to: CQCRAWAWCSAQ*QGAWNGVTQRC Trigger: GCATCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTGTGCACTACACCAGGCCCATGCCCGACATTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | TCATCGTCGTCATCATCATCGTTCTCACTGAAGCCCTaGTGCGGTGTCAGCTGGGAGGGCTTCTTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSSFSLKP*CGVSWEGFFFS Trigger: GGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGACGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | GTCTTGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTTaGTGTCCTGGGGTTGGAGTGCTAATACTGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: VLLGRAAEKGGP*CPGVGVLILAT Trigger: GGTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CCA 72 bp | AGCGGCAGAAAAAGGAGGGCCTTGCTGTCCTGGGGTTaGAGTGCTAATACTGGCAACCTCTTCCGAGTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SGRKRRALLSWG*SANTGNLFRVV Trigger: AACGACTCGGAAGAGGTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CAA 72 bp | CGTCTTGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTaGCTGTCCTGGGGTTGGAGTGCTAATACTGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RLVGKSGRKRRA*LSWGWSANTGN Trigger: GTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CAA 90 bp | ATCAGCCATCGTCTTGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTaGCTGTCCTGGGGTTGGAGTGCTAATACTGGCAACCTCTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: ISHRLVGKSGRKRRA*LSWGWSANTGNLFR Trigger: TCGGAAGAGGTTGCCAGTATTAGCACTCCAACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CAA 90 bp | TTGTCCTCCTCGTACTCGTCACTGCTGTTATCAGCCATCGTCTTGTaGGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGTCCTGGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSSSYSSLLLSAIVL*GRAAEKGGPCCPGV Trigger: AACCCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGAGGACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS GCA 72 bp | TCGTCGTCATCATCATCGTTCTCACTGAAGCCCTGCTaGGGTGTCAGCTGGGAGGGCTTCTTCTTCTCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSSFSLKPC*GVSWEGFFFSL Trigger: TAAGGAGAAGAAGAAGCCCTCCCAGCTGACACCGCAGCAGGGCTTCAGTGAGAACGATGATGATGACGACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000125877.8 ENSMUST00000151905.8 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 72 bp | CGTACTCGTCACTGCTGTTATCAGCCATCGTCTTGTTaGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RTRHCCYQPSSC*EERQKKEGLAV Trigger: GACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CAA 72 bp | TCCTCGTACTCGTCACTGCTGTTATCAGCCATCGTCTaGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSYSSLLLSAIV*LGRAAEKGGPC Trigger: GCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CAA 90 bp | TTATTGTCCTCCTCGTACTCGTCACTGCTGTTATCAGCCATCGTCTaGTTGGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LLSSSYSSLLLSAIV*LGRAAEKGGPCCPG Trigger: CCCAGGACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGAGGACAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS GCA 72 bp | GGATCGCACAGATCATGTCAATGTACTCAGCCAGGCTaGAATCGATCTCGACAGTGGGCAGACTCACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GSHRSCQCTQPG*NRSRQWADSPF Trigger: GAAAGGTGAGTCTGCCCACTGTCGAGATCGATTGCAGCCTGGCTGAGTACATTGACATGATCTGTGCGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CAA 72 bp | TCGTACTCGTCACTGCTGTTATCAGCCATCGTCTTGTaGGGAAGAGCGGCAGAAAAAGGAGGGCCTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SYSSLLLSAIVL*GRAAEKGGPCC Trigger: ACAGCAAGGCCCTCCTTTTTCTGCCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS GCA 72 bp | TCTGTTAACCACAGCGAAAGCACGGTAGGGTCCGACTaGTTTGTCGATGGTTCATCTAACACCAAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SVNHSESTVGSD*FVDGSSNTKRP Trigger: TGGCCTCTTGGTGTTAGATGAACCATCGACAAAGCAGTCGGACCCTACCGTGCTTTCGCTGTGGTTAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | CAGTTGCAGGGGGCTTGGAACGGTGTAACTCAGAGATaGTCTCAATCCAGGTGTCAATGGCTTTGGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: QLQGAWNGVTQR*SQSRCQWLWDS Trigger: AGAATCCCAAAGCCATTGACACCTGGATTGAGAGCATCTCTGAGTTACACCGTTCCAAGCCCCCTGCAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS GCA 72 bp | TCTTCTTCTCCTTATTGTCCTCCTCGTACTCGTCACTaGTGTTATCAGCCATCGTCTTGTTGGGAAGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSPYCPPRTRH*CYQPSSCWEER Trigger: CCGCTCTTCCCAACAAGACGATGGCTGATAACAGCAGTGACGAGTACGAGGAGGACAATAAGGAGAAGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS CCA 72 bp | TTTGTCGATGGTTCATCTAACACCAAGAGGCCAAGGTaGTCAGGCTTTCCATCGGGACGTGGCACCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: FVDGSSNTKRPR*SGFPSGRGTFK Trigger: TTTAAAGGTGCCACGTCCCGATGGAAAGCCTGACCACCTTGGCCTCTTGGTGTTAGATGAACCATCGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 72 bp | GGTGTAACTCAGAGATGCTCTCAATCCAGGTGTCAATaGCTTTGGGATTCTTCTCTGCATCCTCCAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GVTQRCSQSRCQ*LWDSSLHPPGS Trigger: AGAGCCTGGAGGATGCAGAGAAGAATCCCAAAGCCATTGACACCTGGATTGAGAGCATCTCTGAGTTACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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| CDS CCA 72 bp | TCCGAGTCGTTAATCTCTAGACGCTCATCGTATGTCTaGTTCTCAACAATTTTGGTCTGTAGCCCCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SESLISRRSSYV*FSTILVCSPSG Trigger: TCCAGAGGGGCTACAGACCAAAATTGTTGAGAACCAGACATACGATGAGCGTCTAGAGATTAACGACTCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238800.2 |
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| CDS GCA 72 bp | AGGCTCTTTACTTTCATATGTTGCGTAATATTATGCTaGTTGGAATTCTCTGTTAACCACAGCGAAAGCACG | + |
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Preference number: 6 (lower is better) Translates to: RLFTFICCVILC*LEFSVNHSEST Trigger: CGTGCTTTCGCTGTGGTTAACAGAGAATTCCAAGCAGCATAATATTACGCAACATATGAAAGTAAAGAGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002099.11 ENSMUST00000118186.2 ENSMUST00000214854.3 ENSMUST00000238800.2 ENSMUST00000239014.2 |
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