Pregenerated sensors for IFT172 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038564Ensembl transcript IDs: ENSMUST00000041565.11, ENSMUST00000201809.2, ENSMUST00000202585.5, ENSMUST00000202589.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATCCCGGGGCAGAACCTGCTCCAGTCTCTGGTCCATCGAGACTGTaGGCACCCAGTCTCGGACCTCTTCTCTCTGGGCCTCCGGGACGT | + |
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Preference number: 5 (lower is better) Translates to: HPGAEPAPVSGPSRL*APSLGPLLSGPPGR Trigger: ACGTCCCGGAGGCCCAGAGAGAAGAGGTCCGAGACTGGGTGCTCACAGTCTCGATGGACCAGAGACTGGAGCAGGTTCTGCCCCGGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | AGTACCTCAGCAACGCTGTCAGGATCGTGGGCCTCAGCCACGCGCTaGGCTGCCTCCCAGTCCTGGTTGTGGACAAACATGAGGACCGCC | + |
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Preference number: 5 (lower is better) Translates to: STSATLSGSWASATR*AASQSWLWTNMRTA Trigger: GGCGGTCCTCATGTTTGTCCACAACCAGGACTGGGAGGCAGCTCAGCGCGTGGCTGAGGCCCACGATCCTGACAGCGTTGCTGAGGTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | CCGATCAGCTGGGGCCCTACAACCCGGACGACTTCCAGACTGCGCTaGGGAGGCAGGAACTTGATGGACAGTTCAGCCGCCTTCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: PISWGPTTRTTSRLR*GGRNLMDSSAAFIQ Trigger: CTGGATGAAGGCGGCTGAACTGTCCATCAAGTTCCTGCCTCCCCAGCGCAGTCTGGAAGTCGTCCGGGTTGTAGGGCCCCAGCTGATCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | CCTTTCCATAGGCCACAATCCTCCGGTCACAGCCAGCGGCCACAATaGTGTTGGTGGCCCAGGCCAAGGCATAGGGTGGGCATGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: PFHRPQSSGHSQRPQ*CWWPRPRHRVGMDG Trigger: ACCATCCATGCCCACCCTATGCCTTGGCCTGGGCCACCAACAGCATTGTGGCCGCTGGCTGTGACCGGAGGATTGTGGCCTATGGAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | CTGGGCCTCAAGGTAGTGATACTCAGCCTCCTGCAGTCGGCCTTCTaGCTCCAGCTCCTTGCCCAGGTGAAGGTGTGTGTCGCTGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGLKVVILSLLQSAF*LQLLAQVKVCVAEE Trigger: CTCCTCAGCGACACACACCTTCACCTGGGCAAGGAGCTGGAGGCAGAAGGCCGACTGCAGGAGGCTGAGTATCACTACCTTGAGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | CTCAGCAACGCTGTCAGGATCGTGGGCCTCAGCCACGCGCTGAGCTaGCTCCCAGTCCTGGTTGTGGACAAACATGAGGACCGCCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSNAVRIVGLSHALS*LPVLVVDKHEDRLF Trigger: AAAGAGGCGGTCCTCATGTTTGTCCACAACCAGGACTGGGAGGCAGCTCAGCGCGTGGCTGAGGCCCACGATCCTGACAGCGTTGCTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | CTCCATGGGCTTTGGCCACCCGGTAGGCCTCCTCCCAAAGCCCGCTaGAGCGGTACATGTTCACAGTTGCCTTCCATTCCTGGGCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: LHGLWPPGRPPPKAR*SGTCSQLPSIPGPQ Trigger: TTGAGGCCCAGGAATGGAAGGCAACTGTGAACATGTACCGCTCCAGCGGGCTTTGGGAGGAGGCCTACCGGGTGGCCAAAGCCCATGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | CTCCCAGGCTTTTGGCCCACAGATAGGCCACGTGTTTGTGGGCATTaGCTCCTCCATGGGCTTTGGCCACCCGGTAGGCCTCCTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LPGFWPTDRPRVCGH*LLHGLWPPGRPPPK Trigger: TTTGGGAGGAGGCCTACCGGGTGGCCAAAGCCCATGGAGGAGCCAATGCCCACAAACACGTGGCCTATCTGTGGGCCAAAAGCCTGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | GCAGTCCACTGCACGGCTATACTCTCCAGCCTGTTCCCACTGCCGTaGTTGCTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: AVHCTAILSSLFPLP*LLYKSLHPSASLLG Trigger: ACCAAGAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCAGTGGGAACAGGCTGGAGAGTATAGCCGTGCAGTGGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | GCTTGTGGGCTTGCTCCCAGCGGCCGGCCTGGGTGTACATGTCTATaGCGTCTTTGGTCCGGTCTCCTTTGGTGTAGAGCTCCTCAGCAA | + |
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Preference number: 5 (lower is better) Translates to: ACGLAPSGRPGCTCL*RLWSGLLWCRAPQQ Trigger: TTGCTGAGGAGCTCTACACCAAAGGAGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCTGGGAGCAAGCCCACAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | TCCACTGCACGGCTATACTCTCCAGCCTGTTCCCACTGCCGTGCTTaGTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTCTTGGTAGCT | + |
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Preference number: 5 (lower is better) Translates to: STARLYSPACSHCRA*STSPSTPLPPFLVA Trigger: AGCTACCAAGAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCAGTGGGAACAGGCTGGAGAGTATAGCCGTGCAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | ATGCATTTCATGGCCAGCTTGTGGGCTTGCTCCCAGCGGCCGGCCTaGGTGTACATGTCTATGGCGTCTTTGGTCCGGTCTCCTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: MHFMASLWACSQRPA*VYMSMASLVRSPLV Trigger: CACCAAAGGAGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCTGGGAGCAAGCCCACAAGCTGGCCATGAAATGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | GAGCCTTCATCATCGAAGAAGTACCTGACGATGGTGCCGTCTGCGTaGCCCGAGAGGATCCCCTTCCCAGAGCAGTTGGTTGTCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: EPSSSKKYLTMVPSA*PERIPFPEQLVVSA Trigger: AGCACTGACAACCAACTGCTCTGGGAAGGGGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGATGAAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | ACTTTCCCTGTGACTCTCCAGAGCCTTCATCATCGAAGAAGTACCTaGCGATGGTGCCGTCTGCGTGACCCGAGAGGATCCCCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: TFPVTLQSLHHRRST*RWCRLRDPRGSPSQ Trigger: CTGGGAAGGGGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGATGAAGGCTCTGGAGAGTCACAGGGAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | TTCCCAGCACAACAGACTGGCCTCCAGGACTTGCAGCAGCTGTGGTaGACTCCCGCTCCTGAGGGTCTCGGCTATAGTCAAAAGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: FPAQQTGLQDLQQLW*TPAPEGLGYSQKSA Trigger: TGCAGACTTTTGACTATAGCCGAGACCCTCAGGAGCGGGAGTTCACCACAGCTGCTGCAAGTCCTGGAGGCCAGTCTGTTGTGCTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | CAGCCTCTCGGTACTTGCCCTGCTTCTCCATCTCCTGGGCTTGTGTaGTGTAAAGCACGGACACGTCCTCGGGTCGCATGCATTTCATGG | + |
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Preference number: 5 (lower is better) Translates to: QPLGTCPASPSPGLV*CKARTRPRVACISW Trigger: CCATGAAATGCATGCGACCCGAGGACGTGTCCGTGCTTTACATCACACAAGCCCAGGAGATGGAGAAGCAGGGCAAGTACCGAGAGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | TCCAGAGCCTTCATCATCGAAGAAGTACCTGACGATGGTGCCGTCTaGGTGACCCGAGAGGATCCCCTTCCCAGAGCAGTTGGTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: SRAFIIEEVPDDGAV*VTREDPLPRAVGCQ Trigger: CTGACAACCAACTGCTCTGGGAAGGGGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGATGAAGGCTCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | GGGTGTCCCTTGGCCTCAGCCACAGCAATGCATTCCTCCCAGCGGTaGAACTCTTGGTACATGTCCATGGCCTCCTCAACAGCATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: GCPLASATAMHSSQR*NSWYMSMASSTAFC Trigger: ACAGAATGCTGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGCTGAGGCCAAGGGACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS CCA 90 bp | CTTGCTCCCAGCGGCCGGCCTGGGTGTACATGTCTATGGCGTCTTTaGTCCGGTCTCCTTTGGTGTAGAGCTCCTCAGCAATCTCATACT | + |
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Preference number: 5 (lower is better) Translates to: LAPSGRPGCTCLWRL*SGLLWCRAPQQSHT Trigger: AGTATGAGATTGCTGAGGAGCTCTACACCAAAGGAGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCTGGGAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | CTCCAGCTCCTTGCCCAGGTGAAGGTGTGTGTCGCTGAGGAGGTCTaGATGGTGCTTCCCCACCAGGCGAATCATGTCGTCATACAACTT | + |
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Preference number: 5 (lower is better) Translates to: LQLLAQVKVCVAEEV*MVLPHQANHVVIQL Trigger: AAGTTGTATGACGACATGATTCGCCTGGTGGGGAAGCACCATCCAGACCTCCTCAGCGACACACACCTTCACCTGGGCAAGGAGCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | AAGTCTGTCATAACTTCCCAGCACAACAGACTGGCCTCCAGGACTTaGAGCAGCTGTGGTGAACTCCCGCTCCTGAGGGTCTCGGCTATA | + |
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Preference number: 5 (lower is better) Translates to: KSVITSQHNRLASRT*SSCGELPLLRVSAI Trigger: TATAGCCGAGACCCTCAGGAGCGGGAGTTCACCACAGCTGCTGCAAGTCCTGGAGGCCAGTCTGTTGTGCTGGGAAGTTATGACAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | TCCATTCCTCGCTGGCAGCGCTCATTGATACGGACGCTGATGAGGTaGGGGTTCATGAATTCGGTGCGCACAGAACCCAAGGAGTCGTTA | + |
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Preference number: 5 (lower is better) Translates to: SIPRWQRSLIRTLMR*GFMNSVRTEPKESL Trigger: TAACGACTCCTTGGGTTCTGTGCGCACCGAATTCATGAACCCTCACCTCATCAGCGTCCGTATCAATGAGCGCTGCCAGCGAGGAATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202589.2 |
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| CDS TCA 90 bp | CCACCTCCACTGGGAAGGCCAGTCGAGCCAGCTCAACAGCTTTCATaGATGCATTGCCTTTACAGTAACACTCAAGGGCCCGCTGTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PPPLGRPVEPAQQLS*MHCLYSNTQGPAVD Trigger: ATCCACAGCGGGCCCTTGAGTGTTACTGTAAAGGCAATGCATTCATGAAAGCTGTTGAGCTGGCTCGACTGGCCTTCCCAGTGGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | AAGCTGCCTTGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACATTaGCTCTGTTTCGGGAGTCATCTCCAGGGTCTCCAAGAAGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: KLPCLQGQFAQGFPH*LCFGSHLQGLQEGC Trigger: ACAGCCTTCTTGGAGACCCTGGAGATGACTCCCGAAACAGAGGCAATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAAGGCAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
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| CDS GCA 90 bp | ATTCTGTGGGTTTGCAGGGGCTCCGTGTTGCACATAGAGGGCCAGTaGCTGGGCATAGCCACCTTCTCGGATCAGATGAGTTGCATACAA | + |
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Preference number: 5 (lower is better) Translates to: ILWVCRGSVLHIEGQ*LGIATFSDQMSCIQ Trigger: TTGTATGCAACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCACTGGCCCTCTATGTGCAACACGGAGCCCCTGCAAACCCACAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | GGATGGTGCTTCCCCACCAGGCGAATCATGTCGTCATACAACTTGTaGTTTTTGAACATGGTGATGGCGAGATCAGGCTCCTCCACCGTC | + |
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Preference number: 5 (lower is better) Translates to: GWCFPTRRIMSSYNL*FLNMVMARSGSSTV Trigger: GACGGTGGAGGAGCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGTGGGGAAGCACCATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | CATACTCTTCCTGTAGGGCCTCTAGCTGGCCAGGCACATAGTCCTTaGAGATTCTCAGAGCGTCGCTCCAGAGTCCAGCCTCCTTATAAT | + |
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Preference number: 5 (lower is better) Translates to: HTLPVGPLAGQAHSP*RFSERRSRVQPPYN Trigger: ATTATAAGGAGGCTGGACTCTGGAGCGACGCTCTGAGAATCTGCAAGGACTATGTGCCTGGCCAGCTAGAGGCCCTACAGGAAGAGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | TTGGCCTCAGCCACAGCAATGCATTCCTCCCAGCGGTGCAACTCTTaGTACATGTCCATGGCCTCCTCAACAGCATTCTGTTCCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: LASATAMHSSQRCNS*YMSMASSTAFCSKK Trigger: CTTCTTGGAACAGAATGCTGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGCTGAGGCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS TCA 90 bp | CTACTACGTCCACACCCACCAGCGAATCCACTTTGCCCTGGTTCTTaGGGAACTCCTTATAGTGCTGATCCACATAGTCCTCATACCGGG | + |
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Preference number: 5 (lower is better) Translates to: LLRPHPPANPLCPGS*GTPYSADPHSPHTG Trigger: CCCGGTATGAGGACTATGTGGATCAGCACTATAAGGAGTTCCTCAAGAACCAGGGCAAAGTGGATTCGCTGGTGGGTGTGGACGTAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | CTCAAGGGCCCGCTGTGGATTTCGAATCTTCTCAAAGAGATCACCTaGCCTTTCATAGAGCTCTCCCTTGATGAGGGCTGTGGTGATATG | + |
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Preference number: 5 (lower is better) Translates to: LKGPLWISNLLKEIT*PFIELSLDEGCGDM Trigger: CATATCACCACAGCCCTCATCAAGGGAGAGCTCTATGAAAGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGGGCCCTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | GCGCTTGGCCTTGTTCCACTCTTCCCCCTCAATGAAAGCATCGATTaGTTCTTTGACAAGGTCCAGGTTCAGATAGAGTTCTGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALGLVPLFPLNESID*FFDKVQVQIEFCSS Trigger: GCTGCTGCAGAACTCTATCTGAACCTGGACCTTGTCAAAGAAGCAATCGATGCTTTCATTGAGGGGGAAGAGTGGAACAAGGCCAAGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | AGAAAGCCTGGCAGCTACGGTTTCCAGCTGTTTGATACTCTGGGCTaGAGATCGCGTAGCGTAGTAATGAGAGATCAGCAGCATCATCTC | + |
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Preference number: 5 (lower is better) Translates to: RKPGSYGFQLFDTLG*RSRSVVMRDQQHHL Trigger: GAGATGATGCTGCTGATCTCTCATTACTACGCTACGCGATCTGCAGCCCAGAGTATCAAACAGCTGGAAACCGTAGCTGCCAGGCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | ACATTCTCATTTTCAAAGAAATATTTCTCATTGCCCCCAGATCCCTaGCAGGCTATCTCGCTGAGGCGGTTCGTGTTCAGGTCTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: TFSFSKKYFSLPPDP*QAISLRRFVFRSPS Trigger: GCTGGGAGACCTGAACACGAACCGCCTCAGCGAGATAGCCTGGCAGGGATCTGGGGGCAATGAGAAATATTTCTTTGAAAATGAGAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202589.2 |
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| CDS GCA 90 bp | ATAGAAGTCCGTTCCTTCTCCACCATATTCCCTGGACACCTGATCTaGAATCTCATTGGTCTCATGCAGGAACCGAGCTTTGGCCACATG | + |
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Preference number: 5 (lower is better) Translates to: IEVRSFSTIFPGHLI*NLIGLMQEPSFGHM Trigger: CATGTGGCCAAAGCTCGGTTCCTGCATGAGACCAATGAGATTGCAGATCAGGTGTCCAGGGAATATGGTGGAGAAGGAACGGACTTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS GCA 90 bp | GAGGGCCAGTGCCTGGGCATAGCCACCTTCTCGGATCAGATGAGTTaGATACAAAGCCACATACTTGTGCAGAATCTTGTAGTTCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: EGQCLGIATFSDQMS*IQSHILVQNLVVLL Trigger: AAGCAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCACTGGCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | AGAGATCAGCAGCATCATCTCAAACTCCTCATGCGCTGCAGAGTTTaGCTCACTGGACTTCACCAGGTTTTCACACAGGTTGAAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RDQQHHLKLLMRCRV*LTGLHQVFTQVEED Trigger: GTCCTCTTCAACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTGCAGCGCATGAGGAGTTTGAGATGATGCTGCTGATCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | GTTCCAAGAAGATCATCTCAGCAAGTTTGTAGTTCTTCTCCAGCATaGCGAGACGAGCTCGGACCTGATAGAAGTCCGTTCCTTCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: VPRRSSQQVCSSSPA*RDELGPDRSPFLLH Trigger: GTGGAGAAGGAACGGACTTCTATCAGGTCCGAGCTCGTCTCGCCATGCTGGAGAAGAACTACAAACTTGCTGAGATGATCTTCTTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS CCA 90 bp | CATGCCTTTCACCATGTAGCTTTTCCTGCCGTACTTCATGTCAGCTaGTTTGGTGGAGAACTTGTCTCTCCGCTCCCCATGTTCATCATA | + |
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Preference number: 5 (lower is better) Translates to: HAFHHVAFPAVLHVS*FGGELVSPLPMFII Trigger: TATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAGGAAAAGCTACATGGTGAAAGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | TTCCCAGGATTTTCACCTCTTCTACTTCATAGCCATAGTGTGACTTaGGCACCACCCTGGTCCCTGAAGACAGGTTCTTCACAATCACCT | + |
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Preference number: 5 (lower is better) Translates to: FPGFSPLLLHSHSVT*APPWSLKTGSSQSP Trigger: AGGTGATTGTGAAGAACCTGTCTTCAGGGACCAGGGTGGTGCTCAAGTCACACTATGGCTATGAAGTAGAAGAGGTGAAAATCCTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 90 bp | GTAGTAATGAGAGATCAGCAGCATCATCTCAAACTCCTCATGCGCTaGAGAGTTTGCCTCACTGGACTTCACCAGGTTTTCACACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: VVMRDQQHHLKLLMR*RVCLTGLHQVFTQV Trigger: AACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTGCAGCGCATGAGGAGTTTGAGATGATGCTGCTGATCTCTCATTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | TCACCATGTAGCTTTTCCTGCCGTACTTCATGTCAGCTGGTTTGGTaGAGAACTTGTCTCTCCGCTCCCCATGTTCATCATACAGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: SPCSFSCRTSCQLVW*RTCLSAPHVHHTEV Trigger: TACTTCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAGGAAAAGCTACATGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | CTTTCACCATGTAGCTTTTCCTGCCGTACTTCATGTCAGCTGGTTTaGTGGAGAACTTGTCTCTCCGCTCCCCATGTTCATCATACAGAA | + |
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Preference number: 5 (lower is better) Translates to: LSPCSFSCRTSCQLV*WRTCLSAPHVHHTE Trigger: TTCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAGGAAAAGCTACATGGTGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 90 bp | TCTTCAAATTTGCCCTCATCTTCCAGGTACATGGCGTATTTGAGATaGATCTCTGGGGCTTTGTGCTTGAAGGCTAGCCGAGAGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSNLPSSSRYMAYLR*ISGALCLKASRESS Trigger: TGAACTCTCTCGGCTAGCCTTCAAGCACAAAGCCCCAGAGATTCATCTCAAATACGCCATGTACCTGGAAGATGAGGGCAAATTTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 90 bp | TTTCATGAATGCATTGCCTTTACAGTAACACTCAAGGGCCCGCTGTaGATTTCGAATCTTCTCAAAGAGATCACCTGCCCTTTCATAGAG | + |
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Preference number: 5 (lower is better) Translates to: FHECIAFTVTLKGPL*ISNLLKEITCPFIE Trigger: CTCTATGAAAGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGGGCCCTTGAGTGTTACTGTAAAGGCAATGCATTCATGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | AGGCCACAATCCTCCGGTCACAGCCAGCGGCCACAATaGTGTTGGTGGCCCAGGCCAAGGCATAGGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RPQSSGHSQRPQ*CWWPRPRHRVG Trigger: GCCCACCCTATGCCTTGGCCTGGGCCACCAACAGCATTGTGGCCGCTGGCTGTGACCGGAGGATTGTGGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | TCCTCCGGTCACAGCCAGCGGCCACAATGCTGTTGGTaGCCCAGGCCAAGGCATAGGGTGGGCATGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: SSGHSQRPQCCW*PRPRHRVGMDG Trigger: ACCATCCATGCCCACCCTATGCCTTGGCCTGGGCCACCAACAGCATTGTGGCCGCTGGCTGTGACCGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | AAAGCACGGACACGTCCTCGGGTCGCATGCATTTCATaGCCAGCTTGTGGGCTTGCTCCCAGCGGCCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: KARTRPRVACIS*PACGLAPSGRP Trigger: AGGCCGGCCGCTGGGAGCAAGCCCACAAGCTGGCCATGAAATGCATGCGACCCGAGGACGTGTCCGTGCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | TGGGGCCCTACAACCCGGACGACTTCCAGACTGCGCTaGGGAGGCAGGAACTTGATGGACAGTTCAGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: WGPTTRTTSRLR*GGRNLMDSSAA Trigger: GGCGGCTGAACTGTCCATCAAGTTCCTGCCTCCCCAGCGCAGTCTGGAAGTCGTCCGGGTTGTAGGGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | CCTCGCTCATCCCGGGGCAGAACCTGCTCCAGTCTCTaGTCCATCGAGACTGTGAGCACCCAGTCTCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: PRSSRGRTCSSL*SIETVSTQSRT Trigger: GGTCCGAGACTGGGTGCTCACAGTCTCGATGGACCAGAGACTGGAGCAGGTTCTGCCCCGGGATGAGCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | GCAACGCTGTCAGGATCGTGGGCCTCAGCCACGCGCTaGGCTGCCTCCCAGTCCTGGTTGTGGACAAACATG | + |
|
Preference number: 6 (lower is better) Translates to: ATLSGSWASATR*AASQSWLWTNM Trigger: CATGTTTGTCCACAACCAGGACTGGGAGGCAGCTCAGCGCGTGGCTGAGGCCCACGATCCTGACAGCGTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | GCTGTCAGGATCGTGGGCCTCAGCCACGCGCTGAGCTaGCTCCCAGTCCTGGTTGTGGACAAACATGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVRIVGLSHALS*LPVLVVDKHED Trigger: GTCCTCATGTTTGTCCACAACCAGGACTGGGAGGCAGCTCAGCGCGTGGCTGAGGCCCACGATCCTGACAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | CAATCCTCCGGTCACAGCCAGCGGCCACAATGCTGTTaGTGGCCCAGGCCAAGGCATAGGGTGGGCATGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QSSGHSQRPQCC*WPRPRHRVGMD Trigger: ATCCATGCCCACCCTATGCCTTGGCCTGGGCCACCAACAGCATTGTGGCCGCTGGCTGTGACCGGAGGATTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | ATGGCCAGCTTGTGGGCTTGCTCCCAGCGGCCGGCCTaGGTGTACATGTCTATGGCGTCTTTGGTCCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MASLWACSQRPA*VYMSMASLVRS Trigger: AGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCTGGGAGCAAGCCCACAAGCTGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | CGGCTATACTCTCCAGCCTGTTCCCACTGCCGTGCTTaGTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLYSPACSHCRA*STSPSTPLPPF Trigger: GAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCAGTGGGAACAGGCTGGAGAGTATAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | TGCACGGCTATACTCTCCAGCCTGTTCCCACTGCCGTaGTTGCTCTACAAGTCCCTCCACCCCTCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTAILSSLFPLP*LLYKSLHPSAS Trigger: GGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCAGTGGGAACAGGCTGGAGAGTATAGCCGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | TCTGCAGCAGCACTGTGCTTTCCAATCCCGATCAGCTaGGGCCCTACAACCCGGACGACTTCCAGACTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SAAALCFPIPIS*GPTTRTTSRLR Trigger: GCGCAGTCTGGAAGTCGTCCGGGTTGTAGGGCCCCAGCTGATCGGGATTGGAAAGCACAGTGCTGCTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | CTCTTCTCTCTGGGCCTCCGGGACGTGCTGCTTGGCTaGGAGCGGCACCTCAAAGGGAATGTCAGTATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LFSLGLRDVLLG*ERHLKGNVSIL Trigger: CAGGATACTGACATTCCCTTTGAGGTGCCGCTCCCAGCCAAGCAGCACGTCCCGGAGGCCCAGAGAGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | GGACCTCTTCTCTCTGGGCCTCCGGGACGTGCTGCTTaGCTGGGAGCGGCACCTCAAAGGGAATGTCAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GPLLSGPPGRAA*LGAAPQRECQY Trigger: ATACTGACATTCCCTTTGAGGTGCCGCTCCCAGCCAAGCAGCACGTCCCGGAGGCCCAGAGAGAAGAGGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | GTCCACTGCACGGCTATACTCTCCAGCCTGTTCCCACTGCCGTGCTaGCTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTCTTGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VHCTAILSSLFPLPC*LYKSLHPSASLLGS Trigger: GCTACCAAGAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCAGTGGGAACAGGCTGGAGAGTATAGCCGTGCAGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | GCAGAACCTGCTCCAGTCTCTGGTCCATCGAGACTGTaGGCACCCAGTCTCGGACCTCTTCTCTCTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AEPAPVSGPSRL*APSLGPLLSGP Trigger: AGGCCCAGAGAGAAGAGGTCCGAGACTGGGTGCTCACAGTCTCGATGGACCAGAGACTGGAGCAGGTTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | CCTGTAGGGCCTCTAGCTGGCCAGGCACATAGTCCTTaGAGATTCTCAGAGCGTCGCTCCAGAGTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PVGPLAGQAHSP*RFSERRSRVQP Trigger: AGGCTGGACTCTGGAGCGACGCTCTGAGAATCTGCAAGGACTATGTGCCTGGCCAGCTAGAGGCCCTACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | CTTGCTCCCAGCGGCCGGCCTGGGTGTACATGTCTATaGCGTCTTTGGTCCGGTCTCCTTTGGTGTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LAPSGRPGCTCL*RLWSGLLWCRA Trigger: AGCTCTACACCAAAGGAGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCTGGGAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | CTTGCCCAGGTGAAGGTGTGTGTCGCTGAGGAGGTCTaGATGGTGCTTCCCCACCAGGCGAATCATGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LAQVKVCVAEEV*MVLPHQANHVV Trigger: GACGACATGATTCGCCTGGTGGGGAAGCACCATCCAGACCTCCTCAGCGACACACACCTTCACCTGGGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | GAGCCCAGCTTTGAGGTAGAGGCTGATAGCTGCCAGCCCATCCCCTaGGCTCTCCTGCAGTTCACCTGCTCGTTCCTCTTGCTGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EPSFEVEADSCQPIP*ALLQFTCSFLLLCV Trigger: GACACACAGCAAGAGGAACGAGCAGGTGAACTGCAGGAGAGCCAAGGGGATGGGCTGGCAGCTATCAGCCTCTACCTCAAAGCTGGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | CCTACAACCCGGACGACTTCCAGACTGCGCTGGGGAGGCAGGAACTaGATGGACAGTTCAGCCGCCTTCATCCAGCACTTCTCCATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTRTTSRLRWGGRN*MDSSAAFIQHFSIR Trigger: CCTGATGGAGAAGTGCTGGATGAAGGCGGCTGAACTGTCCATCAAGTTCCTGCCTCCCCAGCGCAGTCTGGAAGTCGTCCGGGTTGTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | TGCCGTGCTTGCTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTCTaGGTAGCTTCTCGCTCATACTCTTCCTGTAGGGCCTCTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CRACSTSPSTPLPPF*VASRSYSSCRASSW Trigger: CCAGCTAGAGGCCCTACAGGAAGAGTATGAGCGAGAAGCTACCAAGAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCAAGCACGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | CAACAGACTGGCCTCCAGGACTTGCAGCAGCTGTGGTaGACTCCCGCTCCTGAGGGTCTCGGCTATAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QQTGLQDLQQLW*TPAPEGLGYSQ Trigger: TTGACTATAGCCGAGACCCTCAGGAGCGGGAGTTCACCACAGCTGCTGCAAGTCCTGGAGGCCAGTCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | GGTACTTGCCCTGCTTCTCCATCTCCTGGGCTTGTGTaGTGTAAAGCACGGACACGTCCTCGGGTCGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: GTCPASPSPGLV*CKARTRPRVAC Trigger: GCATGCGACCCGAGGACGTGTCCGTGCTTTACATCACACAAGCCCAGGAGATGGAGAAGCAGGGCAAGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | ATAACTTCCCAGCACAACAGACTGGCCTCCAGGACTTaGAGCAGCTGTGGTGAACTCCCGCTCCTGAGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: ITSQHNRLASRT*SSCGELPLLRV Trigger: GACCCTCAGGAGCGGGAGTTCACCACAGCTGCTGCAAGTCCTGGAGGCCAGTCTGTTGTGCTGGGAAGTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | AAGGTAGTGATACTCAGCCTCCTGCAGTCGGCCTTCTaGCTCCAGCTCCTTGCCCAGGTGAAGGTGTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KVVILSLLQSAF*LQLLAQVKVCV Trigger: GACACACACCTTCACCTGGGCAAGGAGCTGGAGGCAGAAGGCCGACTGCAGGAGGCTGAGTATCACTACCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | GTTTGCAGGGGCTCCGTGTTGCACATAGAGGGCCAGTaGCTGGGCATAGCCACCTTCTCGGATCAGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VCRGSVLHIEGQ*LGIATFSDQMS Trigger: ACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCACTGGCCCTCTATGTGCAACACGGAGCCCCTGCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CCA 72 bp | AGCGGCCGGCCTGGGTGTACATGTCTATGGCGTCTTTaGTCCGGTCTCCTTTGGTGTAGAGCTCCTCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGRPGCTCLWRL*SGLLWCRAPQQ Trigger: TTGCTGAGGAGCTCTACACCAAAGGAGACCGGACCAAAGACGCCATAGACATGTACACCCAGGCCGGCCGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | CGCTTCCAGGCCAGGGCGGTGACGGTGTATAAGTTAGCGATCTCCTaGGGTTTCGCCTCTTCCCAGATGCTTCTTCGAGGACTCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RFQARAVTVYKLAIS*GFASSQMLLRGLQL Trigger: CAACTGGAGTCCTCGAAGAAGCATCTGGGAAGAGGCGAAACCCAAGGAGATCGCTAACTTATACACCGTCACCGCCCTGGCCTGGAAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 72 bp | TCATCGAAGAAGTACCTGACGATGGTGCCGTCTGCGTaGCCCGAGAGGATCCCCTTCCCAGAGCAGTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSKKYLTMVPSA*PERIPFPEQLV Trigger: AACCAACTGCTCTGGGAAGGGGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 72 bp | GTGACTCTCCAGAGCCTTCATCATCGAAGAAGTACCTaGCGATGGTGCCGTCTGCGTGACCCGAGAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: VTLQSLHHRRST*RWCRLRDPRGS Trigger: GGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGATGAAGGCTCTGGAGAGTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | CGCTGGCAGCGCTCATTGATACGGACGCTGATGAGGTaGGGGTTCATGAATTCGGTGCGCACAGAACCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RWQRSLIRTLMR*GFMNSVRTEPK Trigger: CTTGGGTTCTGTGCGCACCGAATTCATGAACCCTCACCTCATCAGCGTCCGTATCAATGAGCGCTGCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202589.2 |
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| CDS CCA 72 bp | GATCCACATAGTCCTCATACCGGGGATCTAGCTCTTTaGCCACGCGCTTGGCCTTGTTCCACTCTTCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPHSPHTGDLAL*PRAWPCSTLPP Trigger: AGGGGGAAGAGTGGAACAAGGCCAAGCGCGTGGCCAAAGAGCTAGATCCCCGGTATGAGGACTATGTGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | TGCTCTACAAGTCCCTCCACCCCTCTGCCTCCCTTCTaGGTAGCTTCTCGCTCATACTCTTCCTGTAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CSTSPSTPLPPF*VASRSYSSCRA Trigger: GGCCCTACAGGAAGAGTATGAGCGAGAAGCTACCAAGAAGGGAGGCAGAGGGGTGGAGGGACTTGTAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | GAAGCTGCCTTGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACATaGCCTCTGTTTCGGGAGTCATCTCCAGGGTCTCCAAGAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EAALPPGPVCSRFST*PLFRESSPGSPRRL Trigger: CAGCCTTCTTGGAGACCCTGGAGATGACTCCCGAAACAGAGGCAATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAAGGCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
||
| CDS TCA 72 bp | TCTCCATCAGGCCACTGCTTCCTGAGTCGCGAACTTTaGGGTAGCAGTCCACTGCACGGCTATACTCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSGHCFLSREL*GSSPLHGYTLQ Trigger: CTGGAGAGTATAGCCGTGCAGTGGACTGCTACCTCAAAGTTCGCGACTCAGGAAGCAGTGGCCTGATGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | TTCATCATCGAAGAAGTACCTGACGATGGTGCCGTCTaGGTGACCCGAGAGGATCCCCTTCCCAGAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: FIIEEVPDDGAV*VTREDPLPRAV Trigger: AACTGCTCTGGGAAGGGGATCCTCTCGGGTCACGCAGACGGCACCATCGTCAGGTACTTCTTCGATGATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS GCA 72 bp | TTGGCCTCAGCCACAGCAATGCATTCCTCCCAGCGGTaGAACTCTTGGTACATGTCCATGGCCTCCTCAACA | + |
|
Preference number: 6 (lower is better) Translates to: LASATAMHSSQR*NSWYMSMASST Trigger: TGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGCTGAGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CAA 72 bp | CGTGACCCGAGAGGATCCCCTTCCCAGAGCAGTTGGTaGTCAGTGCTACCACGTAAGACTCTGTCCCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDPRGSPSQSSW*SVLPRKTLSHR Trigger: TCTATGGGACAGAGTCTTACGTGGTAGCACTGACAACCAACTGCTCTGGGAAGGGGATCCTCTCGGGTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 72 bp | GCCAGGGCGGTGACGGTGTATAAGTTAGCGATCTCCTaGGGTTTCGCCTCTTCCCAGATGCTTCTTCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARAVTVYKLAIS*GFASSQMLLRG Trigger: TCCTCGAAGAAGCATCTGGGAAGAGGCGAAACCCAAGGAGATCGCTAACTTATACACCGTCACCGCCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 72 bp | TCCTCATACCGGGGATCTAGCTCTTTGGCCACGCGCTaGGCCTTGTTCCACTCTTCCCCCTCAATGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSYRGSSSLATR*ALFHSSPSMKA Trigger: TGCTTTCATTGAGGGGGAAGAGTGGAACAAGGCCAAGCGCGTGGCCAAAGAGCTAGATCCCCGGTATGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | GAGCGTCGCTCCAGAGTCCAGCCTCCTTATAATAATTaGGAGCCAGACCTGGTCTCTGGGCCCGAAGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: ERRSRVQPPYNN*EPDLVSGPEVV Trigger: TACTACTTCGGGCCCAGAGACCAGGTCTGGCTCTCAATTATTATAAGGAGGCTGGACTCTGGAGCGACGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS TCA 72 bp | CCTTCTGTCACCATGACACATAAGCTGTTTCGGTTCTaGGCTACCAGCACATCACTCCCCGGAACCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSVTMTHKLFRF*ATSTSLPGTHC Trigger: GCAGTGGGTTCCGGGGAGTGATGTGCTGGTAGCTCAGAACCGAAACAGCTTATGTGTCATGGTGACAGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202585.5 |
||
| CDS GCA 72 bp | TGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACATTaGCTCTGTTTCGGGAGTCATCTCCAGGGTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CLQGQFAQGFPH*LCFGSHLQGLQ Trigger: TTGGAGACCCTGGAGATGACTCCCGAAACAGAGGCAATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
||
| CDS GCA 72 bp | AGCAGAGAAGCACCTCTCAGCAGTGTGAAGCTGCCTTaGCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: SREAPLSSVKLP*LQGQFAQGFPH Trigger: ATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAAGGCAGCTTCACACTGCTGAGAGGTGCTTCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CCA 72 bp | CGGTCCACTGTGCAGACAGCAAATTTAGCATTGTTCTaGGACCAGGCCATGCATGTCACCTTCGCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSTVQTANLALF*DQAMHVTFAAP Trigger: TGGAGCTGCGAAGGTGACATGCATGGCCTGGTCCCAGAACAATGCTAAATTTGCTGTCTGCACAGTGGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000201809.2 |
||
| CDS CCA 72 bp | GCCACAGCAATGCATTCCTCCCAGCGGTGCAACTCTTaGTACATGTCCATGGCCTCCTCAACAGCATTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ATAMHSSQRCNS*YMSMASSTAFC Trigger: ACAGAATGCTGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CAA 72 bp | TTGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACATaGCCTCTGTTTCGGGAGTCATCTCCAGGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPPGPVCSRFST*PLFRESSPGSP Trigger: TGGAGACCCTGGAGATGACTCCCGAAACAGAGGCAATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
||
| CDS CAA 72 bp | AAGCAGAGAAGCACCTCTCAGCAGTGTGAAGCTGCCTaGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: KQRSTSQQCEAA*PPGPVCSRFST Trigger: TGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAAGGCAGCTTCACACTGCTGAGAGGTGCTTCTCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CAA 72 bp | AGCCACAGCAATGCATTCCTCCCAGCGGTGCAACTCTaGGTACATGTCCATGGCCTCCTCAACAGCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHSNAFLPAVQL*VHVHGLLNSIL Trigger: CAGAATGCTGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CAA 72 bp | TACCGGGGATCTAGCTCTTTGGCCACGCGCTTGGCCTaGTTCCACTCTTCCCCCTCAATGAAAGCATCGATT | + |
|
Preference number: 6 (lower is better) Translates to: YRGSSSLATRLA*FHSSPSMKASI Trigger: AATCGATGCTTTCATTGAGGGGGAAGAGTGGAACAAGGCCAAGCGCGTGGCCAAAGAGCTAGATCCCCGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
||
| CDS CAA 90 bp | CATGACCTAAAGCAGAGAAGCACCTCTCAGCAGTGTGAAGCTGCCTaGCCTCCAGGGCCAGTTTGCTCAAGGTTTTCCACATTGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HDLKQRSTSQQCEAA*PPGPVCSRFSTLPL Trigger: CAGAGGCAATGTGGAAAACCTTGAGCAAACTGGCCCTGGAGGCAAGGCAGCTTCACACTGCTGAGAGGTGCTTCTCTGCTTTAGGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
||
| CDS CAA 90 bp | CTTGGCCTCAGCCACAGCAATGCATTCCTCCCAGCGGTGCAACTCTaGGTACATGTCCATGGCCTCCTCAACAGCATTCTGTTCCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LGLSHSNAFLPAVQL*VHVHGLLNSILFQE Trigger: TTCTTGGAACAGAATGCTGTTGAGGAGGCCATGGACATGTACCAAGAGTTGCACCGCTGGGAGGAATGCATTGCTGTGGCTGAGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS CAA 90 bp | CCTTTTGTAGATGTTGAAATTCTGTGGGTTTGCAGGGGCTCCGTGTaGCACATAGAGGGCCAGTGCCTGGGCATAGCCACCTTCTCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PFVDVEILWVCRGSV*HIEGQCLGIATFSD Trigger: ATCCGAGAAGGTGGCTATGCCCAGGCACTGGCCCTCTATGTGCAACACGGAGCCCCTGCAAACCCACAGAATTTCAACATCTACAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | GCCAGTCCAAAGACAATGACGTATTCCGCAGGCCACTaGAGACAAGTCACAGCACTCGTCTGGATGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ASPKTMTYSAGH*RQVTALVWMNL Trigger: CAAGTTCATCCAGACGAGTGCTGTGACTTGTCTGCAGTGGCCTGCGGAATACGTCATTGTCTTTGGACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | GGCCCACATACGTCAGCTCGAACTTGTTCTTGTAAATaGTCCTTCGGAGGCAGCAGTCAAACTGTTCCACCC | + |
|
Preference number: 6 (lower is better) Translates to: GPHTSARTCSCK*SFGGSSQTVPP Trigger: GGGTGGAACAGTTTGACTGCTGCCTCCGAAGGAGCATTTACAAGAACAAGTTCGAGCTGACGTATGTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | GGCAGCTACGGTTTCCAGCTGTTTGATACTCTGGGCTaGAGATCGCGTAGCGTAGTAATGAGAGATCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSYGFQLFDTLG*RSRSVVMRDQQ Trigger: CTGCTGATCTCTCATTACTACGCTACGCGATCTGCAGCCCAGAGTATCAAACAGCTGGAAACCGTAGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | CACCATGTAGCTTTTCCTGCCGTACTTCATGTCAGCTaGTTTGGTGGAGAACTTGTCTCTCCGCTCCCCATG | + |
|
Preference number: 6 (lower is better) Translates to: HHVAFPAVLHVS*FGGELVSPLPM Trigger: CATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAGGAAAAGCTACATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | CCACTGGCTGATGAACTTGAGCACGTCCTGGCACACTaGGCTGTGAGAGGTCTTGATGGCCATAAGAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PLADELEHVLAH*AVRGLDGHKKL Trigger: AAGTTTCTTATGGCCATCAAGACCTCTCACAGCCCAGTGTGCCAGGACGTGCTCAAGTTCATCAGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | ACCACTCGGTCCACTGTGCAGACAGCAAATTTAGCATaGTTCTGGGACCAGGCCATGCATGTCACCTTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTRSTVQTANLA*FWDQAMHVTFA Trigger: TGCGAAGGTGACATGCATGGCCTGGTCCCAGAACAATGCTAAATTTGCTGTCTGCACAGTGGACCGAGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000201809.2 |
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| CDS CAA 72 bp | CAGTCCTGGTTGTGGACAAACATGAGGACCGCCTCTTaGGGTTTACCAGCTCGGATGAATTCAGCTTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSWLWTNMRTAS*GLPARMNSASA Trigger: GGCTGAAGCTGAATTCATCCGAGCTGGTAAACCCAAAGAGGCGGTCCTCATGTTTGTCCACAACCAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | TACAGAAGTACCACTCGGTCCACTGTGCAGACAGCAAATTTAGCATaGTTCTGGGACCAGGCCATGCATGTCACCTTCGCAGCTCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: YRSTTRSTVQTANLA*FWDQAMHVTFAAPS Trigger: GGATGGAGCTGCGAAGGTGACATGCATGGCCTGGTCCCAGAACAATGCTAAATTTGCTGTCTGCACAGTGGACCGAGTGGTACTTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000201809.2 |
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| CDS CAA 90 bp | TGCTTCCCCACCAGGCGAATCATGTCGTCATACAACTTGTGCTTTTaGAACATGGTGATGGCGAGATCAGGCTCCTCCACCGTCACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CFPTRRIMSSYNLCF*NMVMARSGSSTVTY Trigger: GTACGTGACGGTGGAGGAGCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGTGGGGAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | TCTGGATGGTGCTTCCCCACCAGGCGAATCATGTCGTCATACAACTaGTGCTTTTTGAACATGGTGATGGCGAGATCAGGCTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SGWCFPTRRIMSSYN*CFLNMVMARSGSST Trigger: GGTGGAGGAGCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGTGGGGAAGCACCATCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 72 bp | TCGCCTCTTCCCAGATGCTTCTTCGAGGACTCCAGTTaGACACCCGAAGTCTGTCATAACTTCCCAGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SPLPRCFFEDSS*TPEVCHNFPAQ Trigger: TTGTGCTGGGAAGTTATGACAGACTTCGGGTGTTCAACTGGAGTCCTCGAAGAAGCATCTGGGAAGAGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 72 bp | CCACACCCACCAGCGAATCCACTTTGCCCTGGTTCTTaGGGAACTCCTTATAGTGCTGATCCACATAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PHPPANPLCPGS*GTPYSADPHSP Trigger: AGGACTATGTGGATCAGCACTATAAGGAGTTCCTCAAGAACCAGGGCAAAGTGGATTCGCTGGTGGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | TTGGTAGCTGTTTCAATGCATTTATCCCACTGGCCCTaGTCCACATACAGGTCCAAGGCAGCTACTACGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVAVSMHLSHWP*STYRSKAATTS Trigger: GGACGTAGTAGCTGCCTTGGACCTGTATGTGGAGCAGGGCCAGTGGGATAAATGCATTGAAACAGCTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | ATGCAGTGTTGCGATCCTGGAGATCTAATATATAAATaGCCTTCTTCCACTGGCGGGCACCCAGGGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MQCCDPGDLIYK*PSSTGGHPGQP Trigger: AGGCTGCCCTGGGTGCCCGCCAGTGGAAGAAGGCAATTTATATATTAGATCTCCAGGATCGCAACACTGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | GCAGCATCATCTCAAACTCCTCATGCGCTGCAGAGTTaGCCTCACTGGACTTCACCAGGTTTTCACACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AASSQTPHALQS*PHWTSPGFHTG Trigger: ACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTGCAGCGCATGAGGAGTTTGAGATGATGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | AGAGGGCCAGTGCCTGGGCATAGCCACCTTCTCGGATCAGATGAGTaGCATACAAAGCCACATACTTGTGCAGAATCTTGTAGTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGPVPGHSHLLGSDE*HTKPHTCAESCSSA Trigger: AGCAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCACTGGCCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS TCA 72 bp | TTGCCCTCATCTTCCAGGTACATGGCGTATTTGAGATaGATCTCTGGGGCTTTGTGCTTGAAGGCTAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPSSSRYMAYLR*ISGALCLKASR Trigger: TCGGCTAGCCTTCAAGCACAAAGCCCCAGAGATTCATCTCAAATACGCCATGTACCTGGAAGATGAGGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | CGTTCCTTCTCCACCATATTCCCTGGACACCTGATCTaGAATCTCATTGGTCTCATGCAGGAACCGAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RSFSTIFPGHLI*NLIGLMQEPSF Trigger: AAAGCTCGGTTCCTGCATGAGACCAATGAGATTGCAGATCAGGTGTCCAGGGAATATGGTGGAGAAGGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS GCA 72 bp | CCGCTGTGGATTTCGAATCTTCTCAAAGAGATCACCTaGCCTTTCATAGAGCTCTCCCTTGATGAGGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLWISNLLKEIT*PFIELSLDEGC Trigger: ACAGCCCTCATCAAGGGAGAGCTCTATGAAAGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | TTCCCCACCAGGCGAATCATGTCGTCATACAACTTGTaGTTTTTGAACATGGTGATGGCGAGATCAGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FPTRRIMSSYNL*FLNMVMARSGS Trigger: GGAGCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGTGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS GCA 72 bp | CAGCATCATCTCAAACTCCTCATGCGCTGCAGAGTTTaGCTCACTGGACTTCACCAGGTTTTCACACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QHHLKLLMRCRV*LTGLHQVFTQV Trigger: AACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTGCAGCGCATGAGGAGTTTGAGATGATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | TGTAGCTTTTCCTGCCGTACTTCATGTCAGCTGGTTTaGTGGAGAACTTGTCTCTCCGCTCCCCATGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSFSCRTSCQLV*WRTCLSAPHVH Trigger: ATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAGGAAAAGCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | AGATCATCTCAGCAAGTTTGTAGTTCTTCTCCAGCATaGCGAGACGAGCTCGGACCTGATAGAAGTCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSQQVCSSSPA*RDELGPDRSPF Trigger: GAACGGACTTCTATCAGGTCCGAGCTCGTCTCGCCATGCTGGAGAAGAACTACAAACTTGCTGAGATGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 |
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| CDS CCA 72 bp | TTCTGCTTGGTAGCTGTTTCAATGCATTTATCCCACTaGCCCTGCTCCACATACAGGTCCAAGGCAGCTACT | + |
|
Preference number: 6 (lower is better) Translates to: FCLVAVSMHLSH*PCSTYRSKAAT Trigger: AGTAGCTGCCTTGGACCTGTATGTGGAGCAGGGCCAGTGGGATAAATGCATTGAAACAGCTACCAAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | CTGCCGTACTTCATGTCAGCTGGTTTGGTGGAGAACTaGTCTCTCCGCTCCCCATGTTCATCATACAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LPYFMSAGLVEN*SLRSPCSSYRS Trigger: ACTTCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGTACGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | ACCAGGCGAATCATGTCGTCATACAACTTGTGCTTTTaGAACATGGTGATGGCGAGATCAGGCTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: TRRIMSSYNLCF*NMVMARSGSST Trigger: GGTGGAGGAGCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | TGCTTCCCCACCAGGCGAATCATGTCGTCATACAACTaGTGCTTTTTGAACATGGTGATGGCGAGATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: CFPTRRIMSSYN*CFLNMVMARSG Trigger: GCCTGATCTCGCCATCACCATGTTCAAAAAGCACAAGTTGTATGACGACATGATTCGCCTGGTGGGGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | GTAGAGCTCCTCAGCAATCTCATACTCCTGCAGAGACGCATAGTGTaGAGCCACACGAGGATAGTATTTAGATGCAGTGTTGCGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VELLSNLILLQRRIV*SHTRIVFRCSVAIL Trigger: CAGGATCGCAACACTGCATCTAAATACTATCCTCGTGTGGCTCAACACTATGCGTCTCTGCAGGAGTATGAGATTGCTGAGGAGCTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 90 bp | TCACCATGTAGCTTTTCCTTCATGTCAGCTGGTTTGGTGGAGAACTaGTCTCTCCGCTCCCCATGTTCATCATACAGAAGTACCACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SPCSFSFMSAGLVEN*SLRSPCSSYRSTTR Trigger: CCGAGTGGTACTTCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGGAAAAGCTACATGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201809.2 |
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| CDS TCA 72 bp | TCAATATTGTACCATACACATAAGCTGTTTCGGTTCTaGGCTACCAGCACATCACTCCCCGGAACCCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: SILYHTHKLFRF*ATSTSLPGTHC Trigger: GCAGTGGGTTCCGGGGAGTGATGTGCTGGTAGCTCAGAACCGAAACAGCTTATGTGTATGGTACAATATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041565.11 ENSMUST00000202589.2 |
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| CDS CCA 72 bp | TGCATTGCCTTTACAGTAACACTCAAGGGCCCGCTGTaGATTTCGAATCTTCTCAAAGAGATCACCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CIAFTVTLKGPL*ISNLLKEITCP Trigger: AGGGCAGGTGATCTCTTTGAGAAGATTCGAAATCCACAGCGGGCCCTTGAGTGTTACTGTAAAGGCAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CCA 72 bp | CACCATGTAGCTTTTCCTTCATGTCAGCTGGTTTGGTaGAGAACTTGTCTCTCCGCTCCCCATGTTCATCAT | + |
|
Preference number: 6 (lower is better) Translates to: HHVAFPSCQLVW*RTCLSAPHVHH Trigger: ATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGGAAAAGCTACATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201809.2 |
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| CDS CAA 72 bp | TGCAGACAAGTCACAGCACTCGTCTGGATGAACTTGTaGCAGATGACCTTCTTGTCTCCCCAATCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: CRQVTALVWMNL*QMTFLSPQSSP Trigger: TGGAGAAGATTGGGGAGACAAGAAGGTCATCTGCAACAAGTTCATCCAGACGAGTGCTGTGACTTGTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | AGATGCAGCCGAAGTTTCCGGTCTCTAAAGAGAAGCTaGTGTCCAGTCTCGTTAAGTTCTAGCCAATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RCSRSFRSLKRS*CPVSLSSSQST Trigger: GGTGGATTGGCTAGAACTTAACGAGACTGGACACAAGCTTCTCTTTAGAGACCGGAAACTTCGGCTGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
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| CDS CAA 72 bp | GTGCCTGGGCATAGCCACCTTCTCGGATCAGATGAGTaGCATACAAAGCCACATACTTGTGCAGAATCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPGHSHLLGSDE*HTKPHTCAESC Trigger: ACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | CTTTCACCATGTAGCTTTTCCTTCATGTCAGCTGGTTaGGTGGAGAACTTGTCTCTCCGCTCCCCATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSPCSFSFMSAG*VENLSLRSPCS Trigger: TGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGGAAAAGCTACATGGTGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201809.2 |
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| CDS CAA 90 bp | AAGCCATGCCTTTCACCATGTAGCTTTTCCTTCATGTCAGCTGGTTaGGTGGAGAACTTGTCTCTCCGCTCCCCATGTTCATCATACAGA | + |
|
Preference number: 6 (lower is better) Translates to: KPCLSPCSFSFMSAG*VENLSLRSPCSSYR Trigger: TCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGGAAAAGCTACATGGTGAAAGGCATGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201809.2 |
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| CDS CAA 90 bp | ATATCATATAGATGCAGCCGAAGTTTCCGGTCTCTAAAGAGAAGCTaGTGTCCAGTCTCGTTAAGTTCTAGCCAATCCACCCGGCTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ISYRCSRSFRSLKRS*CPVSLSSSQSTRLS Trigger: CGAAAGCCGGGTGGATTGGCTAGAACTTAACGAGACTGGACACAAGCTTCTCTTTAGAGACCGGAAACTTCGGCTGCATCTATATGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041565.11 ENSMUST00000202585.5 ENSMUST00000202589.2 |
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| CDS GCA 72 bp | TGCCTGGGCATAGCCACCTTCTCGGATCAGATGAGTTaGATACAAAGCCACATACTTGTGCAGAATCTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CLGIATFSDQMS*IQSHILVQNLV Trigger: TACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCATCTGATCCGAGAAGGTGGCTATGCCCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | CCAGCTCGGATGAATTCAGCTTCAGCCTCTTCAAATTaGCCCTCATCTTCCAGGTACATGGCGTATTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PARMNSASASSN*PSSSRYMAYLR Trigger: TCTCAAATACGCCATGTACCTGGAAGATGAGGGCAAATTTGAAGAGGCTGAAGCTGAATTCATCCGAGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | AGCTTTTCCTTCATGTCAGCTGGTTTGGTGGAGAACTaGTCTCTCCGCTCCCCATGTTCATCATACAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SFSFMSAGLVEN*SLRSPCSSYRS Trigger: ACTTCTGTATGATGAACATGGGGAGCGGAGAGACAAGTTCTCCACCAAACCAGCTGACATGAAGGAAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201809.2 |
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| CDS GCA 72 bp | CTTGTTCCACTCTTCCCCCTCAATGAAAGCATCGATTaGTTCTTTGACAAGGTCCAGGTTCAGATAGAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LVPLFPLNESID*FFDKVQVQIEF Trigger: GAACTCTATCTGAACCTGGACCTTGTCAAAGAAGCAATCGATGCTTTCATTGAGGGGGAAGAGTGGAACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | CTCAGCAATCTCATACTCCTGCAGAGACGCATAGTGTaGAGCCACACGAGGATAGTATTTAGATGCAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSNLILLQRRIV*SHTRIVFRCSV Trigger: AACACTGCATCTAAATACTATCCTCGTGTGGCTCAACACTATGCGTCTCTGCAGGAGTATGAGATTGCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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| CDS CAA 72 bp | GTCTTGATGGCCATAAGAAACTTGTTCCAGTTGTCTTaGTTAGCAGCCTTCCCAGGCCGCTTAAATTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: VLMAIRNLFQLS*LAAFPGRLNSI Trigger: AATTGAATTTAAGCGGCCTGGGAAGGCTGCTAACAAAGACAACTGGAACAAGTTTCTTATGGCCATCAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041565.11 |
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