Pregenerated sensors for IFNLR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062157Ensembl transcript IDs: ENSMUST00000074408.7
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCGTGGTGCAGCTCAGCTGAGTCTCAGGAAGGACACTGGCCTTaGTGGGACATTTCTAGGGGCTTCTCCCGTGCTCTGACCGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: PPWCSSAESQEGHWP*WDISRGFSRALTAL Trigger: GAGGGCGGTCAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAGGCCAGTGTCCTTCCTGAGACTCAGCTGAGCTGCACCACGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | CCGTGGTGCAGCTCAGCTGAGTCTCAGGAAGGACACTGGCCTTGCTaGGACATTTCTAGGGGCTTCTCCCGTGCTCTGACCGCCCTCACG | + |
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Preference number: 1 (lower is better) Translates to: PWCSSAESQEGHWPC*DISRGFSRALTALT Trigger: CGTGAGGGCGGTCAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAGGCCAGTGTCCTTCCTGAGACTCAGCTGAGCTGCACCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 90 bp | GACACTGGCCTTGCTGGGACATTTCTAGGGGCTTCTCCCGTGCTCTaGCCGCCCTCACGCATGTGCATTTGTTCTGCTTCTGGGCTCAGT | + |
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Preference number: 1 (lower is better) Translates to: DTGLAGTFLGASPVL*PPSRMCICSASGLS Trigger: ACTGAGCCCAGAAGCAGAACAAATGCACATGCGTGAGGGCGGTCAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAGGCCAGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | GACCTAGAGGGCAGACAGGTTGGAAGGTCGATGTCTTATCACTCTTaGCTTAGGAGTTGCTGGGGAGAGATGCCTGGGGTCTCCCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DLEGRQVGRSMSYHS*LRSCWGEMPGVSQE Trigger: CTCCTGGGAGACCCCAGGCATCTCTCCCCAGCAACTCCTAAGCCAAGAGTGATAAGACATCGACCTTCCAACCTGTCTGCCCTCTAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 90 bp | CCGTCATCCCAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTaGTCACAGCTCTGTCCCGCTCACAGGTCACCTATAGCTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: PSSQGQWADWNSTSL*SQLCPAHRSPIAGG Trigger: CCCACCAGCTATAGGTGACCTGTGAGCGGGACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTGGGATGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | CAGGTTGGAAGGTCGATGTCTTATCACTCTTGGCTTAGGAGTTGCTaGGGAGAGATGCCTGGGGTCTCCCAGGAGTCTGGATTGATGGAG | + |
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Preference number: 1 (lower is better) Translates to: QVGRSMSYHSWLRSC*GEMPGVSQESGLME Trigger: CTCCATCAATCCAGACTCCTGGGAGACCCCAGGCATCTCTCCCCAGCAACTCCTAAGCCAAGAGTGATAAGACATCGACCTTCCAACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | TGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTaGTGCAGCTCAGCTGAGTCTCAGGAAGGACACTGGCCTTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: CHHHHFQGFLTEHPP*CSSAESQEGHWPCW Trigger: CCAGCAAGGCCAGTGTCCTTCCTGAGACTCAGCTGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 90 bp | TTATGCCAGCCTCAGAGCCACACAGCTCCGAGAGTAAAGGGGCTGTaGGCTCTTTCCTGCTTCATGGTCTGTTTAGATCCTCAGCCACAA | + |
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Preference number: 1 (lower is better) Translates to: LCQPQSHTAPRVKGL*ALSCFMVCLDPQPQ Trigger: TTGTGGCTGAGGATCTAAACAGACCATGAAGCAGGAAAGAGCTCACAGCCCCTTTACTCTCGGAGCTGTGTGGCTCTGAGGCTGGCATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | GTGCTTGCAAAGACCTCCTGTCAGATTGGTGACTCTGGGGACTCTTaGGGACACACAAATGAAGTCACTAGGGCAGCCTTGCTAGTTGAC | + |
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Preference number: 1 (lower is better) Translates to: VLAKTSCQIGDSGDS*GHTNEVTRAALLVD Trigger: GTCAACTAGCAAGGCTGCCCTAGTGACTTCATTTGTGTGTCCCCAAGAGTCCCCAGAGTCACCAATCTGACAGGAGGTCTTTGCAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | CGCCCTCACGCATGTGCATTTGTTCTGCTTCTGGGCTCAGTGATGTaGTCAAACATCATTGTAGGGAAACCCCAGAGAGGTAGGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RPHACAFVLLLGSVM*SNIIVGKPQRGRCV Trigger: CACACACCTACCTCTCTGGGGTTTCCCTACAATGATGTTTGACCACATCACTGAGCCCAGAAGCAGAACAAATGCACATGCGTGAGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | ATGTCGACCCTGGAAGGTGTACTATGCTTGAGAACGAAGCAAAGTTaGTTGGGCTGTGGTTTCCAGGAGCCCCTGAATAGAAGGTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: MSTLEGVLCLRTKQS*LGCGFQEPLNRRWQ Trigger: TTGCCACCTTCTATTCAGGGGCTCCTGGAAACCACAGCCCAACCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTCCAGGGTCGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR GCA 90 bp | ACAGTAAGGACTACCGGAGAGAGCAAGCTTGAAAGGCGAGGCCAATaGTGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCT | + |
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Preference number: 1 (lower is better) Translates to: TVRTTGESKLERRGQ*CHHHHFQGFLTEHP Trigger: AGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGGCCTCGCCTTTCAAGCTTGCTCTCTCCGGTAGTCCTTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | TCTCTGATCACAGCTCTGTCCCGCTCACAGGTCACCTATAGCTGGTaGGTCATTGGAAATGGTGACATCTTACAACTCAATCCCAACGAC | + |
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Preference number: 1 (lower is better) Translates to: SLITALSRSQVTYSW*VIGNGDILQLNPND Trigger: GTCGTTGGGATTGAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATAGGTGACCTGTGAGCGGGACAGAGCTGTGATCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 90 bp | GTGTCCACAGTCACCTGGCTTCACCTGTTTCATTTTATCACAGGATaGTTTTTCCATCAGGCCCGTCATCCCAGGGACAATGGGCAGATT | + |
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Preference number: 1 (lower is better) Translates to: VSTVTWLHLFHFITG*FFHQARHPRDNGQI Trigger: AATCTGCCCATTGTCCCTGGGATGACGGGCCTGATGGAAAAATCATCCTGTGATAAAATGAAACAGGTGAAGCCAGGTGACTGTGGACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 90 bp | TGCGCAATGCTGTGTGTGACTTATGGACTAGGGCGTATCTACCCTTaGTGTCCACAGTCACCTGGCTTCACCTGTTTCATTTTATCACAG | + |
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Preference number: 1 (lower is better) Translates to: CAMLCVTYGLGRIYP*CPQSPGFTCFILSQ Trigger: CTGTGATAAAATGAAACAGGTGAAGCCAGGTGACTGTGGACACCAAGGGTAGATACGCCCTAGTCCATAAGTCACACACAGCATTGCGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 90 bp | TTGGGAAACACTGTAAACAGTAAGGACTACCGGAGAGAGCAAGCTTaGAAGGCGAGGCCAATGCTGTCATCACCATCATTTCCAAGGATT | + |
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Preference number: 1 (lower is better) Translates to: LGNTVNSKDYRREQA*KARPMLSSPSFPRI Trigger: AATCCTTGGAAATGATGGTGATGACAGCATTGGCCTCGCCTTTCAAGCTTGCTCTCTCCGGTAGTCCTTACTGTTTACAGTGTTTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR GCA 90 bp | TCATTGGAAATGGTGACATCTTACAACTCAATCCCAACGACAAAGTaGCATAAAGATCCATTACGAATGGCCAGGACCTTGGCTACCACT | + |
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Preference number: 1 (lower is better) Translates to: SLEMVTSYNSIPTTK*HKDPLRMARTLATT Trigger: AGTGGTAGCCAAGGTCCTGGCCATTCGTAATGGATCTTTATGGCACTTTGTCGTTGGGATTGAGTTGTAAGATGTCACCATTTCCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | AGTAAAGGGGCTGTGAGCTCTTTCCTGCTTCATGGTCTGTTTAGATCCTCAGCCGTTGCTGGGGAGAGATaGCTGGGGTCTCCCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SKGAVSSFLLHGLFRSSAVAGER*LGSPRS Trigger: ACTCCTGGGAGACCCCAGGCATCTCTCCCCAGCAAC...GGCTGAGGATCTAAACAGACCATGAAGCAGGAAAGAGCTCACAGCCCCTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCTCCCGTGCTCTGACCGCCCTCACGCATGTGCATTTGTTCTGCTTCTGAGCAGAGTAGTGATTTaGACCGAGGTCTGTTTTGCG | + |
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Preference number: 2 (lower is better) Translates to: GLLPCSDRPHACAFVLLLSRVVI*TEVCFA Trigger: CGCAAAACAGACCTCGGTCCAAATCACTACTCTGCT...CAGAAGCAGAACAAATGCACATGCGTGAGGGCGGTCAGAGCACGGGAGAAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | AACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCTGGGGAGAGATGCCTaGGGTCTCCCAGGAGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NPDTMPFKKDTRPGVQFLLGRDA*GLPGVW Trigger: CCAGACTCCTGGGAGACCCCAGGCATCTCTCCCCAG...CAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCATCTTGGCTTAGGAGTTaGTGGGGAGAGATGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSSWLRS*WGEMPG Trigger: CCCAGGCATCTCTCCCCAGCAACTCCTAAGCCAAGA...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCAACACCAGGCCAGGAGTaGAGTTTCTGCCCTGAACCA | + |
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Preference number: 2 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSTPGQE*SFCPEP Trigger: TGGTTCAGGGCAGAAACTGCACTCCTGGCCTGGTGT...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACTGCTGCAGAAGAGGTTAAGAGTCGCTTaGTCAGTGACTATCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: WWPCVTCYLPIPTGLLQKRLRVA*SVTIRN Trigger: GTTTCTGATAGTCACTGAGCAAGCGACTCTTAACCT...CTTCTGCAGCAGTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCAGAATGGCCAGGACCTTaGCTACCACTCAAAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSEWPGP*LPLKGT Trigger: TGTCCCTTTGAGTGGTAGCCAAGGTCCTGGCCATTC...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CAA 90 bp | TCACAGCTCTGTCCCGCTCACAGGTCACCTATAGCTGGTGGGTCATaGGAAATGGTGACATCTTACAACTCAATCCCAACGACAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SQLCPAHRSPIAGGS*EMVTSYNSIPTTKC Trigger: GCACTTTGTCGTTGGGATTGAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATAGGTGACCTGTGAGCGGGACAGAGCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR TCA 90 bp | CATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCCCTGAACCAACCAATGAGTCGCTTGCTCAGTaGCTATCAGAAACAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: HSKRTPGQECSFCPEPTNESLAQ*LSETAE Trigger: CTCTGCTGTTTCTGATAGTCACTGAGCAAGCGACTC...ATTGGTTGGTTCAGGGCAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCACAGGTCACCTATAGCTaGTGGGTCATTGGAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSQVTYS*WVIGNG Trigger: ACCATTTCCAATGACCCACCAGCTATAGGTGACCTG...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCAAGAACGAAGCAAAGTTaGTTGGGCTGTGGTTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSRTKQS*LGCGFQ Trigger: CTGGAAACCACAGCCCAACCAACTTTGCTTCGTTCT...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCTGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGTCTCAGGAAGGACACTaGCCTTGCTGGGACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: PMLSSPSFPRIPDRASSVSQEGH*PCWDIS Trigger: AGAAATGTCCCAGCAAGGCCAGTGTCCTTCCTGAGA...CACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR TCA 90 bp | CATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGCTCCGGGTCATTGGAAATGGTaGCATCTTACAACTCAATCC | + |
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Preference number: 2 (lower is better) Translates to: HEFCKAMALCQPQSHTAPGHWKW*HLTTQS Trigger: GGATTGAGTTGTAAGATGTCACCATTTCCAATGACC...CGGAGCTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR TCA 90 bp | GGTCCATTGACGTTTTCACAGTGGTTGCCTGAGACCATTGGAAAACACATTGTGCCTAGTCAGTACATGTaGCATTGGTGGCCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GPLTFSQWLPETIGKHIVPSQYM*HWWPCV Trigger: GACACAGGGCCACCAATGTCACATGTACTGACTAGG...CACAATGTGTTTTCCAATGGTCTCAGGCAACCACTGTGAAAACGTCAATGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | GTGATGTGGTCAAACATCATTGTAGGGAAACCCCAGAGAGGTAGGTGTGTGTGTGACCGAGGTCTGTTTTaGGCAATGCTGTGTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: VMWSNIIVGKPQRGRCVCDRGLF*AMLCVT Trigger: AGTCACACACAGCATTGCGCAAAACAGACCTCGGTC...ACACACACACCTACCTCTCTGGGGTTTCCCTACAATGATGTTTGACCACATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | CATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCCCTGAACCAACCAATTCATCCCAGGGACAATaGGCAGATTGGAACTCAACT | + |
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Preference number: 2 (lower is better) Translates to: HSKRTPGQECSFCPEPTNSSQGQ*ADWNST Trigger: AGTTGAGTTCCAATCTGCCCATTGTCCCTGGGATGA...ATTGGTTGGTTCAGGGCAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CAA 90 bp | TTGCGCAATGCTGTGTGTGACTTATGGACTAGGGCGTATCTACCCTaGGTGTCCACAGTCACCTGGCTTCACCTGTTTCATTTTATCACA | + |
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Preference number: 2 (lower is better) Translates to: LRNAVCDLWTRAYLP*VSTVTWLHLFHFIT Trigger: TGTGATAAAATGAAACAGGTGAAGCCAGGTGACTGTGGACACCAAGGGTAGATACGCCCTAGTCCATAAGTCACACACAGCATTGCGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACGTTTCTCAGCCTGTGTaGGTCATGACCCCTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: EVTRAALLVDIQVCLKQYVSQPV*VMTPLG Trigger: CCCCAAAGGGGTCATGACCCACACAGGCTGAGAAAC...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTGATCACAGCTCTGTCATCCCAACGACAAAGTaGCATAAAGATCCATTACGA | + |
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Preference number: 2 (lower is better) Translates to: PRDNGQIGTQLVSDHSSVIPTTK*HKDPLR Trigger: TCGTAATGGATCTTTATGGCACTTTGTCGTTGGGAT...GACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR GCA 72 bp | TGCAGCTCAGCTGAGTCTCAGGAAGGACACTGGCCTTaGTGGGACATTTCTAGGGGCTTCTCCCGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CSSAESQEGHWP*WDISRGFSRAL Trigger: CAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAGGCCAGTGTCCTTCCTGAGACTCAGCTGAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 72 bp | AGCTCAGCTGAGTCTCAGGAAGGACACTGGCCTTGCTaGGACATTTCTAGGGGCTTCTCCCGTGCTCTGACC | + |
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Preference number: 3 (lower is better) Translates to: SSAESQEGHWPC*DISRGFSRALT Trigger: GGTCAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAGGCCAGTGTCCTTCCTGAGACTCAGCTGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 72 bp | CTTGCTGGGACATTTCTAGGGGCTTCTCCCGTGCTCTaGCCGCCCTCACGCATGTGCATTTGTTCTGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LAGTFLGASPVL*PPSRMCICSAS Trigger: AGAAGCAGAACAAATGCACATGCGTGAGGGCGGTCAGAGCACGGGAGAAGCCCCTAGAAATGTCCCAGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 72 bp | AGGTCGATGTCTTATCACTCTTGGCTTAGGAGTTGCTaGGGAGAGATGCCTGGGGTCTCCCAGGAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSMSYHSWLRSC*GEMPGVSQESG Trigger: TCCAGACTCCTGGGAGACCCCAGGCATCTCTCCCCAGCAACTCCTAAGCCAAGAGTGATAAGACATCGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 72 bp | GGCAGACAGGTTGGAAGGTCGATGTCTTATCACTCTTaGCTTAGGAGTTGCTGGGGAGAGATGCCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: GRQVGRSMSYHS*LRSCWGEMPGV Trigger: GACCCCAGGCATCTCTCCCCAGCAACTCCTAAGCCAAGAGTGATAAGACATCGACCTTCCAACCTGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 72 bp | CATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTaGTGCAGCTCAGCTGAGTCTCAGGAAGGACACTGG | + |
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Preference number: 3 (lower is better) Translates to: HHFQGFLTEHPP*CSSAESQEGHW Trigger: CCAGTGTCCTTCCTGAGACTCAGCTGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CAA 90 bp | CCAATGCTGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGAGGGCGTATCTACCCTaGGTGTCCACAGTCACCTGG | + |
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Preference number: 3 (lower is better) Translates to: PMLSSPSFPRIPDRASSVRAYLP*VSTVTW Trigger: CCAGGTGACTGTGGACACCAAGGGTAGATACGCCCT...CACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CAA 90 bp | GGGCTTCTCCCGTGCTCTGACCGCCCTCACGCATGTGCATTTGTTCTGCTTCTGGAAGGTGTACTATGCTaGAGAACGAAGCAAAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: GLLPCSDRPHACAFVLLLEGVLC*RTKQSW Trigger: CCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTC...CAGAAGCAGAACAAATGCACATGCGTGAGGGCGGTCAGAGCACGGGAGAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 72 bp | CCTCAGAGCCACACAGCTCCGAGAGTAAAGGGGCTGTaGGCTCTTTCCTGCTTCATGGTCTGTTTAGATCCT | + |
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Preference number: 3 (lower is better) Translates to: PQSHTAPRVKGL*ALSCFMVCLDP Trigger: AGGATCTAAACAGACCATGAAGCAGGAAAGAGCTCACAGCCCCTTTACTCTCGGAGCTGTGTGGCTCTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR TCA 72 bp | GCCAATGCTGTCATCACCATCATTTCCAAGGATTCCTaGCAGAGCATCCTCCGTGGTGCAGCTCAGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: ANAVITIISKDS*QSILRGAAQLS Trigger: ACTCAGCTGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR CCA 72 bp | AAGACCTCCTGTCAGATTGGTGACTCTGGGGACTCTTaGGGACACACAAATGAAGTCACTAGGGCAGCCTTG | + |
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Preference number: 3 (lower is better) Translates to: KTSCQIGDSGDS*GHTNEVTRAAL Trigger: CAAGGCTGCCCTAGTGACTTCATTTGTGTGTCCCCAAGAGTCCCCAGAGTCACCAATCTGACAGGAGGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| 3UTR-3UTR CAA 90 bp | CTTCACATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGACGAAGCAAAGTTGGTaGGGCTGTGGTTTCCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHMSSVRLWLYASLRATQTKQSW*GCGFQE Trigger: CTCCTGGAAACCACAGCCCAACCAACTTTGCTTCGT...CTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAATGCTGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGCCCTTTGGGGGTCCATaGACGTTTTCACAGTGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PMLSSPSFPRIPDRASSVPFGGP*TFSQWL Trigger: CAACCACTGTGAAAACGTCAATGGACCCCCAAAGGG...CACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR TCA 72 bp | CAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTaGTCACAGCTCTGTCCCGCTCACAGGTCACCTATA | + |
|
Preference number: 3 (lower is better) Translates to: QGQWADWNSTSL*SQLCPAHRSPI Trigger: TATAGGTGACCTGTGAGCGGGACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR GCA 72 bp | GGGTCTTCACATGAGTTCTGTAAGGCTATGGCTTTATaGCAGCCTCAGAGCCACACAGCTCCGAGAGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSSHEFCKAMAL*QPQSHTAPRVK Trigger: CTTTACTCTCGGAGCTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATGTGAAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTAAACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTCCCAGGAGTCTGGATaGATGGAGGGTTCTAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NLNPDTMPFKKDTRPGVQSQESG*MEGSSA Trigger: GGCACTAGAACCCTCCATCAATCCAGACTCCTGGGA...CTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTTTAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR TCA 72 bp | ACCAACCAATGTCGACCCTGGAAGGTGTACTATGCTTaGGAACGAAGCAAAGTTGGTTGGGCTGTGGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: TNQCRPWKVYYA*ERSKVGWAVVS Trigger: GGAAACCACAGCCCAACCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTCCAGGGTCGACATTGGTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR GCA 72 bp | ACTACCGGAGAGAGCAAGCTTGAAAGGCGAGGCCAATaGTGTCATCACCATCATTTCCAAGGATTCCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: TTGESKLERRGQ*CHHHHFQGFLT Trigger: TGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGGCCTCGCCTTTCAAGCTTGCTCTCTCCGGTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CCA 72 bp | ATCACAGCTCTGTCCCGCTCACAGGTCACCTATAGCTaGTGGGTCATTGGAAATGGTGACATCTTACAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ITALSRSQVTYS*WVIGNGDILQL Trigger: GAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATAGGTGACCTGTGAGCGGGACAGAGCTGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CCA 72 bp | CTGTGTGTGACTTATGGACTAGGGCGTATCTACCCTTaGTGTCCACAGTCACCTGGCTTCACCTGTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LCVTYGLGRIYP*CPQSPGFTCFI Trigger: AATGAAACAGGTGAAGCCAGGTGACTGTGGACACCAAGGGTAGATACGCCCTAGTCCATAAGTCACACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CCA 72 bp | CTGGAAGGTGTACTATGCTTGAGAACGAAGCAAAGTTaGTTGGGCTGTGGTTTCCAGGAGCCCCTGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEGVLCLRTKQS*LGCGFQEPLNR Trigger: TCTATTCAGGGGCTCCTGGAAACCACAGCCCAACCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CCA 72 bp | ACAGCTCTGTCCCGCTCACAGGTCACCTATAGCTGGTaGGTCATTGGAAATGGTGACATCTTACAACTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TALSRSQVTYSW*VIGNGDILQLN Trigger: ATTGAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATAGGTGACCTGTGAGCGGGACAGAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CCA 72 bp | GCATGTGCATTTGTTCTGCTTCTGGGCTCAGTGATGTaGTCAAACATCATTGTAGGGAAACCCCAGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ACAFVLLLGSVM*SNIIVGKPQRG Trigger: ACCTCTCTGGGGTTTCCCTACAATGATGTTTGACCACATCACTGAGCCCAGAAGCAGAACAAATGCACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR GCA 72 bp | GAAGGGGAAGCTGAGGTTGAGAGGTTAAGAGTCGCTTaGTCAGTGACTATCAGAAACAGCAGAGTAGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: EGEAEVERLRVA*SVTIRNSRVVI Trigger: AATCACTACTCTGCTGTTTCTGATAGTCACTGAGCAAGCGACTCTTAACCTCTCAACCTCAGCTTCCCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTAAACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGATAGCTGGTGGGTCATaGGAAATGGTGACATCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: NLNPDTMPFKKDTRPGVQIAGGS*EMVTSY Trigger: GTAAGATGTCACCATTTCCAATGACCCACCAGCTAT...CTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTTTAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACGAGAACGAAGCAAAGTaGGTTGGGCTGTGGTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: EVTRAALLVDIQVCLKQYENEAK*VGLWFP Trigger: TGGAAACCACAGCCCAACCAACTTTGCTTCGTTCTC...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | ACATTGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACTGCTGCATCTTCTCCATCTGGGTaGGCACCAGGGTGGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLVALCHLLPPHTHRTAASSPSG*APGWAG Trigger: CCCCGCCCACCCTGGTGCTCACCCAGATGGAGAAGA...TGCAGCAGTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCAATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | AACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCCAGCATCCGGCCCCTaGCCTCCGTCCTCTGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: NPDTMPFKKDTRPGVQFLPASGP*PPSSAR Trigger: GCGTGCAGAGGACGGAGGTCAGGGGCCGGATGCTGG...CAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR GCA 90 bp | TGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACTGCTGCAGAAGCGTCGGCTAGCACCTTaGTGGAGAGGAATCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: WWPCVTCYLPIPTGLLQKRRLAP*WRGICT Trigger: AGTGCAGATTCCTCTCCAGCAAGGTGCTAGCCGACG...CTTCTGCAGCAGTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | ACATGTGACATTGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACGGACCAGCTCCTGTCTaGAGAGTCCCATGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCDIGGPVSPVTSPYPQDGPAPV*RVPCRG Trigger: TCCTCTGCATGGGACTCTTCAGACAGGAGCTGGTCC...GTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCAATGTCACATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | AACTTAAACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGCCGGGACTCCACCCGTaGGGACCTGCCGTGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLNPDTMPFKKDTRPGVQPGLHP*GPAVCG Trigger: TCCGCACACGGCAGGTCCCCACGGGTGGAGTCCCGG...CTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTTTAAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR GCA 90 bp | ACATTGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACTGCTGCAGAGCCTCTAGGAAGATaGAGCTGGGCTCAGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TLVALCHLLPPHTHRTAAEPLGR*SWAQRT Trigger: AGTTCTCTGAGCCCAGCTGCATCTTCCTAGAGGCTC...TGCAGCAGTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | CATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGCTCCGGAAATAGGTCACATTTaGGGGGCTCCCAAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HEFCKAMALCQPQSHTAPEIGHI*GAPKPR Trigger: CCGGGGCTTGGGAGCCCCCCAAATGTGACCTATTTC...CGGAGCTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | ACATTGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACTGCTGCAAGAAAATTCCAGGCATaGGAGAGCCTCCTGGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVALCHLLPPHTHRTAARKFQA*ESLLEP Trigger: TGGCTCCAGGAGGCTCTCCCATGCCTGGAATTTTCT...TGCAGCAGTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCAATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR GCA 90 bp | CATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGTGCAGCTCACTGACCTCCGTCCTCTaGACGCTTGAAGTGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HHHHFQGFLTEHPPWCSSLTSVL*TLEVPQ Trigger: TTGGGGCACTTCAAGCGTGCAGAGGACGGAGGTCAG...TGAGCTGCACCACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTGATCACAGCTCTGTCAGGATCTTCTCCATCTaGGTGAGCACCAGGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRDNGQIGTQLVSDHSSVRIFSI*VSTRVG Trigger: GCCCACCCTGGTGCTCACCCAGATGGAGAAGATCCT...GACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | ACATGTGACATTGGTGGCCCTGTGTCACCTGTTACCTCCCCATACCCACAGGACAGAACTCAGGTCCACTaGGCTGAAAGGTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCDIGGPVSPVTSPYPQDRTQVH*AERLPL Trigger: CAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCT...GTCCTGTGGGTATGGGGAGGTAACAGGTGACACAGGGCCACCAATGTCACATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCATGGGAGAGCCTCCTaGAGCCAATCCCCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPDTMPFKKDTRPGVQFLHGRAS*SQSPQG Trigger: GCCCTGTGGGGATTGGCTCCAGGAGGCTCTCCCATG...CAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CAA 72 bp | GTGTCCCAGAGGTGCTTGCAAAGACCTCCTGTCAGATaGGTGACTCTGGGGACTCTTGGGGACACACAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VSQRCLQRPPVR*VTLGTLGDTQM Trigger: CATTTGTGTGTCCCCAAGAGTCCCCAGAGTCACCAATCTGACAGGAGGTCTTTGCAAGCACCTCTGGGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGGGGCTGTGAGCTCTTTCCTGCTTCATGGTCTGTTTAGATCCTCAGCCGCTGCCCTTAGGTTCTaGTTCCCAGTCTTCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKGAVSSFLLHGLFRSSAAALRF*FPVFLL Trigger: GAGGAGGAAGACTGGGAATCAGAACCTAAGGGCAGC...GGCTGAGGATCTAAACAGACCATGAAGCAGGAAAGAGCTCACAGCCCCTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CCA 90 bp | AACTTAAACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGCGACGGCATGCAAGGTaGCAGCTGGTAGGTAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLNPDTMPFKKDTRPGVQRRHAR*QLVGSV Trigger: AACGCTACCTACCAGCTGCCACCTTGCATGCCGTCG...CTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTTTAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CCA 90 bp | GGTCCATTGACGTTTTCACAGTGGTTGCCTGAGACCATTGGAAAACACATTGTGCGGCTAGCACCTTGCTaGAGAGGAATCTGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLTFSQWLPETIGKHIVRLAPC*RGICTG Trigger: GCCAGTGCAGATTCCTCTCCAGCAAGGTGCTAGCCG...CACAATGTGTTTTCCAATGGTCTCAGGCAACCACTGTGAAAACGTCAATGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CAA 72 bp | GCTGTGTGTGACTTATGGACTAGGGCGTATCTACCCTaGGTGTCCACAGTCACCTGGCTTCACCTGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVCDLWTRAYLP*VSTVTWLHLFH Trigger: ATGAAACAGGTGAAGCCAGGTGACTGTGGACACCAAGGGTAGATACGCCCTAGTCCATAAGTCACACACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | AACTTAAACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTCAGGTCCACTGGGCTaGAAGGTTGCCACTGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NLNPDTMPFKKDTRPGVQSGPLG*KVATGY Trigger: ATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGA...CTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTTTAAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | AACCCTGATACAATGCCATTCAAAAAGGACACCAGGCCAGGAGTGCAGTTTCTGCTAGGAAGATGCAGCTaGGCTCAGAGAACTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NPDTMPFKKDTRPGVQFLLGRCS*AQRTGC Trigger: ACAGCCAGTTCTCTGAGCCCAGCTGCATCTTCCTAG...CAGAAACTGCACTCCTGGCCTGGTGTCCTTTTTGAATGGCATTGTATCAGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CAA 72 bp | TGTCCCGCTCACAGGTCACCTATAGCTGGTGGGTCATaGGAAATGGTGACATCTTACAACTCAATCCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: CPAHRSPIAGGS*EMVTSYNSIPT Trigger: CGTTGGGATTGAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATAGGTGACCTGTGAGCGGGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CAA 72 bp | GAAGGTGTACTATGCTTGAGAACGAAGCAAAGTTGGTaGGGCTGTGGTTTCCAGGAGCCCCTGAATAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVLCLRTKQSW*GCGFQEPLNRR Trigger: CCTTCTATTCAGGGGCTCCTGGAAACCACAGCCCAACCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTGATCACAGCTCTGTCATGTCAGGTAAACAGTaGAGTTCTGGGAGAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRDNGQIGTQLVSDHSSVMSGKQ*SSGRRV Trigger: CACTCTTCTCCCAGAACTTCACTGTTTACCTGACAT...GACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | GGTCCATTGACGTTTTCACAGTGGTTGCCTGAGACCATTGGAAAACACATTGTGCAGAAAGTCAGTGTCTaGAGAGAAACTGGGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLTFSQWLPETIGKHIVQKVSV*RETGGS Trigger: GGAGCCCCCAGTTTCTCTTCAGACACTGACTTTCTG...CACAATGTGTTTTCCAATGGTCTCAGGCAACCACTGTGAAAACGTCAATGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR GCA 90 bp | TATAGCTGGTGGGTCATTGGAAATGGTGACATCTTACAACTCAATCCCAACGACCTTCCTAGGGCGCTCTaGAACAGGAACAGGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSWWVIGNGDILQLNPNDLPRAL*NRNRSR Trigger: CCTACTCCTGTTCCTGTTGCAGAGCGCCCTAGGAAG...GTCGTTGGGATTGAGTTGTAAGATGTCACCATTTCCAATGACCCACCAGCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR GCA 90 bp | CTTCACATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGACTGGGCTGAAAGGTTaGCACTGGGTATCTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LHMSSVRLWLYASLRATQTGLKG*HWVSVF Trigger: GAATACAGATACCCAGTGGCAACCTTTCAGCCCAGT...CTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| 3UTR CAA 72 bp | AACCAACCAATGTCGACCCTGGAAGGTGTACTATGCTaGAGAACGAAGCAAAGTTGGTTGGGCTGTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NQPMSTLEGVLC*RTKQSWLGCGF Trigger: GAAACCACAGCCCAACCAACTTTGCTTCGTTCTCAAGCATAGTACACCTTCCAGGGTCGACATTGGTTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACTGTCTGAAGAGAAACTaGGGGCTCCACAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVTRAALLVDIQVCLKQYCLKRN*GLHRSQ Trigger: CTGGCTCCTGTGGAGCCCCCAGTTTCTCTTCAGACA...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | CTTCACATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGCTGGGCTCAGAGAACTaGCTGTACTTAATGTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LHMSSVRLWLYASLRATQLGSEN*LYLMSI Trigger: AATTGACATTAAGTACAGCCAGTTCTCTGAGCCCAG...CTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATGTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR TCA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACAACTTCATCCTTATATaGGGAGTCCCCTGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVTRAALLVDIQVCLKQYNFILI*GVPCAG Trigger: TCCAGCACAGGGGACTCCTCATATAAGGATGAAGTT...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS-3UTR CCA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACATGGTCAGTTCCTTCTaGGGACAAAGGATCAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVTRAALLVDIQVCLKQYMVSSF*GQRIKS Trigger: TGACTTGATCCTTTGTCCCCAGAAGGAACTGACCAT...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS CCA 90 bp | ACGGTGCCCAAGTCCTCAGAAAATTCCAGGCATGGGAGAGCCTCCTaGAGCCAATCCCCACAGGGCGCCTGGTCCGGCTCCTTTCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TVPKSSENSRHGRAS*SQSPQGAWSGSFRS Trigger: GGACCGAAAGGAGCCGGACCAGGCGCCCTGTGGGGATTGGCTCCAGGAGGCTCTCCCATGCCTGGAATTTTCTGAGGACTTGGGCACCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS TCA 90 bp | CCCGTGGGGACCTGCCGTGTGCGGAAGCTGCCTGTACTCGTCCTTTaGACTTGGAGTACAGGTTCAGTTTCTTCAGGCACATCAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PVGTCRVRKLPVLVL*TWSTGSVSSGTSGD Trigger: GTCCCCTGATGTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
||
| CDS GCA 90 bp | CAGGTACCGGGACTCCACCCGTGGGGACCTGCCGTGTGCGGAAGCTaGCTGTACTCGTCCTTTGAACTTGGAGTACAGGTTCAGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVPGLHPWGPAVCGS*LYSSFELGVQVQFL Trigger: AAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGTGGAGTCCCGGTACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 90 bp | AAGGTATTCCAGGTACCGGGACTCCACCCGTGGGGACCTGCCGTGTaGGGAAGCTGCCTGTACTCGTCCTTTGAACTTGGAGTACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: KVFQVPGLHPWGPAV*GSCLYSSFELGVQV Trigger: AACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGTGGAGTCCCGGTACCTGGAATACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 90 bp | CTGTCTCTTTCTGGTCCTGCCTGTAGCGTGGCTGGGTTTCTGACCTaGGGGGCTGGCCTGTTCCTTATGGTCAGTTCCTTCTGGGGACAA | + |
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Preference number: 5 (lower is better) Translates to: LSLSGPACSVAGFLT*GAGLFLMVSSFWGQ Trigger: TTGTCCCCAGAAGGAACTGACCATAAGGAACAGGCCAGCCCCTCAGGTCAGAAACCCAGCCACGCTACAGGCAGGACCAGAAAGAGACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 90 bp | CCTCTTCCTCCTCGTCCTCCTGTTCCTCCTCCCCCTCAGGATTGTTaGCCCAGCAGAAAGTCAGTGTCTGAAGAGAAACTGGGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PLPPRPPVPPPPQDC*PSRKSVSEEKLGAP Trigger: TGGAGCCCCCAGTTTCTCTTCAGACACTGACTTTCTGCTGGGTCAACAATCCTGAGGGGGAGGAGGAACAGGAGGACGAGGAGGAAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 90 bp | TCCTCCTCCCCCTCAGGATTGTTGACCCAGCAGAAAGTCAGTGTCTaGAGAGAAACTGGGGGCTCCACAGGAGCCAGATCTCTCTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: SSSPSGLLTQQKVSV*RETGGSTGARSLFE Trigger: CTCAAAGAGAGATCTGGCTCCTGTGGAGCCCCCAGTTTCTCTTCAGACACTGACTTTCTGCTGGGTCAACAATCCTGAGGGGGAGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 90 bp | CAAGTCATCAGAGAACTCAGGTCCACTGGGCTGAAAGGTTGCCACTaGGTATCTGTATTCAGAAAAGTCCAGTGCCCGGGGCGTCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: QVIRELRSTGLKGCH*VSVFRKVQCPGRLH Trigger: GTGAAGACGCCCCGGGCACTGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | CCCAGGGACAATGGGCAGATTGGAACTCAACTAGTCTCTGATCACAGCTCTGTCGGACACACCAGAGCCTaGATACCTGCACAATGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PRDNGQIGTQLVSDHSSVGHTRA*IPAQCS Trigger: GGAGCATTGTGCAGGTATCAAGGCTCTGGTGTGTCC...GACAGAGCTGTGATCAGAGACTAGTTGAGTTCCAATCTGCCCATTGTCCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 90 bp | AAGGATCAAGTCATCAGAGAACTCAGGTCCACTGGGCTGAAAGGTTaGCACTGGGTATCTGTATTCAGAAAAGTCCAGTGCCCGGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: KDQVIRELRSTGLKG*HWVSVFRKVQCPGR Trigger: ACGCCCCGGGCACTGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | CATGAGTTCTGTAAGGCTATGGCTTTATGCCAGCCTCAGAGCCACACAGCTCCGCACTGGGCTGAAAGGTaGCCACTGGGTATCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: HEFCKAMALCQPQSHTAPHWAER*PLGICI Trigger: AATACAGATACCCAGTGGCAACCTTTCAGCCCAGTG...CGGAGCTGTGTGGCTCTGAGGCTGGCATAAAGCCATAGCCTTACAGAACTCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 90 bp | CAGTTTCTTCAGGCACATCAGGGGACACACCAGAGCCTTGATACCTaGACAATGCTCCACTGGTCGCCAACCGGTTTTGATATAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QFLQAHQGTHQSLDT*TMLHWSPTGFDIAL Trigger: CAAAGCTATATCAAAACCGGTTGGCGACCAGTGGAGCATTGTGCAGGTATCAAGGCTCTGGTGTGTCCCCTGATGTGCCTGAAGAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGGCTGTGAGCTCTTTCCTGCTTCATGGTCTGTTTAGATCCTCAGCCGCAAGAGTGAGGGCATaGCCAGGACAGCTCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKGAVSSFLLHGLFRSSAARVRA*PGQLFC Trigger: ACAAAAGAGCTGTCCTGGCAATGCCCTCACTCTTGC...GGCTGAGGATCTAAACAGACCATGAAGCAGGAAAGAGCTCACAGCCCCTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 90 bp | TGGGGACAAAGGATCAAGTCATCAGAGAACTCAGGTCCACTGGGCTaGAAGGTTGCCACTGGGTATCTGTATTCAGAAAAGTCCAGTGCC | + |
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Preference number: 5 (lower is better) Translates to: WGQRIKSSENSGPLG*KVATGYLYSEKSSA Trigger: GGCACTGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCTTTGTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | GAAGTCACTAGGGCAGCCTTGCTAGTTGACATCCAAGTTTGTTTGAAACAATACGCCAGGACAGCTCTTTaGTCCCCTGGAGCCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EVTRAALLVDIQVCLKQYARTAL*SPGASR Trigger: CCTAGAGGCTCCAGGGGACAAAAGAGCTGTCCTGGC...GTATTGTTTCAAACAAACTTGGATGTCAACTAGCAAGGCTGCCCTAGTGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 90 bp | CCTTCTGGGGACAAAGGATCAAGTCATCAGAGAACTCAGGTCCACTaGGCTGAAAGGTTGCCACTGGGTATCTGTATTCAGAAAAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGDKGSSHQRTQVH*AERLPLGICIQKSP Trigger: TGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCTTTGTCCCCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | AAATGGGGTGACCTAGAGGGCAGACAGGTTGGAAGGTCGATGTCTTATCACTCTACTCGTCCTTTGAACTaGGAGTACAGGTTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KWGDLEGRQVGRSMSYHSTRPLN*EYRFSF Trigger: GAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGT...AGAGTGATAAGACATCGACCTTCCAACCTGTCTGCCCTCTAGGTCACCCCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS-3UTR CAA 90 bp | CCAATGCTGTCATCACCATCATTTCCAAGGATTCCTGACAGAGCATCCTCCGTGGGTTTTGATATAGCTTaGGTAGGTCACGAAATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PMLSSPSFPRIPDRASSVGFDIA*VGHEIG Trigger: ACCTATTTCGTGACCTACCAAAGCTATATCAAAACC...CACGGAGGATGCTCTGTCAGGAATCCTTGGAAATGATGGTGATGACAGCATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | CAGCATCCGGCCCCTGACCTCCGTCCTCTGCACGCTTaGAGTGCCCCAACAGCCGGCATTGCTGCCCTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHPAPDLRPLHA*SAPTAGIAALR Trigger: CCTAAGGGCAGCAATGCCGGCTGTTGGGGCACTTCAAGCGTGCAGAGGACGGAGGTCAGGGGCCGGATGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | GGTTCTGGCGCTGAGGCAGTGGCGTCGGCTAGCACCTaGCTGGAGAGGAATCTGCACTGGCTGGCCATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GSGAEAVASAST*LERNLHWLAIG Trigger: CCCTATGGCCAGCCAGTGCAGATTCCTCTCCAGCAAGGTGCTAGCCGACGCCACTGCCTCAGCGCCAGAACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 72 bp | CAGGTACCGGGACTCCACCCGTGGGGACCTGCCGTGTaGGGAAGCTGCCTGTACTCGTCCTTTGAACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QVPGLHPWGPAV*GSCLYSSFELG Trigger: TCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGTGGAGTCCCGGTACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | GGTATAGACGGTTCTGGCGCTGAGGCAGTGGCGTCGGCTAGCACCTaGCTGGAGAGGAATCTGCACTGGCTGGCCATAGGGAGTGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GIDGSGAEAVASAST*LERNLHWLAIGSVR Trigger: CCTGACACTCCCTATGGCCAGCCAGTGCAGATTCCTCTCCAGCAAGGTGCTAGCCGACGCCACTGCCTCAGCGCCAGAACCGTCTATACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | GTCAAAAAGGTATTCCAGGTACCGGGACTCCACCCGTaGGGACCTGCCGTGTGCGGAAGCTGCCTGTACTCG | + |
|
Preference number: 6 (lower is better) Translates to: VKKVFQVPGLHP*GPAVCGSCLYS Trigger: CGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGTGGAGTCCCGGTACCTGGAATACCTTTTTGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | TTCCACGGTGCCCAAGTCCTCAGAAAATTCCAGGCATaGGAGAGCCTCCTGGAGCCAATCCCCACAGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: FHGAQVLRKFQA*ESLLEPIPTGR Trigger: GCGCCCTGTGGGGATTGGCTCCAGGAGGCTCTCCCATGCCTGGAATTTTCTGAGGACTTGGGCACCGTGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | AGTGCCCCAACAGCCGGCATTGCTGCCCTTAGGTTCTaGTTCCCAGTCTTCCTCCTCCTCCTCCTCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SAPTAGIAALRF*FPVFLLLLLLL Trigger: GAGGAGGAGGAGGAGGAGGAGGAAGACTGGGAATCAGAACCTAAGGGCAGCAATGCCGGCTGTTGGGGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 72 bp | GGACTCCACCCGTGGGGACCTGCCGTGTGCGGAAGCTaGCTGTACTCGTCCTTTGAACTTGGAGTACAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GLHPWGPAVCGS*LYSSFELGVQV Trigger: AACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGTGGAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS GCA 72 bp | ACCCGGAGAGGCCATCCTTCAGAGGCTCTTCCACGGTaGCCAAGTCCTCAGAAAATTCCAGGCATGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TRRGHPSEALPR*PSPQKIPGMGE Trigger: CTCTCCCATGCCTGGAATTTTCTGAGGACTTGGGCACCGTGGAAGAGCCTCTGAAGGATGGCCTCTCCGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | GTCCTCTGCACGCTTGAAGTGCCCCAACAGCCGGCATaGCTGCCCTTAGGTTCTGATTCCCAGTCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLCTLEVPQQPA*LPLGSDSQSSS Trigger: GGAGGAAGACTGGGAATCAGAACCTAAGGGCAGCAATGCCGGCTGTTGGGGCACTTCAAGCGTGCAGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | GGGGACCTGCCGTGTGCGGAAGCTGCCTGTACTCGTCCTTTGAACTaGGAGTACAGGTTCAGTTTCTTCAGGCACATCAGGGGACACACC | + |
|
Preference number: 6 (lower is better) Translates to: GDLPCAEAACTRPLN*EYRFSFFRHIRGHT Trigger: GGTGTGTCCCCTGATGTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | ACCCGTGGGGACCTGCCGTGTGCGGAAGCTGCCTGTACTCGTCCTTaGAACTTGGAGTACAGGTTCAGTTTCTTCAGGCACATCAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRGDLPCAEAACTRP*NLEYRFSFFRHIRG Trigger: TCCCCTGATGTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTCCCCACGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | GTTTCTTCAGGCACATCAGGGGACACACCAGAGCCTTaGTACCTGCACAATGCTCCACTGGTCGCCAACCGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSGTSGDTPEP*YLHNAPLVANR Trigger: CCGGTTGGCGACCAGTGGAGCATTGTGCAGGTATCAAGGCTCTGGTGTGTCCCCTGATGTGCCTGAAGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | AGGGCGCCTGGTCCGGCTCCTTTCGGTCCAAACAGCTaGAAGACCCAACTTCATCCTTATATGAGGAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: RAPGPAPFGPNS*KTQLHPYMRSP Trigger: GGGACTCCTCATATAAGGATGAAGTTGGGTCTTCCAGCTGTTTGGACCGAAAGGAGCCGGACCAGGCGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | GCTATCAGTAGAAGCAAGAGTGAGGGCATTGCCAGGACAGCTCTTTaGTCCCCTGGAGCCTCTAGGAAGATGCAGCTGGGCTCAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: AISRSKSEGIARTAL*SPGASRKMQLGSEN Trigger: GTTCTCTGAGCCCAGCTGCATCTTCCTAGAGGCTCCAGGGGACAAAAGAGCTGTCCTGGCAATGCCCTCACTCTTGCTTCTACTGATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | GTGTCTGAAGAGAAACTGGGGGCTCCACAGGAGCCAGATCTCTCTTaGAGGATAAGGAACCAGAAATCCTCCACCCGGAGAGGCCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: VSEEKLGAPQEPDLS*RIRNQKSSTRRGHP Trigger: AGGATGGCCTCTCCGGGTGGAGGATTTCTGGTTCCTTATCCTCAAAGAGAGATCTGGCTCCTGTGGAGCCCCCAGTTTCTCTTCAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | AGAGAACTCAGGTCCACTGGGCTGAAAGGTTGCCACTaGGTATCTGTATTCAGAAAAGTCCAGTGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RELRSTGLKGCH*VSVFRKVQCPG Trigger: CCCCGGGCACTGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | GACCTGCCGTGTGCGGAAGCTGCCTGTACTCGTCCTTaGAACTTGGAGTACAGGTTCAGTTTCTTCAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: DLPCAEAACTRP*NLEYRFSFFRH Trigger: GTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | CAACGGCTGCTATCAGTAGAAGCAAGAGTGAGGGCATaGCCAGGACAGCTCTTTTGTCCCCTGGAGCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: QRLLSVEARVRA*PGQLFCPLEPL Trigger: TAGAGGCTCCAGGGGACAAAAGAGCTGTCCTGGCAATGCCCTCACTCTTGCTTCTACTGATAGCAGCCGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | GAGAAACTGGGGGCTCCACAGGAGCCAGATCTCTCTTaGAGGATAAGGAACCAGAAATCCTCCACCCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EKLGAPQEPDLS*RIRNQKSSTRR Trigger: TCTCCGGGTGGAGGATTTCTGGTTCCTTATCCTCAAAGAGAGATCTGGCTCCTGTGGAGCCCCCAGTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | ACCTGCCGTGTGCGGAAGCTGCCTGTACTCGTCCTTTaGACTTGGAGTACAGGTTCAGTTTCTTCAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: TCRVRKLPVLVL*TWSTGSVSSGT Trigger: TGTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | GATATAGCTTTGGTAGGTCACGAAATAGGTCACATTTaGGGGGCTCCCAAGCCCCGGAAGCCATGTCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: DIALVGHEIGHI*GAPKPRKPCQV Trigger: TACCTGACATGGCTTCCGGGGCTTGGGAGCCCCCCAAATGTGACCTATTTCGTGACCTACCAAAGCTATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 72 bp | CCGTGTGCGGAAGCTGCCTGTACTCGTCCTTTGAACTaGGAGTACAGGTTCAGTTTCTTCAGGCACATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCAEAACTRPLN*EYRFSFFRHIR Trigger: CCTGATGTGCCTGAAGAAACTGAACCTGTACTCCAAGTTCAAAGGACGAGTACAGGCAGCTTCCGCACACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CAA 90 bp | AAAGGATCAAGTCATCAGAGAACTCAGGTCCACTGGGCTGAAAGGTaGCCACTGGGTATCTGTATTCAGAAAAGTCCAGTGCCCGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KGSSHQRTQVHWAER*PLGICIQKSPVPGA Trigger: CGCCCCGGGCACTGGACTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS CCA 72 bp | GACAAAGGATCAAGTCATCAGAGAACTCAGGTCCACTaGGCTGAAAGGTTGCCACTGGGTATCTGTATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DKGSSHQRTQVH*AERLPLGICIQ Trigger: CTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCTTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | TACCTGCACAATGCTCCACTGGTCGCCAACCGGTTTTaGTATAGCTTTGGTAGGTCACGAAATAGGTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: YLHNAPLVANRF*YSFGRSRNRSH Trigger: ATGTGACCTATTTCGTGACCTACCAAAGCTATATCAAAACCGGTTGGCGACCAGTGGAGCATTGTGCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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| CDS TCA 72 bp | AGGATCAAGTCATCAGAGAACTCAGGTCCACTGGGCTaGAAGGTTGCCACTGGGTATCTGTATTCAGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: RIKSSENSGPLG*KVATGYLYSEK Trigger: CTTTTCTGAATACAGATACCCAGTGGCAACCTTTCAGCCCAGTGGACCTGAGTTCTCTGATGACTTGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074408.7 |
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