Pregenerated sensors for IFRD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010048Ensembl transcript IDs: ENSMUST00000010192.11, ENSMUST00000193140.2, ENSMUST00000195725.6, ENSMUST00000195746.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AAATGGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTaGTGTCGGTGGCTAGGGTACGCAGAGATCCACAGAGGGCCTCCA | + |
Preference number: 1 (lower is better) Translates to: KWSAGAAGQPWHGTY*CRWLGYAEIHRGPP Trigger: TGGAGGCCCTCTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR CCA 90 bp | GCAGCACAGCTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTTaGCACGGTACTTATTGCTGTCGGTGGCTAGGGTACGCAGAGATC | + |
Preference number: 1 (lower is better) Translates to: AAQLGKWSAGAAGQP*HGTYCCRWLGYAEI Trigger: GATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR CCA 90 bp | GCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTGCTGTCGGTaGCTAGGGTACGCAGAGATCCACAGAGGGCCTCCATGTCTTCAT | + |
Preference number: 1 (lower is better) Translates to: AGAAGQPWHGTYCCR*LGYAEIHRGPPCLH Trigger: ATGAAGACATGGAGGCCCTCTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR GCA 90 bp | CTCGTTGGCCAGTCTGATTCACAAGATATCTGCCCGCTTGTCCCTTaGACGACTACGGGCCTTGGTCCGGGCTTTGAAGGCTGCAGCATT | + |
Preference number: 1 (lower is better) Translates to: LVGQSDSQDICPLVP*TTTGLGPGFEGCSI Trigger: AATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR GCA 90 bp | GGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATTCACAAGATATCTaGCCGCTTGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTT | + |
Preference number: 1 (lower is better) Translates to: GMGSLLVGQSDSQDI*PLVPCTTTGLGPGF Trigger: AAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAACGAGAAGGCTACCCATACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR TCA 90 bp | CTGCCCGCTTGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTTaGAGGCTGCAGCATTGTACAGGTGCTTTTCAAAGCGTGAAATCT | + |
Preference number: 1 (lower is better) Translates to: LPACPLHDYGPWSGL*RLQHCTGAFQSVKS Trigger: AGATTTCACGCTTTGAAAAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CCA 90 bp | ATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTAAAAATATaGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATTCACAA | + |
Preference number: 1 (lower is better) Translates to: ITGRDQFLHCLLLKI*YGMGSLLVGQSDSQ Trigger: TTGTGAATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CAA 90 bp | AAAATGGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATaGCTGTCGGTGGCTAGGGTACGCAGAGATCCACAGAGGGCCTCC | + |
Preference number: 2 (lower is better) Translates to: KMERWRRRSTLARYL*LSVARVRRDPQRAS Trigger: GGAGGCCCTCTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR-3UTR CCA 90 bp | TCAAGGTCCCGGGCAAGCTCAAAGAGTAGCGCGATGGCTTCACCAGCAGCAATCTCACTGGACAAGAGCTaGGGCAGCCGGGGCAGCTGC | + |
Preference number: 2 (lower is better) Translates to: SRSRASSKSSAMASPAAISLDKS*GSRGSC Trigger: GCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAGTGA...GATTGCTGCTGGTGAAGCCATCGCGCTACTCTTTGAGCTTGCCCGGGACCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR-3UTR CCA 90 bp | GCACAGCTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTGGTTCACACTTTCACTaGACAAGAGCTGGGGCAGCC | + |
Preference number: 2 (lower is better) Translates to: AQLGKWSAGAAGQPWHGTGSHFH*TRAGAA Trigger: GGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACC...AGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR-3UTR GCA 90 bp | GCCCGCTTGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTTGAAGGCTGCACAAAGCGTGAAATCTTaGAGGCCTTCAGGGCAGCAG | + |
Preference number: 2 (lower is better) Translates to: ARLSLARLRALVRALKAAQSVKS*RPSGQQ Trigger: CTGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTG...TGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CAA 90 bp | GTAGCCTTCTCGTTGGCCAGTCTGATTCACAAGATATCTGCCCGCTaGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTTGAAGGCT | + |
Preference number: 2 (lower is better) Translates to: VAFSLASLIHKISAR*SLARLRALVRALKA Trigger: AGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAACGAGAAGGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CAA 90 bp | TCTGCCCGCTTGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTaGAAGGCTGCAGCATTGTACAGGTGCTTTTCAAAGCGTGAAATC | + |
Preference number: 2 (lower is better) Translates to: SARLSLARLRALVRA*KAAALYRCFSKREI Trigger: GATTTCACGCTTTGAAAAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CAA 90 bp | ATTCACAAGATATCTGCCCGCTTGTCCCTTGCACGACTACGGGCCTaGGTCCGGGCTTTGAAGGCTGCAGCATTGTACAGGTGCTTTTCA | + |
Preference number: 2 (lower is better) Translates to: IHKISARLSLARLRA*VRALKAAALYRCFS Trigger: TGAAAAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR-3UTR TCA 90 bp | GTTGGCCAGTCTGATTCACAAGATATCTGCCCGCTTGTCCCTTGCACGACTACGGTGCTTTTCAAAGCGTaGAATCTTGCAGGCCTTCAG | + |
Preference number: 2 (lower is better) Translates to: VGQSDSQDICPLVPCTTTVLFKA*NLAGLQ Trigger: CTGAAGGCCTGCAAGATTTCACGCTTTGAAAAGCAC...CGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR-3UTR GCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTATGCCCGCTTGTCCCTTaGACGACTACGGGCCTTGGT | + |
Preference number: 2 (lower is better) Translates to: KNKVTITGRDQFLHCLLLCPLVP*TTTGLG Trigger: ACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCA...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR-3UTR TCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTACCACAGCCACAGAGCTaGGTGCACATACAAAGGGCT | + |
Preference number: 2 (lower is better) Translates to: KNKVTITGRDQFLHCLLLPQPQS*VHIQRA Trigger: AGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGG...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 |
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3UTR-3UTR CCA 90 bp | GCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGTCTTCTGTTAAAAATATaGTATGGTATGGGTAGCCTT | + |
Preference number: 2 (lower is better) Translates to: AHTSIIGSFAYPMPWRPGLLLKI*YGMGSL Trigger: AAGGCTACCCATACCATACCATATTTTTAACAGAAG...ACCTGGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR-3UTR CCA 90 bp | CTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATTCACTTCTGTTAAAAATATaGTATGGTATGGGTAGCCTT | + |
Preference number: 2 (lower is better) Translates to: LLKIWYGMGSLLVGQSDSLLLKI*YGMGSL Trigger: AAGGCTACCCATACCATACCATATTTTTAACAGAAG...TGAATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR-3UTR CCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTACTTCTGTTAAAAATATaGTATGGTATGGGTAGCCTT | + |
Preference number: 2 (lower is better) Translates to: KNKVTITGRDQFLHCLLLLLLKI*YGMGSL Trigger: AAGGCTACCCATACCATACCATATTTTTAACAGAAG...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 ENSMUST00000195746.2 |
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3UTR GCA 72 bp | GCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTaGTGTCGGTGGCTAGGGTACGCAGAGATCCACAGA | + |
Preference number: 3 (lower is better) Translates to: AGAAGQPWHGTY*CRWLGYAEIHR Trigger: TCTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR CCA 72 bp | CTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTTaGCACGGTACTTATTGCTGTCGGTGGCTAGGGTAC | + |
Preference number: 3 (lower is better) Translates to: LGKWSAGAAGQP*HGTYCCRWLGY Trigger: GTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR CCA 72 bp | GCCGGTCAACCTTGGCACGGTACTTATTGCTGTCGGTaGCTAGGGTACGCAGAGATCCACAGAGGGCCTCCA | + |
Preference number: 3 (lower is better) Translates to: AGQPWHGTYCCR*LGYAEIHRGPP Trigger: TGGAGGCCCTCTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR GCA 72 bp | CAGTCTGATTCACAAGATATCTGCCCGCTTGTCCCTTaGACGACTACGGGCCTTGGTCCGGGCTTTGAAGGC | + |
Preference number: 3 (lower is better) Translates to: QSDSQDICPLVP*TTTGLGPGFEG Trigger: GCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR TCA 72 bp | TGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCTTTaGAGGCTGCAGCATTGTACAGGTGCTTTTCAAAGC | + |
Preference number: 3 (lower is better) Translates to: CPLHDYGPWSGL*RLQHCTGAFQS Trigger: GCTTTGAAAAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR GCA 72 bp | AGCCTTCTCGTTGGCCAGTCTGATTCACAAGATATCTaGCCGCTTGTCCCTTGCACGACTACGGGCCTTGGT | + |
Preference number: 3 (lower is better) Translates to: SLLVGQSDSQDI*PLVPCTTTGLG Trigger: ACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAACGAGAAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CCA 72 bp | TCTAGGACCGTTAGCCCTCCAGGACCGGCACACATTTaGTTTTACCTGAGACAGGACAGGAAGAGGCCACAG | + |
Preference number: 3 (lower is better) Translates to: SRTVSPPGPAHI*FYLRQDRKRPQ Trigger: CTGTGGCCTCTTCCTGTCCTGTCTCAGGTAAAACCAAATGTGTGCCGGTCCTGGAGGGCTAACGGTCCTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR-3UTR CAA 90 bp | GCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGTAGGACCGGCACACATTaGGTTTTACCTGAGACAGGA | + |
Preference number: 3 (lower is better) Translates to: AHTSIIGSFAYPMPWRPGRTGTH*VLPETG Trigger: TCCTGTCTCAGGTAAAACCAAATGTGTGCCGGTCCT...ACCTGGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR-3UTR CAA 90 bp | AAGGTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCTTGACCCTCCCACATTaGTCTATTTTTGGTTTCATC | + |
Preference number: 3 (lower is better) Translates to: KVYKTGMVLSHHPPCPLVLTLPH*SIFGFI Trigger: GATGAAACCAAAAATAGACAAATGTGGGAGGGTCAA...GACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR-3UTR CAA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATAAGTGTCCTGATCCCTaGACCCTCCCACATTTGTCT | + |
Preference number: 3 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDKCPDP*TLPHLS Trigger: AGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 |
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3UTR-3UTR CAA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGGCAGGGACCAGTTCTaGCACTGTCTTCTGTTAAAA | + |
Preference number: 3 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDGRDQF*HCLLLK Trigger: TTTTAACAGAAGACAGTGCAAGAACTGGTCCCTGCC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 ENSMUST00000195746.2 |
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3UTR-3UTR CAA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTGGCAGGGACCAGTTCTaGCACTGTCTTCTGTTAAAA | + |
Preference number: 3 (lower is better) Translates to: KCPDPLTLPHLSIFGFIIGRDQF*HCLLLK Trigger: TTTTAACAGAAGACAGTGCAAGAACTGGTCCCTGCC...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 |
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3UTR TCA 72 bp | CATACAAAGGGCTTGAGTCTAAGTGTCCTGATCCCTTaGCCCTCCCACATTTGTCTATTTTTGGTTTCATCA | + |
Preference number: 3 (lower is better) Translates to: HTKGLSLSVLIP*PSHICLFLVSS Trigger: TGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTTAGACTCAAGCCCTTTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 |
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3UTR-3UTR CAA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTATTGACCCTCCCACATTaGTCTATTTTTGGTTTCATC | + |
Preference number: 3 (lower is better) Translates to: KNKVTITGRDQFLHCLLLLTLPH*SIFGFI Trigger: GATGAAACCAAAAATAGACAAATGTGGGAGGGTCAA...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 ENSMUST00000195746.2 |
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CDS-3UTR TCA 90 bp | AGAGGGCCTCCATGTCTTCATAGACGAAGTCCTCCTCAAGGTCCCGGGCAAGCTCCTCCTCCACGGCGCTaGCCGCCCTTGCGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: RGPPCLHRRSPPQGPGQAPPPRR*PPLRSA Trigger: TGCGCTCCGCAAGGGCGGTCAGCGCCGTGGAGGAGG...AGCTTGCCCGGGACCTTGAGGAGGACTTCGTCTATGAAGACATGGAGGCCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR GCA 90 bp | TCCCGGGCAAGCTCAAAGAGTAGCGCGATGGCTTCACCAGCAGCAATCCGCAGGGGCGCTGACCGCCCTTaGGGAGCGCATTGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: SRASSKSSAMASPAAIRRGADRP*GAHCPS Trigger: GGAAGGGCAATGCGCTCCGCAAGGGCGGTCAGCGCC...CCTGCGGATTGCTGCTGGTGAAGCCATCGCGCTACTCTTTGAGCTTGCCCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | TGCCTACCCTATGCCATGGAGGCCAGGTGCCAGACCCCCAAGGGAAGCAGCCCCGCACAGAGAAGGCCATaGAGGCTGGCGGGAACCAGA | + |
Preference number: 4 (lower is better) Translates to: CLPYAMEARCQTPKGSSPAQRRP*RLAGTR Trigger: TCTGGTTCCCGCCAGCCTCCATGGCCTTCTCTGTGC...GGGGCTGCTTCCCTTGGGGGTCTGGCACCTGGCCTCCATGGCATAGGGTAGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | CCGCAGGTTCACACTTTCACTGGACAAGAGCTGGGGCAGCCGGGGCAGCTGCCTAGTCAGCCTGGGTACTaGTCCTGGCACCTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: PQVHTFTGQELGQPGQLPSQPGY*SWHLLH Trigger: GTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACT...AGGCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACCTGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | GCTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTGGGCTGGGACAGTCACTaGTGGTGCTCCGGGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: ARKMERWRRRSTLARYLLGWDSH*WCSGPH Trigger: GTGAGGCCCGGAGCACCACCAGTGACTGTCCCAGCC...CAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | TGCCTACCCTATGCCATGGAGGCCAGGTGCCAGACCCCCAAGGGAAGCAGCCCCGCCGCCGGTCAACCTTaGCACGGTACTTATTGCTGT | + |
Preference number: 4 (lower is better) Translates to: CLPYAMEARCQTPKGSSPAAGQP*HGTYCC Trigger: ACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGC...GGGGCTGCTTCCCTTGGGGGTCTGGCACCTGGCCTCCATGGCATAGGGTAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR CAA 72 bp | CGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATaGCTGTCGGTGGCTAGGGTACGCAGAGATCCACAG | + |
Preference number: 4 (lower is better) Translates to: RWRRRSTLARYL*LSVARVRRDPQ Trigger: CTGTGGATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR GCA 90 bp | TGCCTACCCTATGCCATGGAGGCCAGGTGCCAGACCCCCAAGGGAAGCAGCCCCTGGCACGGTACTTATTaGTGTCGGTGGCTAGGGTAC | + |
Preference number: 4 (lower is better) Translates to: CLPYAMEARCQTPKGSSPWHGTY*CRWLGY Trigger: GTACCCTAGCCACCGACAGCAATAAGTACCGTGCCA...GGGGCTGCTTCCCTTGGGGGTCTGGCACCTGGCCTCCATGGCATAGGGTAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | CACAGAGGGCCTCCATGTCTTCATAGACGAAGTCCTCCTCAAGGTCCCGGGCAACCTGGGTACTGCTCCTaGCACCTCCTCCACGGCGCT | + |
Preference number: 4 (lower is better) Translates to: HRGPPCLHRRSPPQGPGQPGYCS*HLLHGA Trigger: AGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGG...TTGCCCGGGACCTTGAGGAGGACTTCGTCTATGAAGACATGGAGGCCCTCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | CCTCCTCAAGGTCCCGGGCAAGCTCAAAGAGTAGCGCGATGGCTTCACCAGCAGGAGCCAGAGTCAGCCTaGGTACTGCTCCTGGCACCT | + |
Preference number: 4 (lower is better) Translates to: PPQGPGQAQRVARWLHQQEPESA*VLLLAP Trigger: AGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTC...CTGCTGGTGAAGCCATCGCGCTACTCTTTGAGCTTGCCCGGGACCTTGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | GAGGGCCTCCATGTCTTCATAGACGAAGTCCTCCTCAAGGTCCCGGGCAAGCTCTGCTCCGGGCCTCACTaGCCGCTTCATCCTCACTGG | + |
Preference number: 4 (lower is better) Translates to: EGLHVFIDEVLLKVPGKLCSGPH*PLHPHW Trigger: CCAGTGAGGATGAAGCGGCCAGTGAGGCCCGGAGCA...GAGCTTGCCCGGGACCTTGAGGAGGACTTCGTCTATGAAGACATGGAGGCCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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3UTR CAA 72 bp | GCTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTaGGCACGGTACTTATTGCTGTCGGTGGCTAGGGTA | + |
Preference number: 4 (lower is better) Translates to: ARKMERWRRRST*ARYLLLSVARV Trigger: TACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | CATAGACGAAGTCCTCCTCAAGGTCCCGGGCAAGCTCAAAGAGTAGCGCGATGGTGGGACAGTCACTGGTaGTGCTCCGGGCCTCACTGG | + |
Preference number: 4 (lower is better) Translates to: HRRSPPQGPGQAQRVARWWDSHW*CSGPHW Trigger: CCAGTGAGGCCCGGAGCACCACCAGTGACTGTCCCA...CCATCGCGCTACTCTTTGAGCTTGCCCGGGACCTTGAGGAGGACTTCGTCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR CCA 90 bp | CAGCAATCCGCAGGTTCACACTTTCACTGGACAAGAGCTGGGGCAGCCGGGGCACTCCTTGACGGGTCTTaGCACTCTTGTCAGTCAGGC | + |
Preference number: 4 (lower is better) Translates to: QQSAGSHFHWTRAGAAGALLDGS*HSCQSG Trigger: GCCTGACTGACAAGAGTGCCAAGACCCGTCAAGGAG...TGCCCCGGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACCTGCGGATTGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR TCA 90 bp | CCTCCATGTCTTCATAGACGAAGTCCTCCTCAAGGTCCCGGGCAAGCTCAAAGACCTCTGTGGTGGCGCTaGGAAGGCTGGGACAGTCAC | + |
Preference number: 4 (lower is better) Translates to: PPCLHRRSPPQGPGQAQRPLWWR*EGWDSH Trigger: GTGACTGTCCCAGCCTTCTCAGCGCCACCACAGAGG...TCTTTGAGCTTGCCCGGGACCTTGAGGAGGACTTCGTCTATGAAGACATGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR GCA 90 bp | GTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTAGGCAGCCGGGGCAGCTaGCTGTCAAGGATATGGCTG | + |
Preference number: 4 (lower is better) Translates to: VYKTGMVLSHHPPCPLVLGSRGS*LSRIWL Trigger: CAGCCATATCCTTGACAGGCAGCTGCCCCGGCTGCC...TAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | GCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGTTGCTCCGGGCCTCACTaGCCGCTTCATCCTCACTGG | + |
Preference number: 4 (lower is better) Translates to: AHTSIIGSFAYPMPWRPGCSGPH*PLHPHW Trigger: CCAGTGAGGATGAAGCGGCCAGTGAGGCCCGGAGCA...ACCTGGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTGTGGCTGGGACAGTCACTaGTGGTGCTCCGGGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: RGHSHRAECTYKGLESKCGWDSH*WCSGPH Trigger: GTGAGGCCCGGAGCACCACCAGTGACTGTCCCAGCC...ACACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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3UTR CAA 72 bp | ATATCTGCCCGCTTGTCCCTTGCACGACTACGGGCCTaGGTCCGGGCTTTGAAGGCTGCAGCATTGTACAGG | + |
Preference number: 4 (lower is better) Translates to: ISARLSLARLRA*VRALKAAALYR Trigger: CCTGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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3UTR CAA 72 bp | TCGTTGGCCAGTCTGATTCACAAGATATCTGCCCGCTaGTCCCTTGCACGACTACGGGCCTTGGTCCGGGCT | + |
Preference number: 4 (lower is better) Translates to: SLASLIHKISAR*SLARLRALVRA Trigger: AGCCCGGACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGACTGGCCAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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CDS-3UTR GCA 90 bp | ACCAGCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGTCAGCCTGGGTACTaGTCCTGGCACCTCCTCCAC | + |
Preference number: 4 (lower is better) Translates to: TSTHIHYRQLCLPYAMEASQPGY*SWHLLH Trigger: GTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACT...GGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | AAGGTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCCGGGCAGTGGGGCTTaGTGTACTGTCACTGAGCAC | + |
Preference number: 4 (lower is better) Translates to: KVYKTGMVLSHHPPCPLVPGSGA*CTVTEH Trigger: GTGCTCAGTGACAGTACAGCAAGCCCCACTGCCCGG...GACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | GAAGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTGATGGTGAGCAGCAATaGCCAGGCCTGCAGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: EEATATELSAHTKGLSLSDGEQQ*PGLQGS Trigger: GCTGCCCTGCAGGCCTGGGCATTGCTGCTCACCATC...ACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | GTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTAGAGCCAGAGTCAGCCTaGGTACTGCTCCTGGCACCT | + |
Preference number: 4 (lower is better) Translates to: VYKTGMVLSHHPPCPLVLEPESA*VLLLAP Trigger: AGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTC...TAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | GTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTACCGCTTCATCCTCACTaGAGCCAGAGTCAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: VYKTGMVLSHHPPCPLVLPLHPH*SQSQPG Trigger: CCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCGG...TAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTGTTGGGACAGTCACTGGTaGTGCTCCGGGCCTCACTGG | + |
Preference number: 4 (lower is better) Translates to: RGHSHRAECTYKGLESKCWDSHW*CSGPHW Trigger: CCAGTGAGGCCCGGAGCACCACCAGTGACTGTCCCA...ACACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AATGGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTGCTGTCGGTAGGATATGGCTGATGTaGGTACCAGGACAGATGGTG | + |
Preference number: 4 (lower is better) Translates to: NGALAPPVNLGTVLIAVGRIWLM*VPGQMV Trigger: CACCATCTGTCCTGGTACCCACATCAGCCATATCCT...ACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195725.6 |
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CDS-3UTR TCA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTCCTCCTCCACGGCGCTaGCCGCCCTTGCGGAGCGCA | + |
Preference number: 4 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSPPPRR*PPLRSA Trigger: TGCGCTCCGCAAGGGCGGTCAGCGCCGTGGAGGAGG...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | TATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTAGGTAGAGCAGAAGCACAATaGAGCCGGGCAGTGGGGCTT | + |
Preference number: 4 (lower is better) Translates to: YKTGMVLSHHPPCPLVLGRAEAQ*SRAVGL Trigger: AAGCCCCACTGCCCGGCTCCATTGTGCTTCTGCTCT...ACCTAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR TCA 90 bp | GCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGTCCTTGGTCCGGGCTTTaGAGGCTGCAGCATTGTACA | + |
Preference number: 4 (lower is better) Translates to: AHTSIIGSFAYPMPWRPGPWSGL*RLQHCT Trigger: TGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGG...ACCTGGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTGTAATGGAGCCGGGCAGTaGGGCTTGCTGTACTGTCAC | + |
Preference number: 4 (lower is better) Translates to: RGHSHRAECTYKGLESKCNGAGQ*GLLYCH Trigger: GTGACAGTACAGCAAGCCCCACTGCCCGGCTCCATT...ACACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AAGGTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCGGTTCACACTTTCACTaGACAAGAGCTGGGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: KVYKTGMVLSHHPPCPLVGSHFH*TRAGAA Trigger: GGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACC...GACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGGCGCTGACCGCCCTTaGGGAGCGCATTGCCCTTCC | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDGADRP*GAHCPS Trigger: GGAAGGGCAATGCGCTCCGCAAGGGCGGTCAGCGCC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | ACCAGCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCCCGGGCTTTGAAGGCTaGAGCATTGTACAGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: TSTHIHYRQLCLPYAMEAPGFEG*SIVQVL Trigger: AAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGG...GGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATCCTGGGTACTGCTCCTaGCACCTCCTCCACGGCGCT | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDPGYCS*HLLHGA Trigger: AGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGG...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | ACCAGCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGATATGGCTGATGTaGGTACCAGGACAGATGGTG | + |
Preference number: 4 (lower is better) Translates to: TSTHIHYRQLCLPYAMEARIWLM*VPGQMV Trigger: CACCATCTGTCCTGGTACCCACATCAGCCATATCCT...GGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGCACAGCTCGGAAAATaGAGCGCTGGCGCCGCCGGT | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDAQLGK*SAGAAG Trigger: ACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR TCA 90 bp | GAAGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTTGTCAAGGATATGGCTaGTGTGGGTACCAGGACAGA | + |
Preference number: 4 (lower is better) Translates to: EEATATELSAHTKGLSLSCQGYG*CGYQDR Trigger: TCTGTCCTGGTACCCACATCAGCCATATCCTTGACA...ACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTAGACAGTCACTGGTGGTaGTCCGGGCCTCACTGGCCG | + |
Preference number: 4 (lower is better) Translates to: KNKVTITGRDQFLHCLLLDSHWW*SGPHWP Trigger: CGGCCAGTGAGGCCCGGAGCACCACCAGTGACTGTC...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | ACCAGCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCGGAGGTGATAGTGTATaGCAGAGCCCAACACATCTT | + |
Preference number: 4 (lower is better) Translates to: TSTHIHYRQLCLPYAMEAGGDSV*QSPTHL Trigger: AAGATGTGTTGGGCTCTGGCATACACTATCACCTCC...GGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | TCTGATTCACAAGATATCTGCCCGCTTGTCCCTTGCACGACTACGGGCCTTGGTGGAGGTGATAGTGTATaGCAGAGCCCAACACATCTT | + |
Preference number: 4 (lower is better) Translates to: SDSQDICPLVPCTTTGLGGGDSV*QSPTHL Trigger: AAGATGTGTTGGGCTCTGGCATACACTATCACCTCC...ACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAGATATCTTGTGAATCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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CDS-3UTR CCA 90 bp | GAAGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTTGCCTGTCAAGGATATaGCTGATGTGGGTACCAGGA | + |
Preference number: 4 (lower is better) Translates to: EEATATELSAHTKGLSLSCLSRI*LMWVPG Trigger: TCCTGGTACCCACATCAGCCATATCCTTGACAGGCA...ACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTTCACTGGACAAGAGCTaGGGCAGCCGGGGCAGCTGC | + |
Preference number: 4 (lower is better) Translates to: KCPDPLTLPHLSIFGFIISLDKS*GSRGSC Trigger: GCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAGTGA...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTAGCACAGCTCGGAAAATaGAGCGCTGGCGCCGCCGGT | + |
Preference number: 4 (lower is better) Translates to: KNKVTITGRDQFLHCLLLAQLGK*SAGAAG Trigger: ACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGC...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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3UTR CAA 72 bp | GCAGCATTGTACAGGTGCTTTTCAAAGCGTGAAATCTaGCAGGCCTTCAGGGCAGCAGCATCCAACACTAGC | + |
Preference number: 4 (lower is better) Translates to: AALYRCFSKREI*QAFRAAASNTS Trigger: GCTAGTGTTGGATGCTGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTGAAAAGCACCTGTACAATGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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CDS-3UTR TCA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTCCTCTGTGGTGGCGCTaGGAAGGCTGGGACAGTCAC | + |
Preference number: 4 (lower is better) Translates to: KCPDPLTLPHLSIFGFIIPLWWR*EGWDSH Trigger: GTGACTGTCCCAGCCTTCTCAGCGCCACCACAGAGG...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR TCA 90 bp | AGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTGTGTGCTTTTCAAAGCGTaGAATCTTGCAGGCCTTCAG | + |
Preference number: 4 (lower is better) Translates to: RGHSHRAECTYKGLESKCVLFKA*NLAGLQ Trigger: CTGAAGGCCTGCAAGATTTCACGCTTTGAAAAGCAC...ACACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTTGCCCGCTTGTCCCTTaGACGACTACGGGCCTTGGT | + |
Preference number: 4 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSCPLVP*TTTGLG Trigger: ACCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCA...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CCA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTACAGCTCCTCGCCCTTaGGTCCAGGGCCCAACTGCA | + |
Preference number: 4 (lower is better) Translates to: KCPDPLTLPHLSIFGFIITAPRP*VQGPTA Trigger: TGCAGTTGGGCCCTGGACCCAAGGGCGAGGAGCTGT...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR TCA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTTACCAGGACAGATGGTaGGCAGCAATGCCCAGGCCT | + |
Preference number: 4 (lower is better) Translates to: KCPDPLTLPHLSIFGFIIYQDRW*AAMPRP Trigger: AGGCCTGGGCATTGCTGCTCACCATCTGTCCTGGTA...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGCCGCCGGTCAACCTTaGCACGGTACTTATTGCTGT | + |
Preference number: 4 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSAAGQP*HGTYCC Trigger: ACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGC...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR TCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTACCTTGGTCCGGGCTTTaGAGGCTGCAGCATTGTACA | + |
Preference number: 4 (lower is better) Translates to: KNKVTITGRDQFLHCLLLPWSGL*RLQHCT Trigger: TGTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGG...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR GCA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTTGGCACGGTACTTATTaGTGTCGGTGGCTAGGGTAC | + |
Preference number: 4 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSWHGTY*CRWLGY Trigger: GTACCCTAGCCACCGACAGCAATAAGTACCGTGCCA...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR GCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATCAAAGCGTGAAATCTTaGAGGCCTTCAGGGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDQSVKS*RPSGQQ Trigger: CTGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTG...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR GCA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTCAAAGCGTGAAATCTTaGAGGCCTTCAGGGCAGCAG | + |
Preference number: 4 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSQSVKS*RPSGQQ Trigger: CTGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTG...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR GCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATCCGGGCTTTGAAGGCTaGAGCATTGTACAGGTGCTT | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDPGFEG*SIVQVL Trigger: AAGCACCTGTACAATGCTGCAGCCTTCAAAGCCCGG...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CCA 90 bp | AAGTGTCCTGATCCCTTGACCCTCCCACATTTGTCTATTTTTGGTTTCATCATTCTCCTTGACGGGTCTTaGCACTCTTGTCAGTCAGGC | + |
Preference number: 4 (lower is better) Translates to: KCPDPLTLPHLSIFGFIILLDGS*HSCQSG Trigger: GCCTGACTGACAAGAGTGCCAAGACCCGTCAAGGAG...AATGATGAAACCAAAAATAGACAAATGTGGGAGGGTCAAGGGATCAGGACACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTACAAAGAGTAGCGCGATaGCTTCACCAGCAGCAATCC | + |
Preference number: 4 (lower is better) Translates to: KNKVTITGRDQFLHCLLLQRVAR*LHQQQS Trigger: GGATTGCTGCTGGTGAAGCCATCGCGCTACTCTTTG...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR GCA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGGAGGTGATAGTGTATaGCAGAGCCCAACACATCTT | + |
Preference number: 4 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDGGDSV*QSPTHL Trigger: AAGATGTGTTGGGCTCTGGCATACACTATCACCTCC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 ENSMUST00000195746.2 |
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CDS-3UTR TCA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTAGTGCTTTTCAAAGCGTaGAATCTTGCAGGCCTTCAG | + |
Preference number: 4 (lower is better) Translates to: KNKVTITGRDQFLHCLLLVLFKA*NLAGLQ Trigger: CTGAAGGCCTGCAAGATTTCACGCTTTGAAAAGCAC...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS GCA 90 bp | CACTGGCCGCTTCATCCTCACTGGAGCCAGAGTCAGCCTGGGTACTaGTCCTGGCACCTCCTCCACGGCGCTGACCGCCCTTGCGGAGCG | + |
Preference number: 5 (lower is better) Translates to: HWPLHPHWSQSQPGY*SWHLLHGADRPCGA Trigger: CGCTCCGCAAGGGCGGTCAGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCGGCCAGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS TCA 90 bp | GTTCGTCCACCGCTTCGCCACCCAGGCAGTCCTCTGTGGTGGCGCTaGGAAGGCTGGGACAGTCACTGGTGGTGCTCCGGGCCTCACTGG | + |
Preference number: 5 (lower is better) Translates to: VRPPLRHPGSPLWWR*EGWDSHWWCSGPHW Trigger: CCAGTGAGGCCCGGAGCACCACCAGTGACTGTCCCAGCCTTCTCAGCGCCACCACAGAGGACTGCCTGGGTGGCGAAGCGGTGGACGAAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS CCA 90 bp | CCGCTTCATCCTCACTGGAGCCAGAGTCAGCCTGGGTACTGCTCCTaGCACCTCCTCCACGGCGCTGACCGCCCTTGCGGAGCGCATTGC | + |
Preference number: 5 (lower is better) Translates to: PLHPHWSQSQPGYCS*HLLHGADRPCGAHC Trigger: GCAATGCGCTCCGCAAGGGCGGTCAGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS CCA 90 bp | GTGAGCAGCAATGCCCAGGCCTGCAGGGCAGCACAGAGAAGGCCATaGAGGCTGGCGGGAACCAGAGACGCCGCAGAGCCACTAGTGCCA | + |
Preference number: 5 (lower is better) Translates to: VSSNAQACRAAQRRP*RLAGTRDAAEPLVP Trigger: TGGCACTAGTGGCTCTGCGGCGTCTCTGGTTCCCGCCAGCCTCCATGGCCTTCTCTGTGCTGCCCTGCAGGCCTGGGCATTGCTGCTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 90 bp | AGTCACTGGTGGTGCTCCGGGCCTCACTGGCCGCTTCATCCTCACTaGAGCCAGAGTCAGCCTGGGTACTGCTCCTGGCACCTCCTCCAC | + |
Preference number: 5 (lower is better) Translates to: SHWWCSGPHWPLHPH*SQSQPGYCSWHLLH Trigger: GTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGGATGAAGCGGCCAGTGAGGCCCGGAGCACCACCAGTGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS GCA 90 bp | GTGGGGCTTGCTGTACTGTCACTGAGCACCGAGATGAGCAAGGGCTaGAGGCTACGGAACAGCTCCTCGCCCTTGGGTCCAGGGCCCAAC | + |
Preference number: 5 (lower is better) Translates to: VGLAVLSLSTEMSKG*RLRNSSSPLGPGPN Trigger: GTTGGGCCCTGGACCCAAGGGCGAGGAGCTGTTCCGTAGCCTGCAGCCCTTGCTCATCTCGGTGCTCAGTGACAGTACAGCAAGCCCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS GCA 90 bp | TGCAGGCTACGGAACAGCTCCTCGCCCTTGGGTCCAGGGCCCAACTaGACACAGAGAATGCCTAGCACAGCAGCAGCCAGAGCCTGTTCT | + |
Preference number: 5 (lower is better) Translates to: CRLRNSSSPLGPGPN*TQRMPSTAAARACS Trigger: AGAACAGGCTCTGGCTGCTGCTGTGCTAGGCATTCTCTGTGTGCAGTTGGGCCCTGGACCCAAGGGCGAGGAGCTGTTCCGTAGCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS GCA 90 bp | ACCCAAGCCAAGAGCAGAAGCACAATGGAGCCGGGCAGTGGGGCTTaGTGTACTGTCACTGAGCACCGAGATGAGCAAGGGCTGCAGGCT | + |
Preference number: 5 (lower is better) Translates to: TQAKSRSTMEPGSGA*CTVTEHRDEQGLQA Trigger: AGCCTGCAGCCCTTGCTCATCTCGGTGCTCAGTGACAGTACAGCAAGCCCCACTGCCCGGCTCCATTGTGCTTCTGCTCTTGGCTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 90 bp | GCGCGATGGCTTCACCAGCAGCAATCCGCAGGTTCACACTTTCACTaGACAAGAGCTGGGGCAGCCGGGGCAGCTGCCTGTCAAGGATAT | + |
Preference number: 5 (lower is better) Translates to: ARWLHQQQSAGSHFH*TRAGAAGAAACQGY Trigger: ATATCCTTGACAGGCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACCTGCGGATTGCTGCTGGTGAAGCCATCGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 90 bp | TCACCAGCAGCAATCCGCAGGTTCACACTTTCACTGGACAAGAGCTaGGGCAGCCGGGGCAGCTGCCTGTCAAGGATATGGCTGATGTGG | + |
Preference number: 5 (lower is better) Translates to: SPAAIRRFTLSLDKS*GSRGSCLSRIWLMW Trigger: CCACATCAGCCATATCCTTGACAGGCAGCTGCCCCGGCTGCCCCAGCTCTTGTCCAGTGAAAGTGTGAACCTGCGGATTGCTGCTGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 90 bp | TCACCACCCTCAACAAAGTGCAGCACAGCTCGGAAAATGGAGCGCTaGCGCCGCCGGTCAACCTTGGCACGGTACTTATTGCTGTCGGTG | + |
Preference number: 5 (lower is better) Translates to: SPPSTKCSTARKMER*RRRSTLARYLLLSV Trigger: CACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGCTGCACTTTGTTGAGGGTGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | AAGGTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCAACAGCTCCTCGCCCTaGGGTCCAGGGCCCAACTGC | + |
Preference number: 5 (lower is better) Translates to: KVYKTGMVLSHHPPCPLVNSSSP*GPGPNC Trigger: GCAGTTGGGCCCTGGACCCAAGGGCGAGGAGCTGTT...GACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGACCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 90 bp | CCTCACATTCACCACCCTCAACAAAGTGCAGCACAGCTCGGAAAATaGAGCGCTGGCGCCGCCGGTCAACCTTGGCACGGTACTTATTGC | + |
Preference number: 5 (lower is better) Translates to: PHIHHPQQSAAQLGK*SAGAAGQPWHGTYC Trigger: GCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGCTGCACTTTGTTGAGGGTGGTGAATGTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | TATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTAGGTGCACGACTACGGGCCTaGGTCCGGGCTTTGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: YKTGMVLSHHPPCPLVLGARLRA*VRALKA Trigger: AGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGC...ACCTAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CAA 90 bp | GTCTATAAAACAGGGATGGTCCTTTCTCACCACCCACCCTGCCCGTTGGTCCTACGCCGCCGGTCAACCTaGGCACGGTACTTATTGCTG | + |
Preference number: 5 (lower is better) Translates to: VYKTGMVLSHHPPCPLVLRRRST*ARYLLL Trigger: CAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCG...TAGGACCAACGGGCAGGGTGGGTGGTGAGAAAGGACCATCCCTGTTTTATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CAA 90 bp | GCACACACATCCATTATAGGCAGCTTTGCCTACCCTATGCCATGGAGGCCAGGTTTGGCACGGTACTTATaGCTGTCGGTGGCTAGGGTA | + |
Preference number: 5 (lower is better) Translates to: AHTSIIGSFAYPMPWRPGLARYL*LSVARV Trigger: TACCCTAGCCACCGACAGCAATAAGTACCGTGCCAA...ACCTGGCCTCCATGGCATAGGGTAGGCAAAGCTGCCTATAATGGATGTGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CAA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTCTGCCCGCTTGTCCCTaGCACGACTACGGGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSLPACP*HDYGPW Trigger: CCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAG...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS TCA 90 bp | CATTGTTCTGGAGGTGATAGTGTATGCCAGAGCCCAACACATCTTTaGAGGCTGTGTAGATGCGGTGGCGAGCCCAGCTGTCTATGTAGA | + |
Preference number: 5 (lower is better) Translates to: HCSGGDSVCQSPTHL*RLCRCGGEPSCLCR Trigger: TCTACATAGACAGCTGGGCTCGCCACCGCATCTACACAGCCTTCAAAGATGTGTTGGGCTCTGGCATACACTATCACCTCCAGAACAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS TCA 90 bp | CAATTAGCTGGAGGTGATAGTGTATGCCAGAGCCCAACACATCTTTaGAGGCTGTGTAGATGCGGTGGCGAGCCCAGCTGTCTATGTAGA | + |
Preference number: 5 (lower is better) Translates to: QLAGGDSVCQSPTHL*RLCRCGGEPSCLCR Trigger: TCTACATAGACAGCTGGGCTCGCCACCGCATCTACACAGCCTTCAAAGATGTGTTGGGCTCTGGCATACACTATCACCTCCAGCTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193140.2 |
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CDS-3UTR CAA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGCACGACTACGGGCCTaGGTCCGGGCTTTGAAGGCT | + |
Preference number: 5 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDARLRA*VRALKA Trigger: AGCCTTCAAAGCCCGGACCAAGGCCCGTAGTCGTGC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTACTGCCCGCTTGTCCCTaGCACGACTACGGGCCTTGG | + |
Preference number: 5 (lower is better) Translates to: KNKVTITGRDQFLHCLLLLPACP*HDYGPW Trigger: CCAAGGCCCGTAGTCGTGCAAGGGACAAGCGGGCAG...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTCGCCGCCGGTCAACCTaGGCACGGTACTTATTGCTG | + |
Preference number: 5 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSRRRST*ARYLLL Trigger: CAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCG...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | GAAGAGGCCACAGCCACAGAGCTGAGTGCACATACAAAGGGCTTGAGTCTAAGTTTGAAGGCTGCAGCATaGTACAGGTGCTTTTCAAAG | + |
Preference number: 5 (lower is better) Translates to: EEATATELSAHTKGLSLSLKAAA*YRCFSK Trigger: CTTTGAAAAGCACCTGTACAATGCTGCAGCCTTCAA...ACTTAGACTCAAGCCCTTTGTATGTGCACTCAGCTCTGTGGCTGTGGCCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS-3UTR CAA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGCCTTGGTCCGGGCTTaGAAGGCTGCAGCATTGTAC | + |
Preference number: 5 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSALVRA*KAAALY Trigger: GTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGC...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATGCCTTGGTCCGGGCTTaGAAGGCTGCAGCATTGTAC | + |
Preference number: 5 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDALVRA*KAAALY Trigger: GTACAATGCTGCAGCCTTCAAAGCCCGGACCAAGGC...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTTTGGCACGGTACTTATaGCTGTCGGTGGCTAGGGTA | + |
Preference number: 5 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSLARYL*LSVARV Trigger: TACCCTAGCCACCGACAGCAATAAGTACCGTGCCAA...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | CTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTGATTCAAAGCGTGAAATCTaGCAGGCCTTCAGGGCAGCA | + |
Preference number: 5 (lower is better) Translates to: LLLKIWYGMGSLLVGQSDSKREI*QAFRAA Trigger: TGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTGA...ATCAGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | AAAAATAAAGTGACAATCACTGGCAGGGACCAGTTCTTGCACTGTCTTCTGTTATCAAAGCGTGAAATCTaGCAGGCCTTCAGGGCAGCA | + |
Preference number: 5 (lower is better) Translates to: KNKVTITGRDQFLHCLLLSKREI*QAFRAA Trigger: TGCTGCCCTGAAGGCCTGCAAGATTTCACGCTTTGA...TAACAGAAGACAGTGCAAGAACTGGTCCCTGCCAGTGATTGTCACTTTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS-3UTR CAA 90 bp | TGTCTTCTGTTAAAAATATGGTATGGTATGGGTAGCCTTCTCGTTGGCCAGTCTTTGAAGGCTGCAGCATaGTACAGGTGCTTTTCAAAG | + |
Preference number: 5 (lower is better) Translates to: CLLLKIWYGMGSLLVGQSLKAAA*YRCFSK Trigger: CTTTGAAAAGCACCTGTACAATGCTGCAGCCTTCAA...AGACTGGCCAACGAGAAGGCTACCCATACCATACCATATTTTTAACAGAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS TCA 72 bp | GCCTGGGTACTGCTCCTGGCACCTCCTCCACGGCGCTaGCCGCCCTTGCGGAGCGCATTGCCCTTCCGAGCA | + |
Preference number: 6 (lower is better) Translates to: AWVLLLAPPPRR*PPLRSALPFRA Trigger: TGCTCGGAAGGGCAATGCGCTCCGCAAGGGCGGTCAGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS TCA 72 bp | CCGCTTCGCCACCCAGGCAGTCCTCTGTGGTGGCGCTaGGAAGGCTGGGACAGTCACTGGTGGTGCTCCGGG | + |
Preference number: 6 (lower is better) Translates to: PLRHPGSPLWWR*EGWDSHWWCSG Trigger: CCCGGAGCACCACCAGTGACTGTCCCAGCCTTCTCAGCGCCACCACAGAGGACTGCCTGGGTGGCGAAGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS CCA 72 bp | CCTCACTGGAGCCAGAGTCAGCCTGGGTACTGCTCCTaGCACCTCCTCCACGGCGCTGACCGCCCTTGCGGA | + |
Preference number: 6 (lower is better) Translates to: PHWSQSQPGYCS*HLLHGADRPCG Trigger: TCCGCAAGGGCGGTCAGCGCCGTGGAGGAGGTGCCAGGAGCAGTACCCAGGCTGACTCTGGCTCCAGTGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS CCA 72 bp | AATGCCCAGGCCTGCAGGGCAGCACAGAGAAGGCCATaGAGGCTGGCGGGAACCAGAGACGCCGCAGAGCCA | + |
Preference number: 6 (lower is better) Translates to: NAQACRAAQRRP*RLAGTRDAAEP Trigger: TGGCTCTGCGGCGTCTCTGGTTCCCGCCAGCCTCCATGGCCTTCTCTGTGCTGCCCTGCAGGCCTGGGCATT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 72 bp | GGCTGGGACAGTCACTGGTGGTGCTCCGGGCCTCACTaGCCGCTTCATCCTCACTGGAGCCAGAGTCAGCCT | + |
Preference number: 6 (lower is better) Translates to: GWDSHWWCSGPH*PLHPHWSQSQP Trigger: AGGCTGACTCTGGCTCCAGTGAGGATGAAGCGGCCAGTGAGGCCCGGAGCACCACCAGTGACTGTCCCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS GCA 72 bp | CGGAACAGCTCCTCGCCCTTGGGTCCAGGGCCCAACTaGACACAGAGAATGCCTAGCACAGCAGCAGCCAGA | + |
Preference number: 6 (lower is better) Translates to: RNSSSPLGPGPN*TQRMPSTAAAR Trigger: TCTGGCTGCTGCTGTGCTAGGCATTCTCTGTGTGCAGTTGGGCCCTGGACCCAAGGGCGAGGAGCTGTTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CAA 90 bp | ACCGAGATGAGCAAGGGCTGCAGGCTACGGAACAGCTCCTCGCCCTaGGGTCCAGGGCCCAACTGCACACAGAGAATGCCTAGCACAGCA | + |
Preference number: 6 (lower is better) Translates to: TEMSKGCRLRNSSSP*GPGPNCTQRMPSTA Trigger: TGCTGTGCTAGGCATTCTCTGTGTGCAGTTGGGCCCTGGACCCAAGGGCGAGGAGCTGTTCCGTAGCCTGCAGCCCTTGCTCATCTCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS GCA 72 bp | GCTGTACTGTCACTGAGCACCGAGATGAGCAAGGGCTaGAGGCTACGGAACAGCTCCTCGCCCTTGGGTCCA | + |
Preference number: 6 (lower is better) Translates to: AVLSLSTEMSKG*RLRNSSSPLGP Trigger: TGGACCCAAGGGCGAGGAGCTGTTCCGTAGCCTGCAGCCCTTGCTCATCTCGGTGCTCAGTGACAGTACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CAA 90 bp | TGCAGCACAGCTCGGAAAATGGAGCGCTGGCGCCGCCGGTCAACCTaGGCACGGTACTTATTGCTGTCGGTGGCTAGGGTACGCAGAGAT | + |
Preference number: 6 (lower is better) Translates to: CSTARKMERWRRRST*ARYLLLSVARVRRD Trigger: ATCTCTGCGTACCCTAGCCACCGACAGCAATAAGTACCGTGCCAAGGTTGACCGGCGGCGCCAGCGCTCCATTTTCCGAGCTGTGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195746.2 |
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CDS CCA 72 bp | CCAGGCGCAGGCTCTCCAGGGCTCCTTGACGGGTCTTaGCACTCTTGTCAGTCAGGCAGTCCACATAACCTT | + |
Preference number: 6 (lower is better) Translates to: PGAGSPGLLDGS*HSCQSGSPHNL Trigger: AAGGTTATGTGGACTGCCTGACTGACAAGAGTGCCAAGACCCGTCAAGGAGCCCTGGAGAGCCTGCGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010192.11 ENSMUST00000195725.6 |
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CDS CCA 72 bp | AGCAGGCCAAGCAAGAGACCAGGTCCTGGACGTCGGTaGCAGCCACATAGCAACCCAAGCCAAGAGCAGAAG | + |
Preference number: 6 (lower is better) Translates to: SRPSKRPGPGRR*QPHSNPSQEQK Trigger: CTTCTGCTCTTGGCTTGGGTTGCTATGTGGCTGCCACCGACGTCCAGGACCTGGTCTCTTGCTTGGCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS CCA 72 bp | AGCCGGGGCAGCTGCCTGTCAAGGATATGGCTGATGTaGGTACCAGGACAGATGGTGAGCAGCAATGCCCAG | + |
Preference number: 6 (lower is better) Translates to: SRGSCLSRIWLM*VPGQMVSSNAQ Trigger: CTGGGCATTGCTGCTCACCATCTGTCCTGGTACCCACATCAGCCATATCCTTGACAGGCAGCTGCCCCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS GCA 72 bp | AAGAGCAGAAGCACAATGGAGCCGGGCAGTGGGGCTTaGTGTACTGTCACTGAGCACCGAGATGAGCAAGGG | + |
Preference number: 6 (lower is better) Translates to: KSRSTMEPGSGA*CTVTEHRDEQG Trigger: CCCTTGCTCATCTCGGTGCTCAGTGACAGTACAGCAAGCCCCACTGCCCGGCTCCATTGTGCTTCTGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010192.11 |
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CDS TCA 72 bp | GGAGGTGATAGTGTATGCCAGAGCCCAACACATCTTTaGAGGCTGTGTAGATGCGGTGGCGAGCCCAGCTGT | + |
Preference number: 6 (lower is better) Translates to: GGDSVCQSPTHL*RLCRCGGEPSC Trigger: ACAGCTGGGCTCGCCACCGCATCTACACAGCCTTCAAAGATGTGTTGGGCTCTGGCATACACTATCACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010192.11 ENSMUST00000193140.2 ENSMUST00000195746.2 |