Pregenerated sensors for IFT22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007987Ensembl transcript IDs: ENSMUST00000008131.10, ENSMUST00000199101.5, ENSMUST00000200153.5, ENSMUST00000200157.5
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGCACCATGCCTGATCTTCCTGGAGCCTTCTAGAGGAGAAGGGTaGGTCAGCGGCTGGGTGGGGTTAGTCAGCGTCCTTTGGGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: VAPCLIFLEPSRGEG*VSGWVGLVSVLWEA Trigger: CGCCTCCCAAAGGACGCTGACTAACCCCACCCAGCCGCTGACGCACCCTTCTCCTCTAGAAGGCTCCAGGAAGATCAGGCATGGTGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | AGCTGCCCAGTGTGGGTGCTGGGATCTGAACTCAGGACCTCAGCATaGGCAACAAGCACTCTGGACCGCAGATCCGTCTCTCCAGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: SCPVWVLGSELRTSA*ATSTLDRRSVSPAR Trigger: TCTGGCTGGAGAGACGGATCTGCGGTCCAGAGTGCTTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACACTGGGCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | ACATCACCTGTCTGCCTTAGGCCACTTCATCCCACTAAGCACCAGTaGACAGCTCAGCCTGAAAACACAGTGCTAGGGGCTGCCGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: TSPVCLRPLHPTKHQ*TAQPENTVLGAAGR Trigger: CCTTCCGGCAGCCCCTAGCACTGTGTTTTCAGGCTGAGCTGTTCACTGGTGCTTAGTGGGATGAAGTGGCCTAAGGCAGACAGGTGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | GTGCCTCAGTGTGTGTATGTGTGTGCACGTGCGTGTGTGCACACGTaGCTTCAGGAGCCCACTTCACGTTACTTATTAGGTCAGGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: VPQCVYVCARACVHT*LQEPTSRYLLGQGL Trigger: GAGGCCCTGACCTAATAAGTAACGTGAAGTGGGCTCCTGAAGGCACGTGTGCACACACGCACGTGCACACACATACACACACTGAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CCA 90 bp | AAAGCCCGAAAGCAGCAGCTTGATCACGTGTTCCCTCACTGCCCTTaGGGACAGCAGAGATCACATCACCTGTCTGCCTTAGGCCACTTC | + |
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Preference number: 1 (lower is better) Translates to: KARKQQLDHVFPHCP*GQQRSHHLSALGHF Trigger: GAAGTGGCCTAAGGCAGACAGGTGATGTGATCTCTGCTGTCCCCAAGGGCAGTGAGGGAACACGTGATCAAGCTGCTGCTTTCGGGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | GTGCTAGGGGCTGCCGGAAGGAAGGACATGTTTATGCATGACAACTaGGACAGGCAAGCAGGGCAGCTTTTTGCTTCTGGAGAAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: VLGAAGRKDMFMHDN*DRQAGQLFASGEGR Trigger: CCTCCCTTCTCCAGAAGCAAAAAGCTGCCCTGCTTGCCTGTCTCAGTTGTCATGCATAAACATGTCCTTCCTTCCGGCAGCCCCTAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CCA 90 bp | TGCTGGGATCTGAACTCAGGACCTCAGCATGAGCAACAAGCACTCTaGACCGCAGATCCGTCTCTCCAGCCAGATCCCTTTTACCATTCT | + |
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Preference number: 1 (lower is better) Translates to: CWDLNSGPQHEQQAL*TADPSLQPDPFYHS Trigger: AGAATGGTAAAAGGGATCTGGCTGGAGAGACGGATCTGCGGTCCAGAGTGCTTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | GGATCTCCTGGAACTAGAGTTACAATCATAGCTGCCCAGTGTGGGTaGTGGGATCTGAACTCAGGACCTCAGCATGAGCAACAAGCACTC | + |
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Preference number: 1 (lower is better) Translates to: GSPGTRVTIIAAQCG*WDLNSGPQHEQQAL Trigger: GAGTGCTTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACACTGGGCAGCTATGATTGTAACTCTAGTTCCAGGAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | CCACAACTATTTCTCTATGTATGTGCCTCAGTGTGTGTATGTGTGTaGACGTGCGTGTGTGCACACGTGCCTTCAGGAGCCCACTTCACG | + |
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Preference number: 1 (lower is better) Translates to: PQLFLYVCASVCVCV*TCVCAHVPSGAHFT Trigger: CGTGAAGTGGGCTCCTGAAGGCACGTGTGCACACACGCACGTGCACACACATACACACACTGAGGCACATACATAGAGAAATAGTTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CCA 90 bp | TCTCCTGGAACTAGAGTTACAATCATAGCTGCCCAGTGTGGGTGCTaGGATCTGAACTCAGGACCTCAGCATGAGCAACAAGCACTCTGG | + |
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Preference number: 1 (lower is better) Translates to: SPGTRVTIIAAQCGC*DLNSGPQHEQQALW Trigger: CCAGAGTGCTTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACACTGGGCAGCTATGATTGTAACTCTAGTTCCAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | AAACACAGTGCTAGGGGCTGCCGGAAGGAAGGACATGTTTATGCATaGCAACTGAGACAGGCAAGCAGGGCAGCTTTTTGCTTCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: KHSARGCRKEGHVYA*QLRQASRAAFCFWR Trigger: TCTCCAGAAGCAAAAAGCTGCCCTGCTTGCCTGTCTCAGTTGTCATGCATAAACATGTCCTTCCTTCCGGCAGCCCCTAGCACTGTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | CTATTTCTCTATGTATGTGCCTCAGTGTGTGTATGTGTGTGCACGTaGGTGTGTGCACACGTGCCTTCAGGAGCCCACTTCACGTTACTT | + |
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Preference number: 1 (lower is better) Translates to: LFLYVCASVCVCVCT*VCAHVPSGAHFTLL Trigger: AAGTAACGTGAAGTGGGCTCCTGAAGGCACGTGTGCACACACGCACGTGCACACACATACACACACTGAGGCACATACATAGAGAAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | ATGGCATTCCATCTGCTCTCTCTGCTTTGTGTTTGTAGTTCGGTATaGGACTCAGTTTCCTGTCCCTACAGCTACACCTGTCACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: MAFHLLSLLCVCSSV*DSVSCPYSYTCHLL Trigger: CAGCAAGTGACAGGTGTAGCTGTAGGGACAGGAAACTGAGTCTCATACCGAACTACAAACACAAAGCAGAGAGAGCAGATGGAATGCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | CATGTGTGTGTACATGAGTGTGAAGCCCAGAGGAGCCTTGGTAGTTaGTCATTCAGGCACCACAACTATTTCTCTATGTATGTGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: HVCVHECEAQRSLGS*SFRHHNYFSMYVPQ Trigger: CTGAGGCACATACATAGAGAAATAGTTGTGGTGCCTGAATGAGCAACTACCAAGGCTCCTCTGGGCTTCACACTCATGTACACACACATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR TCA 90 bp | TTGAGGAGTTATGTCAGCAGCAGTGGGCTTTCAGTGTTCAAAGACTaGTGGCATTCCATCTGCTCTCTCTGCTTTGTGTTTGTAGTTCGG | + |
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Preference number: 1 (lower is better) Translates to: LRSYVSSSGLSVFKD*WHSICSLCFVFVVR Trigger: CCGAACTACAAACACAAAGCAGAGAGAGCAGATGGAATGCCATCAGTCTTTGAACACTGAAAGCCCACTGCTGCTGACATAACTCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | CTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTaGAGGGAATGCAGAGCCCAGTCTTGGGAACTTTGTCACAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: LVTVNDSPTSYKTTN*RECRAQSWELCHSS Trigger: ACTACTGTGACAAAGTTCCCAAGACTGGGCTCTGCATTCCCTGCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CCA 90 bp | ACAAGTTACAAGACCACTAACTGCAGGGAATGCAGAGCCCAGTCTTaGGAACTTTGTCACAGTAGTTTCACCAGTGGATCTCATAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: TSYKTTNCRECRAQS*ELCHSSFTSGSHKY Trigger: ATACTTATGAGATCCACTGGTGAAACTACTGTGACAAAGTTCCCAAGACTGGGCTCTGCATTCCCTGCAGTTAGTGGTCTTGTAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR GCA 90 bp | TACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTTCTACGAGCTaGCTTGCCATGGTGTTTTATCACAGCAGCAGAAACGTGTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: YYFSETVSLIKSSTS*LAMVFYHSSRNVSN Trigger: ATTAGACACGTTTCTGCTGCTGTGATAAAACACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CAA 90 bp | GCTGACCCCAGAGCTGGCCTAGTCCAGCCCGGCCAGGCAGGCAGCTaGCCCCGGAGGTCGTACCTGAGCTTCTCTCAGGGATACAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ADPRAGLVQPGQAGS*PRRSYLSFSQGYRQ Trigger: CTGCCTGTATCCCTGAGAGAAGCTCAGGTACGACCTCCGGGGCAAGCTGCCTGCCTGGCCGGGCTGGACTAGGCCAGCTCTGGGGTCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GGATCTACCTGCCTCTGCCTCCCCGGTGCCAGGATCTTAGGACATGCCACAGTGAGGCTTGGCAGCAAGTaGGCCATCTCACTGTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GSTCLCLPGARILGHATVRLGSK*AISLSP Trigger: TGGGGACAGTGAGATGGCTCACTTGCTGCCAAGCCT...CACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | GAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCTTAGTCAGCGTCCTTTaGGAGGCGGTGGCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EISAPMQPGLALNSQPSSLVSVL*EAVALG Trigger: TCCCAGTGCCACCGCCTCCCAAAGGACGCTGACTAA...GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACTTAGTCAGCGTCCTTTaGGAGGCGGTGGCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: ISAPMQPGLALNSQPSSHLVSVL*EAVALG Trigger: TCCCAGTGCCACCGCCTCCCAAAGGACGCTGACTAA...GTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | CACACTTGTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCCCTTGGGCTCCCGGCTaGTGGCAGTTTCGGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HTCEHAECVRVGDRRTVCPWAPG*WQFRRF Trigger: AAACCTCCGAAACTGCCATCAGCCGGGAGCCCAAGG...GCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCACAAGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACAGCAGGGCAGCTTTTTaGTTCTGGAGAAGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ISAPMQPGLALNSQPSSHSRAAF*FWRREE Trigger: CTCCTCCCTTCTCCAGAAGCAAAAAGCTGCCCTGCT...GTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTTTATGCATGACAACTaGGACAGGCAAGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EEISAPMQPGLALNSQPSFMHDN*DRQAGQ Trigger: CTGCCCTGCTTGCCTGTCTCAGTTGTCATGCATAAA...GGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GGATCTACCTGCCTCTGCCTCCCCGGTGCCAGGATCTTAGGACATGCCACAGTGCTAATACGGTCTGTGTaGGCATATGCTGATGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSTCLCLPGARILGHATVLIRSV*AYADVG Trigger: TCCCACATCAGCATATGCTCACACAGACCGTATTAG...CACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GGATCTACCTGCCTCTGCCTCCCCGGTGCCAGGATCTTAGGACATGCCACAGTGTTGTGTTTGTGTGAATaGGATGGCCCTCAGAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSTCLCLPGARILGHATVLCLCE*DGPQSL Trigger: AAGGCTCTGAGGGCCATCTCATTCACACAAACACAA...CACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGGCTTGCCAGCACACACCATCCCCTGCTGAGCCATCTTACCAGCCTTGCATCACATCACCTGTCTaGCTTAGGCCACTTCATCCC | + |
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Preference number: 2 (lower is better) Translates to: CQACQHTPSPAEPSYQPCITSPV*LRPLHP Trigger: GGGATGAAGTGGCCTAAGGCAGACAGGTGATGTGAT...GCAAGGCTGGTAAGATGGCTCAGCAGGGGATGGTGTGTGCTGGCAAGCCTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | GAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCGGAAGGACATGTTTATaGATGACAACTGAGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: EISAPMQPGLALNSQPSSGRTCL*MTTETG Trigger: GCCTGTCTCAGTTGTCATGCATAAACATGTCCTTCC...GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CAA 90 bp | GTCCCCATTATTGATTCTTTGACAGCAAAGCCCGAAAGCAGCAGCTaGATCACGTGTTCCCTCACTGCCCTTGGGGACAGCAGAGATCAC | + |
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Preference number: 2 (lower is better) Translates to: VPIIDSLTAKPESSS*ITCSLTALGDSRDH Trigger: GTGATCTCTGCTGTCCCCAAGGGCAGTGAGGGAACACGTGATCAAGCTGCTGCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCAGGAGCTATGTTTGTGTTTGTGTaGATGAGATGGCCCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VNMLSVCVWGIGGQFAGAMFVFV*MRWPSE Trigger: CTCTGAGGGCCATCTCATTCACACAAACACAAACAT...AGCTCCTGCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | CACACTTGTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCGCAGCTTTTTGCTTCTaGAGAAGGGAGGAGATAAGC | + |
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Preference number: 2 (lower is better) Translates to: HTCEHAECVRVGDRRTVCAAFCF*RREEIS Trigger: GCTTATCTCCTCCCTTCTCCAGAAGCAAAAAGCTGC...GCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCACAAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | CACACTTGTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCGTGCCATGTTACCAGTaGAGACAGGACAACTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: HTCEHAECVRVGDRRTVCVPCYQ*RQDNSV Trigger: TACAGAGTTGTCCTGTCTCCACTGGTAACATGGCAC...GCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCACAAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CAA 90 bp | GCTTGGCAGCAAGTGAGCCATCTCACTGTCCCCATTATTGATTCTTaGACAGCAAAGCCCGAAAGCAGCAGCTTGATCACGTGTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: AWQQVSHLTVPIIDS*TAKPESSSLITCSL Trigger: GAGGGAACACGTGATCAAGCTGCTGCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGGGACAGTGAGATGGCTCACTTGCTGCCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | CTCACTGTCCCCATTATTGATTCTTTGACAGCAAAGCCCGAAAGCAGCAGCTTGAGGTGTGTGGCACCATaGCTGATCTTCCTGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: LTVPIIDSLTAKPESSSLRCVAP*LIFLEP Trigger: AGGCTCCAGGAAGATCAGGCATGGTGCCACACACCT...CAAGCTGCTGCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGGGACAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTTCCTGTCCCTACAGCTACACCTGTCACTTGCTGCCATGTCTCCCTATCAGTTACAATCATAGCTaGCCAGTGTGGGTGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVSCPYSYTCHLLPCLPISYNHS*PVWVLG Trigger: TCCCAGCACCCACACTGGGCAGCTATGATTGTAACT...GATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCTGTAGGGACAGGAAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTTCCTGTCCCTACAGCTACACCTGTCACTTGCTGCCATGTCTCCCTATCTGTGTGTGTGTGTTGTaGGGGTGCCATGTTACCAGT | + |
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Preference number: 2 (lower is better) Translates to: SVSCPYSYTCHLLPCLPICVCVL*GCHVTS Trigger: ACTGGTAACATGGCACCCCCACAACACACACACACA...GATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCTGTAGGGACAGGAAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCTACGAGCTGCCTTGCCATGGTGTTTTATCACAGCAGCAGAAACGTGTCTACATAGCTGCCCAGTGTaGGTGCTGGGATCTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: LLRAALPWCFITAAETCLHSCPV*VLGSEL Trigger: GAGTTCAGATCCCAGCACCCACACTGGGCAGCTATG...TAGACACGTTTCTGCTGCTGTGATAAAACACCATGGCAAGGCAGCTCGTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAAGTCCCCTACATGCTAAGCTAGTGGTGTTTCTAAAGCACACCTCTAACATGTGGGAGGTAGCCTaGGGCCAGAGGAAGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IKSPLHAKLVVFLKHTSNMWEVA*GQRKAL Trigger: CAGGGCCTTCCTCTGGCCCCAGGCTACCTCCCACAT...GTTAGAGGTGTGCTTTAGAAACACCACTAGCTTAGCATGTAGGGGACTTTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGAAACTGTAAGCCTAATAAAGTCTTCTACGAGCTGCCTTGCCATGGTGGTGGGTGCTGGGATCTaGACTCAGGACCTCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: FSETVSLIKSSTSCLAMVVGAGI*TQDLSM Trigger: CATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCAC...CACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR CAA 90 bp | CGGTCTCTGCTCTCTGACATGGAGTTGATGATGCTTTTTAAATACTaGATGAACTCCACCCGGACCTCCTCAGGGTCTTCCTCCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RSLLSDMELMMLFKY*MNSTRTSSGSSSRF Trigger: AAACCTGGAGGAAGACCCTGAGGAGGTCCGGGTGGAGTTCATCAAGTATTTAAAAAGCATCATCAACTCCATGTCAGAGAGCAGAGACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
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| 3UTR CAA 90 bp | GTGATGATGAGCATCTCCTCGCGGTCTCTGCTCTCTGACATGGAGTaGATGATGCTTTTTAAATACTTGATGAACTCCACCCGGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: VMMSISSRSLLSDME*MMLFKYLMNSTRTS Trigger: GGAGGTCCGGGTGGAGTTCATCAAGTATTTAAAAAGCATCATCAACTCCATGTCAGAGAGCAGAGACCGCGAGGAGATGCTCATCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
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| 3UTR-3UTR TCA 90 bp | GTAAGCCTAATAAAGTCTTCTACGAGCTGCCTTGCCATGGTGTTTTATCACAGCGTGAACAGCTCAGCCTaGAAACACAGTGCTAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: VSLIKSSTSCLAMVFYHSVNSSA*KHSARG Trigger: GCCCCTAGCACTGTGTTTTCAGGCTGAGCTGTTCAC...GCTGTGATAAAACACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCAGGAGCTGGACTACTACTTCTCTaGAACTGTAAGCCTAATAAA | + |
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Preference number: 2 (lower is better) Translates to: VNMLSVCVWGIGGQFAGAGLLLL*NCKPNK Trigger: TTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCC...AGCTCCTGCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR GCA 90 bp | AAACTGGTCACTGAGCTGTCTCACCAGACCACATCTTTATTTCTGAGAAAAGGTCACAGTGCTAGGGGCTaGCGGAAGGAAGGACATGTT | + |
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Preference number: 2 (lower is better) Translates to: KLVTELSHQTTSLFLRKGHSARG*RKEGHV Trigger: AACATGTCCTTCCTTCCGGCAGCCCCTAGCACTGTG...ACCTTTTCTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGACCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTATCTTGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTCAGCCTCCTGAGAGCTaGGATCACAGGTGTGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LPILMDYYFSETVSLIKSQPPES*DHRCVA Trigger: TGCCACACACCTGTGATCCCAGCTCTCAGGAGGCTG...AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTGCTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTGCAAGTCCCGATTCTCCTaGTTTCATGTCCTGGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ALLVTVNDSPTSYKTTNCKSRFS*FHVLAA Trigger: AGCTGCCAGGACATGAAAGCAGGAGAATCGGGACTT...GCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTATCTTGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTTGGGGTTGTCAGGCTTaGCAGCAAGTGAGCCATCTC | + |
|
Preference number: 2 (lower is better) Translates to: LPILMDYYFSETVSLIKSWGCQA*QQVSHL Trigger: GAGATGGCTCACTTGCTGCCAAGCCTGACAACCCCA...AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 90 bp | TGTCCCTACAGCTACACCTGTCACTTGCTGCCATGTCTCCCTATCTaGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CPYSYTCHLLPCLPI*MDYYFSETVSLIKS Trigger: AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCTGTAGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCAAAAGTCCCCTACATGCTAAGCTAGTGGTGTTTCTAAAGCACACCTCTAACGGACATGTTTATGCATaGCAACTGAGACAGGCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: IKSPLHAKLVVFLKHTSNGHVYA*QLRQAS Trigger: GCTTGCCTGTCTCAGTTGTCATGCATAAACATGTCC...GTTAGAGGTGTGCTTTAGAAACACCACTAGCTTAGCATGTAGGGGACTTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTATCTTGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTTTCCCTCACTGCCCTTaGGGACAGCAGAGATCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LPILMDYYFSETVSLIKSFPHCP*GQQRSH Trigger: ATGTGATCTCTGCTGTCCCCAAGGGCAGTGAGGGAA...AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | CTGCCTCTGCCTCCCCGGTGCCAGGATCTTAGGACATaGCACAGTGCCCAGATCTTTCACACGGGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LPLPPRCQDLRT*HSAQIFHTGLG Trigger: CCCCAAACCCGTGTGAAAGATCTGGGCACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | CTGGCTGGCCAGCAAGCCAAAGGATCTACCTGCCTCTaGCTCCCCGGTGCCAGGATCTTAGGACATGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LAGQQAKGSTCL*LPGARILGHAT Trigger: TGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCCTTTGGCTTGCTGGCCAGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | GCAAGCCAAAGGATCTACCTGCCTCTGCCTCCCCGGTaGCAGGATCTTAGGACATGCCACAGTGCCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: ASQRIYLPLPPR*QDLRTCHSAQI Trigger: GATCTGGGCACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCCTTTGGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | AAGCACACCTCTAACCCGAGTGGGGTTCTAAGCACATaGTCTACTGTGGAGCAGCACAACTCGCCCCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KHTSNPSGVLST*STVEQHNSPRP Trigger: GGGGCGGGGCGAGTTGTGCTGCTCCACAGTAGACCATGTGCTTAGAACCCCACTCGGGTTAGAGGTGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | AGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCAAGCAGGGCAGCTTTTaGCTTCTGGAGAAGGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SAPMQPGLALNSQPSSHLKQGSF*LLEKGG Trigger: TCCTCCCTTCTCCAGAAGCAAAAAGCTGCCCTGCTT...GAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGTCCTCTTGCTTGCAAGCCAAGGGTTCTACCAAAGGAGCCATCTCCTAGCATGGCCCTCAGAGCCTaGGGCTCCCGGCTGATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SGPLACKPRVLPKEPSPSMALRA*GSRLMA Trigger: TGCCATCAGCCGGGAGCCCAAGGCTCTGAGGGCCAT...GCTAGGAGATGGCTCCTTTGGTAGAACCCTTGGCTTGCAAGCAAGAGGACCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | CCGCGCACACTTGTGAACATGCTGAGTGTGTGCGTGTaGGGGATCGGAGGACAGTTTGCAGGAGCTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRTLVNMLSVCV*GIGGQFAGASS Trigger: AGAGCTAGCTCCTGCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCACAAGTGTGCGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGCACCATGCCTGATCTTCCTGGAGCCTTCTAGAGGAGAAGGGTGCGTCGGTCTTCCTCCAGGTTaGAGTGCACCAGCTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CVAPCLIFLEPSRGEGCVGLPPG*SAPASA Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAGGAAGACC...GACGCACCCTTCTCCTCTAGAAGGCTCCAGGAAGATCAGGCATGGTGCCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTACCTGCCTCTGCCTCCCCGGTGCCAGGATCTTAGGACATGCCACAGTGGAGGTGTGGTTTTGCTaGAGGAGTTATGTCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GSTCLCLPGARILGHATVEVWFC*RSYVSS Trigger: GCTGCTGACATAACTCCTCAAGCAAAACCACACCTC...CACTGTGGCATGTCCTAAGATCCTGGCACCGGGGAGGCAGAGGCAGGTAGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GTGTGGGTGCTGGGATCTGAACTCAGGACCTCAGCATaGGCAACAAGCACTCTGGACCGCAGATCCGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VWVLGSELRTSA*ATSTLDRRSVS Trigger: AGAGACGGATCTGCGGTCCAGAGTGCTTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GGATCGGAGGACAGTTTGCAGGAGCTAGCTCTTTCCTaGGCTGAGGGTGTGCGTGTGGGGGATTGGAGGATA | + |
|
Preference number: 3 (lower is better) Translates to: GSEDSLQELALS*AEGVRVGDWRI Trigger: TATCCTCCAATCCCCCACACGCACACCCTCAGCTCAGGAAAGAGCTAGCTCCTGCAAACTGTCCTCCGATCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | GCCCGAAAGCAGCAGCTTGATCACGTGTTCCCTCACTaGCCTTGGGGACAGCAGAGATCACATCACCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ARKQQLDHVFPH*PWGQQRSHHLS Trigger: AGACAGGTGATGTGATCTCTGCTGTCCCCAAGGGCAGTGAGGGAACACGTGATCAAGCTGCTGCTTTCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | TGCCTCAGTGTGTGTATGTGTGTGCACGTGCGTGTGTaGACACGTGCCTTCAGGAGCCCACTTCACGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: CLSVCMCVHVRV*TRAFRSPLHVT Trigger: AGTAACGTGAAGTGGGCTCCTGAAGGCACGTGTGCACACACGCACGTGCACACACATACACACACTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GCTAGGGGCTGCCGGAAGGAAGGACATGTTTATGCATaGCAACTGAGACAGGCAAGCAGGGCAGCTTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ARGCRKEGHVYA*QLRQASRAAFC Trigger: GCAAAAAGCTGCCCTGCTTGCCTGTCTCAGTTGTCATGCATAAACATGTCCTTCCTTCCGGCAGCCCCTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GTCTGCCTTAGGCCACTTCATCCCACTAAGCACCAGTaGACAGCTCAGCCTGAAAACACAGTGCTAGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VCLRPLHPTKHQ*TAQPENTVLGA Trigger: AGCCCCTAGCACTGTGTTTTCAGGCTGAGCTGTTCACTGGTGCTTAGTGGGATGAAGTGGCCTAAGGCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | CTTCTCTCAGGGATACAGGCAGCCGCCATACCTGCCTaGCATTTTGCGGGTTCTGAGACTCTGAATCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: LLSGIQAAAIPA*HFAGSETLNPD Trigger: GTCTGGATTCAGAGTCTCAGAACCCGCAAAATGTCAGGCAGGTATGGCGGCTGCCTGTATCCCTGAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | AGGCTGTCAGGCTTGCCAGCACACACCATCCCCTGCTaGGCCATCTTACCAGCCTTGCTTGTTACTGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGLPAHTIPC*AILPALLVTVN Trigger: ATTAACAGTAACAAGCAAGGCTGGTAAGATGGCTCAGCAGGGGATGGTGTGTGCTGGCAAGCCTGACAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | TCTGTAGGGTCAGATCTCTCTCCTTCCACCTTTAAGTaGGGTTGTCAGGCTTGGCAGCAAGTGAGCCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: SVGSDLSPSTFK*GCQAWQQVSHL Trigger: GAGATGGCTCACTTGCTGCCAAGCCTGACAACCCCACTTAAAGGTGGAAGGAGAGAGATCTGACCCTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCACCATGCCTGATCTTCCTGGAGCCTTCTAGAGGAGAAGGGTGCGTCAGCATGCTTTTTAAATACTaGATGAACTCCACCCGGACC | + |
|
Preference number: 3 (lower is better) Translates to: VAPCLIFLEPSRGEGCVSMLFKY*MNSTRT Trigger: GGTCCGGGTGGAGTTCATCAAGTATTTAAAAAGCAT...GCTGACGCACCCTTCTCCTCTAGAAGGCTCCAGGAAGATCAGGCATGGTGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACTGGTCACTGAGCTGTCTCACCAGACCACATCTTTATTTCTGAGAAAAGGTCAGCCAGGGCTGGCCTaGAACTCTCAACCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KLVTELSHQTTSLFLRKGQPGLA*NSQPSS Trigger: GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTG...ACCTTTTCTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGACCAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GCTGCCGGAAGGAAGGACATGTTTATGCATGACAACTaGGACAGGCAAGCAGGGCAGCTTTTTGCTTCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: AAGRKDMFMHDN*DRQAGQLFASG Trigger: TCCAGAAGCAAAAAGCTGCCCTGCTTGCCTGTCTCAGTTGTCATGCATAAACATGTCCTTCCTTCCGGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | CCATACCTGCCTGACATTTTGCGGGTTCTGAGACTCTaGATCCAGACCTCATGCTGTGTAGCCAGGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: PYLPDILRVLRL*IQTSCCVARKL Trigger: CAGTTTCCTGGCTACACAGCATGAGGTCTGGATTCAGAGTCTCAGAACCCGCAAAATGTCAGGCAGGTATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | GGAACTAGAGTTACAATCATAGCTGCCCAGTGTGGGTaGTGGGATCTGAACTCAGGACCTCAGCATGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTRVTIIAAQCG*WDLNSGPQHEQ Trigger: TTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACACTGGGCAGCTATGATTGTAACTCTAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | TGTGTGTATGTGTGTGCACGTGCGTGTGTGCACACGTaGCTTCAGGAGCCCACTTCACGTTACTTATTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CVYVCARACVHT*LQEPTSRYLLG Trigger: ACCTAATAAGTAACGTGAAGTGGGCTCCTGAAGGCACGTGTGCACACACGCACGTGCACACACATACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | CTCTCTCCTTCCACCTTTAAGTGGGGTTGTCAGGCTTaGCAGCAAGTGAGCCATCTCACTGTCCCCATTATT | + |
|
Preference number: 3 (lower is better) Translates to: LSPSTFKWGCQA*QQVSHLTVPII Trigger: AATAATGGGGACAGTGAGATGGCTCACTTGCTGCCAAGCCTGACAACCCCACTTAAAGGTGGAAGGAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | TTGTGTGTGTGTGTTGTGGGGGTGCCATGTTACCAGTaGAGACAGGACAACTCTGTAGGGTCAGATCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCVCVVGVPCYQ*RQDNSVGSDLS Trigger: AGAGAGATCTGACCCTACAGAGTTGTCCTGTCTCCACTGGTAACATGGCACCCCCACAACACACACACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCTCTCTGACATGGAGTaGATGATGCTTTTTAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: EISAPMQPGLALNSQPSSLSDME*MMLFKY Trigger: GTATTTAAAAAGCATCATCAACTCCATGTCAGAGAG...GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCTGAAACTGTAAGCCTAATAAAGTCTTCTACGAGCTGCCTTGCCATGGTGGTTCCCTCACTGCCCTaGGGGACAGCAGAGATCACA | + |
|
Preference number: 3 (lower is better) Translates to: FSETVSLIKSSTSCLAMVVPSLP*GTAEIT Trigger: TGTGATCTCTGCTGTCCCCAAGGGCAGTGAGGGAAC...CACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | CCAGACCTCATGCTGTGTAGCCAGGAAACTGGTCACTaGGCTGTCTCACCAGACCACATCTTTATTTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: PDLMLCSQETGH*AVSPDHIFISE Trigger: CTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGACCAGTTTCCTGGCTACACAGCATGAGGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | ACTAGAGTTACAATCATAGCTGCCCAGTGTGGGTGCTaGGATCTGAACTCAGGACCTCAGCATGAGCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: TRVTIIAAQCGC*DLNSGPQHEQQ Trigger: TTGTTGCTCATGCTGAGGTCCTGAGTTCAGATCCCAGCACCCACACTGGGCAGCTATGATTGTAACTCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | CTACCAAAGGAGCCATCTCCTAGCCCTTTGCATTCCTTTATAAAGATACTTTGTCCCGAAAGCAGCAGCTaGATCACGTGTTCCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LPKEPSPSPLHSFIKILCPESSS*ITCSLT Trigger: AGTGAGGGAACACGTGATCAAGCTGCTGCTTTCGGG...ACAAAGTATCTTTATAAAGGAATGCAAAGGGCTAGGAGATGGCTCCTTTGGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | CATCTGCTCTCTCTGCTTTGTGTTTGTAGTTCGGTATaGGACTCAGTTTCCTGTCCCTACAGCTACACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLLSLLCVCSSV*DSVSCPYSYTC Trigger: ACAGGTGTAGCTGTAGGGACAGGAAACTGAGTCTCATACCGAACTACAAACACAAAGCAGAGAGAGCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | CACACACCATCCCCTGCTGAGCCATCTTACCAGCCTTaGTTGTTACTGTTAATGACAGTCCAACAAGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: HTPSPAEPSYQP*LLLLMTVQQVT Trigger: TGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGCTGGTAAGATGGCTCAGCAGGGGATGGTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CCA 72 bp | GGTGTGGTTTTGCTTGAGGAGTTATGTCAGCAGCAGTaGGCTTTCAGTGTTCAAAGACTGATGGCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: GVVLLEELCQQQ*AFSVQRLMAFH Trigger: ATGGAATGCCATCAGTCTTTGAACACTGAAAGCCCACTGCTGCTGACATAACTCCTCAAGCAAAACCACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | TATGTCAGCAGCAGTGGGCTTTCAGTGTTCAAAGACTaGTGGCATTCCATCTGCTCTCTCTGCTTTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: YVSSSGLSVFKD*WHSICSLCFVF Trigger: AAACACAAAGCAGAGAGAGCAGATGGAATGCCATCAGTCTTTGAACACTGAAAGCCCACTGCTGCTGACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | GTTAATGACAGTCCAACAAGTTACAAGACCACTAACTaGAGGGAATGCAGAGCCCAGTCTTGGGAACTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: VNDSPTSYKTTN*RECRAQSWELC Trigger: ACAAAGTTCCCAAGACTGGGCTCTGCATTCCCTGCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | TCACTGAGCTGTCTCACCAGACCACATCTTTATTTCTaGGAAAAGGTCTTCCATAAGCTAGTGGCTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLSCLTRPHLYF*EKVFHKLVAHR Trigger: TCTGTGAGCCACTAGCTTATGGAAGACCTTTTCTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | AACTGTAAGCCTAATAAAGTCTTCTACGAGCTGCCTTaGCATGGTGTTTTATCACAGCAGCAGAAACGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NCKPNKVFYELP*HGVLSQQQKRV Trigger: GACACGTTTCTGCTGCTGTGATAAAACACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAAAGTCCCCTACATGCTAAGCTAGTGGTGTTTCTAAAGCACACCTCTAACCCCATTATTGATTCTTaGACAGCAAAGCCCGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: IKSPLHAKLVVFLKHTSNPIIDS*TAKPES Trigger: GCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGG...GTTAGAGGTGTGCTTTAGAAACACCACTAGCTTAGCATGTAGGGGACTTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR TCA 72 bp | GCCATGTCTCCCTATCTTGATGGACTACTACTTCTCTaGAACTGTAAGCCTAATAAAGTCTTCTACGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: AMSPYLDGLLLL*NCKPNKVFYEL Trigger: CAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAGACATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR GCA 72 bp | TCTGAAACTGTAAGCCTAATAAAGTCTTCTACGAGCTaGCTTGCCATGGTGTTTTATCACAGCAGCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SETVSLIKSSTS*LAMVFYHSSRN Trigger: GTTTCTGCTGCTGTGATAAAACACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | AGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCCCGGAGCCCGGTTTGTaGTGGGCCACAAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPMQPGLALNSQPSSHLPEPGL*WATSMQ Trigger: CTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGG...GAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR GCA 90 bp | GCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCAGCGAGACAAAGCCAGGCTaGCCCTTTCTCCTCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: APMQPGLALNSQPSSHLSETKPG*PFLLRS Trigger: GCTCCGGAGGAGAAAGGGGCAGCCTGGCTTTGTCTC...GCTGAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | GAGGAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTaGAACTCTCAACCCTCCTCCCACCTCAGCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEISAPMQPGLA*NSQPSSHLSLL Trigger: CAGGAGGCTGAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCAGCGCGGTCTCTGCTCTCTaGCATGGAGTTGATGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: APMQPGLALNSQPSSHLSAVSAL*HGVDDA Trigger: AGCATCATCAACTCCATGTCAGAGAGCAGAGACCGC...GCTGAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | AGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCTGTCCGAAGATTCAGTaGGAAAGTTGGCCAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPMQPGLALNSQPSSHLCPKIQ*ESWPTL Trigger: CAGTGTTGGCCAACTTTCTCACTGAATCTTCGGACA...GAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCGCCACAAGCATGCAGTaGCTGTCTTGGAGGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EISAPMQPGLALNSQPSSATSMQ*LSWRNC Trigger: ACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGC...GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCAGCCTTTGTTGTTGCTGGTaGCATGTGGGTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: APMQPGLALNSQPSSHLSLCCCW*HVGSQT Trigger: AGTTTGAGAACCCACATGTCACCAGCAACAACAAAG...GCTGAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GAGGAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTGTCCGAAGATTCAGTaGGAAAGTTGGCCAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: EEISAPMQPGLALNSQPSCPKIQ*ESWPTL Trigger: CAGTGTTGGCCAACTTTCTCACTGAATCTTCGGACA...GGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GGTGGGGTTAGTCAGCGTCCTTTGGGAGGCGGTGGCACTGGGACACTAGGTGATCTTTGTTGTTGCTGGTaGCATGTGGGTTCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GGVSQRPLGGGGTGTLGDLCCCW*HVGSQT Trigger: AGTTTGAGAACCCACATGTCACCAGCAACAACAAAG...ATCACCTAGTGTCCCAGTGCCACCGCCTCCCAAAGGACGCTGACTAACCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS-3UTR GCA 90 bp | GTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCAGGAGCTTCCTCCAGGTTTGAGTaGACCAGCTTCAGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VNMLSVCVWGIGGQFAGASSRFE*TSFSLF Trigger: GAACAAGCTGAAGCTGGTGCACTCAAACCTGGAGGA...AGCTCCTGCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | GCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCAGCCCTCACACCTTGTGTTaGGTTATATTCAGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: APMQPGLALNSQPSSHLSPHTLC*VIFSDV Trigger: GACATCACTGAATATAACCCAACACAAGGTGTGAGG...GCTGAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | TGTCAGGCTTGGCAGCAAGTGAGCCATCTCACTGTCCCCATTATTGATTCTTTGCCGGAGCCCGGTTTGTaGTGGGCCACAAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CQAWQQVSHLTVPIIDSLPEPGL*WATSMQ Trigger: CTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGG...CAAAGAATCAATAATGGGGACAGTGAGATGGCTCACTTGCTGCCAAGCCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR GCA 90 bp | CTCACTGTCCCCATTATTGATTCTTTGACAGCAAAGCCCGAAAGCAGCAGCTTGGAGACAAAGCCAGGCTaGCCCTTTCTCCTCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTVPIIDSLTAKPESSSLETKPG*PFLLRS Trigger: GCTCCGGAGGAGAAAGGGGCAGCCTGGCTTTGTCTC...CAAGCTGCTGCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGGGACAGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | GACTCAGTTTCCTGTCCCTACAGCTACACCTGTCACTaGCTGCCATGTCTCCCTATCTTGATGGACTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: DSVSCPYSYTCH*LPCLPILMDYY Trigger: GTAGTAGTCCATCAAGATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCTGTAGGGACAGGAAACTGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | CAAGTGAGCCATCTCACTGTCCCCATTATTGATTCTTaGACAGCAAAGCCCGAAAGCAGCAGCTTGATCACG | + |
|
Preference number: 4 (lower is better) Translates to: QVSHLTVPIIDS*TAKPESSSLIT Trigger: CGTGATCAAGCTGCTGCTTTCGGGCTTTGCTGTCAAAGAATCAATAATGGGGACAGTGAGATGGCTCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | ATGTGTGTGTACATGAGTGTGAAGCCCAGAGGAGCCTaGGTAGTTGCTCATTCAGGCACCACAACTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MCVYMSVKPRGA*VVAHSGTTTIS Trigger: AGAAATAGTTGTGGTGCCTGAATGAGCAACTACCAAGGCTCCTCTGGGCTTCACACTCATGTACACACACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | AGCTACACCTGTCACTTGCTGCCATGTCTCCCTATCTaGATGGACTACTACTTCTCTGAAACTGTAAGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SYTCHLLPCLPI*MDYYFSETVSL Trigger: TAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | ACACCATCCCCTGCTGAGCCATCTTACCAGCCTTGCTaGTTACTGTTAATGACAGTCCAACAAGTTACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPSPAEPSYQPC*LLLMTVQQVTR Trigger: TCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGCTGGTAAGATGGCTCAGCAGGGGATGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | CTCCCTATCTTGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTACGATCACCACTCCATaGGCATCCTTCATCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPILMDYYFSETVSLIKSTITTP*ASFIRA Trigger: CGCTCTGATGAAGGATGCTCATGGAGTGGTGATCGT...AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTGCTGGAGGAACTGTTGCTaGACAAAGCAGGAATACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLVTVNDSPTSYKTTNCWRNCC*TKQEYH Trigger: GTGGTATTCCTGCTTTGTCCAGCAACAGTTCCTCCA...GCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR TCA 90 bp | GCCTTGCTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTGCTTGGAATATCAGCATTaGAGACGATCACCACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLVTVNDSPTSYKTTNCLEYQH*RRSPLH Trigger: ATGGAGTGGTGATCGTCTTCAATGCTGATATTCCAA...GCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTGCCCTCACACCTTGTGTTaGGTTATATTCAGTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLVTVNDSPTSYKTTNCPHTLC*VIFSDV Trigger: GACATCACTGAATATAACCCAACACAAGGTGTGAGG...GCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| 3UTR CAA 72 bp | CCAAGGGTTCTACCAAAGGAGCCATCTCCTAGCCCTTaGCATTCCTTTATAAAGATACTTTGTACTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRVLPKEPSPSP*HSFIKILCTDF Trigger: AAAGTCAGTACAAAGTATCTTTATAAAGGAATGCAAAGGGCTAGGAGATGGCTCCTTTGGTAGAACCCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTGCTTGTTACTGTTAATGACAGTCCAACAAGTTACAAGACCACTAACTGCTCAATTTCCTTTAAGTaGCTTGGAATATCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLVTVNDSPTSYKTTNCSISFK*LGISAL Trigger: CAATGCTGATATTCCAAGCCACTTAAAGGAAATTGA...GCAGTTAGTGGTCTTGTAACTTGTTGGACTGTCATTAACAGTAACAAGCAAGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | AGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCTCTCGCAGCCCGTGCCTTaGTTGTTGCTGGTGACATGT | + |
|
Preference number: 5 (lower is better) Translates to: SAPMQPGLALNSQPSSHLSQPVP*LLLVTC Trigger: ACATGTCACCAGCAACAACAAAGGCACGGGCTGCGA...GAGGTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS GCA 90 bp | TGCCCCTTTCTCCTCCGGAGCCCGGTTTGTGGTGGGCCACAAGCATaGAGTGACTGTCTTGGAGGAACTGTTGTTAGAGTCGCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: CPFLLRSPVCGGPQA*SDCLGGTVVRVATT Trigger: TGTGGTGGCGACTCTAACAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGGAGGAGAAAGGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS-3UTR CAA 90 bp | GAGATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCCCGTGCCTTTGTTGTaGCTGGTGACATGTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: EISAPMQPGLALNSQPSSPVPLL*LVTCGF Trigger: GAACCCACATGTCACCAGCAACAACAAAGGCACGGG...GGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTATCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000008131.10 ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | TTGATGAACTCCACCCGGACCTCCTCAGGGTCTTCCTCCAGGTTTGAGTGCACCCAGCCCGTGCCTTTGTaGTTGCTGGTGACATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LMNSTRTSSGSSSRFECTQPVPL*LLVTCG Trigger: CCCACATGTCACCAGCAACAACAAAGGCACGGGCTG...GGTGCACTCAAACCTGGAGGAAGACCCTGAGGAGGTCCGGGTGGAGTTCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS GCA 90 bp | TGCCCCTTTCTCCTCCGGAGCCCGGTTTGTGGTGGGCCACAAGCATaGAGTGACTGTCTTGGAGGAACTGTTGCTGGACAAAGCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: CPFLLRSPVCGGPQA*SDCLGGTVAGQSRN Trigger: ATTCCTGCTTTGTCCAGCAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGGAGGAGAAAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | CACACTTGTGAACATGCTGAGTGTGTGCGTGTGGGGGATCGGAGGACAGTTTGCGGTCTTCCTCCAGGTTaGAGTGCACCAGCTTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTCEHAECVRVGDRRTVCGLPPG*SAPASA Trigger: AGCTGAAGCTGGTGCACTCAAACCTGGAGGAAGACC...GCAAACTGTCCTCCGATCCCCCACACGCACACACTCAGCATGTTCACAAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | ATAAGCGCTCCTATGCAGCCAGGGCTGGCCTTGAACTCTCAACCCTCCTCCCACCATGCAGTGACTGTCTaGGAGGAACTGTTGTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISAPMQPGLALNSQPSSHHAVTV*EELLLE Trigger: CTCTAACAACAGTTCCTCCAAGACAGTCACTGCATG...GTGGGAGGAGGGTTGAGAGTTCAAGGCCAGCCCTGGCTGCATAGGAGCGCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS TCA 90 bp | AGTCCCAGAGCTCGAATTCGCAGCCCGTGCCTTTGTTGTTGCTGGTaGCATGTGGGTTCTCAAACTCTAGGATCCTCACACCTTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPRARIRSPCLCCCW*HVGSQTLGSSHLVL Trigger: CAACACAAGGTGTGAGGATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | TCAGTTTCCTGTCCCTACAGCTACACCTGTCACTTGCTGCCATGTCTCCCTATCCATGCAGTGACTGTCTaGGAGGAACTGTTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSCPYSYTCHLLPCLPIHAVTV*EELLLD Trigger: GTCCAGCAACAGTTCCTCCAAGACAGTCACTGCATG...GATAGGGAGACATGGCAGCAAGTGACAGGTGTAGCTGTAGGGACAGGAAACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | GCTAAGCTAGTGGTGTTTCTAAAGCACACCTCTAACCCGAGTGGGGTTCTAAGCGTCTTGGAGGAACTGTaGCTGGACAAAGCAGGAATA | + |
|
Preference number: 5 (lower is better) Translates to: AKLVVFLKHTSNPSGVLSVLEEL*LDKAGI Trigger: TATTCCTGCTTTGTCCAGCAACAGTTCCTCCAAGAC...GCTTAGAACCCCACTCGGGTTAGAGGTGTGCTTTAGAAACACCACTAGCTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS TCA 90 bp | TTTAAGTGGCTTGGAATATCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGAGCGGGCCAACAGGACTCAAACCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FKWLGISALKTITTP*ASFIRAGQQDSNLT Trigger: TGTGAGGTTTGAGTCCTGTTGGCCCGCTCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGATATTCCAAGCCACTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199101.5 |
||
| CDS-3UTR CAA 90 bp | AAACTGGTCACTGAGCTGTCTCACCAGACCACATCTTTATTTCTGAGAAAAGGTCCCGTGCCTTTGTTGTaGCTGGTGACATGTGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLVTELSHQTTSLFLRKGPVPLL*LVTCGF Trigger: GAACCCACATGTCACCAGCAACAACAAAGGCACGGG...ACCTTTTCTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGACCAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | CTACCAAAGGAGCCATCTCCTAGCCCTTTGCATTCCTTTATAAAGATACTTTGTCAGCCCGTGCCTTTGTaGTTGCTGGTGACATGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPKEPSPSPLHSFIKILCQPVPL*LLVTCG Trigger: CCCACATGTCACCAGCAACAACAAAGGCACGGGCTG...ACAAAGTATCTTTATAAAGGAATGCAAAGGGCTAGGAGATGGCTCCTTTGGTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS TCA 90 bp | TTTAAGTGGCTTGGAATATCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGAGCGGGCCAACAGGACTCAAACTTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FKWLGISALKTITTP*ASFIRAGQQDSNLE Trigger: CTCTAAGTTTGAGTCCTGTTGGCCCGCTCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGATATTCCAAGCCACTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGAAACTGTAAGCCTAATAAAGTCTTCTACGAGCTGCCTTGCCATGGTGCTTGGAATATCAGCATaGAAGACGATCACCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSETVSLIKSSTSCLAMVLGISA*KTITTP Trigger: TGGAGTGGTGATCGTCTTCAATGCTGATATTCCAAG...CACCATGGCAAGGCAGCTCGTAGAAGACTTTATTAGGCTTACAGTTTCAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | AAACTGGTCACTGAGCTGTCTCACCAGACCACATCTTTATTTCTGAGAAAAGGTATGCTTTTTAAATACTaGATGAACTCCACCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KLVTELSHQTTSLFLRKGMLFKY*MNSTRT Trigger: GGTCCGGGTGGAGTTCATCAAGTATTTAAAAAGCAT...ACCTTTTCTCAGAAATAAAGATGTGGTCTGGTGAGACAGCTCAGTGACCAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS-3UTR CAA 90 bp | CTCCCTATCTTGATGGACTACTACTTCTCTGAAACTGTAAGCCTAATAAAGTCTCTCTCTGACATGGAGTaGATGATGCTTTTTAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: LPILMDYYFSETVSLIKSLSDME*MMLFKY Trigger: GTATTTAAAAAGCATCATCAACTCCATGTCAGAGAG...AGACTTTATTAGGCTTACAGTTTCAGAGAAGTAGTAGTCCATCAAGATAGGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200157.5 |
||
| CDS GCA 72 bp | CTCCTCCGGAGCCCGGTTTGTGGTGGGCCACAAGCATaGAGTGACTGTCTTGGAGGAACTGTTGCTGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: LLRSPVCGGPQA*SDCLGGTVAGQ Trigger: TTGTCCAGCAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS GCA 72 bp | CTCCTCCGGAGCCCGGTTTGTGGTGGGCCACAAGCATaGAGTGACTGTCTTGGAGGAACTGTTGTTAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLRSPVCGGPQA*SDCLGGTVVRV Trigger: GACTCTAACAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAACCGGGCTCCGGAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS CAA 90 bp | GAGTCGCCACCACAGTCCCAGAGCTCGAATTCGCAGCCCGTGCCTTaGTTGTTGCTGGTGACATGTGGGTTCTCAAACTCTAGGATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ESPPQSQSSNSQPVP*LLLVTCGFSNSRIL Trigger: GAGGATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGACTGTGGTGGCGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS CAA 90 bp | TTTGTGGTGGGCCACAAGCATGCAGTGACTGTCTTGGAGGAACTGTaGTTAGAGTCGCCACCACAGTCCCAGAGCTCGAATTCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FVVGHKHAVTVLEEL*LESPPQSQSSNSQP Trigger: GGGCTGCGAATTCGAGCTCTGGGACTGTGGTGGCGACTCTAACAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS CAA 72 bp | CGGTTTGTGGTGGGCCACAAGCATGCAGTGACTGTCTaGGAGGAACTGTTGTTAGAGTCGCCACCACAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RFVVGHKHAVTV*EELLLESPPQS Trigger: GGACTGTGGTGGCGACTCTAACAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCCCACCACAAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
||
| CDS CAA 90 bp | CCACCACAGTCCCAGAGCTCGAATTCGCAGCCCGTGCCTTTGTTGTaGCTGGTGACATGTGGGTTCTCAAACTCTAGGATCCTCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: PPQSQSSNSQPVPLL*LVTCGFSNSRILTP Trigger: AGGTGTGAGGATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGACTGTGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS CAA 90 bp | TCGCCACCACAGTCCCAGAGCTCGAATTCGCAGCCCGTGCCTTTGTaGTTGCTGGTGACATGTGGGTTCTCAAACTCTAGGATCCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SPPQSQSSNSQPVPL*LLVTCGFSNSRILT Trigger: TGTGAGGATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGACTGTGGTGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
||
| CDS CAA 72 bp | CCACAGTCCCAGAGCTCGAATTCGCAGCCCGTGCCTTaGTTGTTGCTGGTGACATGTGGGTTCTCAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: PQSQSSNSQPVP*LLLVTCGFSNS Trigger: AGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGACTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS CAA 72 bp | GGCCACAAGCATGCAGTGACTGTCTTGGAGGAACTGTaGTTAGAGTCGCCACCACAGTCCCAGAGCTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: GHKHAVTVLEEL*LESPPQSQSSN Trigger: ATTCGAGCTCTGGGACTGTGGTGGCGACTCTAACAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008131.10 |
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| CDS TCA 72 bp | GCTCGAATTCGCAGCCCGTGCCTTTGTTGTTGCTGGTaGCATGTGGGTTCTCAAACTCTAGGATCCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: ARIRSPCLCCCW*HVGSQTLGSSH Trigger: GTGTGAGGATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS CAA 72 bp | TCCCAGAGCTCGAATTCGCAGCCCGTGCCTTTGTTGTaGCTGGTGACATGTGGGTTCTCAAACTCTAGGATC | + |
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Preference number: 6 (lower is better) Translates to: SQSSNSQPVPLL*LVTCGFSNSRI Trigger: GATCCTAGAGTTTGAGAACCCACATGTCACCAGCAACAACAAAGGCACGGGCTGCGAATTCGAGCTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000008131.10 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS CAA 90 bp | TGTGTTGGGTTATATTCAGTGATGTCCGAAGATTCAGTGAGAAAGTaGGCCAACACTGTTTTGCCGCTCTCGCAGGGGCCCACGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CVGLYSVMSEDSVRK*ANTVLPLSQGPTKR Trigger: CCTCTTCGTGGGCCCCTGCGAGAGCGGCAAAACAGTGTTGGCCAACTTTCTCACTGAATCTTCGGACATCACTGAATATAACCCAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008131.10 ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS TCA 72 bp | CTTGGAATATCAGCATTGAAGACGATCACCACTCCATaGGCATCCTTCATCAGAGCGGGCCAACAGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: LGISALKTITTP*ASFIRAGQQDS Trigger: TGAGTCCTGTTGGCCCGCTCTGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGATATTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS CAA 72 bp | TTATATTCAGTGATGTCCGAAGATTCAGTGAGAAAGTaGGCCAACACTGTTTTGCCGCTCTCGCAGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: LYSVMSEDSVRK*ANTVLPLSQGP Trigger: GGGCCCCTGCGAGAGCGGCAAAACAGTGTTGGCCAACTTTCTCACTGAATCTTCGGACATCACTGAATATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000008131.10 ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS CCA 72 bp | AGCGGGCCAACAGGACTCAAACCTCACACCTTGTGTTaGGTTATATTCAGTGATGTCCGAAGATTCAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: SGPTGLKPHTLC*VIFSDVRRFSE Trigger: CTCACTGAATCTTCGGACATCACTGAATATAACCCAACACAAGGTGTGAGGTTTGAGTCCTGTTGGCCCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199101.5 |
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| CDS CAA 72 bp | GGCCACAAGCATGCAGTGACTGTCTTGGAGGAACTGTaGCTGGACAAAGCAGGAATACCACATTTCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: GHKHAVTVLEEL*LDKAGIPHFNF Trigger: GAAATTGAAATGTGGTATTCCTGCTTTGTCCAGCAACAGTTCCTCCAAGACAGTCACTGCATGCTTGTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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| CDS TCA 72 bp | TTTCAATTTCCTTTAAGTGGCTTGGAATATCAGCATTaGAGACGATCACCACTCCATGAGCATCCTTCATCA | + |
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Preference number: 6 (lower is better) Translates to: FQFPLSGLEYQH*RRSPLHEHPSS Trigger: TGATGAAGGATGCTCATGGAGTGGTGATCGTCTTCAATGCTGATATTCCAAGCCACTTAAAGGAAATTGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000199101.5 ENSMUST00000200153.5 ENSMUST00000200157.5 |
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